Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277450 | XP_003594276.1 | 99.005 | 201 | 2 | 0 | 1 | 201 | 1 | 201 | 1.09e-140 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277450 | sp|A7R385|CSPLC_VITVI | 78.462 | 195 | 42 | 0 | 1 | 195 | 1 | 195 | 2.07e-105 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277450 | G7IPB7 | 99.005 | 201 | 2 | 0 | 1 | 201 | 1 | 201 | 5.22e-141 | 400 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0277450 | 0.813869 | 2.057637e-51 | -8.615850e-47 |
| Msa0003720 | Msa0277450 | 0.833992 | 3.876535e-56 | -8.615850e-47 |
| Msa0004540 | Msa0277450 | 0.813161 | 2.944083e-51 | -8.615850e-47 |
| Msa0007970 | Msa0277450 | 0.820776 | 5.736172e-53 | -8.615850e-47 |
| Msa0012940 | Msa0277450 | 0.809591 | 1.754213e-50 | -8.615850e-47 |
| Msa0014570 | Msa0277450 | 0.834705 | 2.568076e-56 | -8.615850e-47 |
| Msa0022010 | Msa0277450 | 0.813978 | 1.946189e-51 | -8.615850e-47 |
| Msa0024710 | Msa0277450 | 0.802482 | 5.494373e-49 | -8.615850e-47 |
| Msa0027820 | Msa0277450 | 0.812972 | 3.239514e-51 | -8.615850e-47 |
| Msa0032320 | Msa0277450 | 0.800038 | 1.738033e-48 | -8.615850e-47 |
| Msa0032920 | Msa0277450 | -0.840421 | 8.782657e-58 | -8.615850e-47 |
| Msa0032960 | Msa0277450 | -0.810511 | 1.111772e-50 | -8.615850e-47 |
| Msa0033110 | Msa0277450 | 0.814007 | 1.917878e-51 | -8.615850e-47 |
| Msa0033260 | Msa0277450 | 0.808138 | 3.589240e-50 | -8.615850e-47 |
| Msa0033880 | Msa0277450 | 0.808770 | 2.630734e-50 | -8.615850e-47 |
| Msa0036130 | Msa0277450 | 0.811119 | 8.211856e-51 | -8.615850e-47 |
| Msa0039900 | Msa0277450 | -0.823613 | 1.260511e-53 | -8.615850e-47 |
| Msa0040690 | Msa0277450 | 0.816756 | 4.693908e-52 | -8.615850e-47 |
| Msa0048180 | Msa0277450 | 0.831428 | 1.679159e-55 | -8.615850e-47 |
| Msa0051020 | Msa0277450 | 0.801670 | 8.069498e-49 | -8.615850e-47 |
| Msa0052610 | Msa0277450 | 0.822254 | 2.613825e-53 | -8.615850e-47 |
| Msa0057710 | Msa0277450 | 0.806351 | 8.579943e-50 | -8.615850e-47 |
| Msa0063890 | Msa0277450 | 0.807643 | 4.573849e-50 | -8.615850e-47 |
| Msa0065680 | Msa0277450 | -0.800241 | 1.580579e-48 | -8.615850e-47 |
| Msa0067870 | Msa0277450 | 0.804779 | 1.833332e-49 | -8.615850e-47 |
| Msa0075170 | Msa0277450 | 0.822820 | 1.930745e-53 | -8.615850e-47 |
| Msa0081520 | Msa0277450 | 0.843865 | 1.077340e-58 | -8.615850e-47 |
| Msa0081650 | Msa0277450 | 0.811213 | 7.832232e-51 | -8.615850e-47 |
| Msa0081710 | Msa0277450 | 0.807059 | 6.080167e-50 | -8.615850e-47 |
| Msa0084380 | Msa0277450 | 0.804361 | 2.241234e-49 | -8.615850e-47 |
| Msa0090520 | Msa0277450 | 0.836776 | 7.676261e-57 | -8.615850e-47 |
| Msa0091410 | Msa0277450 | 0.804996 | 1.651850e-49 | -8.615850e-47 |
| Msa0091610 | Msa0277450 | 0.800591 | 1.341193e-48 | -8.615850e-47 |
| Msa0093850 | Msa0277450 | 0.863409 | 2.541725e-64 | -8.615850e-47 |
| Msa0094580 | Msa0277450 | 0.833737 | 4.489567e-56 | -8.615850e-47 |
| Msa0094850 | Msa0277450 | 0.802231 | 6.187667e-49 | -8.615850e-47 |
| Msa0097850 | Msa0277450 | 0.825647 | 4.181608e-54 | -8.615850e-47 |
| Msa0101270 | Msa0277450 | 0.811059 | 8.459221e-51 | -8.615850e-47 |
| Msa0101440 | Msa0277450 | 0.807879 | 4.073403e-50 | -8.615850e-47 |
| Msa0103240 | Msa0277450 | 0.815399 | 9.430428e-52 | -8.615850e-47 |
| Msa0106710 | Msa0277450 | 0.808544 | 2.939311e-50 | -8.615850e-47 |
| Msa0108390 | Msa0277450 | 0.801002 | 1.105783e-48 | -8.615850e-47 |
| Msa0123510 | Msa0277450 | 0.811579 | 6.524836e-51 | -8.615850e-47 |
| Msa0127850 | Msa0277450 | 0.820639 | 6.167383e-53 | -8.615850e-47 |
| Msa0128860 | Msa0277450 | 0.809221 | 2.106168e-50 | -8.615850e-47 |
| Msa0130240 | Msa0277450 | 0.843962 | 1.014688e-58 | -8.615850e-47 |
| Msa0131330 | Msa0277450 | 0.836809 | 7.528293e-57 | -8.615850e-47 |
| Msa0136070 | Msa0277450 | 0.807870 | 4.092240e-50 | -8.615850e-47 |
| Msa0136100 | Msa0277450 | 0.809175 | 2.154740e-50 | -8.615850e-47 |
| Msa0137990 | Msa0277450 | 0.836403 | 9.552734e-57 | -8.615850e-47 |
| Msa0138360 | Msa0277450 | 0.828426 | 9.050558e-55 | -8.615850e-47 |
| Msa0140500 | Msa0277450 | -0.817906 | 2.586435e-52 | -8.615850e-47 |
| Msa0145580 | Msa0277450 | 0.806870 | 6.668313e-50 | -8.615850e-47 |
| Msa0146280 | Msa0277450 | 0.813622 | 2.332178e-51 | -8.615850e-47 |
| Msa0147980 | Msa0277450 | 0.824681 | 7.074729e-54 | -8.615850e-47 |
| Msa0154440 | Msa0277450 | 0.827680 | 1.368417e-54 | -8.615850e-47 |
| Msa0166460 | Msa0277450 | 0.810497 | 1.119459e-50 | -8.615850e-47 |
| Msa0168500 | Msa0277450 | 0.812097 | 5.032773e-51 | -8.615850e-47 |
| Msa0173890 | Msa0277450 | 0.856998 | 2.201783e-62 | -8.615850e-47 |
| Msa0174320 | Msa0277450 | 0.803966 | 2.708165e-49 | -8.615850e-47 |
| Msa0174730 | Msa0277450 | 0.809810 | 1.573874e-50 | -8.615850e-47 |
| Msa0183900 | Msa0277450 | 0.825904 | 3.634490e-54 | -8.615850e-47 |
| Msa0187930 | Msa0277450 | 0.801654 | 8.129332e-49 | -8.615850e-47 |
| Msa0188350 | Msa0277450 | 0.836275 | 1.029632e-56 | -8.615850e-47 |
| Msa0188890 | Msa0277450 | 0.830388 | 3.019892e-55 | -8.615850e-47 |
| Msa0189300 | Msa0277450 | 0.806739 | 7.107686e-50 | -8.615850e-47 |
| Msa0192480 | Msa0277450 | 0.811028 | 8.590622e-51 | -8.615850e-47 |
| Msa0194540 | Msa0277450 | 0.802079 | 6.651215e-49 | -8.615850e-47 |
| Msa0204960 | Msa0277450 | 0.805397 | 1.361796e-49 | -8.615850e-47 |
| Msa0206690 | Msa0277450 | 0.821355 | 4.220380e-53 | -8.615850e-47 |
| Msa0207350 | Msa0277450 | 0.803337 | 3.657904e-49 | -8.615850e-47 |
| Msa0211150 | Msa0277450 | 0.821728 | 3.461143e-53 | -8.615850e-47 |
| Msa0214550 | Msa0277450 | 0.826263 | 2.985255e-54 | -8.615850e-47 |
| Msa0221000 | Msa0277450 | 0.852274 | 5.139045e-61 | -8.615850e-47 |
| Msa0222620 | Msa0277450 | 0.819412 | 1.177218e-52 | -8.615850e-47 |
| Msa0223080 | Msa0277450 | 0.815034 | 1.136820e-51 | -8.615850e-47 |
| Msa0223230 | Msa0277450 | 0.812012 | 5.251217e-51 | -8.615850e-47 |
| Msa0225100 | Msa0277450 | 0.801316 | 9.538034e-49 | -8.615850e-47 |
| Msa0226460 | Msa0277450 | 0.807530 | 4.832065e-50 | -8.615850e-47 |
| Msa0229170 | Msa0277450 | 0.814424 | 1.551408e-51 | -8.615850e-47 |
| Msa0230150 | Msa0277450 | 0.808936 | 2.424262e-50 | -8.615850e-47 |
| Msa0231100 | Msa0277450 | 0.808566 | 2.908530e-50 | -8.615850e-47 |
| Msa0231380 | Msa0277450 | 0.840038 | 1.105841e-57 | -8.615850e-47 |
| Msa0233730 | Msa0277450 | 0.821159 | 4.682261e-53 | -8.615850e-47 |
| Msa0240900 | Msa0277450 | 0.818222 | 2.193931e-52 | -8.615850e-47 |
| Msa0241830 | Msa0277450 | 0.803270 | 3.776022e-49 | -8.615850e-47 |
| Msa0249580 | Msa0277450 | 0.825377 | 4.845095e-54 | -8.615850e-47 |
| Msa0254790 | Msa0277450 | 0.804820 | 1.797956e-49 | -8.615850e-47 |
| Msa0257520 | Msa0277450 | 0.803447 | 3.471347e-49 | -8.615850e-47 |
| Msa0261170 | Msa0277450 | 0.801342 | 9.421042e-49 | -8.615850e-47 |
| Msa0263080 | Msa0277450 | 0.806225 | 9.120888e-50 | -8.615850e-47 |
| Msa0266350 | Msa0277450 | 0.816156 | 6.393794e-52 | -8.615850e-47 |
| Msa0266500 | Msa0277450 | 0.806481 | 8.056858e-50 | -8.615850e-47 |
| Msa0267920 | Msa0277450 | 0.811553 | 6.608176e-51 | -8.615850e-47 |
| Msa0270660 | Msa0277450 | 0.836967 | 6.858541e-57 | -8.615850e-47 |
| Msa0277450 | Msa0279850 | 0.801737 | 7.816642e-49 | -8.615850e-47 |
| Msa0277450 | Msa0281430 | 0.801638 | 8.192874e-49 | -8.615850e-47 |
| Msa0277450 | Msa0281530 | 0.809410 | 1.918783e-50 | -8.615850e-47 |
| Msa0277450 | Msa0292120 | 0.818078 | 2.364311e-52 | -8.615850e-47 |
| Msa0277450 | Msa0292400 | 0.806755 | 7.052312e-50 | -8.615850e-47 |
| Msa0277450 | Msa0296250 | 0.815364 | 9.602304e-52 | -8.615850e-47 |
| Msa0277450 | Msa0297790 | 0.817667 | 2.927562e-52 | -8.615850e-47 |
| Msa0277450 | Msa0300270 | 0.856276 | 3.590402e-62 | -8.615850e-47 |
| Msa0277450 | Msa0300320 | 0.871731 | 5.466694e-67 | -8.615850e-47 |
| Msa0277450 | Msa0300690 | 0.828327 | 9.564522e-55 | -8.615850e-47 |
| Msa0277450 | Msa0302160 | 0.818406 | 1.993341e-52 | -8.615850e-47 |
| Msa0277450 | Msa0305780 | 0.807965 | 3.906049e-50 | -8.615850e-47 |
| Msa0277450 | Msa0317160 | 0.942839 | 3.521560e-102 | -8.615850e-47 |
| Msa0277450 | Msa0317970 | 0.834008 | 3.840696e-56 | -8.615850e-47 |
| Msa0277450 | Msa0320590 | 0.818664 | 1.741940e-52 | -8.615850e-47 |
| Msa0277450 | Msa0322900 | 0.827447 | 1.556498e-54 | -8.615850e-47 |
| Msa0277450 | Msa0326480 | 0.827530 | 1.486636e-54 | -8.615850e-47 |
| Msa0277450 | Msa0326590 | 0.833867 | 4.165881e-56 | -8.615850e-47 |
| Msa0277450 | Msa0335800 | 0.833518 | 5.092335e-56 | -8.615850e-47 |
| Msa0277450 | Msa0337700 | 0.849963 | 2.306568e-60 | -8.615850e-47 |
| Msa0277450 | Msa0339250 | 0.814187 | 1.750132e-51 | -8.615850e-47 |
| Msa0277450 | Msa0339490 | 0.823419 | 1.399323e-53 | -8.615850e-47 |
| Msa0277450 | Msa0339500 | 0.828754 | 7.542309e-55 | -8.615850e-47 |
| Msa0277450 | Msa0341690 | 0.876138 | 1.771318e-68 | -8.615850e-47 |
| Msa0277450 | Msa0345330 | 0.822446 | 2.359118e-53 | -8.615850e-47 |
| Msa0277450 | Msa0345410 | 0.811398 | 7.141600e-51 | -8.615850e-47 |
| Msa0277450 | Msa0357900 | 0.833513 | 5.106743e-56 | -8.615850e-47 |
| Msa0277450 | Msa0358890 | 0.809953 | 1.466063e-50 | -8.615850e-47 |
| Msa0277450 | Msa0365100 | 0.851839 | 6.834325e-61 | -8.615850e-47 |
| Msa0277450 | Msa0376630 | 0.814631 | 1.396180e-51 | -8.615850e-47 |
| Msa0277450 | Msa0378720 | 0.854942 | 8.792899e-62 | -8.615850e-47 |
| Msa0277450 | Msa0378970 | 0.802424 | 5.647525e-49 | -8.615850e-47 |
| Msa0277450 | Msa0381610 | -0.808634 | 2.812854e-50 | -8.615850e-47 |
| Msa0277450 | Msa0419720 | 0.806142 | 9.494291e-50 | -8.615850e-47 |
| Msa0277450 | Msa0423750 | 0.822350 | 2.483454e-53 | -8.615850e-47 |
| Msa0277450 | Msa0427100 | 0.835864 | 1.309066e-56 | -8.615850e-47 |
| Msa0277450 | Msa0427120 | 0.843226 | 1.596289e-58 | -8.615850e-47 |
| Msa0277450 | Msa0428050 | 0.811495 | 6.805408e-51 | -8.615850e-47 |
| Msa0277450 | Msa0428240 | 0.834070 | 3.706861e-56 | -8.615850e-47 |
| Msa0277450 | Msa0450400 | -0.805054 | 1.606395e-49 | -8.615850e-47 |
| Msa0277450 | Msa0452710 | 0.810002 | 1.431410e-50 | -8.615850e-47 |
| Msa0277450 | Msa0453690 | 0.809109 | 2.226226e-50 | -8.615850e-47 |
| Msa0277450 | Msa0456880 | 0.805122 | 1.554609e-49 | -8.615850e-47 |
| Msa0277450 | Msa0473500 | 0.864708 | 1.001075e-64 | -8.615850e-47 |
| Msa0277450 | Msa0474730 | 0.828670 | 7.902617e-55 | -8.615850e-47 |
| Msa0277450 | Msa0479170 | 0.852356 | 4.871895e-61 | -8.615850e-47 |
| Msa0277450 | Msa0479200 | 0.849679 | 2.769515e-60 | -8.615850e-47 |
| Msa0277450 | Msa0498060 | 0.805464 | 1.318023e-49 | -8.615850e-47 |
| Msa0277450 | Msa0498450 | 0.800485 | 1.410050e-48 | -8.615850e-47 |
| Msa0277450 | Msa0517090 | 0.825251 | 5.189797e-54 | -8.615850e-47 |
| Msa0277450 | Msa0518030 | 0.831955 | 1.244417e-55 | -8.615850e-47 |
| Msa0277450 | Msa0519130 | 0.807724 | 4.395114e-50 | -8.615850e-47 |
| Msa0277450 | Msa0526540 | 0.830162 | 3.430645e-55 | -8.615850e-47 |
| Msa0277450 | Msa0527020 | 0.811008 | 8.677424e-51 | -8.615850e-47 |
| Msa0277450 | Msa0527150 | 0.807089 | 5.993362e-50 | -8.615850e-47 |
| Msa0277450 | Msa0527190 | 0.823787 | 1.147736e-53 | -8.615850e-47 |
| Msa0277450 | Msa0531250 | 0.807062 | 6.072794e-50 | -8.615850e-47 |
| Msa0277450 | Msa0532980 | 0.825208 | 5.314215e-54 | -8.615850e-47 |
| Msa0277450 | Msa0532990 | 0.811361 | 7.276231e-51 | -8.615850e-47 |
| Msa0277450 | Msa0547720 | 0.803889 | 2.810810e-49 | -8.615850e-47 |
| Msa0277450 | Msa0547990 | 0.805130 | 1.548957e-49 | -8.615850e-47 |
| Msa0277450 | Msa0556010 | 0.838095 | 3.525443e-57 | -8.615850e-47 |
| Msa0277450 | Msa0559870 | 0.800286 | 1.547568e-48 | -8.615850e-47 |
| Msa0277450 | Msa0572840 | 0.810840 | 9.434442e-51 | -8.615850e-47 |
| Msa0277450 | Msa0574390 | 0.834175 | 3.489465e-56 | -8.615850e-47 |
| Msa0277450 | Msa0576680 | 0.809073 | 2.265287e-50 | -8.615850e-47 |
| Msa0277450 | Msa0576940 | 0.812449 | 4.215798e-51 | -8.615850e-47 |
| Msa0277450 | Msa0581690 | 0.810983 | 8.787146e-51 | -8.615850e-47 |
| Msa0277450 | Msa0584550 | 0.803833 | 2.886767e-49 | -8.615850e-47 |
| Msa0277450 | Msa0588090 | 0.813943 | 1.981469e-51 | -8.615850e-47 |
| Msa0277450 | Msa0607520 | 0.821142 | 4.725730e-53 | -8.615850e-47 |
| Msa0277450 | Msa0614000 | 0.832409 | 9.611504e-56 | -8.615850e-47 |
| Msa0277450 | Msa0614930 | 0.808359 | 3.219253e-50 | -8.615850e-47 |
| Msa0277450 | Msa0615420 | 0.817925 | 2.561143e-52 | -8.615850e-47 |
| Msa0277450 | Msa0615440 | 0.819248 | 1.282827e-52 | -8.615850e-47 |
| Msa0277450 | Msa0618950 | 0.806034 | 1.000629e-49 | -8.615850e-47 |
| Msa0277450 | Msa0618970 | 0.800945 | 1.135670e-48 | -8.615850e-47 |
| Msa0277450 | Msa0620620 | 0.803963 | 2.712156e-49 | -8.615850e-47 |
| Msa0277450 | Msa0620990 | 0.800164 | 1.638504e-48 | -8.615850e-47 |
| Msa0277450 | Msa0623330 | 0.823745 | 1.174227e-53 | -8.615850e-47 |
| Msa0277450 | Msa0626450 | 0.823246 | 1.535445e-53 | -8.615850e-47 |
| Msa0277450 | Msa0626490 | 0.826952 | 2.044958e-54 | -8.615850e-47 |
| Msa0277450 | Msa0626510 | 0.817867 | 2.639061e-52 | -8.615850e-47 |
| Msa0277450 | Msa0628420 | 0.817888 | 2.610264e-52 | -8.615850e-47 |
| Msa0277450 | Msa0638480 | 0.875581 | 2.752484e-68 | -8.615850e-47 |
| Msa0277450 | Msa0658960 | 0.822526 | 2.260219e-53 | -8.615850e-47 |
| Msa0277450 | Msa0662340 | 0.801736 | 7.822220e-49 | -8.615850e-47 |
| Msa0277450 | Msa0664600 | 0.823461 | 1.368360e-53 | -8.615850e-47 |
| Msa0277450 | Msa0664910 | 0.832346 | 9.959808e-56 | -8.615850e-47 |
| Msa0277450 | Msa0666230 | 0.814632 | 1.395599e-51 | -8.615850e-47 |
| Msa0277450 | Msa0667770 | 0.801468 | 8.877641e-49 | -8.615850e-47 |
| Msa0277450 | Msa0667790 | 0.817234 | 3.664606e-52 | -8.615850e-47 |
| Msa0277450 | Msa0669520 | 0.822753 | 2.001471e-53 | -8.615850e-47 |
| Msa0277450 | Msa0679700 | 0.802807 | 4.709321e-49 | -8.615850e-47 |
| Msa0277450 | Msa0697160 | 0.829973 | 3.813465e-55 | -8.615850e-47 |
| Msa0277450 | Msa0698490 | 0.817879 | 2.622259e-52 | -8.615850e-47 |
| Msa0277450 | Msa0698640 | 0.808313 | 3.293767e-50 | -8.615850e-47 |
| Msa0277450 | Msa0698660 | 0.813560 | 2.406108e-51 | -8.615850e-47 |
| Msa0277450 | Msa0698800 | 0.808039 | 3.767478e-50 | -8.615850e-47 |
| Msa0277450 | Msa0703680 | 0.812323 | 4.490934e-51 | -8.615850e-47 |
| Msa0277450 | Msa0704660 | 0.813633 | 2.318682e-51 | -8.615850e-47 |
| Msa0277450 | Msa0707250 | 0.801357 | 9.353025e-49 | -8.615850e-47 |
| Msa0277450 | Msa0710800 | 0.820428 | 6.896525e-53 | -8.615850e-47 |
| Msa0277450 | Msa0716410 | 0.812301 | 4.542998e-51 | -8.615850e-47 |
| Msa0277450 | Msa0720820 | 0.801457 | 8.924790e-49 | -8.615850e-47 |
| Msa0277450 | Msa0755150 | 0.804427 | 2.171809e-49 | -8.615850e-47 |
| Msa0277450 | Msa0755330 | 0.810312 | 1.226834e-50 | -8.615850e-47 |
| Msa0277450 | Msa0766930 | 0.815278 | 1.003246e-51 | -8.615850e-47 |
| Msa0277450 | Msa0784380 | 0.813319 | 2.718996e-51 | -8.615850e-47 |
| Msa0277450 | Msa0788770 | 0.802593 | 5.213023e-49 | -8.615850e-47 |
| Msa0277450 | Msa0790610 | 0.834278 | 3.287467e-56 | -8.615850e-47 |
| Msa0277450 | Msa0799000 | 0.802639 | 5.098617e-49 | -8.615850e-47 |
| Msa0277450 | Msa0800270 | 0.804316 | 2.290897e-49 | -8.615850e-47 |
| Msa0277450 | Msa0807280 | 0.817764 | 2.784908e-52 | -8.615850e-47 |
| Msa0277450 | Msa0807820 | 0.829210 | 5.846865e-55 | -8.615850e-47 |
| Msa0277450 | Msa0808800 | 0.826018 | 3.415549e-54 | -8.615850e-47 |
| Msa0277450 | Msa0822310 | -0.822248 | 2.622636e-53 | -8.615850e-47 |
| Msa0277450 | Msa0828560 | 0.822872 | 1.877893e-53 | -8.615850e-47 |
| Msa0277450 | Msa0832120 | 0.807019 | 6.200570e-50 | -8.615850e-47 |
| Msa0277450 | Msa0833190 | -0.814404 | 1.567480e-51 | -8.615850e-47 |
| Msa0277450 | Msa0841940 | 0.802053 | 6.731493e-49 | -8.615850e-47 |
| Msa0277450 | Msa0861510 | 0.837146 | 6.173391e-57 | -8.615850e-47 |
| Msa0277450 | Msa0861530 | 0.821372 | 4.182143e-53 | -8.615850e-47 |
| Msa0277450 | Msa0861600 | 0.827369 | 1.625077e-54 | -8.615850e-47 |
| Msa0277450 | Msa0863930 | 0.810959 | 8.891920e-51 | -8.615850e-47 |
| Msa0277450 | Msa0865570 | 0.807669 | 4.515064e-50 | -8.615850e-47 |
| Msa0277450 | Msa0866520 | 0.821205 | 4.570023e-53 | -8.615850e-47 |
| Msa0277450 | Msa0878510 | 0.800828 | 1.199987e-48 | -8.615850e-47 |
| Msa0277450 | Msa0902760 | 0.816811 | 4.562806e-52 | -8.615850e-47 |
| Msa0277450 | Msa0922410 | 0.801330 | 9.475970e-49 | -8.615850e-47 |
| Msa0277450 | Msa0940580 | 0.812907 | 3.346608e-51 | -8.615850e-47 |
| Msa0277450 | Msa0944660 | 0.808985 | 2.365928e-50 | -8.615850e-47 |
| Msa0277450 | Msa0980540 | 0.812862 | 3.423673e-51 | -8.615850e-47 |
| Msa0277450 | Msa0997430 | 0.809476 | 1.856510e-50 | -8.615850e-47 |
| Msa0277450 | Msa1002850 | 0.830548 | 2.759956e-55 | -8.615850e-47 |
| Msa0277450 | Msa1006840 | 0.828532 | 8.533545e-55 | -8.615850e-47 |
| Msa0277450 | Msa1009660 | 0.821555 | 3.794108e-53 | -8.615850e-47 |
| Msa0277450 | Msa1013400 | 0.813830 | 2.098093e-51 | -8.615850e-47 |
| Msa0277450 | Msa1014510 | 0.800829 | 1.199277e-48 | -8.615850e-47 |
| Msa0277450 | Msa1020510 | 0.817224 | 3.683977e-52 | -8.615850e-47 |
| Msa0277450 | Msa1020630 | 0.804491 | 2.106239e-49 | -8.615850e-47 |
| Msa0277450 | Msa1029070 | 0.809247 | 2.079109e-50 | -8.615850e-47 |
| Msa0277450 | Msa1031930 | 0.836576 | 8.632168e-57 | -8.615850e-47 |
| Msa0277450 | Msa1036610 | 0.807713 | 4.418563e-50 | -8.615850e-47 |
| Msa0277450 | Msa1040840 | 0.836998 | 6.737679e-57 | -8.615850e-47 |
| Msa0277450 | Msa1047870 | 0.802623 | 5.138149e-49 | -8.615850e-47 |
| Msa0277450 | Msa1050910 | 0.817873 | 2.630860e-52 | -8.615850e-47 |
| Msa0277450 | Msa1050960 | 0.809089 | 2.248464e-50 | -8.615850e-47 |
| Msa0277450 | Msa1051880 | 0.809584 | 1.760783e-50 | -8.615850e-47 |
| Msa0277450 | Msa1055010 | 0.825600 | 4.291956e-54 | -8.615850e-47 |
| Msa0277450 | Msa1065390 | 0.803215 | 3.877103e-49 | -8.615850e-47 |
| Msa0277450 | Msa1066490 | 0.828693 | 7.803080e-55 | -8.615850e-47 |
| Msa0277450 | Msa1071770 | 0.828785 | 7.410730e-55 | -8.615850e-47 |
| Msa0277450 | Msa1078170 | 0.832665 | 8.302771e-56 | -8.615850e-47 |
| Msa0277450 | Msa1079230 | 0.840226 | 9.876010e-58 | -8.615850e-47 |
| Msa0277450 | Msa1080640 | 0.808164 | 3.542976e-50 | -8.615850e-47 |
| Msa0277450 | Msa1080800 | 0.807348 | 5.282289e-50 | -8.615850e-47 |
| Msa0277450 | Msa1089320 | 0.801564 | 8.485474e-49 | -8.615850e-47 |
| Msa0277450 | Msa1089450 | 0.829524 | 4.904891e-55 | -8.615850e-47 |
| Msa0277450 | Msa1093260 | 0.803371 | 3.598864e-49 | -8.615850e-47 |
| Msa0277450 | Msa1093530 | 0.817802 | 2.729937e-52 | -8.615850e-47 |
| Msa0277450 | Msa1093840 | 0.821021 | 5.038755e-53 | -8.615850e-47 |
| Msa0277450 | Msa1101090 | 0.805009 | 1.641862e-49 | -8.615850e-47 |
| Msa0277450 | Msa1104140 | 0.811952 | 5.412951e-51 | -8.615850e-47 |
| Msa0277450 | Msa1113800 | 0.826458 | 2.682861e-54 | -8.615850e-47 |
| Msa0277450 | Msa1123380 | 0.855820 | 4.882274e-62 | -8.615850e-47 |
| Msa0277450 | Msa1124110 | 0.816676 | 4.892368e-52 | -8.615850e-47 |
| Msa0277450 | Msa1126450 | 0.837007 | 6.701392e-57 | -8.615850e-47 |
| Msa0277450 | Msa1127590 | 0.823691 | 1.208550e-53 | -8.615850e-47 |
| Msa0277450 | Msa1135270 | 0.808845 | 2.534668e-50 | -8.615850e-47 |
| Msa0277450 | Msa1135890 | 0.816385 | 5.681927e-52 | -8.615850e-47 |
| Msa0277450 | Msa1137570 | 0.808345 | 3.242463e-50 | -8.615850e-47 |
| Msa0277450 | Msa1139890 | 0.805136 | 1.544264e-49 | -8.615850e-47 |
| Msa0277450 | Msa1145240 | 0.808984 | 2.367397e-50 | -8.615850e-47 |
| Msa0277450 | Msa1156160 | 0.803680 | 3.105836e-49 | -8.615850e-47 |
| Msa0277450 | Msa1158830 | 0.822759 | 1.994907e-53 | -8.615850e-47 |
| Msa0277450 | Msa1160500 | 0.820487 | 6.682557e-53 | -8.615850e-47 |
| Msa0277450 | Msa1162780 | 0.804235 | 2.380755e-49 | -8.615850e-47 |
| Msa0277450 | Msa1163650 | -0.839280 | 1.741561e-57 | -8.615850e-47 |
| Msa0277450 | Msa1163730 | 0.811392 | 7.164712e-51 | -8.615850e-47 |
| Msa0277450 | Msa1168160 | 0.808685 | 2.743018e-50 | -8.615850e-47 |
| Msa0277450 | Msa1168950 | 0.821268 | 4.419868e-53 | -8.615850e-47 |
| Msa0277450 | Msa1169040 | 0.816760 | 4.683696e-52 | -8.615850e-47 |
| Msa0277450 | Msa1173300 | 0.807354 | 5.266354e-50 | -8.615850e-47 |
| Msa0277450 | Msa1174530 | 0.834214 | 3.411697e-56 | -8.615850e-47 |
| Msa0277450 | Msa1181190 | 0.805843 | 1.097382e-49 | -8.615850e-47 |
| Msa0277450 | Msa1193290 | 0.804232 | 2.384940e-49 | -8.615850e-47 |
| Msa0277450 | Msa1203710 | 0.801963 | 7.026161e-49 | -8.615850e-47 |
| Msa0277450 | Msa1204100 | -0.810584 | 1.072093e-50 | -8.615850e-47 |
| Msa0277450 | Msa1205280 | 0.801544 | 8.562712e-49 | -8.615850e-47 |
| Msa0277450 | Msa1207270 | 0.801373 | 9.282170e-49 | -8.615850e-47 |
| Msa0277450 | Msa1208160 | 0.833727 | 4.517818e-56 | -8.615850e-47 |
| Msa0277450 | Msa1208430 | 0.817945 | 2.534085e-52 | -8.615850e-47 |
| Msa0277450 | Msa1208890 | -0.803747 | 3.008302e-49 | -8.615850e-47 |
| Msa0277450 | Msa1218450 | 0.817247 | 3.640992e-52 | -8.615850e-47 |
| Msa0277450 | Msa1218600 | 0.807374 | 5.214516e-50 | -8.615850e-47 |
| Msa0277450 | Msa1219000 | 0.829391 | 5.285336e-55 | -8.615850e-47 |
| Msa0277450 | Msa1221060 | 0.821083 | 4.876127e-53 | -8.615850e-47 |
| Msa0277450 | Msa1226470 | 0.806338 | 8.633103e-50 | -8.615850e-47 |
| Msa0277450 | Msa1227460 | 0.819359 | 1.210363e-52 | -8.615850e-47 |
| Msa0277450 | Msa1235250 | 0.836383 | 9.665011e-57 | -8.615850e-47 |
| Msa0277450 | Msa1238930 | 0.802102 | 6.580144e-49 | -8.615850e-47 |
| Msa0277450 | Msa1251160 | 0.813048 | 3.117942e-51 | -8.615850e-47 |
| Msa0277450 | Msa1254730 | 0.809922 | 1.489118e-50 | -8.615850e-47 |
| Msa0277450 | Msa1256470 | 0.803320 | 3.688607e-49 | -8.615850e-47 |
| Msa0277450 | Msa1256850 | 0.809152 | 2.179594e-50 | -8.615850e-47 |
| Msa0277450 | Msa1259070 | -0.804030 | 2.626848e-49 | -8.615850e-47 |
| Msa0277450 | Msa1262890 | 0.826771 | 2.259556e-54 | -8.615850e-47 |
| Msa0277450 | Msa1265440 | 0.812216 | 4.740712e-51 | -8.615850e-47 |
| Msa0277450 | Msa1270420 | 0.823236 | 1.543786e-53 | -8.615850e-47 |
| Msa0277450 | Msa1275590 | 0.817797 | 2.737268e-52 | -8.615850e-47 |
| Msa0277450 | Msa1276660 | 0.858280 | 9.182749e-63 | -8.615850e-47 |
| Msa0277450 | Msa1277490 | 0.832504 | 9.102704e-56 | -8.615850e-47 |
| Msa0277450 | Msa1298370 | 0.821535 | 3.834062e-53 | -8.615850e-47 |
| Msa0277450 | Msa1303240 | 0.819239 | 1.289418e-52 | -8.615850e-47 |
| Msa0277450 | Msa1303250 | 0.816994 | 4.151002e-52 | -8.615850e-47 |
| Msa0277450 | Msa1329050 | -0.807391 | 5.172992e-50 | -8.615850e-47 |
| Msa0277450 | Msa1332760 | 0.842471 | 2.534584e-58 | -8.615850e-47 |
| Msa0277450 | Msa1345100 | 0.810449 | 1.146422e-50 | -8.615850e-47 |
| Msa0277450 | Msa1348090 | 0.804992 | 1.654859e-49 | -8.615850e-47 |
| Msa0277450 | Msa1353980 | 0.826529 | 2.580652e-54 | -8.615850e-47 |
| Msa0277450 | Msa1356830 | 0.817794 | 2.741411e-52 | -8.615850e-47 |
| Msa0277450 | Msa1358480 | 0.834002 | 3.854666e-56 | -8.615850e-47 |
| Msa0277450 | Msa1360980 | 0.868703 | 5.361431e-66 | -8.615850e-47 |
| Msa0277450 | Msa1361400 | 0.837001 | 6.724922e-57 | -8.615850e-47 |
| Msa0277450 | Msa1361410 | 0.823128 | 1.636797e-53 | -8.615850e-47 |
| Msa0277450 | Msa1362420 | 0.800790 | 1.221492e-48 | -8.615850e-47 |
| Msa0277450 | Msa1363330 | 0.832341 | 9.991887e-56 | -8.615850e-47 |
| Msa0277450 | Msa1364210 | 0.803643 | 3.160519e-49 | -8.615850e-47 |
| Msa0277450 | Msa1369150 | 0.823813 | 1.131472e-53 | -8.615850e-47 |
| Msa0277450 | Msa1371520 | 0.811690 | 6.172586e-51 | -8.615850e-47 |
| Msa0277450 | Msa1373100 | 0.854854 | 9.326884e-62 | -8.615850e-47 |
| Msa0277450 | Msa1373820 | 0.801779 | 7.664584e-49 | -8.615850e-47 |
| Msa0277450 | Msa1374060 | 0.816410 | 5.611544e-52 | -8.615850e-47 |
| Msa0277450 | Msa1375460 | 0.804549 | 2.048056e-49 | -8.615850e-47 |
| Msa0277450 | Msa1376090 | -0.810760 | 9.819894e-51 | -8.615850e-47 |
| Msa0277450 | Msa1376650 | 0.804873 | 1.752971e-49 | -8.615850e-47 |
| Msa0277450 | Msa1377540 | -0.817595 | 3.040224e-52 | -8.615850e-47 |
| Msa0277450 | Msa1379760 | 0.803941 | 2.741746e-49 | -8.615850e-47 |
| Msa0277450 | Msa1382560 | 0.827311 | 1.678081e-54 | -8.615850e-47 |
| Msa0277450 | Msa1384870 | 0.809924 | 1.487724e-50 | -8.615850e-47 |
| Msa0277450 | Msa1385890 | 0.848513 | 5.842926e-60 | -8.615850e-47 |
| Msa0277450 | Msa1386600 | 0.832894 | 7.285766e-56 | -8.615850e-47 |
| Msa0277450 | Msa1386710 | 0.992974 | 1.238220e-196 | -8.615850e-47 |
| Msa0277450 | Msa1400610 | -0.802028 | 6.811707e-49 | -8.615850e-47 |
| Msa0277450 | Msa1411950 | 0.804876 | 1.749787e-49 | -8.615850e-47 |
| Msa0277450 | Msa1416370 | 0.802159 | 6.403092e-49 | -8.615850e-47 |
| Msa0277450 | Msa1422950 | 0.854869 | 9.232164e-62 | -8.615850e-47 |
| Msa0277450 | Msa1423350 | 0.843871 | 1.072982e-58 | -8.615850e-47 |
| Msa0277450 | Msa1425880 | 0.819614 | 1.058970e-52 | -8.615850e-47 |
| Msa0277450 | Msa1432500 | 0.806123 | 9.581948e-50 | -8.615850e-47 |
| Msa0277450 | Msa1437940 | 0.826327 | 2.883003e-54 | -8.615850e-47 |
| Msa0277450 | Msa1439610 | 0.813024 | 3.154743e-51 | -8.615850e-47 |
| Msa0277450 | Msa1440310 | 0.837583 | 4.770847e-57 | -8.615850e-47 |
| Msa0277450 | Msa1440960 | 0.809640 | 1.712096e-50 | -8.615850e-47 |
| Msa0277450 | Msa1443930 | 0.836549 | 8.767638e-57 | -8.615850e-47 |
| Msa0277450 | Msa1444510 | 0.818069 | 2.375790e-52 | -8.615850e-47 |
| Msa0277450 | Msa1445390 | -0.819120 | 1.372198e-52 | -8.615850e-47 |
| Msa0277450 | Msa1446810 | 0.817353 | 3.446454e-52 | -8.615850e-47 |
| Msa0277450 | Msa1446820 | 0.817278 | 3.581867e-52 | -8.615850e-47 |
| Msa0277450 | Msa1449340 | -0.826601 | 2.480888e-54 | -8.615850e-47 |
| Msa0277450 | Msa1451160 | 0.847455 | 1.144312e-59 | -8.615850e-47 |
| Msa0277450 | Msa1464810 | 0.817986 | 2.480214e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277450 | MtrunA17_Chr2g0290281 | 98.895 | 181 | 2 | 0 | 21 | 201 | 1 | 181 | 6.79e-128 | 357 |
| Msa0277450 | MtrunA17_Chr4g0072591 | 29.379 | 177 | 120 | 2 | 24 | 195 | 1 | 177 | 4.42e-24 | 94.0 |
| Msa0277450 | MtrunA17_Chr3g0109681 | 32.317 | 164 | 101 | 3 | 28 | 191 | 42 | 195 | 3.02e-21 | 87.4 |
| Msa0277450 | MtrunA17_Chr5g0433491 | 30.909 | 165 | 104 | 4 | 28 | 191 | 34 | 189 | 1.01e-18 | 80.5 |
| Msa0277450 | MtrunA17_Chr4g0021111 | 30.822 | 146 | 85 | 3 | 29 | 171 | 6 | 138 | 3.23e-15 | 70.1 |
| Msa0277450 | MtrunA17_Chr7g0231191 | 26.316 | 171 | 116 | 4 | 28 | 198 | 19 | 179 | 6.91e-14 | 67.0 |
| Msa0277450 | MtrunA17_Chr8g0340351 | 29.814 | 161 | 104 | 3 | 26 | 177 | 33 | 193 | 1.96e-12 | 63.5 |
| Msa0277450 | MtrunA17_Chr7g0217691 | 26.744 | 172 | 118 | 3 | 20 | 189 | 20 | 185 | 4.78e-12 | 62.0 |
| Msa0277450 | MtrunA17_Chr7g0268681 | 27.895 | 190 | 122 | 6 | 9 | 191 | 5 | 186 | 1.08e-11 | 61.2 |
| Msa0277450 | MtrunA17_Chr4g0066711 | 31.410 | 156 | 104 | 3 | 32 | 187 | 29 | 181 | 1.80e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277450 | AT2G35760.1 | 68.718 | 195 | 60 | 1 | 1 | 195 | 1 | 194 | 1.91e-87 | 256 |
| Msa0277450 | AT4G16442.1 | 61.798 | 178 | 68 | 0 | 21 | 198 | 1 | 178 | 1.70e-79 | 235 |
| Msa0277450 | AT4G25830.1 | 35.294 | 170 | 104 | 3 | 27 | 195 | 3 | 167 | 3.03e-23 | 91.7 |
| Msa0277450 | AT1G17200.1 | 30.814 | 172 | 111 | 3 | 28 | 199 | 30 | 193 | 2.75e-22 | 90.1 |
| Msa0277450 | AT3G14380.1 | 29.240 | 171 | 103 | 3 | 23 | 188 | 15 | 172 | 5.60e-15 | 70.1 |
| Msa0277450 | AT4G15610.1 | 31.098 | 164 | 97 | 3 | 9 | 167 | 16 | 168 | 2.83e-14 | 68.6 |
| Msa0277450 | AT5G15290.1 | 28.000 | 150 | 103 | 2 | 23 | 170 | 20 | 166 | 9.64e-14 | 67.0 |
| Msa0277450 | AT4G15630.1 | 27.011 | 174 | 120 | 2 | 17 | 187 | 20 | 189 | 1.45e-11 | 61.2 |
| Msa0277450 | AT1G03700.1 | 29.710 | 138 | 87 | 2 | 29 | 166 | 7 | 134 | 2.13e-11 | 60.1 |
| Msa0277450 | AT4G03540.1 | 29.839 | 124 | 77 | 2 | 48 | 171 | 26 | 139 | 6.35e-11 | 58.9 |
Find 57 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATCTGGTTTAGCATTTA+AGG | 0.092229 | 2_3:-10026444 | None:intergenic |
| CTTATAATCACTTTCTTTCT+AGG | 0.144389 | 2_3:+10026333 | Msa0277450:five_prime_UTR |
| TTAATGATTCATGTAATTAT+AGG | 0.216861 | 2_3:+10026480 | Msa0277450:five_prime_UTR |
| GGTCAAGAATGGAGGCTTCT+AGG | 0.310942 | 2_3:-10026547 | None:intergenic |
| TCATCCATTGCAATTGTTCC+TGG | 0.311139 | 2_3:-10028569 | None:intergenic |
| AGGTTTGTGAATCTTGGTTT+AGG | 0.330696 | 2_3:+10026823 | Msa0277450:CDS |
| AAATTGCAAAACAACCAAAT+TGG | 0.332368 | 2_3:-10028822 | None:intergenic |
| ATGTTCTAATGCTTATTAAT+TGG | 0.333637 | 2_3:+10028930 | Msa0277450:three_prime_UTR |
| ACATCTCAAACCTTGAATTA+AGG | 0.337420 | 2_3:-10027190 | None:intergenic |
| TAATAAACTTTACAGGTTCC+TGG | 0.340752 | 2_3:+10027137 | Msa0277450:intron |
| AATAGGTCTGTTCTGACATC+TGG | 0.349404 | 2_3:-10026458 | None:intergenic |
| TTCAGTCTCTTCCGTTTGTA+TGG | 0.355002 | 2_3:+10028696 | Msa0277450:CDS |
| AATTACATGAATCATTAAAT+AGG | 0.356990 | 2_3:-10026475 | None:intergenic |
| TGTGTAGTGAGTATGATTAA+AGG | 0.372404 | 2_3:+10027210 | Msa0277450:CDS |
| TTAGTATAAGTTAATATCAT+AGG | 0.383186 | 2_3:+10028752 | Msa0277450:three_prime_UTR |
| ATGTTTGTACTATGATAAAC+AGG | 0.392867 | 2_3:-10026757 | None:intergenic |
| ATCTGCTGTGTTTGCAAAGA+TGG | 0.404743 | 2_3:+10028545 | Msa0277450:CDS |
| TGATAAACAGGAACAGTTCC+AGG | 0.407224 | 2_3:-10026745 | None:intergenic |
| GCTGGTTACTCCTTAATTCA+AGG | 0.432706 | 2_3:+10027180 | Msa0277450:CDS |
| TCTTCCTAGACATACAATAA+AGG | 0.438918 | 2_3:+10026378 | Msa0277450:five_prime_UTR |
| TTTCAACAAGCCCTTAGCTT+GGG | 0.448248 | 2_3:+10027242 | Msa0277450:CDS |
| GAATTTAGCTTTCTTCTGAA+TGG | 0.449071 | 2_3:-10026899 | None:intergenic |
| TTATAATCACTTTCTTTCTA+GGG | 0.458569 | 2_3:+10026334 | Msa0277450:five_prime_UTR |
| AGAAAATATAGCCCAAGCTA+AGG | 0.484898 | 2_3:-10027253 | None:intergenic |
| TTCTGCAACCAAGTTGGAGA+AGG | 0.490439 | 2_3:+10028615 | Msa0277450:CDS |
| TAGCTAACCCTTCTCCAACT+TGG | 0.494841 | 2_3:-10028623 | None:intergenic |
| ATGTCTAGGAAGAAGTAGTA+AGG | 0.497198 | 2_3:-10026368 | None:intergenic |
| ATGAAGATATGCAATATGTA+TGG | 0.503142 | 2_3:+10028588 | Msa0277450:CDS |
| GTTGCTAATGCTATAACTGC+TGG | 0.511879 | 2_3:+10027162 | Msa0277450:CDS |
| GTGTGACAAGTGGTCAAGAA+TGG | 0.513241 | 2_3:-10026558 | None:intergenic |
| AGCTAAATTCACTGACATGA+AGG | 0.513279 | 2_3:+10026912 | Msa0277450:CDS |
| GGAAAATTCTGCAACCAAGT+TGG | 0.516285 | 2_3:+10028609 | Msa0277450:CDS |
| CATGAAAGTGTTGGATAGGA+GGG | 0.520852 | 2_3:+10026777 | Msa0277450:CDS |
| CAAACATGAAAGTGTTGGAT+AGG | 0.521116 | 2_3:+10026773 | Msa0277450:CDS |
| TTGGGTGTAGGTGTTAGTCC+TGG | 0.521914 | 2_3:+10026727 | Msa0277450:CDS |
| ACATGAAAGTGTTGGATAGG+AGG | 0.523051 | 2_3:+10026776 | Msa0277450:CDS |
| GAGGGTTAGAATAACTGAGT+TGG | 0.530374 | 2_3:+10026795 | Msa0277450:CDS |
| AGCTCCTTTATTGTATGTCT+AGG | 0.530684 | 2_3:-10026382 | None:intergenic |
| GGCTTCTAGGACAGAGAAAG+AGG | 0.531910 | 2_3:-10026534 | None:intergenic |
| ATGATACTACCACCATACTA+AGG | 0.534220 | 2_3:-10028662 | None:intergenic |
| TTTGGTTAGCCTTAGTATGG+TGG | 0.542187 | 2_3:+10028653 | Msa0277450:CDS |
| GAAAATATAGCCCAAGCTAA+GGG | 0.555703 | 2_3:-10027252 | None:intergenic |
| AAAATGAGTTACTTGGGTGT+AGG | 0.573937 | 2_3:+10026715 | Msa0277450:exon |
| TCTGCAACCAAGTTGGAGAA+GGG | 0.578467 | 2_3:+10028616 | Msa0277450:CDS |
| AGTCTCTTCCGTTTGTATGG+TGG | 0.581332 | 2_3:+10028699 | Msa0277450:CDS |
| TCTGCTGTGTTTGCAAAGAT+GGG | 0.593013 | 2_3:+10028546 | Msa0277450:CDS |
| TGTGTTTGCAAAGATGGGCC+AGG | 0.595653 | 2_3:+10028551 | Msa0277450:CDS |
| ATGTATGTAGTTGTAGTGAA+TGG | 0.599094 | 2_3:+10028864 | Msa0277450:three_prime_UTR |
| TAGTACAAACATGAAAGTGT+TGG | 0.606008 | 2_3:+10026768 | Msa0277450:CDS |
| TGGGCCAGGAACAATTGCAA+TGG | 0.614108 | 2_3:+10028565 | Msa0277450:CDS |
| GGTCCTAAACAAAAGAAATG+TGG | 0.615080 | 2_3:+10026281 | None:intergenic |
| TGACAAGTGGTCAAGAATGG+AGG | 0.634675 | 2_3:-10026555 | None:intergenic |
| AAGAAAACAGTGGATTTGAG+TGG | 0.671545 | 2_3:-10028797 | None:intergenic |
| CAAATTGGCCAAGAAAACAG+TGG | 0.680213 | 2_3:-10028807 | None:intergenic |
| GGTAATGGCATATATAACAG+TGG | 0.698046 | 2_3:+10028500 | Msa0277450:intron |
| TTATAGCATTAGCAACAACC+AGG | 0.720662 | 2_3:-10027155 | None:intergenic |
| ATGCTGCAAAGTGTGACAAG+TGG | 0.721365 | 2_3:-10026568 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAACATGTTTATTAAAATA+AGG | - | chr2_3:10028130-10028149 | None:intergenic | 10.0% |
| !! | AATTACATGAATCATTAAAT+AGG | - | chr2_3:10026478-10026497 | None:intergenic | 15.0% |
| !! | TTAATGATTCATGTAATTAT+AGG | + | chr2_3:10026480-10026499 | Msa0277450:five_prime_UTR | 15.0% |
| !!! | TCTGATAAAATTTAAAACAT+TGG | - | chr2_3:10026974-10026993 | None:intergenic | 15.0% |
| !! | GATGAAAAAAATAGTTATAA+TGG | - | chr2_3:10027054-10027073 | None:intergenic | 15.0% |
| !! | TTATTAAAACCATCAAAATT+GGG | - | chr2_3:10027123-10027142 | None:intergenic | 15.0% |
| !! | TTTATTAAAACCATCAAAAT+TGG | - | chr2_3:10027124-10027143 | None:intergenic | 15.0% |
| !!! | AATAAATGTATGTTTTATGT+TGG | - | chr2_3:10028010-10028029 | None:intergenic | 15.0% |
| !! | ATACATACATATAAAAGTTA+TGG | - | chr2_3:10028477-10028496 | None:intergenic | 15.0% |
| !! | TTAGTATAAGTTAATATCAT+AGG | + | chr2_3:10028752-10028771 | Msa0277450:three_prime_UTR | 15.0% |
| !! | TTATAATCACTTTCTTTCTA+GGG | + | chr2_3:10026334-10026353 | Msa0277450:five_prime_UTR | 20.0% |
| !! | TGAAAAGAAAGAAAAAAATG+TGG | - | chr2_3:10026415-10026434 | None:intergenic | 20.0% |
| !!! | ATGGTTTTAATAAACTTTAC+AGG | + | chr2_3:10027130-10027149 | Msa0277450:intron | 20.0% |
| !!! | TTTTTGTTTATAATAGTGAC+CGG | + | chr2_3:10027674-10027693 | Msa0277450:intron | 20.0% |
| !! | TTTCAAACAACAAACTAAAT+AGG | - | chr2_3:10027937-10027956 | None:intergenic | 20.0% |
| !!! | AATAGATATGCTCTAAAAAA+TGG | + | chr2_3:10028051-10028070 | Msa0277450:intron | 20.0% |
| !!! | AAACCCTAAAGATTTTTATA+AGG | + | chr2_3:10028104-10028123 | Msa0277450:intron | 20.0% |
| !!! | CTTATTTTCATAAGCATTTT+AGG | - | chr2_3:10028338-10028357 | None:intergenic | 20.0% |
| !! | ATGTTCTAATGCTTATTAAT+TGG | + | chr2_3:10028930-10028949 | Msa0277450:three_prime_UTR | 20.0% |
| ! | CTTATAATCACTTTCTTTCT+AGG | + | chr2_3:10026333-10026352 | Msa0277450:five_prime_UTR | 25.0% |
| ! | AAGAGGTTAAGTAAGAAAAA+AGG | - | chr2_3:10026520-10026539 | None:intergenic | 25.0% |
| !!! | TGTGAGTGTTGTTTTTTTTA+AGG | + | chr2_3:10026691-10026710 | Msa0277450:five_prime_UTR | 25.0% |
| ! | TTAAGGAAAAATGAGTTACT+TGG | + | chr2_3:10026708-10026727 | Msa0277450:exon | 25.0% |
| ! | TAAGGAAAAATGAGTTACTT+GGG | + | chr2_3:10026709-10026728 | Msa0277450:exon | 25.0% |
| ! | ATGTTTGTACTATGATAAAC+AGG | - | chr2_3:10026760-10026779 | None:intergenic | 25.0% |
| ! | TTTAGTGTATGTTTGTGAAT+TGG | + | chr2_3:10027336-10027355 | Msa0277450:intron | 25.0% |
| ! | TTGTGAATTGGACAAAATTA+TGG | + | chr2_3:10027348-10027367 | Msa0277450:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr2_3:10027564-10027583 | None:intergenic | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | + | chr2_3:10027599-10027618 | Msa0277450:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr2_3:10027599-10027618 | None:intergenic | 25.0% |
| !!! | AGTTAGTTTTAGAGATTAAG+AGG | - | chr2_3:10027820-10027839 | None:intergenic | 25.0% |
| ! | ACCTAATTGATATTGATGTT+AGG | + | chr2_3:10027844-10027863 | Msa0277450:intron | 25.0% |
| ! | TCCTAACATCAATATCAATT+AGG | - | chr2_3:10027848-10027867 | None:intergenic | 25.0% |
| ! | TATACTTACTACCATAATTG+AGG | + | chr2_3:10027891-10027910 | Msa0277450:intron | 25.0% |
| ! | ATACTTACTACCATAATTGA+GGG | + | chr2_3:10027892-10027911 | Msa0277450:intron | 25.0% |
| !!! | TTTGTTGTTTGAAATGAACA+TGG | + | chr2_3:10027943-10027962 | Msa0277450:intron | 25.0% |
| ! | GTTATTAAAAAGTGGGTATA+TGG | + | chr2_3:10027968-10027987 | Msa0277450:intron | 25.0% |
| !! | AGGCCTTATAAAAATCTTTA+GGG | - | chr2_3:10028110-10028129 | None:intergenic | 25.0% |
| !! | AAGGCCTTATAAAAATCTTT+AGG | - | chr2_3:10028111-10028130 | None:intergenic | 25.0% |
| ! | CAACTTATAACTTACGAAAA+CGG | - | chr2_3:10028232-10028251 | None:intergenic | 25.0% |
| ! | AATAAGCCGAAAATAGTTTA+TGG | + | chr2_3:10028352-10028371 | Msa0277450:intron | 25.0% |
| !! | ACATGTCCATAAACTATTTT+CGG | - | chr2_3:10028361-10028380 | None:intergenic | 25.0% |
| !! | TTTTCAGAAACTCTTCTAAA+TGG | + | chr2_3:10028390-10028409 | Msa0277450:intron | 25.0% |
| !! | ACTTTTATATGTATGTATGC+AGG | + | chr2_3:10028479-10028498 | Msa0277450:intron | 25.0% |
| ! | ATGAAGATATGCAATATGTA+TGG | + | chr2_3:10028588-10028607 | Msa0277450:CDS | 25.0% |
| ! | GCAAAATTAAAAATGCGTAT+TGG | + | chr2_3:10028724-10028743 | Msa0277450:CDS | 25.0% |
| !! | ATTAAAAATGCGTATTGGTA+AGG | + | chr2_3:10028729-10028748 | Msa0277450:CDS | 25.0% |
| ! | AAATTGCAAAACAACCAAAT+TGG | - | chr2_3:10028825-10028844 | None:intergenic | 25.0% |
| !! | ATGCCACATTTCTTTTGTTT+AGG | - | chr2_3:10026287-10026306 | None:intergenic | 30.0% |
| TCTTCCTAGACATACAATAA+AGG | + | chr2_3:10026378-10026397 | Msa0277450:five_prime_UTR | 30.0% | |
| ! | TAGTACAAACATGAAAGTGT+TGG | + | chr2_3:10026768-10026787 | Msa0277450:CDS | 30.0% |
| !! | GAATTTAGCTTTCTTCTGAA+TGG | - | chr2_3:10026902-10026921 | None:intergenic | 30.0% |
| GACGTAAAAGTTAGTTATAC+TGG | + | chr2_3:10026992-10027011 | Msa0277450:intron | 30.0% | |
| ! | GAATATTGTCCCAATTTTGA+TGG | + | chr2_3:10027111-10027130 | Msa0277450:intron | 30.0% |
| TAATAAACTTTACAGGTTCC+TGG | + | chr2_3:10027137-10027156 | Msa0277450:intron | 30.0% | |
| ACATCTCAAACCTTGAATTA+AGG | - | chr2_3:10027193-10027212 | None:intergenic | 30.0% | |
| TGTGTAGTGAGTATGATTAA+AGG | + | chr2_3:10027210-10027229 | Msa0277450:CDS | 30.0% | |
| AGGTGAGTTTGAAAAAATCT+CGG | - | chr2_3:10027403-10027422 | None:intergenic | 30.0% | |
| !! | TTATTGCTTGTTTGTTATCG+AGG | - | chr2_3:10027423-10027442 | None:intergenic | 30.0% |
| TGATATTGATGTTAGGACTA+AGG | + | chr2_3:10027851-10027870 | Msa0277450:intron | 30.0% | |
| ATGGTAGTAAGTATACCTTA+TGG | - | chr2_3:10027886-10027905 | None:intergenic | 30.0% | |
| TACTTACTACCATAATTGAG+GGG | + | chr2_3:10027893-10027912 | Msa0277450:intron | 30.0% | |
| ACATGGCAGTTATTAAAAAG+TGG | + | chr2_3:10027960-10027979 | Msa0277450:intron | 30.0% | |
| CATGGCAGTTATTAAAAAGT+GGG | + | chr2_3:10027961-10027980 | Msa0277450:intron | 30.0% | |
| CAAAAAAAAATCTTCAGGGT+TGG | - | chr2_3:10028079-10028098 | None:intergenic | 30.0% | |
| !!! | CAACCCTGAAGATTTTTTTT+TGG | + | chr2_3:10028077-10028096 | Msa0277450:intron | 30.0% |
| CCTCCAAAAAAAAATCTTCA+GGG | - | chr2_3:10028083-10028102 | None:intergenic | 30.0% | |
| !!! | CCTGAAGATTTTTTTTTGGA+GGG | + | chr2_3:10028081-10028100 | Msa0277450:intron | 30.0% |
| CTTATTTCCAACAACTGTTT+AGG | - | chr2_3:10028269-10028288 | None:intergenic | 30.0% | |
| ATATGTATGTATGCAGGTAA+TGG | + | chr2_3:10028485-10028504 | Msa0277450:intron | 30.0% | |
| !!! | ATTTTTGGTTAGCCTTAGTA+TGG | + | chr2_3:10028650-10028669 | Msa0277450:CDS | 30.0% |
| !! | TGGTTGTTTTGCAATTTACA+AGG | + | chr2_3:10028828-10028847 | Msa0277450:three_prime_UTR | 30.0% |
| ATGTATGTAGTTGTAGTGAA+TGG | + | chr2_3:10028864-10028883 | Msa0277450:three_prime_UTR | 30.0% | |
| ATGTCTAGGAAGAAGTAGTA+AGG | - | chr2_3:10026371-10026390 | None:intergenic | 35.0% | |
| AGCTCCTTTATTGTATGTCT+AGG | - | chr2_3:10026385-10026404 | None:intergenic | 35.0% | |
| ! | GACATCTGGTTTAGCATTTA+AGG | - | chr2_3:10026447-10026466 | None:intergenic | 35.0% |
| AAAATGAGTTACTTGGGTGT+AGG | + | chr2_3:10026715-10026734 | Msa0277450:exon | 35.0% | |
| !! | CAAACATGAAAGTGTTGGAT+AGG | + | chr2_3:10026773-10026792 | Msa0277450:CDS | 35.0% |
| !!! | GAATAACTGAGTTGGTTTTG+AGG | + | chr2_3:10026803-10026822 | Msa0277450:CDS | 35.0% |
| !!! | GTTTTGAGGTTTGTGAATCT+TGG | + | chr2_3:10026817-10026836 | Msa0277450:CDS | 35.0% |
| AGGTTTGTGAATCTTGGTTT+AGG | + | chr2_3:10026823-10026842 | Msa0277450:CDS | 35.0% | |
| AGCTAAATTCACTGACATGA+AGG | + | chr2_3:10026912-10026931 | Msa0277450:CDS | 35.0% | |
| CTTGACATTATAGCGAATCA+TGG | + | chr2_3:10027087-10027106 | Msa0277450:intron | 35.0% | |
| TTATAGCATTAGCAACAACC+AGG | - | chr2_3:10027158-10027177 | None:intergenic | 35.0% | |
| GAAAATATAGCCCAAGCTAA+GGG | - | chr2_3:10027255-10027274 | None:intergenic | 35.0% | |
| AGAAAATATAGCCCAAGCTA+AGG | - | chr2_3:10027256-10027275 | None:intergenic | 35.0% | |
| !! | TTAGCTTGGGCTATATTTTC+TGG | + | chr2_3:10027255-10027274 | Msa0277450:CDS | 35.0% |
| TTGATCAATTATACACCCTC+CGG | + | chr2_3:10027542-10027561 | Msa0277450:intron | 35.0% | |
| TTGTTTATAATAGTGACCGG+AGG | + | chr2_3:10027677-10027696 | Msa0277450:intron | 35.0% | |
| TGTTTATAATAGTGACCGGA+GGG | + | chr2_3:10027678-10027697 | Msa0277450:intron | 35.0% | |
| TGCTTGATAAGACAAACTTG+AGG | - | chr2_3:10027777-10027796 | None:intergenic | 35.0% | |
| CTAAGGAATCATTCACCATA+AGG | + | chr2_3:10027868-10027887 | Msa0277450:intron | 35.0% | |
| ATTGTGATACCCCTCAATTA+TGG | - | chr2_3:10027905-10027924 | None:intergenic | 35.0% | |
| AAGTGGGTATATGGTAGATA+TGG | + | chr2_3:10027977-10027996 | Msa0277450:intron | 35.0% | |
| !!! | CCCTGAAGATTTTTTTTTGG+AGG | + | chr2_3:10028080-10028099 | Msa0277450:intron | 35.0% |
| CCCTCCAAAAAAAAATCTTC+AGG | - | chr2_3:10028084-10028103 | None:intergenic | 35.0% | |
| CATCTATCCTAAACAGTTGT+TGG | + | chr2_3:10028259-10028278 | Msa0277450:intron | 35.0% | |
| ! | CTTCTAAATGGTCTTACAAG+TGG | + | chr2_3:10028402-10028421 | Msa0277450:intron | 35.0% |
| ! | GGTAATGGCATATATAACAG+TGG | + | chr2_3:10028500-10028519 | Msa0277450:intron | 35.0% |
| ATGATACTACCACCATACTA+AGG | - | chr2_3:10028665-10028684 | None:intergenic | 35.0% | |
| ! | TTTTGCTACCACCATACAAA+CGG | - | chr2_3:10028710-10028729 | None:intergenic | 35.0% |
| ! | AAGAAAACAGTGGATTTGAG+TGG | - | chr2_3:10028800-10028819 | None:intergenic | 35.0% |
| ! | ACTCAAATCCACTGTTTTCT+TGG | + | chr2_3:10028799-10028818 | Msa0277450:three_prime_UTR | 35.0% |
| AATAGGTCTGTTCTGACATC+TGG | - | chr2_3:10026461-10026480 | None:intergenic | 40.0% | |
| TGATAAACAGGAACAGTTCC+AGG | - | chr2_3:10026748-10026767 | None:intergenic | 40.0% | |
| !! | ACATGAAAGTGTTGGATAGG+AGG | + | chr2_3:10026776-10026795 | Msa0277450:CDS | 40.0% |
| !! | CATGAAAGTGTTGGATAGGA+GGG | + | chr2_3:10026777-10026796 | Msa0277450:CDS | 40.0% |
| GAGGGTTAGAATAACTGAGT+TGG | + | chr2_3:10026795-10026814 | Msa0277450:CDS | 40.0% | |
| GTTGCTAATGCTATAACTGC+TGG | + | chr2_3:10027162-10027181 | Msa0277450:CDS | 40.0% | |
| GCTGGTTACTCCTTAATTCA+AGG | + | chr2_3:10027180-10027199 | Msa0277450:CDS | 40.0% | |
| ! | TTTTCAACAAGCCCTTAGCT+TGG | + | chr2_3:10027241-10027260 | Msa0277450:CDS | 40.0% |
| TTTCAACAAGCCCTTAGCTT+GGG | + | chr2_3:10027242-10027261 | Msa0277450:CDS | 40.0% | |
| !! | GGCTATATTTTCTGGTGATC+AGG | + | chr2_3:10027263-10027282 | Msa0277450:CDS | 40.0% |
| !!! | GCGTCTGTTTTTAGTGTACA+AGG | + | chr2_3:10027461-10027480 | Msa0277450:intron | 40.0% |
| TGCTTATAATAGTGACCGGA+GGG | - | chr2_3:10027560-10027579 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr2_3:10027561-10027580 | None:intergenic | 40.0% | |
| TTACTATTGCATACACCCTC+CGG | - | chr2_3:10027696-10027715 | None:intergenic | 40.0% | |
| TTAGAGATTAAGAGGTCCCA+CGG | - | chr2_3:10027812-10027831 | None:intergenic | 40.0% | |
| ATCTGCTGTGTTTGCAAAGA+TGG | + | chr2_3:10028545-10028564 | Msa0277450:CDS | 40.0% | |
| TCTGCTGTGTTTGCAAAGAT+GGG | + | chr2_3:10028546-10028565 | Msa0277450:CDS | 40.0% | |
| TCATCCATTGCAATTGTTCC+TGG | - | chr2_3:10028572-10028591 | None:intergenic | 40.0% | |
| GGAAAATTCTGCAACCAAGT+TGG | + | chr2_3:10028609-10028628 | Msa0277450:CDS | 40.0% | |
| !!! | AGGGTTAGCTAGTGCATTTT+TGG | + | chr2_3:10028635-10028654 | Msa0277450:CDS | 40.0% |
| !! | TTTGGTTAGCCTTAGTATGG+TGG | + | chr2_3:10028653-10028672 | Msa0277450:CDS | 40.0% |
| TTCAGTCTCTTCCGTTTGTA+TGG | + | chr2_3:10028696-10028715 | Msa0277450:CDS | 40.0% | |
| CAAATTGGCCAAGAAAACAG+TGG | - | chr2_3:10028810-10028829 | None:intergenic | 40.0% | |
| ! | CACTGTTTTCTTGGCCAATT+TGG | + | chr2_3:10028808-10028827 | Msa0277450:three_prime_UTR | 40.0% |
| TGACAAGTGGTCAAGAATGG+AGG | - | chr2_3:10026558-10026577 | None:intergenic | 45.0% | |
| GTGTGACAAGTGGTCAAGAA+TGG | - | chr2_3:10026561-10026580 | None:intergenic | 45.0% | |
| ATGCTGCAAAGTGTGACAAG+TGG | - | chr2_3:10026571-10026590 | None:intergenic | 45.0% | |
| AAGCAATGTAACCAGTACCG+TGG | + | chr2_3:10027792-10027811 | Msa0277450:intron | 45.0% | |
| AGCAATGTAACCAGTACCGT+GGG | + | chr2_3:10027793-10027812 | Msa0277450:intron | 45.0% | |
| ! | TTCTGCAACCAAGTTGGAGA+AGG | + | chr2_3:10028615-10028634 | Msa0277450:CDS | 45.0% |
| ! | TCTGCAACCAAGTTGGAGAA+GGG | + | chr2_3:10028616-10028635 | Msa0277450:CDS | 45.0% |
| TAGCTAACCCTTCTCCAACT+TGG | - | chr2_3:10028626-10028645 | None:intergenic | 45.0% | |
| AGTCTCTTCCGTTTGTATGG+TGG | + | chr2_3:10028699-10028718 | Msa0277450:CDS | 45.0% | |
| !! | GGCTTCTAGGACAGAGAAAG+AGG | - | chr2_3:10026537-10026556 | None:intergenic | 50.0% |
| GGTCAAGAATGGAGGCTTCT+AGG | - | chr2_3:10026550-10026569 | None:intergenic | 50.0% | |
| TTGGGTGTAGGTGTTAGTCC+TGG | + | chr2_3:10026727-10026746 | Msa0277450:CDS | 50.0% | |
| ATTAAGAGGTCCCACGGTAC+TGG | - | chr2_3:10027806-10027825 | None:intergenic | 50.0% | |
| TGTGTTTGCAAAGATGGGCC+AGG | + | chr2_3:10028551-10028570 | Msa0277450:CDS | 50.0% | |
| TGGGCCAGGAACAATTGCAA+TGG | + | chr2_3:10028565-10028584 | Msa0277450:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 10026282 | 10028984 | 10026282 | ID=Msa0277450;Name=Msa0277450 |
| chr2_3 | mRNA | 10026282 | 10028984 | 10026282 | ID=Msa0277450-mRNA-1;Parent=Msa0277450;Name=Msa0277450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=436|1|1|1|1|1|3|235|201 |
| chr2_3 | exon | 10026282 | 10026941 | 10026282 | ID=Msa0277450-mRNA-1:exon:4456;Parent=Msa0277450-mRNA-1 |
| chr2_3 | exon | 10027152 | 10027284 | 10027152 | ID=Msa0277450-mRNA-1:exon:4457;Parent=Msa0277450-mRNA-1 |
| chr2_3 | exon | 10028501 | 10028984 | 10028501 | ID=Msa0277450-mRNA-1:exon:4458;Parent=Msa0277450-mRNA-1 |
| chr2_3 | five_prime_UTR | 10026282 | 10026717 | 10026282 | ID=Msa0277450-mRNA-1:five_prime_utr;Parent=Msa0277450-mRNA-1 |
| chr2_3 | CDS | 10026718 | 10026941 | 10026718 | ID=Msa0277450-mRNA-1:cds;Parent=Msa0277450-mRNA-1 |
| chr2_3 | CDS | 10027152 | 10027284 | 10027152 | ID=Msa0277450-mRNA-1:cds;Parent=Msa0277450-mRNA-1 |
| chr2_3 | CDS | 10028501 | 10028749 | 10028501 | ID=Msa0277450-mRNA-1:cds;Parent=Msa0277450-mRNA-1 |
| chr2_3 | three_prime_UTR | 10028750 | 10028984 | 10028750 | ID=Msa0277450-mRNA-1:three_prime_utr;Parent=Msa0277450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
