AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1019240


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1019240 MtrunA17_Chr7g0234781 98.140 215 2 1 1 213 1 215 1.65e-151 428
Msa1019240 MtrunA17_Chr7g0234781 97.235 217 2 1 214 426 1 217 1.32e-150 426
Msa1019240 MtrunA17_Chr8g0339111 90.244 205 16 2 1 203 1 203 9.75e-120 347
Msa1019240 MtrunA17_Chr8g0339111 88.940 217 18 2 214 426 1 215 3.71e-117 340
Msa1019240 MtrunA17_Chr4g0006811 87.895 190 21 1 26 213 5 194 1.47e-116 338
Msa1019240 MtrunA17_Chr4g0006811 85.938 192 23 1 239 426 5 196 2.21e-114 333
Msa1019240 MtrunA17_Chr8g0339121 87.179 195 23 1 26 218 5 199 1.67e-112 329
Msa1019240 MtrunA17_Chr8g0339121 86.387 191 22 1 239 425 5 195 4.73e-109 320
Msa1019240 MtrunA17_Chr4g0006791 75.904 83 19 1 345 426 12 94 2.51e-35 125
Msa1019240 MtrunA17_Chr4g0006791 79.221 77 15 1 134 209 12 88 2.81e-34 123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1019240 AT5G59240.1 85.253 217 21 2 1 215 1 208 5.44e-122 353
Msa1019240 AT5G59240.1 83.415 205 21 2 214 414 1 196 6.75e-119 345
Msa1019240 AT5G20290.1 80.952 210 33 2 1 203 1 210 1.08e-104 310
Msa1019240 AT5G20290.1 80.180 222 35 2 214 426 1 222 6.89e-103 305

Find 124 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTACTGCTTTGATGTTT+TGG 0.212605 7_1:-40624331 Msa1019240:three_prime_UTR
TTCTTTGGTTTAGTGTTAAT+TGG 0.215750 7_1:-40624495 Msa1019240:intron
AGTAATTAAAGAGCAAAATT+TGG 0.217728 7_1:+40624442 None:intergenic
ATCCCATAGATATTGGTATT+TGG 0.228422 7_1:-40624570 Msa1019240:three_prime_UTR
TACCTCTGCAGAATCCTTCT+TGG 0.271014 7_1:+40625476 None:intergenic
CTAGACAGCTTAGTGTTTGC+TGG 0.273445 7_1:+40631390 None:intergenic
CATTTGTATCCCATAGATAT+TGG 0.281025 7_1:-40624577 Msa1019240:three_prime_UTR
GTACCAAATACCAATATCTA+TGG 0.285881 7_1:+40624567 None:intergenic
TTGTATGAACAGGTATTTCT+AGG 0.287281 7_1:-40632440 Msa1019240:intron
CACCTCTGCAGAATCCTTCT+TGG 0.295436 7_1:+40631098 None:intergenic
CTCGCCCTGGTCAATGTGGC+AGG 0.353391 7_1:-40630302 Msa1019240:CDS
CACGCCCTGGTCAATGTGGC+AGG 0.380048 7_1:-40624798 Msa1019240:CDS
GGTCAATGTGGCAGGGCTGA+TGG 0.387861 7_1:-40624790 Msa1019240:CDS
GGTCAATGTGGCAGGGCTGA+TGG 0.387861 7_1:-40630294 Msa1019240:CDS
ATAAGTAATATGAATAATAT+AGG 0.393952 7_1:+40624357 None:intergenic
TGGACACTGGAAATTTCTCT+TGG 0.405072 7_1:-40631305 Msa1019240:CDS
TTGAGCAGCGTCAGAAAGAT+AGG 0.420260 7_1:-40624882 Msa1019240:CDS
TTGAGCAGCGTCAGAAAGAT+AGG 0.420260 7_1:-40630386 Msa1019240:CDS
CTAGACAGCTTAGTGTTGGC+TGG 0.421456 7_1:+40625768 None:intergenic
AGACGGAGAGGAAGAGGGTT+AGG 0.423514 7_1:-40632590 Msa1019240:five_prime_UTR
GGACACTGGAAATTTCTCTT+GGG 0.433354 7_1:-40631304 Msa1019240:CDS
GTCAGGAGAATCCGTGTTAG+AGG 0.433718 7_1:-40625735 Msa1019240:CDS
GTCAATGTGGCAGGGCTGAT+GGG 0.439498 7_1:-40624789 Msa1019240:intron
GTCAATGTGGCAGGGCTGAT+GGG 0.439498 7_1:-40630293 Msa1019240:intron
GTCAGGAGGATCCGTGTTAG+AGG 0.444512 7_1:-40631357 Msa1019240:CDS
TCCAATAGGTACATTCTTGA+AGG 0.448248 7_1:-40624691 Msa1019240:intron
TCCAATAGGTACATTCTTGA+AGG 0.448248 7_1:-40630185 Msa1019240:intron
GCAGAGAGACGGAGAGGAAG+AGG 0.460646 7_1:-40632596 Msa1019240:five_prime_UTR
ACGAACAAGCTCATTGTTTG+AGG 0.460749 7_1:+40625608 None:intergenic
ACGAACAAGCTCATTGTTTG+AGG 0.460749 7_1:+40631230 None:intergenic
GCCTGCATTTCATCTCGCCC+TGG 0.462140 7_1:-40630315 Msa1019240:CDS
ACAGCTTAGTGTTGGCTGGC+TGG 0.467973 7_1:+40625772 None:intergenic
ACAGCTTAGTGTTTGCTGGC+TGG 0.473431 7_1:+40631394 None:intergenic
TCAGCCCTGCCACATTGACC+AGG 0.474891 7_1:+40624793 None:intergenic
TCAGCCCTGCCACATTGACC+AGG 0.474891 7_1:+40630297 None:intergenic
CAAGACTCGTCTTCTTGATG+TGG 0.476391 7_1:-40625640 Msa1019240:CDS
GCCTGCATTTCATCACGCCC+TGG 0.479375 7_1:-40624811 Msa1019240:CDS
TGTCTAGCAACAAGACAGTC+AGG 0.484105 7_1:-40625752 Msa1019240:CDS
TGTCTAGCAACAAGACAGTC+AGG 0.484105 7_1:-40631374 Msa1019240:CDS
ATGCACAAGAGGCGTGCCAC+TGG 0.486837 7_1:-40632411 Msa1019240:CDS
CATTCTTGAAGGTAAGGAGT+TGG 0.488645 7_1:-40624680 Msa1019240:CDS
AAAGAAAACATAAACTTGAA+TGG 0.495984 7_1:+40624545 None:intergenic
TGAAGATACCACTGCTTGAA+TGG 0.499687 7_1:+40631162 None:intergenic
TAGGTACATTCTTGAAGGTA+AGG 0.500539 7_1:-40624686 Msa1019240:CDS
TAGGTACATTCTTGAAGGTA+AGG 0.500539 7_1:-40630180 Msa1019240:CDS
TGAAGATACCACTGCTTGAA+TGG 0.502756 7_1:+40625540 None:intergenic
GCTTGTTCGTACTCAGACTC+TGG 0.506342 7_1:-40631217 Msa1019240:intron
ATTGAAGAGCAGTTCGGCGG+TGG 0.507577 7_1:-40624844 Msa1019240:CDS
CAGCACTACGGCGTTGAAGT+TGG 0.508667 7_1:-40625519 Msa1019240:CDS
TGAATGGAGCAGCATCAACT+TGG 0.511965 7_1:+40631178 None:intergenic
GTTGCTAGACAGCTTAGTGT+TGG 0.512620 7_1:+40625764 None:intergenic
TTAGAGGTGGCAATGTGAAA+TGG 0.513214 7_1:-40625719 Msa1019240:CDS
TTAGAGGTGGCAATGTGAAA+TGG 0.513214 7_1:-40631341 Msa1019240:CDS
AAGGTGAATCATACCCATCT+TGG 0.516233 7_1:+40632549 None:intergenic
CATTCTTGAAGGTAAGGAGC+TGG 0.520802 7_1:-40630174 Msa1019240:CDS
CAGCACTACGGTGTTGAAGT+TGG 0.523099 7_1:-40631141 Msa1019240:CDS
ATGCACAAGAGGCGTGCCAC+TGG 0.523144 7_1:-40626985 Msa1019240:CDS
GAAATGGAGAGCTCTTAGAT+TGG 0.523645 7_1:-40625703 Msa1019240:CDS
GAAATGGAGAGCTCTTAGAT+TGG 0.523645 7_1:-40631325 Msa1019240:CDS
ACCAGGGCGTGATGAAATGC+AGG 0.526557 7_1:+40624810 None:intergenic
GAGAGCAAGCTCCGCCAAGA+TGG 0.533873 7_1:-40632563 Msa1019240:exon
ATTGAAGAGCAGTTCGGTGG+TGG 0.534168 7_1:-40630348 Msa1019240:CDS
CTGGTGGCAAGAAGAAGAGC+TGG 0.534252 7_1:-40626966 Msa1019240:CDS
CTGGTGGCAAGAAGAAGAGC+TGG 0.534252 7_1:-40632392 Msa1019240:CDS
TCCCACATTGAAGAGCAGTT+CGG 0.538409 7_1:-40624850 Msa1019240:CDS
TGAATGGTGCAGCATCAACT+TGG 0.539497 7_1:+40625556 None:intergenic
GCTCTTCTTCTTGCCACCAG+TGG 0.539638 7_1:+40626969 None:intergenic
GCTCTTCTTCTTGCCACCAG+TGG 0.539638 7_1:+40632395 None:intergenic
TCCCACATTGAAGAGCAGTT+CGG 0.546947 7_1:-40630354 Msa1019240:CDS
AAAGAAAACAGCAGCCAAGA+AGG 0.547923 7_1:-40625490 Msa1019240:CDS
AAAGAAAACAGCAGCCAAGA+AGG 0.547923 7_1:-40631112 Msa1019240:CDS
TGTATGAACAGGTATTTCTA+GGG 0.550526 7_1:-40632439 Msa1019240:intron
TCGCCCTGGTCAATGTGGCA+GGG 0.554881 7_1:-40630301 Msa1019240:CDS
AGAGCAAGCTCCGCCAAGAT+GGG 0.554934 7_1:-40632562 Msa1019240:intron
CGCCGAACTGCTCTTCAATG+TGG 0.556342 7_1:+40624848 None:intergenic
ACCAGGGCGAGATGAAATGC+AGG 0.557367 7_1:+40630314 None:intergenic
AGTGGCACGCCTCTTGTGCA+TGG 0.560948 7_1:+40632413 None:intergenic
AATTTGCATAAAACTAGTAA+AGG 0.565064 7_1:+40624469 None:intergenic
TGCAGCATCAACTTGGACAA+TGG 0.565135 7_1:+40625563 None:intergenic
AGCAGCATCAACTTGGACAA+TGG 0.568376 7_1:+40631185 None:intergenic
TTTGCATATAAGACTAGTGA+AGG 0.572951 7_1:+40624387 None:intergenic
CAGAGAGACGGAGAGGAAGA+GGG 0.573739 7_1:-40632595 Msa1019240:five_prime_UTR
CACAAGAGGCGTGCCACTGG+TGG 0.574033 7_1:-40626982 Msa1019240:CDS
ACCGAACTGCTCTTCAATGT+GGG 0.574716 7_1:+40630353 None:intergenic
GCCGAACTGCTCTTCAATGT+GGG 0.578038 7_1:+40624849 None:intergenic
GTGAATCATACCCATCTTGG+CGG 0.584425 7_1:+40632552 None:intergenic
TACCAAATACCAATATCTAT+GGG 0.587108 7_1:+40624568 None:intergenic
CACCGAACTGCTCTTCAATG+TGG 0.587303 7_1:+40630352 None:intergenic
GACACTGGAAATTTCTCTTG+GGG 0.588786 7_1:-40631303 Msa1019240:CDS
CACAAGAGGCGTGCCACTGG+TGG 0.589648 7_1:-40632408 Msa1019240:CDS
GGTTTGTATAGGTACGAGCT+TGG 0.590987 7_1:-40625798 Msa1019240:intron
AAATTTCTCTTGGGGTAGTG+AGG 0.592656 7_1:-40631295 Msa1019240:CDS
ACACAGAATCAGCAGAGAGA+CGG 0.593540 7_1:-40632607 Msa1019240:five_prime_UTR
ACGCCCTGGTCAATGTGGCA+GGG 0.593939 7_1:-40624797 Msa1019240:CDS
CAAGACTCGTCTTCTCGATG+TGG 0.596566 7_1:-40631262 Msa1019240:CDS
TCACATTGCCACCTCTAACA+CGG 0.596796 7_1:+40631346 None:intergenic
TCACATTGCCACCTCTAACA+CGG 0.599964 7_1:+40625724 None:intergenic
AAATTTCTCGTGGGGTAGTG+AGG 0.601685 7_1:-40625673 Msa1019240:CDS
CAAGAGATTCTATGCACAAG+AGG 0.601927 7_1:-40626996 Msa1019240:CDS
CACATTGAAGAGCAGTTCGG+TGG 0.602058 7_1:-40630351 Msa1019240:CDS
GGGTTGTATAGGTACGAGCT+TGG 0.602072 7_1:-40631420 Msa1019240:intron
CAGTGGTATCTTCAGCACTA+CGG 0.602218 7_1:-40625531 Msa1019240:CDS
CAGTGGTATCTTCAGCACTA+CGG 0.606289 7_1:-40631153 Msa1019240:CDS
TGGACACTGGAAATTTCTCG+TGG 0.606783 7_1:-40625683 Msa1019240:CDS
GGACACTGGAAATTTCTCGT+GGG 0.613954 7_1:-40625682 Msa1019240:CDS
CACATTGAAGAGCAGTTCGG+CGG 0.615554 7_1:-40624847 Msa1019240:CDS
GACACTGGAAATTTCTCGTG+GGG 0.616779 7_1:-40625681 Msa1019240:CDS
CAGCCCTGCCACATTGACCA+GGG 0.623121 7_1:+40630298 None:intergenic
AGCCAAGAAGGATTCTGCAG+AGG 0.628735 7_1:-40631100 Msa1019240:intron
AGCCAAGAAGGATTCTGCAG+AGG 0.633472 7_1:-40625478 Msa1019240:intron
AGGAGAATCCGTGTTAGAGG+TGG 0.633660 7_1:-40625732 Msa1019240:CDS
AGGAGGATCCGTGTTAGAGG+TGG 0.633660 7_1:-40631354 Msa1019240:CDS
CTAGGGATTCCATGCACAAG+AGG 0.633798 7_1:-40632422 Msa1019240:CDS
ATGCTGCTCCATTCAAGCAG+TGG 0.634513 7_1:-40631170 Msa1019240:CDS
GAATCAGCAGAGAGACGGAG+AGG 0.636802 7_1:-40632602 Msa1019240:five_prime_UTR
CAGCCCTGCCACATTGACCA+GGG 0.641454 7_1:+40624794 None:intergenic
ATGCTGCACCATTCAAGCAG+TGG 0.644432 7_1:-40625548 Msa1019240:CDS
TCATCTCGCCCTGGTCAATG+TGG 0.644879 7_1:-40630306 Msa1019240:CDS
TCATCACGCCCTGGTCAATG+TGG 0.654082 7_1:-40624802 Msa1019240:CDS
ACTACGGTGTTGAAGTTGGT+AGG 0.661832 7_1:-40631137 Msa1019240:CDS
ACTACGGCGTTGAAGTTGGT+AGG 0.664271 7_1:-40625515 Msa1019240:CDS
AGAGCTCTTAGATTGGACAC+TGG 0.691283 7_1:-40625696 Msa1019240:CDS
AGAGCTCTTAGATTGGACAC+TGG 0.691283 7_1:-40631318 Msa1019240:CDS
CTAGCAACAAGACAGTCAGG+AGG 0.730674 7_1:-40631371 Msa1019240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAGAATATTTCAAAAT+TGG + chr7_1:40627290-40627309 None:intergenic 10.0%
!! CTATTAAAAATCAAAATATA+AGG - chr7_1:40627303-40627322 Msa1019240:intron 10.0%
!! AAATAATTTATATACACTAT+CGG - chr7_1:40629043-40629062 Msa1019240:intron 10.0%
!!! ATTAGTTTATTAAATAGAAT+GGG + chr7_1:40629561-40629580 None:intergenic 10.0%
!!! TATTAGTTTATTAAATAGAA+TGG + chr7_1:40629562-40629581 None:intergenic 10.0%
!!! TGAAATTTTAATCTAATTAA+AGG + chr7_1:40631022-40631041 None:intergenic 10.0%
!! ATAAGTAATATGAATAATAT+AGG + chr7_1:40632568-40632587 None:intergenic 10.0%
!! AGCTTAAATAATAATTAACT+GGG + chr7_1:40625469-40625488 None:intergenic 15.0%
!! AAGCTTAAATAATAATTAAC+TGG + chr7_1:40625470-40625489 None:intergenic 15.0%
!! TAAAAGATTAATATTTGAGA+AGG + chr7_1:40625959-40625978 None:intergenic 15.0%
!!! ATATAATATTTGTTTCTTGA+TGG - chr7_1:40626045-40626064 Msa1019240:intron 15.0%
!!! GGTATTTAAGTTATTTTTAT+TGG - chr7_1:40626142-40626161 Msa1019240:intron 15.0%
!!! AAGTTATTTTTATTGGATAT+TGG - chr7_1:40626149-40626168 Msa1019240:intron 15.0%
!! ATAATCTATGTTTACTATTA+AGG - chr7_1:40626347-40626366 Msa1019240:intron 15.0%
!! TAATCTATGTTTACTATTAA+GGG - chr7_1:40626348-40626367 Msa1019240:intron 15.0%
!! ATTGTTAAATTTGATAAGAA+TGG + chr7_1:40628678-40628697 None:intergenic 15.0%
!!! CTCATTTTAAGTATTTATTT+TGG - chr7_1:40628976-40628995 Msa1019240:intron 15.0%
!!! TAAGTATTTATTTTGGAATT+TGG - chr7_1:40628983-40629002 Msa1019240:intron 15.0%
!! TTACTTTAATCATATAATCT+AGG - chr7_1:40629493-40629512 Msa1019240:intron 15.0%
!! TTAGTTTATTAAATAGAATG+GGG + chr7_1:40629560-40629579 None:intergenic 15.0%
!! ATACATAATTCGATAATAAA+TGG - chr7_1:40629785-40629804 Msa1019240:intron 15.0%
!!! TAAATTTAAGATGTTTTTGT+CGG - chr7_1:40631102-40631121 Msa1019240:CDS 15.0%
!! ATATATTATGTGTTTCTTAA+TGG - chr7_1:40631668-40631687 Msa1019240:intron 15.0%
!!! CTTTAAGTTATCATTTTAAT+TGG - chr7_1:40631765-40631784 Msa1019240:intron 15.0%
!!! TTATCATTTTAATTGGATAT+TGG - chr7_1:40631772-40631791 Msa1019240:intron 15.0%
!! TATATGTTAATATAAAGAGT+GGG + chr7_1:40631845-40631864 None:intergenic 15.0%
!! ATATATGTTAATATAAAGAG+TGG + chr7_1:40631846-40631865 None:intergenic 15.0%
!! TTAACATATATTTACCATTA+AGG - chr7_1:40631855-40631874 Msa1019240:intron 15.0%
!! TAACATATATTTACCATTAA+GGG - chr7_1:40631856-40631875 Msa1019240:intron 15.0%
!!! AAAAAAAGTTATGTTTTCTT+TGG - chr7_1:40632412-40632431 Msa1019240:CDS 15.0%
!!! TAATTTTCTAGAGAGAAAAA+AGG + chr7_1:40624576-40624595 None:intergenic 20.0%
!! TTTATCTTGTTCTATACAAA+TGG + chr7_1:40624828-40624847 None:intergenic 20.0%
!!! TTCATTTCTGGAATTATATA+TGG - chr7_1:40625167-40625186 Msa1019240:intron 20.0%
!! TTAGAGTTACTTAATTATAG+AGG + chr7_1:40625313-40625332 None:intergenic 20.0%
!! TGGAATTATAATCTAATCAA+AGG + chr7_1:40625391-40625410 None:intergenic 20.0%
!!! ATTCCAATAGTAAATTTTGT+TGG - chr7_1:40625405-40625424 Msa1019240:intron 20.0%
!!! ATTTAAGCTTTTGTTTTTGT+TGG - chr7_1:40625480-40625499 Msa1019240:CDS 20.0%
!!! TTTAAGCTTTTGTTTTTGTT+GGG - chr7_1:40625481-40625500 Msa1019240:CDS 20.0%
!! GAAATAAAAAAATAATCCAC+AGG + chr7_1:40625910-40625929 None:intergenic 20.0%
!!! TATTGTTTTTTATTCGATGT+TGG - chr7_1:40626022-40626041 Msa1019240:intron 20.0%
!! CTTAATAGTAAACTAAACAT+GGG + chr7_1:40626121-40626140 None:intergenic 20.0%
!!! CATGTTTAGTTTACTATTAA+GGG - chr7_1:40626120-40626139 Msa1019240:intron 20.0%
!!! ATGTTTAGTTTACTATTAAG+GGG - chr7_1:40626121-40626140 Msa1019240:intron 20.0%
!! TAGATTATTCATACAAAGAT+TGG + chr7_1:40626335-40626354 None:intergenic 20.0%
!! AAGAAATTACAGAAAAAGAA+GGG - chr7_1:40626782-40626801 Msa1019240:intron 20.0%
!!! ATTTTGTTTCTCTTAGATAT+TGG - chr7_1:40626851-40626870 Msa1019240:intron 20.0%
!! AAAGAAAACATAAACTTGAA+TGG + chr7_1:40626886-40626905 None:intergenic 20.0%
!!! ATTCAAGTTTATGTTTTCTT+TGG - chr7_1:40626885-40626904 Msa1019240:intron 20.0%
!!! TTATCTTTTTTAAGAGCATT+CGG + chr7_1:40627621-40627640 None:intergenic 20.0%
!! TGATTATATAGAGAGAAAAA+GGG + chr7_1:40630002-40630021 None:intergenic 20.0%
!! TTGATTATATAGAGAGAAAA+AGG + chr7_1:40630003-40630022 None:intergenic 20.0%
!! AAAATTCAAATAGAACAATG+TGG + chr7_1:40630036-40630055 None:intergenic 20.0%
!!! AATTAACTTGTTCAGTATTA+AGG - chr7_1:40630114-40630133 Msa1019240:intron 20.0%
!!! TTTTTATAAAGTACCTTTAC+CGG - chr7_1:40630467-40630486 Msa1019240:intron 20.0%
!! AAATTTCAAAAACAGATTAG+GGG + chr7_1:40630634-40630653 None:intergenic 20.0%
!! GAAATTTCAAAAACAGATTA+GGG + chr7_1:40630635-40630654 None:intergenic 20.0%
!! TGAAATTTCAAAAACAGATT+AGG + chr7_1:40630636-40630655 None:intergenic 20.0%
!! GAATATTGATCAAAATACAA+AGG - chr7_1:40625256-40625275 Msa1019240:intron 20.0%
!! TTAGTATTAATAATACTCAG+CGG + chr7_1:40630899-40630918 None:intergenic 20.0%
!!! CATCATACTAATTTGTTTAT+AGG + chr7_1:40630946-40630965 None:intergenic 20.0%
!!! AAATTTAAGATGTTTTTGTC+GGG - chr7_1:40631103-40631122 Msa1019240:CDS 20.0%
!! ACATAGGTTATTCATATAAA+GGG + chr7_1:40631724-40631743 None:intergenic 20.0%
!! AACATAGGTTATTCATATAA+AGG + chr7_1:40631725-40631744 None:intergenic 20.0%
!!! TATGTTTAGTTTACCATTAA+GGG - chr7_1:40631739-40631758 Msa1019240:intron 20.0%
!! AAGAAATTACAGAAAAAGAA+GGG - chr7_1:40626782-40626801 Msa1019240:intron 20.0%
!! AAAGAAAACATAAACTTGAA+TGG + chr7_1:40626886-40626905 None:intergenic 20.0%
!! AATTTGCATAAAACTAGTAA+AGG + chr7_1:40632456-40632475 None:intergenic 20.0%
!! AGTAATTAAAGAGCAAAATT+TGG + chr7_1:40632483-40632502 None:intergenic 20.0%
! AACGTGTATGAATTATTTGT+TGG - chr7_1:40624443-40624462 Msa1019240:three_prime_UTR 25.0%
! ATTAATGTCATTCAGTTTGA+AGG - chr7_1:40624713-40624732 Msa1019240:intron 25.0%
! ACAGTGGATAAATTCAAATA+AGG - chr7_1:40624999-40625018 Msa1019240:intron 25.0%
! AATTTGTACAAACAGATTAG+GGG + chr7_1:40625039-40625058 None:intergenic 25.0%
! GAATTTGTACAAACAGATTA+GGG + chr7_1:40625040-40625059 None:intergenic 25.0%
! TGAATTTGTACAAACAGATT+AGG + chr7_1:40625041-40625060 None:intergenic 25.0%
! TAATCTGTTTGTACAAATTC+AGG - chr7_1:40625040-40625059 Msa1019240:intron 25.0%
! CATATGTCATTATTCATTTC+TGG - chr7_1:40625155-40625174 Msa1019240:intron 25.0%
! TCATCTTACCTATAGATATT+GGG + chr7_1:40625285-40625304 None:intergenic 25.0%
! ATCATCTTACCTATAGATAT+TGG + chr7_1:40625286-40625305 None:intergenic 25.0%
! CATCCAACAAAATTTACTAT+TGG + chr7_1:40625411-40625430 None:intergenic 25.0%
!!! TTAAGCTTTTGTTTTTGTTG+GGG - chr7_1:40625482-40625501 Msa1019240:CDS 25.0%
!! ATTTTCCTGTTATATGTGTT+TGG - chr7_1:40625859-40625878 Msa1019240:intron 25.0%
!! TTTTCCTGTTATATGTGTTT+GGG - chr7_1:40625860-40625879 Msa1019240:intron 25.0%
! TGTATGATATATGCCTATAT+TGG - chr7_1:40625884-40625903 Msa1019240:intron 25.0%
! CCTTAATAGTAAACTAAACA+TGG + chr7_1:40626122-40626141 None:intergenic 25.0%
!! CCATGTTTAGTTTACTATTA+AGG - chr7_1:40626119-40626138 Msa1019240:intron 25.0%
! GAAGAAATTACAGAAAAAGA+AGG - chr7_1:40626781-40626800 Msa1019240:intron 25.0%
! TTCTCTTAGATATTGGTATT+TGG - chr7_1:40626858-40626877 Msa1019240:intron 25.0%
! TAATGTTTACAATTGTTAGC+TGG - chr7_1:40627000-40627019 Msa1019240:CDS 25.0%
! CAAAAATTGCATATAAGTGA+AGG + chr7_1:40627029-40627048 None:intergenic 25.0%
! TGTATCTGATACAATTGAAA+AGG + chr7_1:40627133-40627152 None:intergenic 25.0%
!!! TCATGTCATTTTAGATTGTA+AGG - chr7_1:40628150-40628169 Msa1019240:intron 25.0%
! TAAATTCGGGAAAGTTAATT+CGG + chr7_1:40628453-40628472 None:intergenic 25.0%
! TATAGTTATCGGGATAAATT+CGG + chr7_1:40628467-40628486 None:intergenic 25.0%
! TGCAGTGTAAATATAGTTAT+CGG + chr7_1:40628478-40628497 None:intergenic 25.0%
! AAACTGTTTCCTAGTTATAA+TGG + chr7_1:40628552-40628571 None:intergenic 25.0%
! TCAAAGTTGTTAATACATGA+TGG + chr7_1:40628750-40628769 None:intergenic 25.0%
!!! AATGAAATGTTTTAACGTAG+TGG - chr7_1:40628775-40628794 Msa1019240:intron 25.0%
!!! ATATGCTATAAGTTGTTTTC+AGG - chr7_1:40629094-40629113 Msa1019240:intron 25.0%
!!! TATGCTATAAGTTGTTTTCA+GGG - chr7_1:40629095-40629114 Msa1019240:intron 25.0%
!! AAGATTTATGAATTGATTCC+TGG - chr7_1:40629308-40629327 Msa1019240:intron 25.0%
!!! TTTTAGCTTTTGCTTGATTT+AGG - chr7_1:40629386-40629405 Msa1019240:intron 25.0%
!! TATTAAATAGAATGGGGTTT+TGG + chr7_1:40629554-40629573 None:intergenic 25.0%
! TAATAAGTAGTAGATCAACA+TGG - chr7_1:40629585-40629604 Msa1019240:intron 25.0%
! TATAAGTTGTGAATGCAATA+CGG - chr7_1:40629623-40629642 Msa1019240:intron 25.0%
! TATTTGCATGATAGATCAAA+TGG - chr7_1:40629725-40629744 Msa1019240:intron 25.0%
! AATGTGTATGAACTATTTGT+TGG - chr7_1:40629869-40629888 Msa1019240:intron 25.0%
! TGAGAACTTATGAAATTAAG+CGG - chr7_1:40630279-40630298 Msa1019240:intron 25.0%
!!! TTATGAAAAGTGTCAAAAGT+TGG - chr7_1:40630310-40630329 Msa1019240:CDS 25.0%
!! AGCTTATGAAGATACAATTT+TGG + chr7_1:40630445-40630464 None:intergenic 25.0%
!! CTTTTGTCATTATTCATTTC+TGG - chr7_1:40630722-40630741 Msa1019240:intron 25.0%
!!! TTCATTTCTGGAATTATATG+TGG - chr7_1:40630734-40630753 Msa1019240:intron 25.0%
! TATTGATCAAAATACAAAGG+AGG - chr7_1:40630815-40630834 Msa1019240:intron 25.0%
!!! TTTATAGGAACTTCTAAGAT+AGG + chr7_1:40630931-40630950 None:intergenic 25.0%
! AAATCCTAATCACATTTAAC+AGG + chr7_1:40630989-40631008 None:intergenic 25.0%
! CTTACAATTTCAACACAATA+TGG + chr7_1:40631619-40631638 None:intergenic 25.0%
! ATTGTGTTGAAATTGTAAGT+AGG - chr7_1:40631620-40631639 Msa1019240:intron 25.0%
! CTTAATGGTAAACTAAACAT+AGG + chr7_1:40631740-40631759 None:intergenic 25.0%
!! CTATGTTTAGTTTACCATTA+AGG - chr7_1:40631738-40631757 Msa1019240:intron 25.0%
!! ATGTTTAGTTTACCATTAAG+GGG - chr7_1:40631740-40631759 Msa1019240:intron 25.0%
!! TTTTTCTTGTGATTTCCAAT+AGG - chr7_1:40632217-40632236 Msa1019240:intron 25.0%
! GAAGAAATTACAGAAAAAGA+AGG - chr7_1:40626781-40626800 Msa1019240:intron 25.0%
! TACCAAATACCAATATCTAT+GGG + chr7_1:40632357-40632376 None:intergenic 25.0%
!! TTCTTTGGTTTAGTGTTAAT+TGG - chr7_1:40632427-40632446 Msa1019240:CDS 25.0%
TTGTATGAACAGGTATTTCT+AGG - chr7_1:40624482-40624501 Msa1019240:three_prime_UTR 30.0%
! TGTATGAACAGGTATTTCTA+GGG - chr7_1:40624483-40624502 Msa1019240:three_prime_UTR 30.0%
TTCGAAAAGAAAAACAAGCA+GGG + chr7_1:40624623-40624642 None:intergenic 30.0%
ATTCGAAAAGAAAAACAAGC+AGG + chr7_1:40624624-40624643 None:intergenic 30.0%
TAATAAAGACAAGCTAATCC+AGG + chr7_1:40625109-40625128 None:intergenic 30.0%
AAAGTCTTCCCAATATCTAT+AGG - chr7_1:40625274-40625293 Msa1019240:intron 30.0%
TATTCATATAAGAGTGGAAG+TGG + chr7_1:40626097-40626116 None:intergenic 30.0%
! ATGGGTTATTCATATAAGAG+TGG + chr7_1:40626103-40626122 None:intergenic 30.0%
TATGCCTATGTTTACCAATA+AGG - chr7_1:40626239-40626258 Msa1019240:intron 30.0%
ATGCCTATGTTTACCAATAA+GGG - chr7_1:40626240-40626259 Msa1019240:intron 30.0%
AATCATAACTTACCCCTTAT+TGG + chr7_1:40626256-40626275 None:intergenic 30.0%
! GGGTAAGTTATGATTTTTGT+TGG - chr7_1:40626261-40626280 Msa1019240:intron 30.0%
GGATATTCTGTGTTTCTTAA+AGG - chr7_1:40626282-40626301 Msa1019240:intron 30.0%
!!! ATGTTTTGATTTGAACATCC+AGG - chr7_1:40626459-40626478 Msa1019240:intron 30.0%
!! CTGAAAAATATTCTGAGACA+AGG + chr7_1:40626668-40626687 None:intergenic 30.0%
GTGAACACTAAAAACAAAGA+TGG + chr7_1:40626697-40626716 None:intergenic 30.0%
! TTTTCCTTGTGATTTCCAAT+AGG - chr7_1:40626723-40626742 Msa1019240:intron 30.0%
TTCTTTGGTTGAGTGTTAAT+TGG - chr7_1:40626900-40626919 Msa1019240:intron 30.0%
AGTTTGCATAAAACTAGTAC+AGG + chr7_1:40626929-40626948 None:intergenic 30.0%
! ATCCAAATTTTGCTCTTTAG+TGG - chr7_1:40626951-40626970 Msa1019240:intron 30.0%
AACCACTAAAGAGCAAAATT+TGG + chr7_1:40626956-40626975 None:intergenic 30.0%
TGTAAACATTAAACTCCAGT+AGG + chr7_1:40626991-40627010 None:intergenic 30.0%
TCACAAACTAGTACTTCATT+TGG - chr7_1:40627061-40627080 Msa1019240:intron 30.0%
! AACACCTTCAACAATTTTAC+TGG - chr7_1:40627092-40627111 Msa1019240:intron 30.0%
TATGCCAGTAAAATTGTTGA+AGG + chr7_1:40627099-40627118 None:intergenic 30.0%
!!! GTTTTTTACATGACAGAACA+AGG + chr7_1:40627157-40627176 None:intergenic 30.0%
CAAAATTGGATTTGATGAGT+TGG + chr7_1:40627276-40627295 None:intergenic 30.0%
CAAAATATAAGGTAGTTGAG+AGG - chr7_1:40627314-40627333 Msa1019240:intron 30.0%
TGGGAAAAATGTAACAGATT+AGG - chr7_1:40627348-40627367 Msa1019240:intron 30.0%
CATATCATCAAATGTACAAC+AGG - chr7_1:40627418-40627437 Msa1019240:intron 30.0%
!! GGCTTTATTGTCATATATAG+AGG + chr7_1:40627543-40627562 None:intergenic 30.0%
TCGAAGCAATATACATGAAT+TGG - chr7_1:40627586-40627605 Msa1019240:intron 30.0%
ACAAAGTTGAACAGAATATG+TGG + chr7_1:40627692-40627711 None:intergenic 30.0%
ACATATTCTGTTCAACTTTG+TGG - chr7_1:40627691-40627710 Msa1019240:intron 30.0%
!!! TGCATTTTAAAGTCAGTATC+CGG + chr7_1:40627878-40627897 None:intergenic 30.0%
CTTTGATAGGAAAATTGTAG+TGG - chr7_1:40628117-40628136 Msa1019240:intron 30.0%
ATAGTTATCGGGATAAATTC+GGG + chr7_1:40628466-40628485 None:intergenic 30.0%
GCAGTGTAAATATAGTTATC+GGG + chr7_1:40628477-40628496 None:intergenic 30.0%
TGAATAAAAGGCTGAATTAC+TGG + chr7_1:40628523-40628542 None:intergenic 30.0%
! AATTCAGCCTTTTATTCAGT+TGG - chr7_1:40628525-40628544 Msa1019240:intron 30.0%
TAATGGTCCAACTGAATAAA+AGG + chr7_1:40628535-40628554 None:intergenic 30.0%
! TTAACGTAGTGGAGAATATT+TGG - chr7_1:40628786-40628805 Msa1019240:intron 30.0%
! TAACGTAGTGGAGAATATTT+GGG - chr7_1:40628787-40628806 Msa1019240:intron 30.0%
CTAAAGTAAGATTTGAACCT+TGG - chr7_1:40628818-40628837 Msa1019240:intron 30.0%
!!! GTTTCAAGAGATGTCTTTTT+TGG + chr7_1:40628926-40628945 None:intergenic 30.0%
! TTATCTAAAACCCATGGTTA+TGG - chr7_1:40629152-40629171 Msa1019240:intron 30.0%
! TATCTAAAACCCATGGTTAT+GGG - chr7_1:40629153-40629172 Msa1019240:intron 30.0%
CCTAATCACATATATCAAAC+GGG + chr7_1:40629206-40629225 None:intergenic 30.0%
CCCTAATCACATATATCAAA+CGG + chr7_1:40629207-40629226 None:intergenic 30.0%
CCGTTTGATATATGTGATTA+GGG - chr7_1:40629204-40629223 Msa1019240:intron 30.0%
TCTATGTCATCTATTGTGTA+TGG - chr7_1:40629343-40629362 Msa1019240:intron 30.0%
TGCTTGATTTAGGCTATATT+AGG - chr7_1:40629396-40629415 Msa1019240:intron 30.0%
TTTAAATTCATCACTGTCGT+TGG - chr7_1:40629422-40629441 Msa1019240:intron 30.0%
TGCAAATAGTGGTTGAAATA+GGG + chr7_1:40629713-40629732 None:intergenic 30.0%
ATGCAAATAGTGGTTGAAAT+AGG + chr7_1:40629714-40629733 None:intergenic 30.0%
TTGATCTATCATGCAAATAG+TGG + chr7_1:40629724-40629743 None:intergenic 30.0%
!!! CATGTGATTGTTTTTTGAAC+AGG - chr7_1:40629898-40629917 Msa1019240:intron 30.0%
GCACTTAATTATTCAAATGC+TGG - chr7_1:40630056-40630075 Msa1019240:intron 30.0%
AAAAGCTGTTTAACCAAACA+GGG + chr7_1:40630140-40630159 None:intergenic 30.0%
AAAAAGCTGTTTAACCAAAC+AGG + chr7_1:40630141-40630160 None:intergenic 30.0%
! TGGTTTTCATAAGTTCATCT+AGG - chr7_1:40630330-40630349 Msa1019240:CDS 30.0%
! GGTTTTCATAAGTTCATCTA+GGG - chr7_1:40630331-40630350 Msa1019240:CDS 30.0%
AAAAACTAGCCAATCCAAAT+GGG + chr7_1:40630357-40630376 None:intergenic 30.0%
TATAATTCATAAGCCGGTAA+AGG + chr7_1:40630483-40630502 None:intergenic 30.0%
TGTGTGTATAATTCATAAGC+CGG + chr7_1:40630489-40630508 None:intergenic 30.0%
! ATATTTTGCAAGACTGTCTA+GGG + chr7_1:40630572-40630591 None:intergenic 30.0%
! TATATTTTGCAAGACTGTCT+AGG + chr7_1:40630573-40630592 None:intergenic 30.0%
TCAAATAATCCAATCCAAAC+AGG - chr7_1:40630608-40630627 Msa1019240:intron 30.0%
TCACATTTAACAGGAAAGAA+CGG + chr7_1:40630980-40630999 None:intergenic 30.0%
CTTTCCTGTTAAATGTGATT+AGG - chr7_1:40630982-40631001 Msa1019240:intron 30.0%
CCAATAAAAAACAATAAGCC+TGG + chr7_1:40631648-40631667 None:intergenic 30.0%
!!! CCAGGCTTATTGTTTTTTAT+TGG - chr7_1:40631645-40631664 Msa1019240:intron 30.0%
TAGGTTATTCATATAAAGGG+TGG + chr7_1:40631721-40631740 None:intergenic 30.0%
! TAACTTAAAGTACCCCTTAA+TGG + chr7_1:40631755-40631774 None:intergenic 30.0%
! ATTACGAACTTTTGACAACA+TGG + chr7_1:40631818-40631837 None:intergenic 30.0%
! TGATAACAAAGTACCCTTAA+TGG + chr7_1:40631872-40631891 None:intergenic 30.0%
!!! ATGTTTTGATTTGAACATCC+AGG - chr7_1:40626459-40626478 Msa1019240:intron 30.0%
AAACAAAGATGGAGTTTAAG+CGG + chr7_1:40632180-40632199 None:intergenic 30.0%
GTGAACACTAAAAACAAAGA+TGG + chr7_1:40626697-40626716 None:intergenic 30.0%
CATTTGTATCCCATAGATAT+TGG - chr7_1:40632345-40632364 Msa1019240:intron 30.0%
ATCCCATAGATATTGGTATT+TGG - chr7_1:40632352-40632371 Msa1019240:intron 30.0%
GTACCAAATACCAATATCTA+TGG + chr7_1:40626864-40626883 None:intergenic 30.0%
! AATGTTTTGCAACTGTTAGT+TGG - chr7_1:40632509-40632528 Msa1019240:intron 30.0%
TTTGCATATAAGACTAGTGA+AGG + chr7_1:40632538-40632557 None:intergenic 30.0%
TTCACCTTCATCTCTGTTAT+TGG - chr7_1:40624388-40624407 Msa1019240:three_prime_UTR 35.0%
AGATCCAATAACAGAGATGA+AGG + chr7_1:40624395-40624414 None:intergenic 35.0%
!! CATGTGTTTGTTGTATGAAC+AGG - chr7_1:40624472-40624491 Msa1019240:three_prime_UTR 35.0%
TCGAAAAGAAAAACAAGCAG+GGG + chr7_1:40624622-40624641 None:intergenic 35.0%
!! AGCTGTTTTCATAAGTTCTC+TGG - chr7_1:40624956-40624975 Msa1019240:intron 35.0%
CTAATTCTCATTGTTCTTCC+TGG - chr7_1:40625088-40625107 Msa1019240:intron 35.0%
!! TGTTTTTGTTGGGGTTGTAT+AGG - chr7_1:40625491-40625510 Msa1019240:CDS 35.0%
ACAACCCAAACACATATAAC+AGG + chr7_1:40625867-40625886 None:intergenic 35.0%
AATAATCCACAGGCCAATAT+AGG + chr7_1:40625900-40625919 None:intergenic 35.0%
AAACATAGGCATATGAAGAG+TGG + chr7_1:40626232-40626251 None:intergenic 35.0%
TGCCTATGTTTACCAATAAG+GGG - chr7_1:40626241-40626260 Msa1019240:intron 35.0%
TACCCCTTATTGGTAAACAT+AGG + chr7_1:40626246-40626265 None:intergenic 35.0%
! GGTACTTTGTCATCATTTTG+TGG - chr7_1:40626369-40626388 Msa1019240:intron 35.0%
!!! TTTTGATTTGAACATCCAGG+AGG - chr7_1:40626462-40626481 Msa1019240:intron 35.0%
TGTACCTATTGGAAATCACA+AGG + chr7_1:40626730-40626749 None:intergenic 35.0%
TCCAATAGGTACATTCTTGA+AGG - chr7_1:40626737-40626756 Msa1019240:intron 35.0%
ACCTTCAAGAATGTACCTAT+TGG + chr7_1:40626741-40626760 None:intergenic 35.0%
TAGGTACATTCTTGAAGGTA+AGG - chr7_1:40626742-40626761 Msa1019240:intron 35.0%
CAAACTAGTACTTCATTTGG+TGG - chr7_1:40627064-40627083 Msa1019240:intron 35.0%
TTGAGAGGAACTGAAAAACT+GGG - chr7_1:40627329-40627348 Msa1019240:intron 35.0%
TCATGTATATTGCTTCGATG+AGG + chr7_1:40627584-40627603 None:intergenic 35.0%
AAGATAAAGACTTGTGCTAG+TGG - chr7_1:40627634-40627653 Msa1019240:intron 35.0%
AGATAAAGACTTGTGCTAGT+GGG - chr7_1:40627635-40627654 Msa1019240:intron 35.0%
GTTCATCTGTGACTTCAATT+CGG - chr7_1:40627793-40627812 Msa1019240:intron 35.0%
!! TTGTTGATTTCTCTTCGGAT+TGG + chr7_1:40627819-40627838 None:intergenic 35.0%
!! GCTACTTGTTGATTTCTCTT+CGG + chr7_1:40627824-40627843 None:intergenic 35.0%
!! GGATACTGACTTTAAAATGC+AGG - chr7_1:40627877-40627896 Msa1019240:intron 35.0%
!! CTTTAAAATGCAGGTTGATG+CGG - chr7_1:40627886-40627905 Msa1019240:intron 35.0%
!! TTTAAAATGCAGGTTGATGC+GGG - chr7_1:40627887-40627906 Msa1019240:intron 35.0%
! TGTGTTGTTCAAAACCAAGA+TGG - chr7_1:40627941-40627960 Msa1019240:intron 35.0%
ACATAATTGTCTCACCATCT+TGG + chr7_1:40627958-40627977 None:intergenic 35.0%
CGAAGAAGTCATGTTAATGA+AGG - chr7_1:40628230-40628249 Msa1019240:intron 35.0%
TCATGTTAATGAAGGAAGAG+TGG - chr7_1:40628238-40628257 Msa1019240:intron 35.0%
TAGTCATCATGTACACTACT+TGG - chr7_1:40628389-40628408 Msa1019240:intron 35.0%
TCAGTTGGACCATTATAACT+AGG - chr7_1:40628540-40628559 Msa1019240:intron 35.0%
TAACTAAAGATGTGCAGTGA+TGG + chr7_1:40628704-40628723 None:intergenic 35.0%
!! TAAGTTGTTTTCAGGGTATG+AGG - chr7_1:40629102-40629121 Msa1019240:intron 35.0%
!! AAGTTGTTTTCAGGGTATGA+GGG - chr7_1:40629103-40629122 Msa1019240:intron 35.0%
! GAGCAATTATCTAAAACCCA+TGG - chr7_1:40629146-40629165 Msa1019240:intron 35.0%
ATCAAACGGGTCAACAAATT+GGG + chr7_1:40629193-40629212 None:intergenic 35.0%
TATCAAACGGGTCAACAAAT+TGG + chr7_1:40629194-40629213 None:intergenic 35.0%
CCCGTTTGATATATGTGATT+AGG - chr7_1:40629203-40629222 Msa1019240:intron 35.0%
CATAGACATATGCAAAAACC+AGG + chr7_1:40629329-40629348 None:intergenic 35.0%
ATCAACATGGTTTATGAAGC+TGG - chr7_1:40629598-40629617 Msa1019240:intron 35.0%
ACACAAACGTTGTGACAATT+TGG - chr7_1:40629664-40629683 Msa1019240:intron 35.0%
! TCTTCATCTCTCTCTGTTTT+TGG - chr7_1:40629819-40629838 Msa1019240:intron 35.0%
CAAAAACTAGCCAATCCAAA+TGG + chr7_1:40630358-40630377 None:intergenic 35.0%
AACTCAAAAATAAGCCAAGC+CGG - chr7_1:40630541-40630560 Msa1019240:intron 35.0%
! TATTTTGCAAGACTGTCTAG+GGG + chr7_1:40630571-40630590 None:intergenic 35.0%
AGATTTATCATCTTCCCTCT+AGG + chr7_1:40630845-40630864 None:intergenic 35.0%
!! TGTTTTTGTCGGGTTTGTAT+AGG - chr7_1:40631113-40631132 Msa1019240:CDS 35.0%
ATATATGCCTTCAGGTATAG+TGG - chr7_1:40631514-40631533 Msa1019240:intron 35.0%
AAAGTAAGAAAACCATCCAC+AGG + chr7_1:40631540-40631559 None:intergenic 35.0%
!!! TTTTGATTTGAACATCCAGG+AGG - chr7_1:40626462-40626481 Msa1019240:intron 35.0%
TCCAATAGGTACATTCTTGA+AGG - chr7_1:40626737-40626756 Msa1019240:intron 35.0%
ACCTTCAAGAATGTACCTAT+TGG + chr7_1:40626741-40626760 None:intergenic 35.0%
TAGGTACATTCTTGAAGGTA+AGG - chr7_1:40626742-40626761 Msa1019240:intron 35.0%
! CTACTACTGCTTTGATGTTT+TGG - chr7_1:40632591-40632610 Msa1019240:five_prime_UTR 35.0%
!!! GATGTTTTGGAATTGTTAGC+TGG - chr7_1:40632604-40632623 Msa1019240:five_prime_UTR 35.0%
AAGGTGAATCATACCCATCT+TGG + chr7_1:40624376-40624395 None:intergenic 40.0%
CAGGGGCTGATAATTGAAAA+TGG + chr7_1:40624605-40624624 None:intergenic 40.0%
TTCAGTTTGAAGGCTCTGTT+TGG - chr7_1:40624723-40624742 Msa1019240:intron 40.0%
TGTTCAAATGCTGTCTGTCT+TGG - chr7_1:40624884-40624903 Msa1019240:CDS 40.0%
!!! GCCACTCTCAATTAGTTTTC+TGG - chr7_1:40625132-40625151 Msa1019240:intron 40.0%
GCCAGAAAACTAATTGAGAG+TGG + chr7_1:40625136-40625155 None:intergenic 40.0%
! AATCAAAGGAGCATAGAGAC+AGG + chr7_1:40625377-40625396 None:intergenic 40.0%
TTAGAGGTGGCAATGTGAAA+TGG - chr7_1:40625581-40625600 Msa1019240:CDS 40.0%
GAAATGGAGAGCTCTTAGAT+TGG - chr7_1:40625597-40625616 Msa1019240:intron 40.0%
TGGACACTGGAAATTTCTCT+TGG - chr7_1:40625617-40625636 Msa1019240:CDS 40.0%
GGACACTGGAAATTTCTCTT+GGG - chr7_1:40625618-40625637 Msa1019240:CDS 40.0%
GACACTGGAAATTTCTCTTG+GGG - chr7_1:40625619-40625638 Msa1019240:CDS 40.0%
AAATTTCTCTTGGGGTAGTG+AGG - chr7_1:40625627-40625646 Msa1019240:CDS 40.0%
ACGAACAAGCTCATTGTTTG+AGG + chr7_1:40625695-40625714 None:intergenic 40.0%
TGAAGATACCACTGCTTGAA+TGG + chr7_1:40625763-40625782 None:intergenic 40.0%
AAAGAAAACAGCAGCCAAGA+AGG - chr7_1:40625810-40625829 Msa1019240:intron 40.0%
! TATATGCCTATATTGGCCTG+TGG - chr7_1:40625891-40625910 Msa1019240:intron 40.0%
! ATCGTGTCGATATTGTACGT+AGG - chr7_1:40625990-40626009 Msa1019240:intron 40.0%
CTGTGTCTACTGTCTACTTA+TGG - chr7_1:40626179-40626198 Msa1019240:intron 40.0%
GTTCATGTTACTCTACCTAC+TGG - chr7_1:40626973-40626992 Msa1019240:CDS 40.0%
! AATTTTACTGGCATAGCCAG+TGG - chr7_1:40627104-40627123 Msa1019240:intron 40.0%
ACAATTGAAAAGGTTGCCAC+TGG + chr7_1:40627123-40627142 None:intergenic 40.0%
GTTGAGAGGAACTGAAAAAC+TGG - chr7_1:40627328-40627347 Msa1019240:intron 40.0%
TATATTGCTTCGATGAGGCT+AGG + chr7_1:40627579-40627598 None:intergenic 40.0%
TCAACATGCAAAGACCCTTA+TGG - chr7_1:40627664-40627683 Msa1019240:intron 40.0%
CAGAATATGTGGCTCCATAA+GGG + chr7_1:40627681-40627700 None:intergenic 40.0%
ACAGAATATGTGGCTCCATA+AGG + chr7_1:40627682-40627701 None:intergenic 40.0%
GTTCAACTTTGTGGAATGTG+TGG - chr7_1:40627700-40627719 Msa1019240:intron 40.0%
!! AGAAGCTTTGGGAGTTTGTT+GGG - chr7_1:40628021-40628040 Msa1019240:intron 40.0%
CAGTTGCTCAATGCTTTGAT+AGG - chr7_1:40628104-40628123 Msa1019240:intron 40.0%
ACATCAAGAAGTCGAAGTCA+TGG - chr7_1:40628293-40628312 Msa1019240:intron 40.0%
AGGCTGAATTACTGGAATTC+CGG + chr7_1:40628515-40628534 None:intergenic 40.0%
AACTAGGAAACAGTTTCGTG+AGG - chr7_1:40628556-40628575 Msa1019240:intron 40.0%
ACTAGGAAACAGTTTCGTGA+GGG - chr7_1:40628557-40628576 Msa1019240:intron 40.0%
TCGCGAAAGAAATTATCACG+AGG + chr7_1:40628583-40628602 None:intergenic 40.0%
ACACACAAGTGATAGAACCA+AGG + chr7_1:40628838-40628857 None:intergenic 40.0%
CAGATAAAGCCCATAACCAT+GGG + chr7_1:40629165-40629184 None:intergenic 40.0%
! TCGTTGGATTTCAAGTGTCT+GGG - chr7_1:40629438-40629457 Msa1019240:intron 40.0%
!! AGAGAAGCAAGTTGATGCTA+TGG - chr7_1:40629518-40629537 Msa1019240:intron 40.0%
!! GAGAAGCAAGTTGATGCTAT+GGG - chr7_1:40629519-40629538 Msa1019240:intron 40.0%
!! AGAAGCAAGTTGATGCTATG+GGG - chr7_1:40629520-40629539 Msa1019240:intron 40.0%
AACGTTGTGACAATTTGGTC+TGG - chr7_1:40629669-40629688 Msa1019240:intron 40.0%
ACAATTTGGTCTGGCCTAAT+GGG - chr7_1:40629678-40629697 Msa1019240:intron 40.0%
CAAGAGATTCTATGCACAAG+AGG - chr7_1:40629926-40629945 Msa1019240:intron 40.0%
TTCAGTATTAAGGCCCTGTT+TGG - chr7_1:40630124-40630143 Msa1019240:intron 40.0%
GAACTAATTCAGCTCATCCA+GGG + chr7_1:40630697-40630716 None:intergenic 40.0%
AGAACTAATTCAGCTCATCC+AGG + chr7_1:40630698-40630717 None:intergenic 40.0%
! GATGAGCTGAATTAGTTCTC+TGG - chr7_1:40630699-40630718 Msa1019240:intron 40.0%
! TACAAAGGAGGTATACCTAG+AGG - chr7_1:40630827-40630846 Msa1019240:intron 40.0%
! ACAAAGGAGGTATACCTAGA+GGG - chr7_1:40630828-40630847 Msa1019240:intron 40.0%
TATCATCACCAAAAGCGAGT+CGG + chr7_1:40631061-40631080 None:intergenic 40.0%
TTAGAGGTGGCAATGTGAAA+TGG - chr7_1:40625581-40625600 Msa1019240:CDS 40.0%
GAAATGGAGAGCTCTTAGAT+TGG - chr7_1:40625597-40625616 Msa1019240:intron 40.0%
ACGAACAAGCTCATTGTTTG+AGG + chr7_1:40625695-40625714 None:intergenic 40.0%
TGAAGATACCACTGCTTGAA+TGG + chr7_1:40625763-40625782 None:intergenic 40.0%
AAAGAAAACAGCAGCCAAGA+AGG - chr7_1:40625810-40625829 Msa1019240:intron 40.0%
GCTGTATGATATATGCCTTC+AGG - chr7_1:40631506-40631525 Msa1019240:intron 40.0%
TGAAATTGTAAGTAGGTGCC+AGG - chr7_1:40631627-40631646 Msa1019240:intron 40.0%
! AGGGTACTTTGTTATCACTG+TGG - chr7_1:40631875-40631894 Msa1019240:intron 40.0%
CATTCTTGAAGGTAAGGAGT+TGG - chr7_1:40632242-40632261 Msa1019240:intron 40.0%
ACACAGAATCAGCAGAGAGA+CGG - chr7_1:40624315-40624334 Msa1019240:three_prime_UTR 45.0%
GTGAATCATACCCATCTTGG+CGG + chr7_1:40624373-40624392 None:intergenic 45.0%
GTCTCACAAACTCATGACAG+TGG - chr7_1:40624983-40625002 Msa1019240:intron 45.0%
CAAATAAGGCAAGTCCACAC+AGG - chr7_1:40625013-40625032 Msa1019240:intron 45.0%
CTAGACAGCTTAGTGTTTGC+TGG + chr7_1:40625535-40625554 None:intergenic 45.0%
TGTCTAGCAACAAGACAGTC+AGG - chr7_1:40625548-40625567 Msa1019240:CDS 45.0%
TCACATTGCCACCTCTAACA+CGG + chr7_1:40625579-40625598 None:intergenic 45.0%
AGAGCTCTTAGATTGGACAC+TGG - chr7_1:40625604-40625623 Msa1019240:intron 45.0%
AGCAGCATCAACTTGGACAA+TGG + chr7_1:40625740-40625759 None:intergenic 45.0%
TGAATGGAGCAGCATCAACT+TGG + chr7_1:40625747-40625766 None:intergenic 45.0%
CAGTGGTATCTTCAGCACTA+CGG - chr7_1:40625769-40625788 Msa1019240:CDS 45.0%
! ACTACGGTGTTGAAGTTGGT+AGG - chr7_1:40625785-40625804 Msa1019240:CDS 45.0%
CGATATTGTACGTAGGTGCT+AGG - chr7_1:40625997-40626016 Msa1019240:intron 45.0%
ACTACTACACAGCAGAATGC+AGG + chr7_1:40626405-40626424 None:intergenic 45.0%
TTGAGCAGCGTCAGAAAGAT+AGG - chr7_1:40626536-40626555 Msa1019240:intron 45.0%
TCCCACATTGAAGAGCAGTT+CGG - chr7_1:40626568-40626587 Msa1019240:intron 45.0%
ACCGAACTGCTCTTCAATGT+GGG + chr7_1:40626572-40626591 None:intergenic 45.0%
CATTCTTGAAGGTAAGGAGC+TGG - chr7_1:40626748-40626767 Msa1019240:intron 45.0%
CTTGATACACACTACGATGC+AGG - chr7_1:40627176-40627195 Msa1019240:intron 45.0%
CTTCCTTGGAAATCTGATCG+GGG + chr7_1:40627766-40627785 None:intergenic 45.0%
GCTTCCTTGGAAATCTGATC+GGG + chr7_1:40627767-40627786 None:intergenic 45.0%
GGCTTCCTTGGAAATCTGAT+CGG + chr7_1:40627768-40627787 None:intergenic 45.0%
GAAGTCACAGATGAACTTCG+TGG + chr7_1:40627789-40627808 None:intergenic 45.0%
AACAAGTAGCTCCAGTTCAG+CGG - chr7_1:40627834-40627853 Msa1019240:intron 45.0%
TCAGTATCCGGTGTATTGTC+TGG + chr7_1:40627866-40627885 None:intergenic 45.0%
! CATCAGTATTGAACCGTTGC+TGG - chr7_1:40627997-40628016 Msa1019240:intron 45.0%
!! CAGAAGCTTTGGGAGTTTGT+TGG - chr7_1:40628020-40628039 Msa1019240:intron 45.0%
!! GAAGCTTTGGGAGTTTGTTG+GGG - chr7_1:40628022-40628041 Msa1019240:intron 45.0%
!! AAGCTTTGGGAGTTTGTTGG+GGG - chr7_1:40628023-40628042 Msa1019240:intron 45.0%
AATTGGCAGTGGCAAAACAG+TGG - chr7_1:40628050-40628069 Msa1019240:intron 45.0%
CTGAATTACTGGAATTCCGG+TGG + chr7_1:40628512-40628531 None:intergenic 45.0%
GCAGATAAAGCCCATAACCA+TGG + chr7_1:40629166-40629185 None:intergenic 45.0%
ATCGCACAACACAGAAGAAG+CGG - chr7_1:40629231-40629250 Msa1019240:intron 45.0%
! GTCGTTGGATTTCAAGTGTC+TGG - chr7_1:40629437-40629456 Msa1019240:intron 45.0%
!! AAGTTGATGCTATGGGGCTT+AGG - chr7_1:40629526-40629545 Msa1019240:intron 45.0%
GACAATTTGGTCTGGCCTAA+TGG - chr7_1:40629677-40629696 Msa1019240:intron 45.0%
! AAGTTCATCTAGGGCCCATT+TGG - chr7_1:40630340-40630359 Msa1019240:CDS 45.0%
AAACAGATTAGGGGCCTGTT+TGG + chr7_1:40630625-40630644 None:intergenic 45.0%
GGTTTGTATAGGTACGAGCT+TGG - chr7_1:40631124-40631143 Msa1019240:CDS 45.0%
GTTGCTAGACAGCTTAGTGT+TGG + chr7_1:40625539-40625558 None:intergenic 45.0%
TGTCTAGCAACAAGACAGTC+AGG - chr7_1:40625548-40625567 Msa1019240:CDS 45.0%
TCACATTGCCACCTCTAACA+CGG + chr7_1:40625579-40625598 None:intergenic 45.0%
AGAGCTCTTAGATTGGACAC+TGG - chr7_1:40625604-40625623 Msa1019240:intron 45.0%
TGGACACTGGAAATTTCTCG+TGG - chr7_1:40631239-40631258 Msa1019240:CDS 45.0%
GGACACTGGAAATTTCTCGT+GGG - chr7_1:40631240-40631259 Msa1019240:CDS 45.0%
GACACTGGAAATTTCTCGTG+GGG - chr7_1:40631241-40631260 Msa1019240:CDS 45.0%
AAATTTCTCGTGGGGTAGTG+AGG - chr7_1:40631249-40631268 Msa1019240:CDS 45.0%
CAAGACTCGTCTTCTTGATG+TGG - chr7_1:40631282-40631301 Msa1019240:CDS 45.0%
TGCAGCATCAACTTGGACAA+TGG + chr7_1:40631362-40631381 None:intergenic 45.0%
TGAATGGTGCAGCATCAACT+TGG + chr7_1:40631369-40631388 None:intergenic 45.0%
CAGTGGTATCTTCAGCACTA+CGG - chr7_1:40625769-40625788 Msa1019240:CDS 45.0%
TACCTCTGCAGAATCCTTCT+TGG + chr7_1:40631449-40631468 None:intergenic 45.0%
TTGAGCAGCGTCAGAAAGAT+AGG - chr7_1:40626536-40626555 Msa1019240:intron 45.0%
TCCCACATTGAAGAGCAGTT+CGG - chr7_1:40626568-40626587 Msa1019240:intron 45.0%
ATGGAGTTTAAGCGGAGACA+AGG + chr7_1:40632172-40632191 None:intergenic 45.0%
!!! ATTAAAATTTCAATTTTTTT+TGG - chr7_1:40631030-40631049 Msa1019240:intron 5.0%
!! TTAAATTTAAATAATTAACT+AGG + chr7_1:40631091-40631110 None:intergenic 5.0%
CTAGGGATTCCATGCACAAG+AGG - chr7_1:40624500-40624519 Msa1019240:intron 50.0%
AAACAGATTAGGGGCCTGTG+TGG + chr7_1:40625030-40625049 None:intergenic 50.0%
GGGTTGTATAGGTACGAGCT+TGG - chr7_1:40625502-40625521 Msa1019240:CDS 50.0%
! ACAGCTTAGTGTTTGCTGGC+TGG + chr7_1:40625531-40625550 None:intergenic 50.0%
CTAGCAACAAGACAGTCAGG+AGG - chr7_1:40625551-40625570 Msa1019240:CDS 50.0%
CAAGACTCGTCTTCTCGATG+TGG - chr7_1:40625660-40625679 Msa1019240:CDS 50.0%
GCTTGTTCGTACTCAGACTC+TGG - chr7_1:40625705-40625724 Msa1019240:CDS 50.0%
ATGCTGCTCCATTCAAGCAG+TGG - chr7_1:40625752-40625771 Msa1019240:CDS 50.0%
! CAGCACTACGGTGTTGAAGT+TGG - chr7_1:40625781-40625800 Msa1019240:CDS 50.0%
AGCCAAGAAGGATTCTGCAG+AGG - chr7_1:40625822-40625841 Msa1019240:intron 50.0%
CACCTCTGCAGAATCCTTCT+TGG + chr7_1:40625827-40625846 None:intergenic 50.0%
! GCTCAAGTTTTCTCTGCACG+TGG + chr7_1:40626522-40626541 None:intergenic 50.0%
CACCGAACTGCTCTTCAATG+TGG + chr7_1:40626573-40626592 None:intergenic 50.0%
CACATTGAAGAGCAGTTCGG+TGG - chr7_1:40626571-40626590 Msa1019240:intron 50.0%
! ATTGAAGAGCAGTTCGGTGG+TGG - chr7_1:40626574-40626593 Msa1019240:intron 50.0%
CGATGAGGCTAGGATGATGT+CGG + chr7_1:40627569-40627588 None:intergenic 50.0%
CAACCCCGATCAGATTTCCA+AGG - chr7_1:40627760-40627779 Msa1019240:intron 50.0%
GATGAACTTCGTGGCTTCCT+TGG + chr7_1:40627780-40627799 None:intergenic 50.0%
GCTGGAACCAGACAATACAC+CGG - chr7_1:40627856-40627875 Msa1019240:intron 50.0%
TCAGCGATGACGTGACATGT+TGG - chr7_1:40627915-40627934 Msa1019240:intron 50.0%
CAGCGATGACGTGACATGTT+GGG - chr7_1:40627916-40627935 Msa1019240:intron 50.0%
AGCGATGACGTGACATGTTG+GGG - chr7_1:40627917-40627936 Msa1019240:intron 50.0%
!! AGTTTGTTGGGGGCTGCAAT+TGG - chr7_1:40628033-40628052 Msa1019240:intron 50.0%
AGTGGCAAAACAGTGGAGGA+AGG - chr7_1:40628057-40628076 Msa1019240:intron 50.0%
CTGCATAGCATCATTGCCAC+CGG - chr7_1:40628493-40628512 Msa1019240:intron 50.0%
AACACAGAAGAAGCGGAGAG+AGG - chr7_1:40629238-40629257 Msa1019240:intron 50.0%
ACACAGAAGAAGCGGAGAGA+GGG - chr7_1:40629239-40629258 Msa1019240:intron 50.0%
TCTGGCCTAATGGGAGCTTA+TGG - chr7_1:40629687-40629706 Msa1019240:intron 50.0%
TAGGGCCATAAGCTCCCATT+AGG + chr7_1:40629695-40629714 None:intergenic 50.0%
! CATCTAGGGCCCATTTGGAT+TGG - chr7_1:40630345-40630364 Msa1019240:CDS 50.0%
GATTAGGGGCCTGTTTGGAT+TGG + chr7_1:40630620-40630639 None:intergenic 50.0%
CTTATTCTCACTGTGCTCCC+TGG - chr7_1:40630677-40630696 Msa1019240:intron 50.0%
!! CTAGACAGCTTAGTGTTGGC+TGG + chr7_1:40631157-40631176 None:intergenic 50.0%
GTCAGGAGAATCCGTGTTAG+AGG - chr7_1:40631187-40631206 Msa1019240:CDS 50.0%
AGGAGAATCCGTGTTAGAGG+TGG - chr7_1:40631190-40631209 Msa1019240:CDS 50.0%
GCTTGTTCGTACTCAGACTC+TGG - chr7_1:40625705-40625724 Msa1019240:CDS 50.0%
ATGCTGCACCATTCAAGCAG+TGG - chr7_1:40631374-40631393 Msa1019240:CDS 50.0%
! ACTACGGCGTTGAAGTTGGT+AGG - chr7_1:40631407-40631426 Msa1019240:CDS 50.0%
AGCCAAGAAGGATTCTGCAG+AGG - chr7_1:40625822-40625841 Msa1019240:intron 50.0%
! GCTCAAGTTTTCTCTGCACG+TGG + chr7_1:40626522-40626541 None:intergenic 50.0%
GCCGAACTGCTCTTCAATGT+GGG + chr7_1:40632076-40632095 None:intergenic 50.0%
CACATTGAAGAGCAGTTCGG+CGG - chr7_1:40626571-40626590 Msa1019240:intron 50.0%
GAATCAGCAGAGAGACGGAG+AGG - chr7_1:40624320-40624339 Msa1019240:three_prime_UTR 55.0%
CAGAGAGACGGAGAGGAAGA+GGG - chr7_1:40624327-40624346 Msa1019240:three_prime_UTR 55.0%
AGACGGAGAGGAAGAGGGTT+AGG - chr7_1:40624332-40624351 Msa1019240:three_prime_UTR 55.0%
AGAGCAAGCTCCGCCAAGAT+GGG - chr7_1:40624360-40624379 Msa1019240:three_prime_UTR 55.0%
GCTCTTCTTCTTGCCACCAG+TGG + chr7_1:40624530-40624549 None:intergenic 55.0%
CTGGTGGCAAGAAGAAGAGC+TGG - chr7_1:40624530-40624549 Msa1019240:intron 55.0%
GTCAGGAGGATCCGTGTTAG+AGG - chr7_1:40625565-40625584 Msa1019240:CDS 55.0%
AGGAGGATCCGTGTTAGAGG+TGG - chr7_1:40625568-40625587 Msa1019240:CDS 55.0%
CAGCAACAACTTCAGCCTCC+TGG + chr7_1:40626480-40626499 None:intergenic 55.0%
ACCAGGGCGAGATGAAATGC+AGG + chr7_1:40626611-40626630 None:intergenic 55.0%
TCATCTCGCCCTGGTCAATG+TGG - chr7_1:40626616-40626635 Msa1019240:intron 55.0%
GTCAATGTGGCAGGGCTGAT+GGG - chr7_1:40626629-40626648 Msa1019240:intron 55.0%
AGGCTAGGATGATGTCGGTG+AGG + chr7_1:40627564-40627583 None:intergenic 55.0%
ACCGTTGCTGGCAGAAGCTT+TGG - chr7_1:40628009-40628028 Msa1019240:intron 55.0%
CCCAAAGCTTCTGCCAGCAA+CGG + chr7_1:40628013-40628032 None:intergenic 55.0%
CCGTTGCTGGCAGAAGCTTT+GGG - chr7_1:40628010-40628029 Msa1019240:intron 55.0%
TGGCAGTGGCAAAACAGTGG+AGG - chr7_1:40628053-40628072 Msa1019240:intron 55.0%
GCTCTTCTTCTTGCCACCAG+TGG + chr7_1:40624530-40624549 None:intergenic 55.0%
CTGGTGGCAAGAAGAAGAGC+TGG - chr7_1:40624530-40624549 Msa1019240:intron 55.0%
AAGACTGTCTAGGGGCAGTC+CGG + chr7_1:40630563-40630582 None:intergenic 55.0%
!!! TGGATGTGCCGACTCGCTTT+TGG - chr7_1:40631050-40631069 Msa1019240:intron 55.0%
!! ACAGCTTAGTGTTGGCTGGC+TGG + chr7_1:40631153-40631172 None:intergenic 55.0%
! CAGCACTACGGCGTTGAAGT+TGG - chr7_1:40631403-40631422 Msa1019240:CDS 55.0%
CCACAGGCCACTATACCTGA+AGG + chr7_1:40631524-40631543 None:intergenic 55.0%
CCTTCAGGTATAGTGGCCTG+TGG - chr7_1:40631521-40631540 Msa1019240:intron 55.0%
CAGGTATAGTGGCCTGTGGA+TGG - chr7_1:40631525-40631544 Msa1019240:intron 55.0%
CAGCAACAACTTCAGCCTCC+TGG + chr7_1:40626480-40626499 None:intergenic 55.0%
CGCCGAACTGCTCTTCAATG+TGG + chr7_1:40632077-40632096 None:intergenic 55.0%
ATTGAAGAGCAGTTCGGCGG+TGG - chr7_1:40632078-40632097 Msa1019240:intron 55.0%
ACCAGGGCGTGATGAAATGC+AGG + chr7_1:40632115-40632134 None:intergenic 55.0%
TCATCACGCCCTGGTCAATG+TGG - chr7_1:40632120-40632139 Msa1019240:intron 55.0%
GTCAATGTGGCAGGGCTGAT+GGG - chr7_1:40626629-40626648 Msa1019240:intron 55.0%
GCAGAGAGACGGAGAGGAAG+AGG - chr7_1:40624326-40624345 Msa1019240:three_prime_UTR 60.0%
GAGAGCAAGCTCCGCCAAGA+TGG - chr7_1:40624359-40624378 Msa1019240:three_prime_UTR 60.0%
AGTGGCACGCCTCTTGTGCA+TGG + chr7_1:40624512-40624531 None:intergenic 60.0%
! ATGCACAAGAGGCGTGCCAC+TGG - chr7_1:40624511-40624530 Msa1019240:intron 60.0%
GCCTGCATTTCATCTCGCCC+TGG - chr7_1:40626607-40626626 Msa1019240:intron 60.0%
TCGCCCTGGTCAATGTGGCA+GGG - chr7_1:40626621-40626640 Msa1019240:intron 60.0%
CAGCCCTGCCACATTGACCA+GGG + chr7_1:40626627-40626646 None:intergenic 60.0%
TCAGCCCTGCCACATTGACC+AGG + chr7_1:40626628-40626647 None:intergenic 60.0%
GGTCAATGTGGCAGGGCTGA+TGG - chr7_1:40626628-40626647 Msa1019240:intron 60.0%
AGTAGCTCCAGTTCAGCGGC+TGG - chr7_1:40627838-40627857 Msa1019240:intron 60.0%
! TCTGGTTCCAGCCGCTGAAC+TGG + chr7_1:40627848-40627867 None:intergenic 60.0%
TTGGGGGCTGCAATTGGCAG+TGG - chr7_1:40628039-40628058 Msa1019240:intron 60.0%
GAAGAAGCGGAGAGAGGGAG+AGG - chr7_1:40629244-40629263 Msa1019240:intron 60.0%
CGGAGAGAGGGAGAGGAAGA+GGG - chr7_1:40629251-40629270 Msa1019240:intron 60.0%
AGAGGGAGAGGAAGAGGGTG+AGG - chr7_1:40629256-40629275 Msa1019240:intron 60.0%
GAGGGAGAGGAAGAGGGTGA+GGG - chr7_1:40629257-40629276 Msa1019240:intron 60.0%
! ATGCACAAGAGGCGTGCCAC+TGG - chr7_1:40624511-40624530 Msa1019240:intron 60.0%
GCCTGCATTTCATCACGCCC+TGG - chr7_1:40632111-40632130 Msa1019240:intron 60.0%
ACGCCCTGGTCAATGTGGCA+GGG - chr7_1:40632125-40632144 Msa1019240:intron 60.0%
CAGCCCTGCCACATTGACCA+GGG + chr7_1:40626627-40626646 None:intergenic 60.0%
TCAGCCCTGCCACATTGACC+AGG + chr7_1:40626628-40626647 None:intergenic 60.0%
GGTCAATGTGGCAGGGCTGA+TGG - chr7_1:40626628-40626647 Msa1019240:intron 60.0%
! CACAAGAGGCGTGCCACTGG+TGG - chr7_1:40624514-40624533 Msa1019240:intron 65.0%
CTCGCCCTGGTCAATGTGGC+AGG - chr7_1:40626620-40626639 Msa1019240:intron 65.0%
GCGGAGAGAGGGAGAGGAAG+AGG - chr7_1:40629250-40629269 Msa1019240:intron 65.0%
! CACAAGAGGCGTGCCACTGG+TGG - chr7_1:40624514-40624533 Msa1019240:intron 65.0%
TGTCTAGGGGCAGTCCGGCT+TGG + chr7_1:40630558-40630577 None:intergenic 65.0%
CACGCCCTGGTCAATGTGGC+AGG - chr7_1:40632124-40632143 Msa1019240:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 40624306 40632638 40624306 ID=Msa1019240;Name=Msa1019240
chr7_1 mRNA 40624306 40632638 40624306 ID=Msa1019240-mRNA-1;Parent=Msa1019240;Name=Msa1019240-mRNA-1;_AED=0.19;_eAED=0.19;_QI=72|0.66|0.53|1|0.66|0.61|13|291|426
chr7_1 exon 40624306 40624511 40624306 ID=Msa1019240-mRNA-1:exon:7917;Parent=Msa1019240-mRNA-1
chr7_1 exon 40624545 40624705 40624545 ID=Msa1019240-mRNA-1:exon:7916;Parent=Msa1019240-mRNA-1
chr7_1 exon 40624790 40624959 40624790 ID=Msa1019240-mRNA-1:exon:7915;Parent=Msa1019240-mRNA-1
chr7_1 exon 40625479 40625601 40625479 ID=Msa1019240-mRNA-1:exon:7914;Parent=Msa1019240-mRNA-1
chr7_1 exon 40625614 40625809 40625614 ID=Msa1019240-mRNA-1:exon:7913;Parent=Msa1019240-mRNA-1
chr7_1 exon 40626952 40627024 40626952 ID=Msa1019240-mRNA-1:exon:7912;Parent=Msa1019240-mRNA-1
chr7_1 exon 40630072 40630077 40630072 ID=Msa1019240-mRNA-1:exon:7911;Parent=Msa1019240-mRNA-1
chr7_1 exon 40630135 40630199 40630135 ID=Msa1019240-mRNA-1:exon:7910;Parent=Msa1019240-mRNA-1
chr7_1 exon 40630294 40630463 40630294 ID=Msa1019240-mRNA-1:exon:7909;Parent=Msa1019240-mRNA-1
chr7_1 exon 40631101 40631211 40631101 ID=Msa1019240-mRNA-1:exon:7908;Parent=Msa1019240-mRNA-1
chr7_1 exon 40631218 40631431 40631218 ID=Msa1019240-mRNA-1:exon:7907;Parent=Msa1019240-mRNA-1
chr7_1 exon 40632378 40632450 40632378 ID=Msa1019240-mRNA-1:exon:7906;Parent=Msa1019240-mRNA-1
chr7_1 exon 40632563 40632638 40632563 ID=Msa1019240-mRNA-1:exon:7905;Parent=Msa1019240-mRNA-1
chr7_1 five_prime_UTR 40632567 40632638 40632567 ID=Msa1019240-mRNA-1:five_prime_utr;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40632563 40632566 40632563 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40632378 40632450 40632378 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40631218 40631431 40631218 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40631101 40631211 40631101 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40630294 40630463 40630294 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40630135 40630199 40630135 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40630072 40630077 40630072 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40626952 40627024 40626952 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40625614 40625809 40625614 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40625479 40625601 40625479 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40624790 40624959 40624790 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 CDS 40624630 40624705 40624630 ID=Msa1019240-mRNA-1:cds;Parent=Msa1019240-mRNA-1
chr7_1 three_prime_UTR 40624545 40624629 40624545 ID=Msa1019240-mRNA-1:three_prime_utr;Parent=Msa1019240-mRNA-1
chr7_1 three_prime_UTR 40624306 40624511 40624306 ID=Msa1019240-mRNA-1:three_prime_utr;Parent=Msa1019240-mRNA-1
Gene Sequence

>Msa1019240

ATGGGTATTTCTAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGAGCTGGAGAAAGAAGCGAAAGTACGAGCTTGGTCGCCAGCCAGCAAACACTAAGCTGTCTAGCAACAAGACAGTCAGGAGGATCCGTGTTAGAGGTGGCAATGTGAAATGGAGAGCTCTTAGATTGGACACTGGAAATTTCTCTTGGGGTAGTGAGGCAGTGACTCGCAAGACTCGTCTTCTCGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTTCGTACTCAGACTCTGAGTGCCATTGTCCAAGTTGATGCTGCTCCATTCAAGCAGTGGTATCTTCAGCACTACGGTGTTGAAGTTGGTAGGAAAAAGAAAACAGCAGCCAAGAAGGATTCTGCAGAGGAGGCTGAAGTTGTTGCTGAAGAAGTTAAGAAAAGTAACCACGTGCAGAGAAAACTTGAGCAGCGTCAGAAAGATAGGCAACTTGATTCCCACATTGAAGAGCAGTTCGGTGGTGGTCGTTTGCTTGCCTGCATTTCATCTCGCCCTGGTCAATGTGGCAGGGCTGATGGGTACATTCTTGAAGGTAAGGAGCTGGAGTTTTACATGAAGAAATTACAGAAAAAGAAGGGAAAGAATATTGGTATTTCAAGAGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGAGCTGGAGAAAGAAGCGAAAGTACGAGCTTGGTCGCCAGCCAGCCAACACTAAGCTGTCTAGCAACAAGACAGTCAGGAGAATCCGTGTTAGAGGTGGCAATGTGAAATGGAGAGCTCTTAGATTGGACACTGGAAATTTCTCGTGGGGTAGTGAGGCAGTGACTCGCAAGACTCGTCTTCTTGATGTGGTTTACAATGCCTCAAACAATGAGCTTACTCTGGTTAAGAGTGCCATTGTCCAAGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGCGTTGAAGTTGGTAGGAAAAAGAAAACAGCAGCCAAGAAGGATTCTGCAGAGGAGGCTGAAGTTGTTGCTGAAGAAGTTAAGAAGAGTAACCACGTGCAGAGAAAACTTGAGCAGCGTCAGAAAGATAGGCAACTTGATTCCCACATTGAAGAGCAGTTCGGCGGTGGACGTTTGCTTGCCTGCATTTCATCACGCCCTGGTCAATGTGGCAGGGCTGATGGGTACATTCTTGAAGGTAAGGAGTTGGAGTTTTACATGAAGAAATTACAGAAAAAGAAGGGAAAGAGTGCTGCTTAA

Protein sequence

>Msa1019240

MGISRDSMHKRRATGGKKKSWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLSAIVQVDAAPFKQWYLQHYGVEVGRKKKTAAKKDSAEEAEVVAEEVKKSNHVQRKLEQRQKDRQLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKNIGISRDSMHKRRATGGKKKSWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELTLVKSAIVQVDAAPFKQWYLQHYGVEVGRKKKTAAKKDSAEEAEVVAEEVKKSNHVQRKLEQRQKDRQLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKSAA*