Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265440 | XP_013458523.1 | 98.933 | 375 | 4 | 0 | 1 | 375 | 1 | 375 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265440 | sp|Q9Y2D8|ADIP_HUMAN | 25.956 | 366 | 232 | 10 | 10 | 348 | 45 | 398 | 3.17e-27 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265440 | A0A072URX3 | 98.933 | 375 | 4 | 0 | 1 | 375 | 1 | 375 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0057610 | Msa1265440 | 0.811594 | 6.474255e-51 | -8.615850e-47 |
| Msa0094580 | Msa1265440 | 0.920683 | 9.374302e-88 | -8.615850e-47 |
| Msa0103240 | Msa1265440 | 0.818437 | 1.961218e-52 | -8.615850e-47 |
| Msa0666230 | Msa1265440 | 0.803779 | 2.962366e-49 | -8.615850e-47 |
| Msa1265440 | Msa1363330 | 0.804842 | 1.779239e-49 | -8.615850e-47 |
| Msa1265440 | Msa1386600 | 0.804636 | 1.964406e-49 | -8.615850e-47 |
| Msa1265440 | Msa1386710 | 0.811723 | 6.071378e-51 | -8.615850e-47 |
| Msa0443390 | Msa1265440 | 0.809451 | 1.879727e-50 | -8.615850e-47 |
| Msa1019240 | Msa1265440 | 0.801129 | 1.041632e-48 | -8.615850e-47 |
| Msa0277450 | Msa1265440 | 0.812216 | 4.740712e-51 | -8.615850e-47 |
| Msa1221110 | Msa1265440 | 0.930876 | 8.634528e-94 | -8.615850e-47 |
| Msa0519130 | Msa1265440 | 0.803143 | 4.011885e-49 | -8.615850e-47 |
| Msa0526540 | Msa1265440 | 0.808330 | 3.265092e-50 | -8.615850e-47 |
| Msa0527150 | Msa1265440 | 0.810368 | 1.193684e-50 | -8.615850e-47 |
| Msa0576940 | Msa1265440 | 0.809262 | 2.063582e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265440 | MtrunA17_Chr4g0072331 | 98.933 | 375 | 4 | 0 | 1 | 375 | 1 | 375 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265440 | AT5G57410.1 | 79.255 | 376 | 72 | 3 | 1 | 373 | 1 | 373 | 0.0 | 597 |
| Msa1265440 | AT5G57410.3 | 78.836 | 378 | 74 | 3 | 1 | 375 | 1 | 375 | 0.0 | 597 |
| Msa1265440 | AT2G18876.1 | 76.676 | 373 | 86 | 1 | 4 | 375 | 6 | 378 | 0.0 | 577 |
| Msa1265440 | AT5G57410.2 | 82.388 | 335 | 54 | 2 | 42 | 373 | 1 | 333 | 0.0 | 550 |
| Msa1265440 | AT2G18876.2 | 77.857 | 280 | 62 | 0 | 96 | 375 | 1 | 280 | 2.75e-156 | 441 |
Find 95 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTAAGTTTAACTATAT+TGG | 0.195896 | 8_2:+69796105 | Msa1265440:three_prime_UTR |
| TAGCAGAAAATGCTGATTTA+AGG | 0.209461 | 8_2:+69793135 | Msa1265440:CDS |
| ACTTGCATGACATTTAAAAT+TGG | 0.254868 | 8_2:+69796337 | Msa1265440:three_prime_UTR |
| CTGAAGGAGACTTAGATCTT+AGG | 0.266475 | 8_2:+69791447 | Msa1265440:CDS |
| ATTCGCCGATGTAAACAATT+TGG | 0.268664 | 8_2:+69791673 | Msa1265440:CDS |
| CTTTCTGAGCATCTTGCAAT+TGG | 0.281888 | 8_2:-69794330 | None:intergenic |
| CCCCTTAGTTCTTATGTAAC+AGG | 0.287649 | 8_2:+69796194 | Msa1265440:three_prime_UTR |
| GAATTTCAGAGGATGGTTAT+TGG | 0.312259 | 8_2:+69792426 | Msa1265440:CDS |
| CTATCTAATATCTATGTCTT+TGG | 0.318348 | 8_2:-69791360 | None:intergenic |
| GGAGATAATGAATTTGCTTC+AGG | 0.322573 | 8_2:+69792834 | Msa1265440:CDS |
| GAGGATGGTTATTGGTAATC+AGG | 0.324855 | 8_2:+69792434 | Msa1265440:CDS |
| CTAAGATCTAAGTCTCCTTC+AGG | 0.332420 | 8_2:-69791446 | None:intergenic |
| TCTCATTCTGCTTTCACAAC+CGG | 0.335124 | 8_2:+69791553 | Msa1265440:CDS |
| AGCAAAGATGGCTTCTATAA+AGG | 0.358500 | 8_2:+69794195 | Msa1265440:CDS |
| TTTCATTAGTAATGGGAGAT+TGG | 0.375196 | 8_2:-69793993 | None:intergenic |
| GATCGGTGCTAAAGCAAGTT+AGG | 0.379032 | 8_2:+69792554 | Msa1265440:intron |
| AACCAATCACTCGTTACATT+TGG | 0.384759 | 8_2:+69791716 | Msa1265440:CDS |
| AAAGGAATACATTAAGTTGC+AGG | 0.407699 | 8_2:+69792609 | Msa1265440:CDS |
| CTCATTCTGCTTTCACAACC+GGG | 0.410022 | 8_2:+69791554 | Msa1265440:CDS |
| AATTAGTGATATTGTGATCT+TGG | 0.410326 | 8_2:+69796265 | Msa1265440:three_prime_UTR |
| AGCAGAAAATGCTGATTTAA+GGG | 0.431389 | 8_2:+69793136 | Msa1265440:CDS |
| GCTAAAGTTGAGAGGCTTGA+TGG | 0.431843 | 8_2:+69792085 | Msa1265440:CDS |
| GAGGGATGAATTTCAGAGGA+TGG | 0.437656 | 8_2:+69792419 | Msa1265440:CDS |
| GAGACTAAACCAAGTGTTGA+TGG | 0.441272 | 8_2:+69792783 | Msa1265440:CDS |
| TTGATGTTATAGATTGTTGT+CGG | 0.446064 | 8_2:+69792045 | Msa1265440:intron |
| TGAAGGAGACTTAGATCTTA+GGG | 0.451843 | 8_2:+69791448 | Msa1265440:CDS |
| GATTGGTTTGGTAGTCCGTT+AGG | 0.455596 | 8_2:-69793976 | None:intergenic |
| GGCCTGTTACATAAGAACTA+AGG | 0.461812 | 8_2:-69796196 | None:intergenic |
| GAGAATAGATCAAGTGAAGC+AGG | 0.463962 | 8_2:-69791743 | None:intergenic |
| ATGAAAGGTGGACGCTTATG+AGG | 0.465264 | 8_2:+69793094 | Msa1265440:intron |
| TCTTCTTCTCCATCAACACT+TGG | 0.465829 | 8_2:-69792792 | None:intergenic |
| AAGGAGCATTATACAAGAGC+AGG | 0.468589 | 8_2:+69794417 | Msa1265440:CDS |
| GACATTTAAAATTGGTAACT+AGG | 0.475823 | 8_2:+69796345 | Msa1265440:three_prime_UTR |
| AACCAAATGTAACGAGTGAT+TGG | 0.476259 | 8_2:-69791718 | None:intergenic |
| TTAGTAATGGGAGATTGGTT+TGG | 0.477309 | 8_2:-69793988 | None:intergenic |
| AGGCAACGTGGAACATGGAA+TGG | 0.477813 | 8_2:+69792957 | Msa1265440:CDS |
| AACATCTTGCAAAGTCTGAC+AGG | 0.478571 | 8_2:+69794885 | Msa1265440:CDS |
| TGAGATGAAGAAGAAGGAAA+AGG | 0.485631 | 8_2:+69792591 | Msa1265440:CDS |
| ATGATGAAAATAAATGAAAT+CGG | 0.487343 | 8_2:-69791314 | None:intergenic |
| TAAGATCTAAGTCTCCTTCA+GGG | 0.487351 | 8_2:-69791445 | None:intergenic |
| AGAGAGTCTAAGAGCAAAGA+TGG | 0.492833 | 8_2:+69794183 | Msa1265440:CDS |
| CCTTCACATTCTCCGATGGT+TGG | 0.509391 | 8_2:+69794030 | Msa1265440:CDS |
| TGATCTCTAGCCATGTGAAA+AGG | 0.512834 | 8_2:-69794154 | None:intergenic |
| CATAAAATACATACCTCAGC+TGG | 0.523070 | 8_2:-69795005 | None:intergenic |
| TAACTATATTGGCTCTGTAG+TGG | 0.526470 | 8_2:+69796116 | Msa1265440:three_prime_UTR |
| TTCTCCGATGGTTGGAAGAA+CGG | 0.529147 | 8_2:+69794038 | Msa1265440:CDS |
| GGCAACGTGGAACATGGAAT+GGG | 0.529540 | 8_2:+69792958 | Msa1265440:CDS |
| GCCTGTTACATAAGAACTAA+GGG | 0.536150 | 8_2:-69796195 | None:intergenic |
| GACAAGCAAGATTAGTTACA+TGG | 0.536778 | 8_2:-69796157 | None:intergenic |
| AATACATGAGATGAAGAAGA+AGG | 0.539316 | 8_2:+69792585 | Msa1265440:CDS |
| TGGAGAAGAAGAAAGAATCT+AGG | 0.539755 | 8_2:+69792803 | Msa1265440:CDS |
| GAAAGAATCTAGGTCGGGCA+TGG | 0.541566 | 8_2:+69792813 | Msa1265440:CDS |
| ATTGCAAGATGCTCAGAAAG+AGG | 0.551306 | 8_2:+69794333 | Msa1265440:CDS |
| GGCATTGTTGAGATCAATGC+AGG | 0.551330 | 8_2:+69793157 | Msa1265440:CDS |
| AAGCTCAACTTGTTGAAGCA+AGG | 0.554611 | 8_2:+69794398 | Msa1265440:CDS |
| TAACATGGCTGAGGGTACTC+AGG | 0.557067 | 8_2:+69796069 | Msa1265440:exon |
| ACAACAATGCCTTCCCCTGA+AGG | 0.557896 | 8_2:+69791431 | Msa1265440:exon |
| AAGAAGAAAGAATCTAGGTC+GGG | 0.563858 | 8_2:+69792808 | Msa1265440:CDS |
| TTGCAAAGTCTGACAGGCCA+AGG | 0.565306 | 8_2:+69794891 | Msa1265440:CDS |
| GTATGCAACTAACATGGCTG+AGG | 0.567804 | 8_2:+69796060 | Msa1265440:exon |
| CATACCGTTCTTCCAACCAT+CGG | 0.570593 | 8_2:-69794042 | None:intergenic |
| TTGAAATATGAAGGAGCGCA+TGG | 0.571327 | 8_2:+69794306 | Msa1265440:intron |
| AAGGGAGGCAACGTGGAACA+TGG | 0.578914 | 8_2:+69792952 | Msa1265440:CDS |
| TCTAAGTCTCCTTCAGGGGA+AGG | 0.580264 | 8_2:-69791440 | None:intergenic |
| ATGTTCCAAATTGTTTACAT+CGG | 0.582928 | 8_2:-69791678 | None:intergenic |
| TAATCCTTCACATTCTCCGA+TGG | 0.586438 | 8_2:+69794026 | Msa1265440:CDS |
| GTGAAAGCAGAATGAGAAGA+TGG | 0.586466 | 8_2:-69791547 | None:intergenic |
| CAGGGAATCGGCACCAGCTG+AGG | 0.589223 | 8_2:+69794992 | Msa1265440:intron |
| GAAAGAGGCAGAAGTCACTT+CGG | 0.590207 | 8_2:+69794348 | Msa1265440:CDS |
| TGTGGTAGGTTTCTATAGCA+AGG | 0.590695 | 8_2:+69791861 | Msa1265440:intron |
| TCTATGTCTTTGGCTTTAAG+CGG | 0.591332 | 8_2:-69791350 | None:intergenic |
| TTATGTAACAGGCCATCGTA+TGG | 0.600689 | 8_2:+69796205 | Msa1265440:three_prime_UTR |
| GATGTGCATAAACAGAAGGA+AGG | 0.605299 | 8_2:+69792933 | Msa1265440:intron |
| CAGGGAGTATGCAACTAACA+TGG | 0.608511 | 8_2:+69796054 | Msa1265440:intron |
| AAAAGTTATTAATGTCTCGA+GGG | 0.611410 | 8_2:+69796306 | Msa1265440:three_prime_UTR |
| AGAATAGATCAAGTGAAGCA+GGG | 0.616733 | 8_2:-69791742 | None:intergenic |
| GAAGAAGAAAGAATCTAGGT+CGG | 0.617695 | 8_2:+69792807 | Msa1265440:CDS |
| GATTTCTTAAATGCTCCTAA+CGG | 0.620088 | 8_2:+69793961 | Msa1265440:CDS |
| ATGTGCATAAACAGAAGGAA+GGG | 0.622972 | 8_2:+69792934 | Msa1265440:intron |
| AAGAGAGGGATGAATTTCAG+AGG | 0.623845 | 8_2:+69792415 | Msa1265440:CDS |
| CTGTTACATAAGAACTAAGG+GGG | 0.635206 | 8_2:-69796193 | None:intergenic |
| CCAACCATCGGAGAATGTGA+AGG | 0.644590 | 8_2:-69794030 | None:intergenic |
| GATACGAGGCTAAAGTTGAG+AGG | 0.644683 | 8_2:+69792077 | Msa1265440:CDS |
| GATCTTGGAAGTGCTTCTAG+AGG | 0.648115 | 8_2:+69796280 | Msa1265440:three_prime_UTR |
| AAGATCTAAGTCTCCTTCAG+GGG | 0.653936 | 8_2:-69791444 | None:intergenic |
| ACAAGCAAGATTAGTTACAT+GGG | 0.661523 | 8_2:-69796156 | None:intergenic |
| TGCATAAACAGAAGGAAGGG+AGG | 0.662009 | 8_2:+69792937 | Msa1265440:intron |
| CAGAAGGAAGGGAGGCAACG+TGG | 0.662298 | 8_2:+69792945 | Msa1265440:intron |
| AATGACATTCGACCATACGA+TGG | 0.672330 | 8_2:-69796217 | None:intergenic |
| GATAGCGACGATAACTAGAA+CGG | 0.680604 | 8_2:+69792132 | Msa1265440:CDS |
| CCTGTTACATAAGAACTAAG+GGG | 0.690405 | 8_2:-69796194 | None:intergenic |
| TATGCAACTAACATGGCTGA+GGG | 0.693043 | 8_2:+69796061 | Msa1265440:exon |
| GTCGGATATATCAAGATACG+AGG | 0.705974 | 8_2:+69792063 | Msa1265440:CDS |
| TGTTACATAAGAACTAAGGG+GGG | 0.728256 | 8_2:-69796192 | None:intergenic |
| CTGCGAATGAACAAAGACAA+CGG | 0.734178 | 8_2:+69791945 | Msa1265440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAGTTTATAATGATA+GGG | - | chr8_2:69793032-69793051 | None:intergenic | 10.0% |
| !! | AATATAAAGTTTATAATGAT+AGG | - | chr8_2:69793033-69793052 | None:intergenic | 10.0% |
| !!! | TATTTTATTTTGTAATGATT+AGG | + | chr8_2:69795159-69795178 | Msa1265440:intron | 10.0% |
| !!! | ATTTTATTTTGTAATGATTA+GGG | + | chr8_2:69795160-69795179 | Msa1265440:intron | 10.0% |
| !! | ATGATGAAAATAAATGAAAT+CGG | - | chr8_2:69791317-69791336 | None:intergenic | 15.0% |
| !! | GAAATTAAAGAAGAAAAAAA+GGG | - | chr8_2:69791497-69791516 | None:intergenic | 15.0% |
| !! | AGAAATTAAAGAAGAAAAAA+AGG | - | chr8_2:69791498-69791517 | None:intergenic | 15.0% |
| !!! | ATGATTTTAAATTATGGTTT+TGG | + | chr8_2:69792162-69792181 | Msa1265440:intron | 15.0% |
| !!! | CTAACATTATTTTGTAAATA+AGG | - | chr8_2:69792244-69792263 | None:intergenic | 15.0% |
| !! | TCATTATAAACTTTATATTC+TGG | + | chr8_2:69793034-69793053 | Msa1265440:intron | 15.0% |
| !! | TTTATTATAATAATGAAAGG+TGG | + | chr8_2:69793082-69793101 | Msa1265440:intron | 15.0% |
| !!! | TTCATAAATTTTTTATGCTT+TGG | + | chr8_2:69793444-69793463 | Msa1265440:intron | 15.0% |
| !!! | TCATAAATTTTTTATGCTTT+GGG | + | chr8_2:69793445-69793464 | Msa1265440:intron | 15.0% |
| !! | TATAAATTCTTTAATGCATT+TGG | + | chr8_2:69793640-69793659 | Msa1265440:intron | 15.0% |
| !! | ATAAATTCTTTAATGCATTT+GGG | + | chr8_2:69793641-69793660 | Msa1265440:intron | 15.0% |
| !!! | ATTTACTTTTTGAATTTTAC+AGG | + | chr8_2:69794973-69794992 | Msa1265440:intron | 15.0% |
| !!! | TTTACTTTTTGAATTTTACA+GGG | + | chr8_2:69794974-69794993 | Msa1265440:intron | 15.0% |
| !! | ATGATTAAGTTTAACTATAT+TGG | + | chr8_2:69796105-69796124 | Msa1265440:three_prime_UTR | 15.0% |
| !! | ATCAAAGATCAAAATTCTTA+CGG | - | chr8_2:69791777-69791796 | None:intergenic | 20.0% |
| !!! | TTTGTTCTTGTTTTTGAAAA+TGG | + | chr8_2:69791823-69791842 | Msa1265440:intron | 20.0% |
| !! | TATCAATCTTACTATTTGAT+CGG | + | chr8_2:69792537-69792556 | Msa1265440:intron | 20.0% |
| !! | ATTAGACTTAGAAATATGAA+AGG | + | chr8_2:69792738-69792757 | Msa1265440:intron | 20.0% |
| !! | ATTTATGAATGAAATGAGAA+CGG | - | chr8_2:69793433-69793452 | None:intergenic | 20.0% |
| !!! | CATAAATTTTTTATGCTTTG+GGG | + | chr8_2:69793446-69793465 | Msa1265440:intron | 20.0% |
| !! | TAAATTCTTTAATGCATTTG+GGG | + | chr8_2:69793642-69793661 | Msa1265440:intron | 20.0% |
| !! | CAAAATAAAAATTACAACGA+TGG | - | chr8_2:69793814-69793833 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTTATTTTGCGT+AGG | + | chr8_2:69793817-69793836 | Msa1265440:intron | 20.0% |
| !!! | TCAGATTTTTCATTAGTAAT+GGG | - | chr8_2:69794003-69794022 | None:intergenic | 20.0% |
| !!! | TTCAGATTTTTCATTAGTAA+TGG | - | chr8_2:69794004-69794023 | None:intergenic | 20.0% |
| !! | TAACAAACTCATAAATTTCA+TGG | - | chr8_2:69794112-69794131 | None:intergenic | 20.0% |
| !! | ATATATGAATTGTTTGTGTT+TGG | + | chr8_2:69794265-69794284 | Msa1265440:intron | 20.0% |
| !!! | AAACTAAATTGCTATTGAAT+TGG | + | chr8_2:69794609-69794628 | Msa1265440:intron | 20.0% |
| !! | GAAAATAAGATACATGTTTA+GGG | - | chr8_2:69794697-69794716 | None:intergenic | 20.0% |
| !! | TGAAAATAAGATACATGTTT+AGG | - | chr8_2:69794698-69794717 | None:intergenic | 20.0% |
| !! | CAAATTCACACTATAAAATT+AGG | - | chr8_2:69795090-69795109 | None:intergenic | 20.0% |
| !!! | ATTTTATAGTGTGAATTTGT+TGG | + | chr8_2:69795091-69795110 | Msa1265440:intron | 20.0% |
| !!! | CTTTAAAGAACATTAGAAAT+GGG | + | chr8_2:69795655-69795674 | Msa1265440:intron | 20.0% |
| !!! | CAATTTTACCATATTATTAC+AGG | - | chr8_2:69795938-69795957 | None:intergenic | 20.0% |
| ! | CTATCTAATATCTATGTCTT+TGG | - | chr8_2:69791363-69791382 | None:intergenic | 25.0% |
| ! | AAGAAAAAATGAGACAGTTA+GGG | - | chr8_2:69791523-69791542 | None:intergenic | 25.0% |
| ! | AAAGAAAAAATGAGACAGTT+AGG | - | chr8_2:69791524-69791543 | None:intergenic | 25.0% |
| ! | ATGTTCCAAATTGTTTACAT+CGG | - | chr8_2:69791681-69791700 | None:intergenic | 25.0% |
| ! | TCAAAGATCAAAATTCTTAC+GGG | - | chr8_2:69791776-69791795 | None:intergenic | 25.0% |
| !!! | GGTTCAATTTTGATATCATT+AGG | + | chr8_2:69791973-69791992 | Msa1265440:intron | 25.0% |
| ! | TTGATGTTATAGATTGTTGT+CGG | + | chr8_2:69792045-69792064 | Msa1265440:intron | 25.0% |
| !! | GAGGCAATGATTTTAAATTA+TGG | + | chr8_2:69792156-69792175 | Msa1265440:intron | 25.0% |
| !!! | CTTTTGTTGTTTAATGTGAA+TGG | + | chr8_2:69792646-69792665 | Msa1265440:intron | 25.0% |
| !! | GTTTAATGTGAATGGTATTT+TGG | + | chr8_2:69792654-69792673 | Msa1265440:intron | 25.0% |
| ! | TTTCTAAGTCTAATAACTTG+CGG | - | chr8_2:69792732-69792751 | None:intergenic | 25.0% |
| !! | TCGTGAATTTTGTGATAATT+TGG | + | chr8_2:69792903-69792922 | Msa1265440:intron | 25.0% |
| ! | AAGGAAAATCAATGAAACAT+GGG | - | chr8_2:69793260-69793279 | None:intergenic | 25.0% |
| !! | ATTTGGGGAACTAATTATTT+TGG | + | chr8_2:69793657-69793676 | Msa1265440:intron | 25.0% |
| ! | CAATAATAACTAAATGGAAC+CGG | + | chr8_2:69793714-69793733 | Msa1265440:intron | 25.0% |
| ! | AATAATAACTAAATGGAACC+GGG | + | chr8_2:69793715-69793734 | Msa1265440:intron | 25.0% |
| ! | AACATGAACTCTAATAAATC+TGG | + | chr8_2:69793749-69793768 | Msa1265440:intron | 25.0% |
| ! | TGGGTATTATTATAGAACAA+CGG | - | chr8_2:69793868-69793887 | None:intergenic | 25.0% |
| ! | ACTTACAAATCTCATAATCT+AGG | - | chr8_2:69793916-69793935 | None:intergenic | 25.0% |
| !!! | TTTGTAAGTGTATTGATTAC+AGG | + | chr8_2:69793927-69793946 | Msa1265440:intron | 25.0% |
| ! | TATATGCAAGTACTTAATGA+TGG | - | chr8_2:69794250-69794269 | None:intergenic | 25.0% |
| !! | ATTTTGCATCATAGTAAAAC+AGG | - | chr8_2:69794496-69794515 | None:intergenic | 25.0% |
| !! | CATAAAGAACTAATTTGCAT+TGG | - | chr8_2:69794579-69794598 | None:intergenic | 25.0% |
| !!! | ATTGAATTGGTGTTTCTTTT+AGG | + | chr8_2:69794622-69794641 | Msa1265440:intron | 25.0% |
| !! | TTTTGAATTTTACAGGGAAT+CGG | + | chr8_2:69794980-69794999 | Msa1265440:intron | 25.0% |
| ! | ACTAATAGGAAAATTTATCC+AGG | - | chr8_2:69795362-69795381 | None:intergenic | 25.0% |
| ! | TACAACTTAATTAGCATGAT+AGG | + | chr8_2:69795465-69795484 | Msa1265440:intron | 25.0% |
| ! | TCACAAAACGTTAAAAAGTT+AGG | - | chr8_2:69795503-69795522 | None:intergenic | 25.0% |
| !!! | GCTTTAAAGAACATTAGAAA+TGG | + | chr8_2:69795654-69795673 | Msa1265440:intron | 25.0% |
| !! | ATGATCATATTGGTAGTAAT+TGG | + | chr8_2:69795909-69795928 | Msa1265440:intron | 25.0% |
| ! | ATCTACTTCTAAATGTAAAG+TGG | - | chr8_2:69795967-69795986 | None:intergenic | 25.0% |
| !! | ATTGTTCTTTTCTGATTTAC+AGG | + | chr8_2:69796035-69796054 | Msa1265440:intron | 25.0% |
| !! | TTGTTCTTTTCTGATTTACA+GGG | + | chr8_2:69796036-69796055 | Msa1265440:intron | 25.0% |
| ! | AATTAGTGATATTGTGATCT+TGG | + | chr8_2:69796265-69796284 | Msa1265440:three_prime_UTR | 25.0% |
| ! | AAAAAGTTATTAATGTCTCG+AGG | + | chr8_2:69796305-69796324 | Msa1265440:three_prime_UTR | 25.0% |
| ! | AAAAGTTATTAATGTCTCGA+GGG | + | chr8_2:69796306-69796325 | Msa1265440:three_prime_UTR | 25.0% |
| !! | ACTTGCATGACATTTAAAAT+TGG | + | chr8_2:69796337-69796356 | Msa1265440:three_prime_UTR | 25.0% |
| !! | GACATTTAAAATTGGTAACT+AGG | + | chr8_2:69796345-69796364 | Msa1265440:three_prime_UTR | 25.0% |
| !!! | GGTGTTTCTTTGTTTTTGTT+GGG | - | chr8_2:69791296-69791315 | None:intergenic | 30.0% |
| AGAGAGAATTGAAGATGATA+GGG | - | chr8_2:69791591-69791610 | None:intergenic | 30.0% | |
| AAGAGAGAATTGAAGATGAT+AGG | - | chr8_2:69791592-69791611 | None:intergenic | 30.0% | |
| !!! | TGGTGTTGTTTTTGAAAATG+TGG | + | chr8_2:69791843-69791862 | Msa1265440:intron | 30.0% |
| !!! | GTTGTTTTTGAAAATGTGGT+AGG | + | chr8_2:69791847-69791866 | Msa1265440:intron | 30.0% |
| !!! | TGTTTGTTTTTGCTCTTTAG+CGG | + | chr8_2:69792270-69792289 | Msa1265440:intron | 30.0% |
| ! | AAGTGTTAACTCTCTTGTTT+AGG | + | chr8_2:69792344-69792363 | Msa1265440:intron | 30.0% |
| ! | TTTTTGCAGCTTCTCAATTT+GGG | - | chr8_2:69792397-69792416 | None:intergenic | 30.0% |
| ! | CTACAACTCCTACTTTAAAA+TGG | + | chr8_2:69792498-69792517 | Msa1265440:intron | 30.0% |
| !!! | GAGCTAATCCATTTTAAAGT+AGG | - | chr8_2:69792509-69792528 | None:intergenic | 30.0% |
| AATACATGAGATGAAGAAGA+AGG | + | chr8_2:69792585-69792604 | Msa1265440:CDS | 30.0% | |
| ! | AAAGGAATACATTAAGTTGC+AGG | + | chr8_2:69792609-69792628 | Msa1265440:CDS | 30.0% |
| ! | TTCTAAGTCTAATAACTTGC+GGG | - | chr8_2:69792731-69792750 | None:intergenic | 30.0% |
| !! | TAGCAGAAAATGCTGATTTA+AGG | + | chr8_2:69793135-69793154 | Msa1265440:CDS | 30.0% |
| !! | AGCAGAAAATGCTGATTTAA+GGG | + | chr8_2:69793136-69793155 | Msa1265440:CDS | 30.0% |
| AGGAAAATCAATGAAACATG+GGG | - | chr8_2:69793259-69793278 | None:intergenic | 30.0% | |
| CAAGGAAAATCAATGAAACA+TGG | - | chr8_2:69793261-69793280 | None:intergenic | 30.0% | |
| ! | GATTTTCCTTGATGTGATTT+TGG | + | chr8_2:69793270-69793289 | Msa1265440:intron | 30.0% |
| GAAAATCCAAAATCACATCA+AGG | - | chr8_2:69793279-69793298 | None:intergenic | 30.0% | |
| TAACGTGTTCATTCTTTAAG+AGG | + | chr8_2:69793346-69793365 | Msa1265440:intron | 30.0% | |
| AAATGAGAACGGAATTAAAG+TGG | - | chr8_2:69793422-69793441 | None:intergenic | 30.0% | |
| CAAAAATTTCTCTGATGCTT+GGG | - | chr8_2:69793574-69793593 | None:intergenic | 30.0% | |
| !!! | ATCAGAGAAATTTTTGGTGT+TGG | + | chr8_2:69793578-69793597 | Msa1265440:intron | 30.0% |
| GGATGGCAATAATAACTAAA+TGG | + | chr8_2:69793708-69793727 | Msa1265440:intron | 30.0% | |
| ! | TCATGTTTTCCTTTTTTTCC+CGG | - | chr8_2:69793736-69793755 | None:intergenic | 30.0% |
| GATTTCTTAAATGCTCCTAA+CGG | + | chr8_2:69793961-69793980 | Msa1265440:CDS | 30.0% | |
| ! | TTTCATTAGTAATGGGAGAT+TGG | - | chr8_2:69793996-69794015 | None:intergenic | 30.0% |
| !! | TTTATGAGTTTGTTACTTGC+AGG | + | chr8_2:69794117-69794136 | Msa1265440:intron | 30.0% |
| ! | ATTTGATCTTCCTTTTCACA+TGG | + | chr8_2:69794144-69794163 | Msa1265440:CDS | 30.0% |
| TGTTTGTGTTTGGTTGTTAA+CGG | + | chr8_2:69794275-69794294 | Msa1265440:intron | 30.0% | |
| GCTTGAAAGTTGAAATATGA+AGG | + | chr8_2:69794297-69794316 | Msa1265440:intron | 30.0% | |
| ! | GCTATTCATCTGATGTTTTA+TGG | + | chr8_2:69794546-69794565 | Msa1265440:intron | 30.0% |
| ! | ATCTGATGTTTTATGGTGTT+TGG | + | chr8_2:69794553-69794572 | Msa1265440:intron | 30.0% |
| ! | ACTTATAAGTCCATGTCTTT+TGG | + | chr8_2:69794662-69794681 | Msa1265440:intron | 30.0% |
| GTGATAATATGTTGTATTGC+AGG | + | chr8_2:69794847-69794866 | Msa1265440:intron | 30.0% | |
| AGAAAACACTAAGAATACCT+TGG | - | chr8_2:69794911-69794930 | None:intergenic | 30.0% | |
| ! | TGTTTGTCTGTTTCATGTTT+TGG | + | chr8_2:69795032-69795051 | Msa1265440:intron | 30.0% |
| ! | GTTTGTCTGTTTCATGTTTT+GGG | + | chr8_2:69795033-69795052 | Msa1265440:intron | 30.0% |
| !! | TTATAGTGTGAATTTGTTGG+TGG | + | chr8_2:69795094-69795113 | Msa1265440:intron | 30.0% |
| CCTCGATAAACATAACTAAT+AGG | - | chr8_2:69795376-69795395 | None:intergenic | 30.0% | |
| CCTATTAGTTATGTTTATCG+AGG | + | chr8_2:69795373-69795392 | Msa1265440:intron | 30.0% | |
| GTTATGTTTATCGAGGTTAT+AGG | + | chr8_2:69795380-69795399 | Msa1265440:intron | 30.0% | |
| TTGATCTGATTAAAATCCAC+TGG | + | chr8_2:69795547-69795566 | Msa1265440:intron | 30.0% | |
| !!! | TCCAGTTTTAAAGATACAAC+TGG | + | chr8_2:69795613-69795632 | Msa1265440:intron | 30.0% |
| !! | ACCAGTTGTATCTTTAAAAC+TGG | - | chr8_2:69795617-69795636 | None:intergenic | 30.0% |
| TTCAACTATTAATGCTGACA+TGG | + | chr8_2:69795717-69795736 | Msa1265440:intron | 30.0% | |
| ATTGGAAGCCTGTAATAATA+TGG | + | chr8_2:69795927-69795946 | Msa1265440:intron | 30.0% | |
| ATTATTAATTGCGTCCCAAT+TGG | + | chr8_2:69795989-69796008 | Msa1265440:intron | 30.0% | |
| AAAGAACAATATCACAACAC+AGG | - | chr8_2:69796025-69796044 | None:intergenic | 30.0% | |
| ! | ACAAGCAAGATTAGTTACAT+GGG | - | chr8_2:69796159-69796178 | None:intergenic | 30.0% |
| !!! | GTTTCTTTGTTTTTGTTGGG+CGG | - | chr8_2:69791293-69791312 | None:intergenic | 35.0% |
| !!! | CGGTGTTTCTTTGTTTTTGT+TGG | - | chr8_2:69791297-69791316 | None:intergenic | 35.0% |
| !! | TCTATGTCTTTGGCTTTAAG+CGG | - | chr8_2:69791353-69791372 | None:intergenic | 35.0% |
| TAAGATCTAAGTCTCCTTCA+GGG | - | chr8_2:69791448-69791467 | None:intergenic | 35.0% | |
| TGAAGGAGACTTAGATCTTA+GGG | + | chr8_2:69791448-69791467 | Msa1265440:CDS | 35.0% | |
| TCTTCAATTCTCTCTTTCGT+AGG | + | chr8_2:69791596-69791615 | Msa1265440:intron | 35.0% | |
| CTTCAATTCTCTCTTTCGTA+GGG | + | chr8_2:69791597-69791616 | Msa1265440:intron | 35.0% | |
| ATTCGCCGATGTAAACAATT+TGG | + | chr8_2:69791673-69791692 | Msa1265440:CDS | 35.0% | |
| AACCAATCACTCGTTACATT+TGG | + | chr8_2:69791716-69791735 | Msa1265440:CDS | 35.0% | |
| AACCAAATGTAACGAGTGAT+TGG | - | chr8_2:69791721-69791740 | None:intergenic | 35.0% | |
| AGAATAGATCAAGTGAAGCA+GGG | - | chr8_2:69791745-69791764 | None:intergenic | 35.0% | |
| TGAACAAAGACAACGGTAAT+TGG | + | chr8_2:69791952-69791971 | Msa1265440:intron | 35.0% | |
| TCTGTGTTTGTTTGTGTGTT+TGG | + | chr8_2:69792003-69792022 | Msa1265440:intron | 35.0% | |
| !!! | TTGTTTTGGGTACAATCTAG+TGG | + | chr8_2:69792301-69792320 | Msa1265440:intron | 35.0% |
| TAAAAATACTGCAGCTCTCA+AGG | + | chr8_2:69792371-69792390 | Msa1265440:CDS | 35.0% | |
| ! | CTTTTTGCAGCTTCTCAATT+TGG | - | chr8_2:69792398-69792417 | None:intergenic | 35.0% |
| GAATTTCAGAGGATGGTTAT+TGG | + | chr8_2:69792426-69792445 | Msa1265440:CDS | 35.0% | |
| TGAGATGAAGAAGAAGGAAA+AGG | + | chr8_2:69792591-69792610 | Msa1265440:CDS | 35.0% | |
| ! | GAATACATTAAGTTGCAGGT+AGG | + | chr8_2:69792613-69792632 | Msa1265440:intron | 35.0% |
| GGGATCGTGAAATAATTCAA+TGG | - | chr8_2:69792711-69792730 | None:intergenic | 35.0% | |
| GACTTAGAAATATGAAAGGC+TGG | + | chr8_2:69792742-69792761 | Msa1265440:intron | 35.0% | |
| TGGAGAAGAAGAAAGAATCT+AGG | + | chr8_2:69792803-69792822 | Msa1265440:CDS | 35.0% | |
| GAAGAAGAAAGAATCTAGGT+CGG | + | chr8_2:69792807-69792826 | Msa1265440:CDS | 35.0% | |
| AAGAAGAAAGAATCTAGGTC+GGG | + | chr8_2:69792808-69792827 | Msa1265440:CDS | 35.0% | |
| ! | GGAGATAATGAATTTGCTTC+AGG | + | chr8_2:69792834-69792853 | Msa1265440:CDS | 35.0% |
| AACATTCAAAACTACGTGGA+TGG | - | chr8_2:69792866-69792885 | None:intergenic | 35.0% | |
| AAGCAACATTCAAAACTACG+TGG | - | chr8_2:69792870-69792889 | None:intergenic | 35.0% | |
| TTGTGATGTGCATAAACAGA+AGG | + | chr8_2:69792929-69792948 | Msa1265440:intron | 35.0% | |
| ATGTGCATAAACAGAAGGAA+GGG | + | chr8_2:69792934-69792953 | Msa1265440:intron | 35.0% | |
| ACATGGGGAAAAAAACACAT+AGG | - | chr8_2:69793244-69793263 | None:intergenic | 35.0% | |
| ! | TTCATTCTTTAAGAGGTCTC+TGG | + | chr8_2:69793353-69793372 | Msa1265440:intron | 35.0% |
| ! | TCATTCTTTAAGAGGTCTCT+GGG | + | chr8_2:69793354-69793373 | Msa1265440:intron | 35.0% |
| GATAGCATTAGAGAGAAACT+TGG | + | chr8_2:69793483-69793502 | Msa1265440:intron | 35.0% | |
| CCAAAAATTTCTCTGATGCT+TGG | - | chr8_2:69793575-69793594 | None:intergenic | 35.0% | |
| ! | CCAAGCATCAGAGAAATTTT+TGG | + | chr8_2:69793572-69793591 | Msa1265440:intron | 35.0% |
| !!! | AGAGAAATTTTTGGTGTTGG+TGG | + | chr8_2:69793581-69793600 | Msa1265440:intron | 35.0% |
| TAAATGGAACCGGGAAAAAA+AGG | + | chr8_2:69793724-69793743 | Msa1265440:intron | 35.0% | |
| GAACTCTAATAAATCTGGTC+TGG | + | chr8_2:69793754-69793773 | Msa1265440:intron | 35.0% | |
| CAACGATGGATGAAAAACAA+AGG | - | chr8_2:69793800-69793819 | None:intergenic | 35.0% | |
| !! | GTAAGTGTATTGATTACAGG+TGG | + | chr8_2:69793930-69793949 | Msa1265440:intron | 35.0% |
| ! | TTAGTAATGGGAGATTGGTT+TGG | - | chr8_2:69793991-69794010 | None:intergenic | 35.0% |
| AGCAAAGATGGCTTCTATAA+AGG | + | chr8_2:69794195-69794214 | Msa1265440:CDS | 35.0% | |
| AAACAGGATTCTAAATGCCT+TGG | - | chr8_2:69794480-69794499 | None:intergenic | 35.0% | |
| ! | TATAAGTCCATGTCTTTTGG+TGG | + | chr8_2:69794665-69794684 | Msa1265440:intron | 35.0% |
| ! | ATAAGTCCATGTCTTTTGGT+GGG | + | chr8_2:69794666-69794685 | Msa1265440:intron | 35.0% |
| TCTCTCCTTTAACAAATCCA+CGG | + | chr8_2:69794724-69794743 | Msa1265440:intron | 35.0% | |
| !! | AAAAGCCGTGGATTTGTTAA+AGG | - | chr8_2:69794732-69794751 | None:intergenic | 35.0% |
| AAGAAAGAAGAAAAAAGCCG+TGG | - | chr8_2:69794744-69794763 | None:intergenic | 35.0% | |
| TTACTGCAGCAGTACATATT+AGG | - | chr8_2:69794949-69794968 | None:intergenic | 35.0% | |
| CATAAAATACATACCTCAGC+TGG | - | chr8_2:69795008-69795027 | None:intergenic | 35.0% | |
| !!! | TCTGTTTCATGTTTTGGGTT+GGG | + | chr8_2:69795038-69795057 | Msa1265440:intron | 35.0% |
| !! | CCATGCAACAATTTTGTTTG+AGG | - | chr8_2:69795186-69795205 | None:intergenic | 35.0% |
| CCTCAAACAAAATTGTTGCA+TGG | + | chr8_2:69795183-69795202 | Msa1265440:intron | 35.0% | |
| TAAGAAACCCAAACTCAGAT+AGG | - | chr8_2:69795214-69795233 | None:intergenic | 35.0% | |
| AGAGTGCAACTTTCAAAAGA+AGG | + | chr8_2:69795423-69795442 | Msa1265440:intron | 35.0% | |
| AAATGAGTTGTTCCCACAAT+AGG | - | chr8_2:69795577-69795596 | None:intergenic | 35.0% | |
| !! | AGATACAACTGGTTTGTACT+AGG | + | chr8_2:69795624-69795643 | Msa1265440:intron | 35.0% |
| AGTGTTGTGTAGTTAAATGC+CGG | - | chr8_2:69795842-69795861 | None:intergenic | 35.0% | |
| GTATCATCGCATGATCATAT+TGG | + | chr8_2:69795899-69795918 | Msa1265440:intron | 35.0% | |
| AATATCACAACACAGGCATA+AGG | - | chr8_2:69796018-69796037 | None:intergenic | 35.0% | |
| !! | TAACTATATTGGCTCTGTAG+TGG | + | chr8_2:69796116-69796135 | Msa1265440:three_prime_UTR | 35.0% |
| ! | GACAAGCAAGATTAGTTACA+TGG | - | chr8_2:69796160-69796179 | None:intergenic | 35.0% |
| TGTTACATAAGAACTAAGGG+GGG | - | chr8_2:69796195-69796214 | None:intergenic | 35.0% | |
| CTGTTACATAAGAACTAAGG+GGG | - | chr8_2:69796196-69796215 | None:intergenic | 35.0% | |
| CCTGTTACATAAGAACTAAG+GGG | - | chr8_2:69796197-69796216 | None:intergenic | 35.0% | |
| GCCTGTTACATAAGAACTAA+GGG | - | chr8_2:69796198-69796217 | None:intergenic | 35.0% | |
| AAGATCTAAGTCTCCTTCAG+GGG | - | chr8_2:69791447-69791466 | None:intergenic | 40.0% | |
| CTAAGATCTAAGTCTCCTTC+AGG | - | chr8_2:69791449-69791468 | None:intergenic | 40.0% | |
| CTGAAGGAGACTTAGATCTT+AGG | + | chr8_2:69791447-69791466 | Msa1265440:CDS | 40.0% | |
| GTGAAAGCAGAATGAGAAGA+TGG | - | chr8_2:69791550-69791569 | None:intergenic | 40.0% | |
| TCTCATTCTGCTTTCACAAC+CGG | + | chr8_2:69791553-69791572 | Msa1265440:CDS | 40.0% | |
| GAGAATAGATCAAGTGAAGC+AGG | - | chr8_2:69791746-69791765 | None:intergenic | 40.0% | |
| TGTGGTAGGTTTCTATAGCA+AGG | + | chr8_2:69791861-69791880 | Msa1265440:intron | 40.0% | |
| CTGCGAATGAACAAAGACAA+CGG | + | chr8_2:69791945-69791964 | Msa1265440:CDS | 40.0% | |
| GTCGGATATATCAAGATACG+AGG | + | chr8_2:69792063-69792082 | Msa1265440:CDS | 40.0% | |
| GATAGCGACGATAACTAGAA+CGG | + | chr8_2:69792132-69792151 | Msa1265440:CDS | 40.0% | |
| !!! | TTGTTTTTGCTCTTTAGCGG+TGG | + | chr8_2:69792273-69792292 | Msa1265440:intron | 40.0% |
| !! | TGTTTTTGCTCTTTAGCGGT+GGG | + | chr8_2:69792274-69792293 | Msa1265440:intron | 40.0% |
| !! | TAGCGGTGGGATTTTTGTTT+TGG | + | chr8_2:69792287-69792306 | Msa1265440:intron | 40.0% |
| !!! | AGCGGTGGGATTTTTGTTTT+GGG | + | chr8_2:69792288-69792307 | Msa1265440:intron | 40.0% |
| !! | TTTTGGGTACAATCTAGTGG+TGG | + | chr8_2:69792304-69792323 | Msa1265440:intron | 40.0% |
| TTGAGAAGCTGCAAAAAGAG+AGG | + | chr8_2:69792400-69792419 | Msa1265440:CDS | 40.0% | |
| TGAGAAGCTGCAAAAAGAGA+GGG | + | chr8_2:69792401-69792420 | Msa1265440:CDS | 40.0% | |
| AAGAGAGGGATGAATTTCAG+AGG | + | chr8_2:69792415-69792434 | Msa1265440:CDS | 40.0% | |
| ! | GAGGATGGTTATTGGTAATC+AGG | + | chr8_2:69792434-69792453 | Msa1265440:CDS | 40.0% |
| ! | ATTCGTGCTGCTATATGGTA+GGG | + | chr8_2:69792679-69792698 | Msa1265440:intron | 40.0% |
| !! | GAGACTAAACCAAGTGTTGA+TGG | + | chr8_2:69792783-69792802 | Msa1265440:CDS | 40.0% |
| TCTTCTTCTCCATCAACACT+TGG | - | chr8_2:69792795-69792814 | None:intergenic | 40.0% | |
| GATGTGCATAAACAGAAGGA+AGG | + | chr8_2:69792933-69792952 | Msa1265440:intron | 40.0% | |
| ATTGTTGAGATCAATGCAGG+TGG | + | chr8_2:69793160-69793179 | Msa1265440:intron | 40.0% | |
| TTGTTGAGATCAATGCAGGT+GGG | + | chr8_2:69793161-69793180 | Msa1265440:intron | 40.0% | |
| AGCATTAGAGAGAAACTTGG+AGG | + | chr8_2:69793486-69793505 | Msa1265440:intron | 40.0% | |
| TGGAGGAAAAACCTCATGAA+TGG | + | chr8_2:69793503-69793522 | Msa1265440:intron | 40.0% | |
| AGGAAAAACCTCATGAATGG+TGG | + | chr8_2:69793506-69793525 | Msa1265440:intron | 40.0% | |
| CTCATGAATGGTGGTTGTAT+GGG | + | chr8_2:69793515-69793534 | Msa1265440:intron | 40.0% | |
| ! | AATGGTGGTTGTATGGGTTT+TGG | + | chr8_2:69793521-69793540 | Msa1265440:intron | 40.0% |
| ! | TTGGTGGTTGCATATCTCAT+TGG | + | chr8_2:69793540-69793559 | Msa1265440:intron | 40.0% |
| !! | TTGGTGATGCAAAGTCCAAT+TGG | + | chr8_2:69793676-69793695 | Msa1265440:intron | 40.0% |
| TGATGCAAAGTCCAATTGGA+CGG | + | chr8_2:69793680-69793699 | Msa1265440:intron | 40.0% | |
| CTCTAATAAATCTGGTCTGG+TGG | + | chr8_2:69793757-69793776 | Msa1265440:intron | 40.0% | |
| CTGTACTTCCTTCCTTGTAA+AGG | + | chr8_2:69793842-69793861 | Msa1265440:intron | 40.0% | |
| ATAGAACAACGGCCTTTACA+AGG | - | chr8_2:69793857-69793876 | None:intergenic | 40.0% | |
| TAATCCTTCACATTCTCCGA+TGG | + | chr8_2:69794026-69794045 | Msa1265440:CDS | 40.0% | |
| GAGTTTGACAATGCGAACAA+AGG | - | chr8_2:69794088-69794107 | None:intergenic | 40.0% | |
| TGATCTCTAGCCATGTGAAA+AGG | - | chr8_2:69794157-69794176 | None:intergenic | 40.0% | |
| AGAGAGTCTAAGAGCAAAGA+TGG | + | chr8_2:69794183-69794202 | Msa1265440:CDS | 40.0% | |
| ! | TTGAAATATGAAGGAGCGCA+TGG | + | chr8_2:69794306-69794325 | Msa1265440:intron | 40.0% |
| CTTTCTGAGCATCTTGCAAT+TGG | - | chr8_2:69794333-69794352 | None:intergenic | 40.0% | |
| ATTGCAAGATGCTCAGAAAG+AGG | + | chr8_2:69794333-69794352 | Msa1265440:CDS | 40.0% | |
| !! | AAGCTCAACTTGTTGAAGCA+AGG | + | chr8_2:69794398-69794417 | Msa1265440:CDS | 40.0% |
| !! | AAGGAGCATTATACAAGAGC+AGG | + | chr8_2:69794417-69794436 | Msa1265440:CDS | 40.0% |
| ! | AGTGCTGGATCATGCTAATT+TGG | + | chr8_2:69794796-69794815 | Msa1265440:intron | 40.0% |
| AACATCTTGCAAAGTCTGAC+AGG | + | chr8_2:69794885-69794904 | Msa1265440:CDS | 40.0% | |
| !! | GTCTGTTTCATGTTTTGGGT+TGG | + | chr8_2:69795037-69795056 | Msa1265440:intron | 40.0% |
| !! | AGTGTGAATTTGTTGGTGGT+TGG | + | chr8_2:69795098-69795117 | Msa1265440:intron | 40.0% |
| !! | GGTTGGTGGAAAAGTATCTT+TGG | + | chr8_2:69795115-69795134 | Msa1265440:intron | 40.0% |
| TGGCTAATCCTATCTGAGTT+TGG | + | chr8_2:69795203-69795222 | Msa1265440:intron | 40.0% | |
| GGCTAATCCTATCTGAGTTT+GGG | + | chr8_2:69795204-69795223 | Msa1265440:intron | 40.0% | |
| !! | TGGGAGGTTAGGATTTGTTT+TGG | + | chr8_2:69795326-69795345 | Msa1265440:intron | 40.0% |
| !! | GGGAGGTTAGGATTTGTTTT+GGG | + | chr8_2:69795327-69795346 | Msa1265440:intron | 40.0% |
| !!! | GGAGGTTAGGATTTGTTTTG+GGG | + | chr8_2:69795328-69795347 | Msa1265440:intron | 40.0% |
| !!! | GAGGTTAGGATTTGTTTTGG+GGG | + | chr8_2:69795329-69795348 | Msa1265440:intron | 40.0% |
| !!! | AGTTTTTTTGACAACCGCCA+CGG | - | chr8_2:69795798-69795817 | None:intergenic | 40.0% |
| TATGCAACTAACATGGCTGA+GGG | + | chr8_2:69796061-69796080 | Msa1265440:exon | 40.0% | |
| ! | CCCCTTAGTTCTTATGTAAC+AGG | + | chr8_2:69796194-69796213 | Msa1265440:three_prime_UTR | 40.0% |
| GGCCTGTTACATAAGAACTA+AGG | - | chr8_2:69796199-69796218 | None:intergenic | 40.0% | |
| TTATGTAACAGGCCATCGTA+TGG | + | chr8_2:69796205-69796224 | Msa1265440:three_prime_UTR | 40.0% | |
| AATGACATTCGACCATACGA+TGG | - | chr8_2:69796220-69796239 | None:intergenic | 40.0% | |
| CTCATTCTGCTTTCACAACC+GGG | + | chr8_2:69791554-69791573 | Msa1265440:CDS | 45.0% | |
| !!! | GATAGGGTTTTGAACTGACC+CGG | - | chr8_2:69791575-69791594 | None:intergenic | 45.0% |
| GATACGAGGCTAAAGTTGAG+AGG | + | chr8_2:69792077-69792096 | Msa1265440:CDS | 45.0% | |
| GCTAAAGTTGAGAGGCTTGA+TGG | + | chr8_2:69792085-69792104 | Msa1265440:CDS | 45.0% | |
| GAGGGATGAATTTCAGAGGA+TGG | + | chr8_2:69792419-69792438 | Msa1265440:CDS | 45.0% | |
| !! | GATCGGTGCTAAAGCAAGTT+AGG | + | chr8_2:69792554-69792573 | Msa1265440:intron | 45.0% |
| ! | TGGTGATTCGTGCTGCTATA+TGG | + | chr8_2:69792674-69792693 | Msa1265440:intron | 45.0% |
| ! | GATTCGTGCTGCTATATGGT+AGG | + | chr8_2:69792678-69792697 | Msa1265440:intron | 45.0% |
| ! | GGCTGGTACATTTTACTTGC+AGG | + | chr8_2:69792759-69792778 | Msa1265440:intron | 45.0% |
| TGCATAAACAGAAGGAAGGG+AGG | + | chr8_2:69792937-69792956 | Msa1265440:intron | 45.0% | |
| ATGAAAGGTGGACGCTTATG+AGG | + | chr8_2:69793094-69793113 | Msa1265440:intron | 45.0% | |
| GGCATTGTTGAGATCAATGC+AGG | + | chr8_2:69793157-69793176 | Msa1265440:CDS | 45.0% | |
| CCATACAACCACCATTCATG+AGG | - | chr8_2:69793517-69793536 | None:intergenic | 45.0% | |
| CCTCATGAATGGTGGTTGTA+TGG | + | chr8_2:69793514-69793533 | Msa1265440:intron | 45.0% | |
| GTGGTTGCATATCTCATTGG+AGG | + | chr8_2:69793543-69793562 | Msa1265440:intron | 45.0% | |
| AAGTCCAATTGGACGGAGAT+TGG | + | chr8_2:69793687-69793706 | Msa1265440:intron | 45.0% | |
| AACAACGGCCTTTACAAGGA+AGG | - | chr8_2:69793853-69793872 | None:intergenic | 45.0% | |
| !! | TTGAGTACCCTGCTTTAGAG+GGG | - | chr8_2:69793893-69793912 | None:intergenic | 45.0% |
| ! | GTTGAGTACCCTGCTTTAGA+GGG | - | chr8_2:69793894-69793913 | None:intergenic | 45.0% |
| !! | GATTGGTTTGGTAGTCCGTT+AGG | - | chr8_2:69793979-69793998 | None:intergenic | 45.0% |
| TTCTCCGATGGTTGGAAGAA+CGG | + | chr8_2:69794038-69794057 | Msa1265440:CDS | 45.0% | |
| CATACCGTTCTTCCAACCAT+CGG | - | chr8_2:69794045-69794064 | None:intergenic | 45.0% | |
| GAAAGAGGCAGAAGTCACTT+CGG | + | chr8_2:69794348-69794367 | Msa1265440:CDS | 45.0% | |
| TCTCGCAATTGCAGCAAGTT+AGG | + | chr8_2:69794453-69794472 | Msa1265440:intron | 45.0% | |
| ATTGCAGCAAGTTAGGTCCA+AGG | + | chr8_2:69794460-69794479 | Msa1265440:intron | 45.0% | |
| !! | GTGAATTTGTTGGTGGTTGG+TGG | + | chr8_2:69795101-69795120 | Msa1265440:intron | 45.0% |
| TCGATTACGCGCATGCAAAT+GGG | + | chr8_2:69795307-69795326 | Msa1265440:intron | 45.0% | |
| !! | ATCCACTGGCTTTCCTATTG+TGG | + | chr8_2:69795561-69795580 | Msa1265440:intron | 45.0% |
| !! | TCCACTGGCTTTCCTATTGT+GGG | + | chr8_2:69795562-69795581 | Msa1265440:intron | 45.0% |
| CTATCAACACCACAGAGACA+CGG | - | chr8_2:69795744-69795763 | None:intergenic | 45.0% | |
| !! | GTGTCTCTGTGGTGTTGATA+GGG | + | chr8_2:69795743-69795762 | Msa1265440:intron | 45.0% |
| !! | TGTCTCTGTGGTGTTGATAG+GGG | + | chr8_2:69795744-69795763 | Msa1265440:intron | 45.0% |
| TAGTTAAATGCCGGTCATGG+CGG | - | chr8_2:69795833-69795852 | None:intergenic | 45.0% | |
| GTGTAGTTAAATGCCGGTCA+TGG | - | chr8_2:69795836-69795855 | None:intergenic | 45.0% | |
| CAGGCATAAGGTGACCAATT+GGG | - | chr8_2:69796006-69796025 | None:intergenic | 45.0% | |
| ACAGGCATAAGGTGACCAAT+TGG | - | chr8_2:69796007-69796026 | None:intergenic | 45.0% | |
| ! | CAGGGAGTATGCAACTAACA+TGG | + | chr8_2:69796054-69796073 | Msa1265440:intron | 45.0% |
| GTATGCAACTAACATGGCTG+AGG | + | chr8_2:69796060-69796079 | Msa1265440:exon | 45.0% | |
| !! | GATCTTGGAAGTGCTTCTAG+AGG | + | chr8_2:69796280-69796299 | Msa1265440:three_prime_UTR | 45.0% |
| !! | TTATTTATTATAATAATGAA+AGG | + | chr8_2:69793079-69793098 | Msa1265440:intron | 5.0% |
| ACAACAATGCCTTCCCCTGA+AGG | + | chr8_2:69791431-69791450 | Msa1265440:exon | 50.0% | |
| TCTAAGTCTCCTTCAGGGGA+AGG | - | chr8_2:69791443-69791462 | None:intergenic | 50.0% | |
| CGACGATAACTAGAACGGTG+AGG | + | chr8_2:69792137-69792156 | Msa1265440:intron | 50.0% | |
| GAAAGAATCTAGGTCGGGCA+TGG | + | chr8_2:69792813-69792832 | Msa1265440:CDS | 50.0% | |
| AGGCAACGTGGAACATGGAA+TGG | + | chr8_2:69792957-69792976 | Msa1265440:CDS | 50.0% | |
| GGCAACGTGGAACATGGAAT+GGG | + | chr8_2:69792958-69792977 | Msa1265440:CDS | 50.0% | |
| !! | GGTGGTTGTATGGGTTTTGG+TGG | + | chr8_2:69793524-69793543 | Msa1265440:intron | 50.0% |
| !! | TGTTGGTGGTTGTTGCTGAC+TGG | + | chr8_2:69793595-69793614 | Msa1265440:intron | 50.0% |
| CCATCCAATCTCCGTCCAAT+TGG | - | chr8_2:69793694-69793713 | None:intergenic | 50.0% | |
| CCAATTGGACGGAGATTGGA+TGG | + | chr8_2:69793691-69793710 | Msa1265440:intron | 50.0% | |
| !! | TGAGTACCCTGCTTTAGAGG+GGG | - | chr8_2:69793892-69793911 | None:intergenic | 50.0% |
| GGTTGAGTACCCTGCTTTAG+AGG | - | chr8_2:69793895-69793914 | None:intergenic | 50.0% | |
| CCAACCATCGGAGAATGTGA+AGG | - | chr8_2:69794033-69794052 | None:intergenic | 50.0% | |
| CCTTCACATTCTCCGATGGT+TGG | + | chr8_2:69794030-69794049 | Msa1265440:CDS | 50.0% | |
| CGATGGTTGGAAGAACGGTA+TGG | + | chr8_2:69794043-69794062 | Msa1265440:intron | 50.0% | |
| !! | GCACTGAGCAAAGTACTGTC+AGG | - | chr8_2:69794781-69794800 | None:intergenic | 50.0% |
| GACAGTACTTTGCTCAGTGC+TGG | + | chr8_2:69794781-69794800 | Msa1265440:intron | 50.0% | |
| TTGCAAAGTCTGACAGGCCA+AGG | + | chr8_2:69794891-69794910 | Msa1265440:CDS | 50.0% | |
| GTCGATTACGCGCATGCAAA+TGG | + | chr8_2:69795306-69795325 | Msa1265440:intron | 50.0% | |
| ATTACGCGCATGCAAATGGG+AGG | + | chr8_2:69795310-69795329 | Msa1265440:intron | 50.0% | |
| !!! | TGTTTTGGGGGTCTTACTCC+TGG | + | chr8_2:69795341-69795360 | Msa1265440:intron | 50.0% |
| TCCCACAATAGGAAAGCCAG+TGG | - | chr8_2:69795566-69795585 | None:intergenic | 50.0% | |
| ATTCCTCTGCTAGCAGCAGA+AGG | + | chr8_2:69795692-69795711 | Msa1265440:intron | 50.0% | |
| TTCCTCTGCTAGCAGCAGAA+GGG | + | chr8_2:69795693-69795712 | Msa1265440:intron | 50.0% | |
| !! | CGTGTCTCTGTGGTGTTGAT+AGG | + | chr8_2:69795742-69795761 | Msa1265440:intron | 50.0% |
| !! | TAACATGGCTGAGGGTACTC+AGG | + | chr8_2:69796069-69796088 | Msa1265440:exon | 50.0% |
| AAGGGAGGCAACGTGGAACA+TGG | + | chr8_2:69792952-69792971 | Msa1265440:CDS | 55.0% | |
| !! | GAGTACCCTGCTTTAGAGGG+GGG | - | chr8_2:69793891-69793910 | None:intergenic | 55.0% |
| GCTGCACCCACCAAAAGACA+TGG | - | chr8_2:69794675-69794694 | None:intergenic | 55.0% | |
| GCGCATGCAAATGGGAGGTT+AGG | + | chr8_2:69795315-69795334 | Msa1265440:intron | 55.0% | |
| TCCTCTGCTAGCAGCAGAAG+GGG | + | chr8_2:69795694-69795713 | Msa1265440:intron | 55.0% | |
| TGACATGGTCCGTGTCTCTG+TGG | + | chr8_2:69795732-69795751 | Msa1265440:intron | 55.0% | |
| !! | CTCTGTGGTGTTGATAGGGG+TGG | + | chr8_2:69795747-69795766 | Msa1265440:intron | 55.0% |
| CACACCATTTCCGCCATGAC+CGG | + | chr8_2:69795820-69795839 | Msa1265440:intron | 55.0% | |
| ! | AATGCCGGTCATGGCGGAAA+TGG | - | chr8_2:69795827-69795846 | None:intergenic | 55.0% |
| CTAAGGGGGGCAGTGAAGAA+TGG | - | chr8_2:69796182-69796201 | None:intergenic | 55.0% | |
| CAGAAGGAAGGGAGGCAACG+TGG | + | chr8_2:69792945-69792964 | Msa1265440:intron | 60.0% | |
| !! | TACCCACCCCCCTCTAAAGC+AGG | + | chr8_2:69793882-69793901 | Msa1265440:intron | 60.0% |
| !! | ACCCACCCCCCTCTAAAGCA+GGG | + | chr8_2:69793883-69793902 | Msa1265440:intron | 60.0% |
| !! | ACCCTGCTTTAGAGGGGGGT+GGG | - | chr8_2:69793887-69793906 | None:intergenic | 60.0% |
| !! | TACCCTGCTTTAGAGGGGGG+TGG | - | chr8_2:69793888-69793907 | None:intergenic | 60.0% |
| ACCCCTTCTGCTGCTAGCAG+AGG | - | chr8_2:69795698-69795717 | None:intergenic | 60.0% | |
| !! | GGTGTTGATAGGGGTGGTGC+TGG | + | chr8_2:69795753-69795772 | Msa1265440:intron | 60.0% |
| ! | CGGTCATGGCGGAAATGGTG+TGG | - | chr8_2:69795822-69795841 | None:intergenic | 60.0% |
| CAGGGAATCGGCACCAGCTG+AGG | + | chr8_2:69794992-69795011 | Msa1265440:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 69791290 | 69796375 | 69791290 | ID=Msa1265440;Name=Msa1265440 |
| chr8_2 | mRNA | 69791290 | 69796375 | 69791290 | ID=Msa1265440-mRNA-1;Parent=Msa1265440;Name=Msa1265440-mRNA-1;_AED=0.27;_eAED=0.27;_QI=147|1|1|1|1|1|16|304|375 |
| chr8_2 | exon | 69791290 | 69791469 | 69791290 | ID=Msa1265440-mRNA-1:exon:23120;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69791547 | 69791575 | 69791547 | ID=Msa1265440-mRNA-1:exon:23121;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69791664 | 69791775 | 69791664 | ID=Msa1265440-mRNA-1:exon:23122;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69791869 | 69791966 | 69791869 | ID=Msa1265440-mRNA-1:exon:23123;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69792057 | 69792153 | 69792057 | ID=Msa1265440-mRNA-1:exon:23124;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69792366 | 69792455 | 69792366 | ID=Msa1265440-mRNA-1:exon:23125;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69792568 | 69792630 | 69792568 | ID=Msa1265440-mRNA-1:exon:23126;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69792781 | 69792855 | 69792781 | ID=Msa1265440-mRNA-1:exon:23127;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69792948 | 69793013 | 69792948 | ID=Msa1265440-mRNA-1:exon:23128;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69793101 | 69793178 | 69793101 | ID=Msa1265440-mRNA-1:exon:23129;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69793949 | 69794059 | 69793949 | ID=Msa1265440-mRNA-1:exon:23130;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69794139 | 69794216 | 69794139 | ID=Msa1265440-mRNA-1:exon:23131;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69794319 | 69794438 | 69794319 | ID=Msa1265440-mRNA-1:exon:23132;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69794869 | 69794912 | 69794869 | ID=Msa1265440-mRNA-1:exon:23133;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69794995 | 69795013 | 69794995 | ID=Msa1265440-mRNA-1:exon:23134;Parent=Msa1265440-mRNA-1 |
| chr8_2 | exon | 69796057 | 69796375 | 69796057 | ID=Msa1265440-mRNA-1:exon:23135;Parent=Msa1265440-mRNA-1 |
| chr8_2 | five_prime_UTR | 69791290 | 69791436 | 69791290 | ID=Msa1265440-mRNA-1:five_prime_utr;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69791437 | 69791469 | 69791437 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69791547 | 69791575 | 69791547 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69791664 | 69791775 | 69791664 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69791869 | 69791966 | 69791869 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69792057 | 69792153 | 69792057 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69792366 | 69792455 | 69792366 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69792568 | 69792630 | 69792568 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69792781 | 69792855 | 69792781 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69792948 | 69793013 | 69792948 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69793101 | 69793178 | 69793101 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69793949 | 69794059 | 69793949 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69794139 | 69794216 | 69794139 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69794319 | 69794438 | 69794319 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69794869 | 69794912 | 69794869 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69794995 | 69795013 | 69794995 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | CDS | 69796057 | 69796071 | 69796057 | ID=Msa1265440-mRNA-1:cds;Parent=Msa1265440-mRNA-1 |
| chr8_2 | three_prime_UTR | 69796072 | 69796375 | 69796072 | ID=Msa1265440-mRNA-1:three_prime_utr;Parent=Msa1265440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
