Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094580 | sp|Q9Y2D8|ADIP_HUMAN | 26.171 | 363 | 239 | 9 | 8 | 348 | 43 | 398 | 1.45e-27 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094580 | G7JVE2 | 92.875 | 407 | 19 | 2 | 1 | 407 | 1 | 397 | 0.0 | 764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0094580 | 0.812226 | 4.716196e-51 | -8.615850e-47 |
| Msa0016670 | Msa0094580 | 0.803780 | 2.960621e-49 | -8.615850e-47 |
| Msa0033880 | Msa0094580 | 0.802181 | 6.338159e-49 | -8.615850e-47 |
| Msa0042280 | Msa0094580 | 0.804574 | 2.024004e-49 | -8.615850e-47 |
| Msa0048180 | Msa0094580 | 0.847781 | 9.308500e-60 | -8.615850e-47 |
| Msa0052610 | Msa0094580 | 0.809390 | 1.937803e-50 | -8.615850e-47 |
| Msa0057610 | Msa0094580 | 0.839519 | 1.510009e-57 | -8.615850e-47 |
| Msa0073670 | Msa0094580 | 0.822871 | 1.878830e-53 | -8.615850e-47 |
| Msa0074320 | Msa0094580 | 0.800265 | 1.563137e-48 | -8.615850e-47 |
| Msa0076040 | Msa0094580 | 0.817416 | 3.335305e-52 | -8.615850e-47 |
| Msa0093850 | Msa0094580 | 0.803273 | 3.772166e-49 | -8.615850e-47 |
| Msa0094580 | Msa0097850 | 0.807457 | 5.007541e-50 | -8.615850e-47 |
| Msa0094580 | Msa0103240 | 0.852389 | 4.767283e-61 | -8.615850e-47 |
| Msa0094580 | Msa0115370 | 0.804444 | 2.154081e-49 | -8.615850e-47 |
| Msa0094580 | Msa0127850 | 0.800509 | 1.393778e-48 | -8.615850e-47 |
| Msa0094580 | Msa0128860 | 0.820034 | 8.489892e-53 | -8.615850e-47 |
| Msa0094580 | Msa0130240 | 0.808249 | 3.397728e-50 | -8.615850e-47 |
| Msa0094580 | Msa0138360 | 0.806472 | 8.092697e-50 | -8.615850e-47 |
| Msa0094580 | Msa0147980 | 0.809604 | 1.743175e-50 | -8.615850e-47 |
| Msa0094580 | Msa0166750 | 0.804711 | 1.894797e-49 | -8.615850e-47 |
| Msa0094580 | Msa0167480 | 0.836932 | 7.003959e-57 | -8.615850e-47 |
| Msa0094580 | Msa0174730 | 0.819491 | 1.129743e-52 | -8.615850e-47 |
| Msa0094580 | Msa0181610 | 0.820076 | 8.302559e-53 | -8.615850e-47 |
| Msa0094580 | Msa0187930 | 0.805592 | 1.239422e-49 | -8.615850e-47 |
| Msa0094580 | Msa0188350 | 0.810971 | 8.838571e-51 | -8.615850e-47 |
| Msa0094580 | Msa0188890 | 0.801368 | 9.304972e-49 | -8.615850e-47 |
| Msa0094580 | Msa0194540 | 0.805230 | 1.475694e-49 | -8.615850e-47 |
| Msa0094580 | Msa0226460 | 0.829672 | 4.515862e-55 | -8.615850e-47 |
| Msa0094580 | Msa0231100 | 0.805964 | 1.035114e-49 | -8.615850e-47 |
| Msa0094580 | Msa0244780 | 0.805525 | 1.280102e-49 | -8.615850e-47 |
| Msa0094580 | Msa0245060 | 0.804005 | 2.658952e-49 | -8.615850e-47 |
| Msa0094580 | Msa0254940 | 0.803844 | 2.871911e-49 | -8.615850e-47 |
| Msa0094580 | Msa0262480 | 0.800192 | 1.617396e-48 | -8.615850e-47 |
| Msa0094580 | Msa0277450 | 0.833737 | 4.489567e-56 | -8.615850e-47 |
| Msa0094580 | Msa0296250 | 0.821792 | 3.344880e-53 | -8.615850e-47 |
| Msa0094580 | Msa0304590 | 0.812127 | 4.957893e-51 | -8.615850e-47 |
| Msa0094580 | Msa0304660 | 0.812062 | 5.120384e-51 | -8.615850e-47 |
| Msa0094580 | Msa0317160 | 0.803960 | 2.716018e-49 | -8.615850e-47 |
| Msa0094580 | Msa0331700 | 0.813550 | 2.418764e-51 | -8.615850e-47 |
| Msa0094580 | Msa0341690 | 0.805421 | 1.345740e-49 | -8.615850e-47 |
| Msa0094580 | Msa0348830 | 0.830010 | 3.736542e-55 | -8.615850e-47 |
| Msa0094580 | Msa0405650 | 0.803988 | 2.680262e-49 | -8.615850e-47 |
| Msa0094580 | Msa0423750 | 0.828200 | 1.026169e-54 | -8.615850e-47 |
| Msa0094580 | Msa0443390 | 0.848594 | 5.548213e-60 | -8.615850e-47 |
| Msa0094580 | Msa0508590 | 0.808127 | 3.608660e-50 | -8.615850e-47 |
| Msa0094580 | Msa0508630 | 0.801546 | 8.557136e-49 | -8.615850e-47 |
| Msa0094580 | Msa0519130 | 0.819277 | 1.263513e-52 | -8.615850e-47 |
| Msa0094580 | Msa0526540 | 0.848158 | 7.322872e-60 | -8.615850e-47 |
| Msa0094580 | Msa0527150 | 0.841585 | 4.346612e-58 | -8.615850e-47 |
| Msa0094580 | Msa0534750 | 0.801755 | 7.752520e-49 | -8.615850e-47 |
| Msa0094580 | Msa0547020 | 0.803113 | 4.071100e-49 | -8.615850e-47 |
| Msa0094580 | Msa0576940 | 0.843088 | 1.737352e-58 | -8.615850e-47 |
| Msa0094580 | Msa0614930 | 0.801732 | 7.836022e-49 | -8.615850e-47 |
| Msa0094580 | Msa0631250 | 0.808960 | 2.395203e-50 | -8.615850e-47 |
| Msa0094580 | Msa0638480 | 0.823878 | 1.092612e-53 | -8.615850e-47 |
| Msa0094580 | Msa0666230 | 0.851031 | 1.156192e-60 | -8.615850e-47 |
| Msa0094580 | Msa0669520 | 0.806399 | 8.384886e-50 | -8.615850e-47 |
| Msa0094580 | Msa0704660 | 0.802004 | 6.890063e-49 | -8.615850e-47 |
| Msa0094580 | Msa0716410 | 0.809891 | 1.512158e-50 | -8.615850e-47 |
| Msa0094580 | Msa0738100 | 0.811206 | 7.861913e-51 | -8.615850e-47 |
| Msa0094580 | Msa0785130 | 0.818658 | 1.747317e-52 | -8.615850e-47 |
| Msa0094580 | Msa0788770 | 0.805038 | 1.619044e-49 | -8.615850e-47 |
| Msa0094580 | Msa0808800 | 0.832016 | 1.202249e-55 | -8.615850e-47 |
| Msa0094580 | Msa0817540 | 0.804789 | 1.824976e-49 | -8.615850e-47 |
| Msa0094580 | Msa0824640 | 0.822847 | 1.902978e-53 | -8.615850e-47 |
| Msa0094580 | Msa0826500 | 0.807271 | 5.484602e-50 | -8.615850e-47 |
| Msa0094580 | Msa0864010 | 0.831378 | 1.727212e-55 | -8.615850e-47 |
| Msa0094580 | Msa0895390 | 0.822211 | 2.674323e-53 | -8.615850e-47 |
| Msa0094580 | Msa0898760 | 0.803319 | 3.689278e-49 | -8.615850e-47 |
| Msa0094580 | Msa0943170 | 0.805881 | 1.077617e-49 | -8.615850e-47 |
| Msa0094580 | Msa0960830 | 0.825198 | 5.340780e-54 | -8.615850e-47 |
| Msa0094580 | Msa0963020 | 0.803596 | 3.232889e-49 | -8.615850e-47 |
| Msa0094580 | Msa0997430 | 0.809285 | 2.040479e-50 | -8.615850e-47 |
| Msa0094580 | Msa1019240 | 0.836233 | 1.055355e-56 | -8.615850e-47 |
| Msa0094580 | Msa1019260 | 0.831455 | 1.652797e-55 | -8.615850e-47 |
| Msa0094580 | Msa1055010 | 0.811335 | 7.372624e-51 | -8.615850e-47 |
| Msa0094580 | Msa1066490 | 0.802014 | 6.856942e-49 | -8.615850e-47 |
| Msa0094580 | Msa1079230 | 0.819929 | 8.970649e-53 | -8.615850e-47 |
| Msa0094580 | Msa1102560 | 0.806006 | 1.014344e-49 | -8.615850e-47 |
| Msa0094580 | Msa1104140 | 0.809446 | 1.884287e-50 | -8.615850e-47 |
| Msa0094580 | Msa1104210 | 0.824049 | 9.964496e-54 | -8.615850e-47 |
| Msa0094580 | Msa1124110 | 0.816672 | 4.900198e-52 | -8.615850e-47 |
| Msa0094580 | Msa1126510 | 0.806350 | 8.584487e-50 | -8.615850e-47 |
| Msa0094580 | Msa1127590 | 0.808362 | 3.214789e-50 | -8.615850e-47 |
| Msa0094580 | Msa1166870 | 0.831886 | 1.294452e-55 | -8.615850e-47 |
| Msa0094580 | Msa1168950 | 0.817977 | 2.492365e-52 | -8.615850e-47 |
| Msa0094580 | Msa1169040 | 0.836228 | 1.057945e-56 | -8.615850e-47 |
| Msa0094580 | Msa1174530 | 0.824258 | 8.899317e-54 | -8.615850e-47 |
| Msa0094580 | Msa1192850 | 0.806034 | 1.000574e-49 | -8.615850e-47 |
| Msa0094580 | Msa1201830 | 0.803025 | 4.245290e-49 | -8.615850e-47 |
| Msa0094580 | Msa1206090 | 0.800276 | 1.554699e-48 | -8.615850e-47 |
| Msa0094580 | Msa1208020 | 0.827310 | 1.678761e-54 | -8.615850e-47 |
| Msa0094580 | Msa1208890 | -0.809970 | 1.453844e-50 | -8.615850e-47 |
| Msa0094580 | Msa1221110 | 0.875383 | 3.218489e-68 | -8.615850e-47 |
| Msa0094580 | Msa1227690 | 0.817729 | 2.835831e-52 | -8.615850e-47 |
| Msa0094580 | Msa1230580 | 0.831209 | 1.900898e-55 | -8.615850e-47 |
| Msa0094580 | Msa1235250 | 0.827890 | 1.218466e-54 | -8.615850e-47 |
| Msa0094580 | Msa1257510 | 0.802552 | 5.314827e-49 | -8.615850e-47 |
| Msa0094580 | Msa1262890 | 0.804594 | 2.004507e-49 | -8.615850e-47 |
| Msa0094580 | Msa1265440 | 0.920683 | 9.374302e-88 | -8.615850e-47 |
| Msa0094580 | Msa1315100 | 0.816053 | 6.743087e-52 | -8.615850e-47 |
| Msa0094580 | Msa1327490 | 0.808820 | 2.566161e-50 | -8.615850e-47 |
| Msa0094580 | Msa1329540 | 0.813453 | 2.540495e-51 | -8.615850e-47 |
| Msa0094580 | Msa1331250 | 0.836510 | 8.972545e-57 | -8.615850e-47 |
| Msa0094580 | Msa1349570 | 0.813628 | 2.324952e-51 | -8.615850e-47 |
| Msa0094580 | Msa1363330 | 0.845109 | 4.983951e-59 | -8.615850e-47 |
| Msa0094580 | Msa1369190 | 0.816314 | 5.893994e-52 | -8.615850e-47 |
| Msa0094580 | Msa1379760 | 0.823454 | 1.373115e-53 | -8.615850e-47 |
| Msa0094580 | Msa1386600 | 0.844787 | 6.089654e-59 | -8.615850e-47 |
| Msa0094580 | Msa1386710 | 0.838499 | 2.773743e-57 | -8.615850e-47 |
| Msa0094580 | Msa1400610 | -0.804303 | 2.304907e-49 | -8.615850e-47 |
| Msa0094580 | Msa1406040 | 0.807121 | 5.899858e-50 | -8.615850e-47 |
| Msa0094580 | Msa1411950 | 0.809846 | 1.546512e-50 | -8.615850e-47 |
| Msa0094580 | Msa1432480 | 0.801730 | 7.845354e-49 | -8.615850e-47 |
| Msa0094580 | Msa1438050 | 0.802530 | 5.371661e-49 | -8.615850e-47 |
| Msa0094580 | Msa1442850 | 0.810417 | 1.164684e-50 | -8.615850e-47 |
| Msa0094580 | Msa1443930 | 0.826673 | 2.383956e-54 | -8.615850e-47 |
| Msa0094580 | Msa1450280 | 0.811549 | 6.624366e-51 | -8.615850e-47 |
| Msa0094580 | Msa1456050 | 0.802410 | 5.685520e-49 | -8.615850e-47 |
| Msa0094580 | Msa1457400 | 0.803176 | 3.950607e-49 | -8.615850e-47 |
| Msa0094580 | Msa1465080 | 0.805773 | 1.135596e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094580 | MtrunA17_Chr4g0072331 | 99.191 | 371 | 3 | 0 | 1 | 371 | 1 | 371 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094580 | AT5G57410.1 | 79.459 | 370 | 73 | 2 | 1 | 370 | 1 | 367 | 0.0 | 595 |
| Msa0094580 | AT5G57410.3 | 79.459 | 370 | 73 | 2 | 1 | 370 | 1 | 367 | 0.0 | 595 |
| Msa0094580 | AT2G18876.1 | 77.657 | 367 | 81 | 1 | 4 | 369 | 6 | 372 | 0.0 | 576 |
| Msa0094580 | AT5G57410.2 | 82.675 | 329 | 55 | 1 | 42 | 370 | 1 | 327 | 0.0 | 549 |
| Msa0094580 | AT2G18876.2 | 79.197 | 274 | 57 | 0 | 96 | 369 | 1 | 274 | 5.87e-155 | 439 |
Find 98 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTAAGTTTAACTATAT+TGG | 0.195896 | 1_2:-77854428 | Msa0094580:exon |
| TAGCAGAAAATGCTGATTTA+AGG | 0.209461 | 1_2:-77857396 | Msa0094580:CDS |
| TCTAATATCTATTATGTCTT+TGG | 0.215019 | 1_2:+77859179 | None:intergenic |
| ACTTGCATGACATTTAAAAT+TGG | 0.254868 | 1_2:-77854196 | Msa0094580:three_prime_UTR |
| CTGAAGGAGACTTAGATCTT+AGG | 0.266475 | 1_2:-77859083 | Msa0094580:CDS |
| ATTCGCCGATGTAAACAATT+TGG | 0.268664 | 1_2:-77858857 | Msa0094580:CDS |
| CTTTCTGAGCATCTTGCAAT+TGG | 0.281888 | 1_2:+77856201 | None:intergenic |
| CCCCTTAGTTCTTATGTAAC+AGG | 0.287649 | 1_2:-77854339 | Msa0094580:three_prime_UTR |
| GAATTTCAGAGGATGGTTAT+TGG | 0.312259 | 1_2:-77858105 | Msa0094580:CDS |
| GGAGATAATGAATTTGCTTC+AGG | 0.322573 | 1_2:-77857697 | Msa0094580:intron |
| GAGGATGGTTATTGGTAATC+AGG | 0.324855 | 1_2:-77858097 | Msa0094580:intron |
| CTAAGATCTAAGTCTCCTTC+AGG | 0.332420 | 1_2:+77859084 | None:intergenic |
| GTCGATTACGCGCATGCAAA+TGG | 0.333656 | 1_2:-77855227 | Msa0094580:CDS |
| TCTCATTCTGCTTTCACAAC+CGG | 0.335124 | 1_2:-77858977 | Msa0094580:CDS |
| AGCAAAGATGGCTTCTATAA+AGG | 0.358500 | 1_2:-77856336 | Msa0094580:intron |
| GATCGGTGCTAAAGCAAGTT+AGG | 0.379032 | 1_2:-77857977 | Msa0094580:intron |
| AACCAATCACTCGTTACATT+TGG | 0.384759 | 1_2:-77858814 | Msa0094580:CDS |
| TTTCATTAGTAGTGGGAGAT+TGG | 0.404934 | 1_2:+77856538 | None:intergenic |
| AAAGGAATACATTAAGTTGC+AGG | 0.407699 | 1_2:-77857922 | Msa0094580:intron |
| CTCATTCTGCTTTCACAACC+GGG | 0.410022 | 1_2:-77858976 | Msa0094580:intron |
| AATTAGTGATATTGTGATCT+TGG | 0.410326 | 1_2:-77854268 | Msa0094580:three_prime_UTR |
| AGCAGAAAATGCTGATTTAA+GGG | 0.431389 | 1_2:-77857395 | Msa0094580:CDS |
| GCTAAAGTTGAGAGGCTTGA+TGG | 0.431843 | 1_2:-77858446 | Msa0094580:CDS |
| GAGGGATGAATTTCAGAGGA+TGG | 0.437656 | 1_2:-77858112 | Msa0094580:CDS |
| GAGACTAAACCAAGTGTTGA+TGG | 0.441272 | 1_2:-77857748 | Msa0094580:CDS |
| TTGATGTTATAGATTGTTGT+CGG | 0.446064 | 1_2:-77858486 | Msa0094580:intron |
| TGAAGGAGACTTAGATCTTA+GGG | 0.451843 | 1_2:-77859082 | Msa0094580:intron |
| GATTGGTTTGGTAGTCCGTT+AGG | 0.455596 | 1_2:+77856555 | None:intergenic |
| GGCCTGTTACATAAGAACTA+AGG | 0.461812 | 1_2:+77854337 | None:intergenic |
| GAGAATAGATCAAGTGAAGC+AGG | 0.463962 | 1_2:+77858787 | None:intergenic |
| ATGAAAGGTGGACGCTTATG+AGG | 0.465264 | 1_2:-77857437 | Msa0094580:intron |
| TCTTCTTCTCCATCAACACT+TGG | 0.465829 | 1_2:+77857739 | None:intergenic |
| AAGGAGCATTATACAAGAGC+AGG | 0.468589 | 1_2:-77856114 | Msa0094580:intron |
| GACATTTAAAATTGGTAACT+AGG | 0.475823 | 1_2:-77854188 | Msa0094580:three_prime_UTR |
| AACCAAATGTAACGAGTGAT+TGG | 0.476259 | 1_2:+77858812 | None:intergenic |
| AGGCAACGTGGAACATGGAA+TGG | 0.477813 | 1_2:-77857574 | Msa0094580:CDS |
| AACATCTTGCAAAGTCTGAC+AGG | 0.478571 | 1_2:-77855646 | Msa0094580:CDS |
| TGAGATGAAGAAGAAGGAAA+AGG | 0.485631 | 1_2:-77857940 | Msa0094580:CDS |
| CAGGGAATCGGCACCGGCTG+AGG | 0.485878 | 1_2:-77855539 | Msa0094580:intron |
| ATGATGAAAATAAATGAAAT+CGG | 0.487343 | 1_2:+77859225 | None:intergenic |
| TAAGATCTAAGTCTCCTTCA+GGG | 0.487351 | 1_2:+77859085 | None:intergenic |
| AGAGAGTCTAAGAGCAAAGA+TGG | 0.492833 | 1_2:-77856348 | Msa0094580:CDS |
| TTAGTAGTGGGAGATTGGTT+TGG | 0.493506 | 1_2:+77856543 | None:intergenic |
| TCGATTACGCGCATGCAAAT+GGG | 0.500333 | 1_2:-77855226 | Msa0094580:CDS |
| CCTTCACATTCTCCGATGGT+TGG | 0.509391 | 1_2:-77856501 | Msa0094580:CDS |
| TGATCTCTAGCCATGTGAAA+AGG | 0.512834 | 1_2:+77856377 | None:intergenic |
| TAACTATATTGGCTCTGTAG+TGG | 0.526470 | 1_2:-77854417 | Msa0094580:three_prime_UTR |
| TTCTCCGATGGTTGGAAGAA+CGG | 0.529147 | 1_2:-77856493 | Msa0094580:intron |
| GGCAACGTGGAACATGGAAT+GGG | 0.529540 | 1_2:-77857573 | Msa0094580:CDS |
| GCCTGTTACATAAGAACTAA+GGG | 0.536150 | 1_2:+77854338 | None:intergenic |
| GACAAGCAAGATTAGTTACA+TGG | 0.536778 | 1_2:+77854376 | None:intergenic |
| AATACATGAGATGAAGAAGA+AGG | 0.539316 | 1_2:-77857946 | Msa0094580:CDS |
| TGGAGAAGAAGAAAGAATCT+AGG | 0.539755 | 1_2:-77857728 | Msa0094580:CDS |
| GAAAGAATCTAGGTCGGGCA+TGG | 0.541566 | 1_2:-77857718 | Msa0094580:CDS |
| ATTGCAAGATGCTCAGAAAG+AGG | 0.551306 | 1_2:-77856198 | Msa0094580:CDS |
| GGCATTGTTGAGATCAATGC+AGG | 0.551330 | 1_2:-77857374 | Msa0094580:intron |
| AAGCTCAACTTGTTGAAGCA+AGG | 0.554611 | 1_2:-77856133 | Msa0094580:CDS |
| TAACATGGCTGAGGGTACTC+AGG | 0.557067 | 1_2:-77854464 | Msa0094580:CDS |
| ACAACAATGCCTTCCCCTGA+AGG | 0.557896 | 1_2:-77859099 | Msa0094580:exon |
| CATAAAATACATACCTCAGC+CGG | 0.561677 | 1_2:+77855526 | None:intergenic |
| AAGAAGAAAGAATCTAGGTC+GGG | 0.563858 | 1_2:-77857723 | Msa0094580:CDS |
| TTGCAAAGTCTGACAGGCCA+AGG | 0.565306 | 1_2:-77855640 | Msa0094580:intron |
| GTATGCAACTAACATGGCTG+AGG | 0.567804 | 1_2:-77854473 | Msa0094580:CDS |
| CATACCGTTCTTCCAACCAT+CGG | 0.570593 | 1_2:+77856489 | None:intergenic |
| TTGAAATATGAAGGAGCGCA+TGG | 0.571327 | 1_2:-77856225 | Msa0094580:intron |
| ATTATGTCTTTGGCTTTAAG+CGG | 0.574405 | 1_2:+77859189 | None:intergenic |
| AAGGGAGGCAACGTGGAACA+TGG | 0.578914 | 1_2:-77857579 | Msa0094580:CDS |
| TCTAAGTCTCCTTCAGGGGA+AGG | 0.580264 | 1_2:+77859090 | None:intergenic |
| ATGTTCCAAATTGTTTACAT+CGG | 0.582928 | 1_2:+77858852 | None:intergenic |
| TAATCCTTCACATTCTCCGA+TGG | 0.586438 | 1_2:-77856505 | Msa0094580:CDS |
| GTGAAAGCAGAATGAGAAGA+TGG | 0.586466 | 1_2:+77858983 | None:intergenic |
| GAAAGAGGCAGAAGTCACTT+CGG | 0.590207 | 1_2:-77856183 | Msa0094580:CDS |
| TGTGGTAGGTTTCTATAGCA+AGG | 0.590695 | 1_2:-77858670 | Msa0094580:intron |
| TTATGTAACAGGCCATCGTA+TGG | 0.600689 | 1_2:-77854328 | Msa0094580:three_prime_UTR |
| GATGTGCATAAACAGAAGGA+AGG | 0.605299 | 1_2:-77857598 | Msa0094580:intron |
| CAGGGAGTATGCAACTAACA+TGG | 0.608511 | 1_2:-77854479 | Msa0094580:CDS |
| AAAAGTTATTAATGTCTCGA+GGG | 0.611410 | 1_2:-77854227 | Msa0094580:three_prime_UTR |
| AGAATAGATCAAGTGAAGCA+GGG | 0.616733 | 1_2:+77858788 | None:intergenic |
| GAAGAAGAAAGAATCTAGGT+CGG | 0.617695 | 1_2:-77857724 | Msa0094580:CDS |
| GATTTCTTAAATGCTCCTAA+CGG | 0.620088 | 1_2:-77856570 | Msa0094580:CDS |
| ATGTGCATAAACAGAAGGAA+GGG | 0.622972 | 1_2:-77857597 | Msa0094580:intron |
| AAGAGAGGGATGAATTTCAG+AGG | 0.623845 | 1_2:-77858116 | Msa0094580:CDS |
| CTGTTACATAAGAACTAAGG+GGG | 0.635206 | 1_2:+77854340 | None:intergenic |
| CCAACCATCGGAGAATGTGA+AGG | 0.644590 | 1_2:+77856501 | None:intergenic |
| GATACGAGGCTAAAGTTGAG+AGG | 0.644683 | 1_2:-77858454 | Msa0094580:CDS |
| GATCTTGGAAGTGCTTCTAG+AGG | 0.648115 | 1_2:-77854253 | Msa0094580:three_prime_UTR |
| AAGATCTAAGTCTCCTTCAG+GGG | 0.653936 | 1_2:+77859086 | None:intergenic |
| ACAAGCAAGATTAGTTACAT+GGG | 0.661523 | 1_2:+77854377 | None:intergenic |
| TGCATAAACAGAAGGAAGGG+AGG | 0.662009 | 1_2:-77857594 | Msa0094580:intron |
| CAGAAGGAAGGGAGGCAACG+TGG | 0.662298 | 1_2:-77857586 | Msa0094580:CDS |
| AATGACATTCGACCATACGA+TGG | 0.672330 | 1_2:+77854316 | None:intergenic |
| GATAGCGACGATAACTAGAA+CGG | 0.680604 | 1_2:-77858399 | Msa0094580:intron |
| CCTGTTACATAAGAACTAAG+GGG | 0.690405 | 1_2:+77854339 | None:intergenic |
| TATGCAACTAACATGGCTGA+GGG | 0.693043 | 1_2:-77854472 | Msa0094580:CDS |
| ATTACGCGCATGCAAATGGG+AGG | 0.694251 | 1_2:-77855223 | Msa0094580:intron |
| GTCGGATATATCAAGATACG+AGG | 0.705974 | 1_2:-77858468 | Msa0094580:CDS |
| TGTTACATAAGAACTAAGGG+GGG | 0.728256 | 1_2:+77854341 | None:intergenic |
| CTGCGAATGAACAAAGACAA+CGG | 0.734178 | 1_2:-77858586 | Msa0094580:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAGTTTATAATGATA+GGG | + | chr1_2:77855930-77855949 | None:intergenic | 10.0% |
| !! | AATATAAAGTTTATAATGAT+AGG | + | chr1_2:77855931-77855950 | None:intergenic | 10.0% |
| !!! | TATTTTATTTTGTAATGATT+AGG | - | chr1_2:77858055-77858074 | Msa0094580:intron | 10.0% |
| !!! | ATTTTATTTTGTAATGATTA+GGG | - | chr1_2:77858056-77858075 | Msa0094580:intron | 10.0% |
| !! | ATGATGAAAATAAATGAAAT+CGG | + | chr1_2:77854207-77854226 | None:intergenic | 15.0% |
| !! | GAAATTAAAGAAGAAAAAAA+GGG | + | chr1_2:77854396-77854415 | None:intergenic | 15.0% |
| !! | AGAAATTAAAGAAGAAAAAA+AGG | + | chr1_2:77854397-77854416 | None:intergenic | 15.0% |
| !!! | ATGATTTTAAATTATGGTTT+TGG | - | chr1_2:77855060-77855079 | Msa0094580:intron | 15.0% |
| !!! | CTAACATTATTTTGTAAATA+AGG | + | chr1_2:77855142-77855161 | None:intergenic | 15.0% |
| !! | TCATTATAAACTTTATATTC+TGG | - | chr1_2:77855932-77855951 | Msa0094580:intron | 15.0% |
| !! | TTTATTATAATAATGAAAGG+TGG | - | chr1_2:77855980-77855999 | Msa0094580:intron | 15.0% |
| !!! | TTCATAAATTTTTTATGCTT+TGG | - | chr1_2:77856342-77856361 | Msa0094580:CDS | 15.0% |
| !!! | TCATAAATTTTTTATGCTTT+GGG | - | chr1_2:77856343-77856362 | Msa0094580:CDS | 15.0% |
| !! | TATAAATTCTTTAATGCATT+TGG | - | chr1_2:77856538-77856557 | Msa0094580:CDS | 15.0% |
| !! | ATAAATTCTTTAATGCATTT+GGG | - | chr1_2:77856539-77856558 | Msa0094580:CDS | 15.0% |
| !!! | ATTTACTTTTTGAATTTTAC+AGG | - | chr1_2:77857871-77857890 | Msa0094580:intron | 15.0% |
| !!! | TTTACTTTTTGAATTTTACA+GGG | - | chr1_2:77857872-77857891 | Msa0094580:intron | 15.0% |
| !! | ATGATTAAGTTTAACTATAT+TGG | - | chr1_2:77859001-77859020 | Msa0094580:intron | 15.0% |
| !! | TCTAATATCTATTATGTCTT+TGG | + | chr1_2:77854253-77854272 | None:intergenic | 20.0% |
| !! | ATCAAAGATCAAAATTCTTA+CGG | + | chr1_2:77854676-77854695 | None:intergenic | 20.0% |
| !!! | TTTGTTCTTGTTTTTGAAAA+TGG | - | chr1_2:77854721-77854740 | Msa0094580:intron | 20.0% |
| !! | TATCAATCTTACTATTTGAT+CGG | - | chr1_2:77855435-77855454 | Msa0094580:intron | 20.0% |
| !! | ATTAGACTTAGAAATATGAA+AGG | - | chr1_2:77855636-77855655 | Msa0094580:intron | 20.0% |
| !!! | TTGTGAATTTTGTGATAATT+TGG | - | chr1_2:77855801-77855820 | Msa0094580:intron | 20.0% |
| !! | ATTTATGAATGAAATGAGAA+CGG | + | chr1_2:77856331-77856350 | None:intergenic | 20.0% |
| !!! | CATAAATTTTTTATGCTTTG+GGG | - | chr1_2:77856344-77856363 | Msa0094580:CDS | 20.0% |
| !! | TAAATTCTTTAATGCATTTG+GGG | - | chr1_2:77856540-77856559 | Msa0094580:CDS | 20.0% |
| !! | CAAAATAAAAATTACAACGA+TGG | + | chr1_2:77856712-77856731 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTTATTTTGCGT+AGG | - | chr1_2:77856715-77856734 | Msa0094580:intron | 20.0% |
| !! | TAACAAACTCATAAATTTCA+TGG | + | chr1_2:77857010-77857029 | None:intergenic | 20.0% |
| !! | ATATATGAATTGTTTGTGTT+TGG | - | chr1_2:77857163-77857182 | Msa0094580:intron | 20.0% |
| !!! | AAACTAAATTGCTATTGAAT+TGG | - | chr1_2:77857507-77857526 | Msa0094580:intron | 20.0% |
| !! | GAAAATAAGATACATGTTTA+GGG | + | chr1_2:77857595-77857614 | None:intergenic | 20.0% |
| !! | TGAAAATAAGATACATGTTT+AGG | + | chr1_2:77857596-77857615 | None:intergenic | 20.0% |
| !! | CAAATTCACACTATAAAATT+AGG | + | chr1_2:77857986-77858005 | None:intergenic | 20.0% |
| !!! | ATTTTATAGTGTGAATTTGT+TGG | - | chr1_2:77857987-77858006 | Msa0094580:intron | 20.0% |
| !!! | CTTTAAAGAACATTAGAAAT+GGG | - | chr1_2:77858551-77858570 | Msa0094580:intron | 20.0% |
| !!! | CAATTTTACCATATTATTAC+AGG | + | chr1_2:77858834-77858853 | None:intergenic | 20.0% |
| ! | AAGAAAAAATGAGACAGTTA+GGG | + | chr1_2:77854422-77854441 | None:intergenic | 25.0% |
| ! | AAAGAAAAAATGAGACAGTT+AGG | + | chr1_2:77854423-77854442 | None:intergenic | 25.0% |
| ! | ATGTTCCAAATTGTTTACAT+CGG | + | chr1_2:77854580-77854599 | None:intergenic | 25.0% |
| ! | TCAAAGATCAAAATTCTTAC+GGG | + | chr1_2:77854675-77854694 | None:intergenic | 25.0% |
| !!! | GGTTCAATTTTGATATCATT+AGG | - | chr1_2:77854871-77854890 | Msa0094580:intron | 25.0% |
| ! | TTGATGTTATAGATTGTTGT+CGG | - | chr1_2:77854943-77854962 | Msa0094580:intron | 25.0% |
| !! | GAGGCAATGATTTTAAATTA+TGG | - | chr1_2:77855054-77855073 | Msa0094580:intron | 25.0% |
| !!! | CTTTTGTTGTTTAATGTGAA+TGG | - | chr1_2:77855544-77855563 | Msa0094580:intron | 25.0% |
| !! | GTTTAATGTGAATGGTATTT+TGG | - | chr1_2:77855552-77855571 | Msa0094580:intron | 25.0% |
| ! | TTTCTAAGTCTAATAACTTG+CGG | + | chr1_2:77855630-77855649 | None:intergenic | 25.0% |
| ! | AAGGAAAATCAATGAAACAT+GGG | + | chr1_2:77856158-77856177 | None:intergenic | 25.0% |
| !! | ATTTGGGGAACTAATTATTT+TGG | - | chr1_2:77856555-77856574 | Msa0094580:CDS | 25.0% |
| ! | CAATAATAACTAAATGGAAC+CGG | - | chr1_2:77856612-77856631 | Msa0094580:intron | 25.0% |
| ! | AATAATAACTAAATGGAACC+GGG | - | chr1_2:77856613-77856632 | Msa0094580:intron | 25.0% |
| ! | AACATGAACTCTAATAAATC+TGG | - | chr1_2:77856647-77856666 | Msa0094580:intron | 25.0% |
| ! | TGGGTATTATTATAGAACAA+CGG | + | chr1_2:77856766-77856785 | None:intergenic | 25.0% |
| ! | ACTTACAAATCTCATAATCT+AGG | + | chr1_2:77856814-77856833 | None:intergenic | 25.0% |
| !!! | TTTGTAAGTGTATTGATTAC+AGG | - | chr1_2:77856825-77856844 | Msa0094580:intron | 25.0% |
| !! | TCAGATTTTTCATTAGTAGT+GGG | + | chr1_2:77856901-77856920 | None:intergenic | 25.0% |
| !! | TTCAGATTTTTCATTAGTAG+TGG | + | chr1_2:77856902-77856921 | None:intergenic | 25.0% |
| ! | TATATGCAAGTACTTAATGA+TGG | + | chr1_2:77857148-77857167 | None:intergenic | 25.0% |
| !! | ATTTTGCATCATAGTAAAAC+AGG | + | chr1_2:77857394-77857413 | None:intergenic | 25.0% |
| !! | CATAAAGAACTAATTTGCAT+TGG | + | chr1_2:77857477-77857496 | None:intergenic | 25.0% |
| !!! | ATTGAATTGGTGTTTCTTTT+AGG | - | chr1_2:77857520-77857539 | Msa0094580:intron | 25.0% |
| !! | TTTTGAATTTTACAGGGAAT+CGG | - | chr1_2:77857878-77857897 | Msa0094580:intron | 25.0% |
| ! | ACTAATAGGAAAATTTATCC+AGG | + | chr1_2:77858258-77858277 | None:intergenic | 25.0% |
| ! | TACAACTTAATTAGCATGAT+AGG | - | chr1_2:77858361-77858380 | Msa0094580:intron | 25.0% |
| ! | TCACAAAACGTTAAAAAGTT+AGG | + | chr1_2:77858399-77858418 | None:intergenic | 25.0% |
| !!! | GCTTTAAAGAACATTAGAAA+TGG | - | chr1_2:77858550-77858569 | Msa0094580:intron | 25.0% |
| !! | ATGATCATATTGGTAGTAAT+TGG | - | chr1_2:77858805-77858824 | Msa0094580:CDS | 25.0% |
| ! | ATCTACTTCTAAATGTAAAG+TGG | + | chr1_2:77858863-77858882 | None:intergenic | 25.0% |
| !! | ATTGTTCTTTTCTGATTTAC+AGG | - | chr1_2:77858931-77858950 | Msa0094580:intron | 25.0% |
| !! | TTGTTCTTTTCTGATTTACA+GGG | - | chr1_2:77858932-77858951 | Msa0094580:intron | 25.0% |
| ! | AATTAGTGATATTGTGATCT+TGG | - | chr1_2:77859161-77859180 | Msa0094580:five_prime_UTR | 25.0% |
| ! | AAAAAGTTATTAATGTCTCG+AGG | - | chr1_2:77859201-77859220 | Msa0094580:five_prime_UTR | 25.0% |
| ! | AAAAGTTATTAATGTCTCGA+GGG | - | chr1_2:77859202-77859221 | Msa0094580:five_prime_UTR | 25.0% |
| !! | ACTTGCATGACATTTAAAAT+TGG | - | chr1_2:77859233-77859252 | Msa0094580:five_prime_UTR | 25.0% |
| !! | GACATTTAAAATTGGTAACT+AGG | - | chr1_2:77859241-77859260 | Msa0094580:five_prime_UTR | 25.0% |
| !!! | GGTGTTTCTTTGTTTTTGTT+GGG | + | chr1_2:77854186-77854205 | None:intergenic | 30.0% |
| !! | ATTATGTCTTTGGCTTTAAG+CGG | + | chr1_2:77854243-77854262 | None:intergenic | 30.0% |
| AGAGAGAATTGAAGATGATA+GGG | + | chr1_2:77854490-77854509 | None:intergenic | 30.0% | |
| AAGAGAGAATTGAAGATGAT+AGG | + | chr1_2:77854491-77854510 | None:intergenic | 30.0% | |
| !!! | TGGTGTTGTTTTTGAAAATG+TGG | - | chr1_2:77854741-77854760 | Msa0094580:intron | 30.0% |
| !!! | GTTGTTTTTGAAAATGTGGT+AGG | - | chr1_2:77854745-77854764 | Msa0094580:intron | 30.0% |
| !!! | TGTTTGTTTTTGCTCTTTAG+CGG | - | chr1_2:77855168-77855187 | Msa0094580:intron | 30.0% |
| ! | AAGTGTTAACTCTCTTGTTT+AGG | - | chr1_2:77855242-77855261 | Msa0094580:CDS | 30.0% |
| ! | TTTTTGCAGCTTCTCAATTT+GGG | + | chr1_2:77855295-77855314 | None:intergenic | 30.0% |
| ! | CTACAACTCCTACTTTAAAA+TGG | - | chr1_2:77855396-77855415 | Msa0094580:intron | 30.0% |
| !!! | GAGCTAATCCATTTTAAAGT+AGG | + | chr1_2:77855407-77855426 | None:intergenic | 30.0% |
| AATACATGAGATGAAGAAGA+AGG | - | chr1_2:77855483-77855502 | Msa0094580:intron | 30.0% | |
| ! | AAAGGAATACATTAAGTTGC+AGG | - | chr1_2:77855507-77855526 | Msa0094580:intron | 30.0% |
| ! | TTCTAAGTCTAATAACTTGC+GGG | + | chr1_2:77855629-77855648 | None:intergenic | 30.0% |
| !! | TAGCAGAAAATGCTGATTTA+AGG | - | chr1_2:77856033-77856052 | Msa0094580:intron | 30.0% |
| !! | AGCAGAAAATGCTGATTTAA+GGG | - | chr1_2:77856034-77856053 | Msa0094580:intron | 30.0% |
| AGGAAAATCAATGAAACATG+GGG | + | chr1_2:77856157-77856176 | None:intergenic | 30.0% | |
| CAAGGAAAATCAATGAAACA+TGG | + | chr1_2:77856159-77856178 | None:intergenic | 30.0% | |
| ! | GATTTTCCTTGATGTGATTT+TGG | - | chr1_2:77856168-77856187 | Msa0094580:CDS | 30.0% |
| GAAAATCCAAAATCACATCA+AGG | + | chr1_2:77856177-77856196 | None:intergenic | 30.0% | |
| TAACGTGTTCATTCTTTAAG+AGG | - | chr1_2:77856244-77856263 | Msa0094580:intron | 30.0% | |
| AAATGAGAACGGAATTAAAG+TGG | + | chr1_2:77856320-77856339 | None:intergenic | 30.0% | |
| CAAAAATTTCTCTGATGCTT+GGG | + | chr1_2:77856472-77856491 | None:intergenic | 30.0% | |
| !!! | ATCAGAGAAATTTTTGGTGT+TGG | - | chr1_2:77856476-77856495 | Msa0094580:intron | 30.0% |
| GGATGGCAATAATAACTAAA+TGG | - | chr1_2:77856606-77856625 | Msa0094580:intron | 30.0% | |
| ! | TCATGTTTTCCTTTTTTTCC+CGG | + | chr1_2:77856634-77856653 | None:intergenic | 30.0% |
| GATTTCTTAAATGCTCCTAA+CGG | - | chr1_2:77856859-77856878 | Msa0094580:intron | 30.0% | |
| !! | TTTATGAGTTTGTTACTTGC+AGG | - | chr1_2:77857015-77857034 | Msa0094580:intron | 30.0% |
| ! | ATTTGATCTTCCTTTTCACA+TGG | - | chr1_2:77857042-77857061 | Msa0094580:intron | 30.0% |
| TGTTTGTGTTTGGTTGTTAA+CGG | - | chr1_2:77857173-77857192 | Msa0094580:intron | 30.0% | |
| GCTTGAAAGTTGAAATATGA+AGG | - | chr1_2:77857195-77857214 | Msa0094580:intron | 30.0% | |
| ! | GCTATTCATCTGATGTTTTA+TGG | - | chr1_2:77857444-77857463 | Msa0094580:intron | 30.0% |
| ! | ATCTGATGTTTTATGGTGTT+TGG | - | chr1_2:77857451-77857470 | Msa0094580:intron | 30.0% |
| ! | ACTTATAAGTCCATGTCTTT+TGG | - | chr1_2:77857560-77857579 | Msa0094580:CDS | 30.0% |
| GTGATAATATGTTGTATTGC+AGG | - | chr1_2:77857745-77857764 | Msa0094580:CDS | 30.0% | |
| AGAAAACACTAAGAATACCT+TGG | + | chr1_2:77857809-77857828 | None:intergenic | 30.0% | |
| ! | TGTTTGTCTGTTTCATGTTT+TGG | - | chr1_2:77857930-77857949 | Msa0094580:CDS | 30.0% |
| ! | GTTTGTCTGTTTCATGTTTT+GGG | - | chr1_2:77857931-77857950 | Msa0094580:CDS | 30.0% |
| !! | TTATAGTGTGAATTTGTTGG+TGG | - | chr1_2:77857990-77858009 | Msa0094580:intron | 30.0% |
| CCTCGATAAACATAACTAAT+AGG | + | chr1_2:77858272-77858291 | None:intergenic | 30.0% | |
| CCTATTAGTTATGTTTATCG+AGG | - | chr1_2:77858269-77858288 | Msa0094580:intron | 30.0% | |
| GTTATGTTTATCGAGGTTAT+AGG | - | chr1_2:77858276-77858295 | Msa0094580:intron | 30.0% | |
| TTGATCTGATTAAAATCCAC+TGG | - | chr1_2:77858443-77858462 | Msa0094580:CDS | 30.0% | |
| !!! | TCCAGTTTTAAAGATACAAC+TGG | - | chr1_2:77858509-77858528 | Msa0094580:intron | 30.0% |
| !! | ACCAGTTGTATCTTTAAAAC+TGG | + | chr1_2:77858513-77858532 | None:intergenic | 30.0% |
| TTCAACTATTAATGCTGACA+TGG | - | chr1_2:77858613-77858632 | Msa0094580:CDS | 30.0% | |
| ATTGGAAGCCTGTAATAATA+TGG | - | chr1_2:77858823-77858842 | Msa0094580:CDS | 30.0% | |
| ATTATTAATTGCGTCCCAAT+TGG | - | chr1_2:77858885-77858904 | Msa0094580:intron | 30.0% | |
| AAAGAACAATATCACAACAC+AGG | + | chr1_2:77858921-77858940 | None:intergenic | 30.0% | |
| ! | ACAAGCAAGATTAGTTACAT+GGG | + | chr1_2:77859055-77859074 | None:intergenic | 30.0% |
| !!! | GTTTCTTTGTTTTTGTTGGG+CGG | + | chr1_2:77854183-77854202 | None:intergenic | 35.0% |
| !!! | CGGTGTTTCTTTGTTTTTGT+TGG | + | chr1_2:77854187-77854206 | None:intergenic | 35.0% |
| TAAGATCTAAGTCTCCTTCA+GGG | + | chr1_2:77854347-77854366 | None:intergenic | 35.0% | |
| TGAAGGAGACTTAGATCTTA+GGG | - | chr1_2:77854347-77854366 | Msa0094580:three_prime_UTR | 35.0% | |
| TCTTCAATTCTCTCTTTCGT+AGG | - | chr1_2:77854495-77854514 | Msa0094580:intron | 35.0% | |
| CTTCAATTCTCTCTTTCGTA+GGG | - | chr1_2:77854496-77854515 | Msa0094580:intron | 35.0% | |
| ATTCGCCGATGTAAACAATT+TGG | - | chr1_2:77854572-77854591 | Msa0094580:intron | 35.0% | |
| AACCAATCACTCGTTACATT+TGG | - | chr1_2:77854615-77854634 | Msa0094580:intron | 35.0% | |
| AACCAAATGTAACGAGTGAT+TGG | + | chr1_2:77854620-77854639 | None:intergenic | 35.0% | |
| AGAATAGATCAAGTGAAGCA+GGG | + | chr1_2:77854644-77854663 | None:intergenic | 35.0% | |
| TGAACAAAGACAACGGTAAT+TGG | - | chr1_2:77854850-77854869 | Msa0094580:intron | 35.0% | |
| TCTGTGTTTGTTTGTGTGTT+TGG | - | chr1_2:77854901-77854920 | Msa0094580:intron | 35.0% | |
| !!! | TTGTTTTGGGTACAATCTAG+TGG | - | chr1_2:77855199-77855218 | Msa0094580:intron | 35.0% |
| TAAAAATACTGCAGCTCTCA+AGG | - | chr1_2:77855269-77855288 | Msa0094580:intron | 35.0% | |
| ! | CTTTTTGCAGCTTCTCAATT+TGG | + | chr1_2:77855296-77855315 | None:intergenic | 35.0% |
| GAATTTCAGAGGATGGTTAT+TGG | - | chr1_2:77855324-77855343 | Msa0094580:intron | 35.0% | |
| TGAGATGAAGAAGAAGGAAA+AGG | - | chr1_2:77855489-77855508 | Msa0094580:intron | 35.0% | |
| ! | GAATACATTAAGTTGCAGGT+AGG | - | chr1_2:77855511-77855530 | Msa0094580:intron | 35.0% |
| GGGTTCGTGAAATAATTCAA+TGG | + | chr1_2:77855609-77855628 | None:intergenic | 35.0% | |
| GACTTAGAAATATGAAAGGC+TGG | - | chr1_2:77855640-77855659 | Msa0094580:intron | 35.0% | |
| TGGAGAAGAAGAAAGAATCT+AGG | - | chr1_2:77855701-77855720 | Msa0094580:intron | 35.0% | |
| GAAGAAGAAAGAATCTAGGT+CGG | - | chr1_2:77855705-77855724 | Msa0094580:intron | 35.0% | |
| AAGAAGAAAGAATCTAGGTC+GGG | - | chr1_2:77855706-77855725 | Msa0094580:intron | 35.0% | |
| ! | GGAGATAATGAATTTGCTTC+AGG | - | chr1_2:77855732-77855751 | Msa0094580:intron | 35.0% |
| AACATTCAAAACTACGTGGA+TGG | + | chr1_2:77855764-77855783 | None:intergenic | 35.0% | |
| AAGCAACATTCAAAACTACG+TGG | + | chr1_2:77855768-77855787 | None:intergenic | 35.0% | |
| TTGTGATGTGCATAAACAGA+AGG | - | chr1_2:77855827-77855846 | Msa0094580:intron | 35.0% | |
| ATGTGCATAAACAGAAGGAA+GGG | - | chr1_2:77855832-77855851 | Msa0094580:intron | 35.0% | |
| ACATGGGGAAAAAAACACAT+AGG | + | chr1_2:77856142-77856161 | None:intergenic | 35.0% | |
| ! | TTCATTCTTTAAGAGGTCTC+TGG | - | chr1_2:77856251-77856270 | Msa0094580:intron | 35.0% |
| ! | TCATTCTTTAAGAGGTCTCT+GGG | - | chr1_2:77856252-77856271 | Msa0094580:intron | 35.0% |
| GTTAGCATTAGAGAGAAACT+TGG | - | chr1_2:77856381-77856400 | Msa0094580:CDS | 35.0% | |
| CCAAAAATTTCTCTGATGCT+TGG | + | chr1_2:77856473-77856492 | None:intergenic | 35.0% | |
| ! | CCAAGCATCAGAGAAATTTT+TGG | - | chr1_2:77856470-77856489 | Msa0094580:intron | 35.0% |
| !!! | AGAGAAATTTTTGGTGTTGG+TGG | - | chr1_2:77856479-77856498 | Msa0094580:intron | 35.0% |
| TAAATGGAACCGGGAAAAAA+AGG | - | chr1_2:77856622-77856641 | Msa0094580:intron | 35.0% | |
| GAACTCTAATAAATCTGGTC+TGG | - | chr1_2:77856652-77856671 | Msa0094580:intron | 35.0% | |
| CAACGATGGATGAAAAACAA+AGG | + | chr1_2:77856698-77856717 | None:intergenic | 35.0% | |
| !! | GTAAGTGTATTGATTACAGG+TGG | - | chr1_2:77856828-77856847 | Msa0094580:intron | 35.0% |
| ! | TTTCATTAGTAGTGGGAGAT+TGG | + | chr1_2:77856894-77856913 | None:intergenic | 35.0% |
| AGCAAAGATGGCTTCTATAA+AGG | - | chr1_2:77857093-77857112 | Msa0094580:intron | 35.0% | |
| AAACAGGATTCTAAATGCCT+TGG | + | chr1_2:77857378-77857397 | None:intergenic | 35.0% | |
| ! | TATAAGTCCATGTCTTTTGG+TGG | - | chr1_2:77857563-77857582 | Msa0094580:CDS | 35.0% |
| ! | ATAAGTCCATGTCTTTTGGT+GGG | - | chr1_2:77857564-77857583 | Msa0094580:CDS | 35.0% |
| TCTCTCCTTTAACAAATCCA+CGG | - | chr1_2:77857622-77857641 | Msa0094580:intron | 35.0% | |
| !! | AAAAGCCGTGGATTTGTTAA+AGG | + | chr1_2:77857630-77857649 | None:intergenic | 35.0% |
| AAGAAAGAAGAAAAAAGCCG+TGG | + | chr1_2:77857642-77857661 | None:intergenic | 35.0% | |
| TTACTGCAGCAGTACATATT+AGG | + | chr1_2:77857847-77857866 | None:intergenic | 35.0% | |
| CATAAAATACATACCTCAGC+CGG | + | chr1_2:77857906-77857925 | None:intergenic | 35.0% | |
| !!! | TCTGTTTCATGTTTTGGGTT+GGG | - | chr1_2:77857936-77857955 | Msa0094580:CDS | 35.0% |
| !! | CCATGCAACAATTTTGTTTG+AGG | + | chr1_2:77858082-77858101 | None:intergenic | 35.0% |
| CCTCAAACAAAATTGTTGCA+TGG | - | chr1_2:77858079-77858098 | Msa0094580:intron | 35.0% | |
| TAAGAAACCCAAACTCAGAT+AGG | + | chr1_2:77858110-77858129 | None:intergenic | 35.0% | |
| AGAGTGCAACTTTCAAAAGA+AGG | - | chr1_2:77858319-77858338 | Msa0094580:intron | 35.0% | |
| AAATGAGTTGTTCCCACAAT+AGG | + | chr1_2:77858473-77858492 | None:intergenic | 35.0% | |
| !! | AGATACAACTGGTTTGTACT+AGG | - | chr1_2:77858520-77858539 | Msa0094580:intron | 35.0% |
| AGTGTTGTGTAGTTAAATGC+CGG | + | chr1_2:77858738-77858757 | None:intergenic | 35.0% | |
| GTATCATCGCATGATCATAT+TGG | - | chr1_2:77858795-77858814 | Msa0094580:CDS | 35.0% | |
| AATATCACAACACAGGCATA+AGG | + | chr1_2:77858914-77858933 | None:intergenic | 35.0% | |
| !! | TAACTATATTGGCTCTGTAG+TGG | - | chr1_2:77859012-77859031 | Msa0094580:intron | 35.0% |
| ! | GACAAGCAAGATTAGTTACA+TGG | + | chr1_2:77859056-77859075 | None:intergenic | 35.0% |
| TGTTACATAAGAACTAAGGG+GGG | + | chr1_2:77859091-77859110 | None:intergenic | 35.0% | |
| CTGTTACATAAGAACTAAGG+GGG | + | chr1_2:77859092-77859111 | None:intergenic | 35.0% | |
| CCTGTTACATAAGAACTAAG+GGG | + | chr1_2:77859093-77859112 | None:intergenic | 35.0% | |
| GCCTGTTACATAAGAACTAA+GGG | + | chr1_2:77859094-77859113 | None:intergenic | 35.0% | |
| AAGATCTAAGTCTCCTTCAG+GGG | + | chr1_2:77854346-77854365 | None:intergenic | 40.0% | |
| CTAAGATCTAAGTCTCCTTC+AGG | + | chr1_2:77854348-77854367 | None:intergenic | 40.0% | |
| CTGAAGGAGACTTAGATCTT+AGG | - | chr1_2:77854346-77854365 | Msa0094580:three_prime_UTR | 40.0% | |
| GTGAAAGCAGAATGAGAAGA+TGG | + | chr1_2:77854449-77854468 | None:intergenic | 40.0% | |
| TCTCATTCTGCTTTCACAAC+CGG | - | chr1_2:77854452-77854471 | Msa0094580:CDS | 40.0% | |
| GAGAATAGATCAAGTGAAGC+AGG | + | chr1_2:77854645-77854664 | None:intergenic | 40.0% | |
| TGTGGTAGGTTTCTATAGCA+AGG | - | chr1_2:77854759-77854778 | Msa0094580:intron | 40.0% | |
| CTGCGAATGAACAAAGACAA+CGG | - | chr1_2:77854843-77854862 | Msa0094580:intron | 40.0% | |
| GTCGGATATATCAAGATACG+AGG | - | chr1_2:77854961-77854980 | Msa0094580:intron | 40.0% | |
| GATAGCGACGATAACTAGAA+CGG | - | chr1_2:77855030-77855049 | Msa0094580:intron | 40.0% | |
| !!! | TTGTTTTTGCTCTTTAGCGG+TGG | - | chr1_2:77855171-77855190 | Msa0094580:intron | 40.0% |
| !! | TGTTTTTGCTCTTTAGCGGT+GGG | - | chr1_2:77855172-77855191 | Msa0094580:intron | 40.0% |
| !! | TAGCGGTGGGATTTTTGTTT+TGG | - | chr1_2:77855185-77855204 | Msa0094580:intron | 40.0% |
| !!! | AGCGGTGGGATTTTTGTTTT+GGG | - | chr1_2:77855186-77855205 | Msa0094580:intron | 40.0% |
| !! | TTTTGGGTACAATCTAGTGG+TGG | - | chr1_2:77855202-77855221 | Msa0094580:intron | 40.0% |
| TTGAGAAGCTGCAAAAAGAG+AGG | - | chr1_2:77855298-77855317 | Msa0094580:intron | 40.0% | |
| TGAGAAGCTGCAAAAAGAGA+GGG | - | chr1_2:77855299-77855318 | Msa0094580:intron | 40.0% | |
| AAGAGAGGGATGAATTTCAG+AGG | - | chr1_2:77855313-77855332 | Msa0094580:intron | 40.0% | |
| ! | GAGGATGGTTATTGGTAATC+AGG | - | chr1_2:77855332-77855351 | Msa0094580:intron | 40.0% |
| ! | ATTCGTGCTGCTATATGGTA+GGG | - | chr1_2:77855577-77855596 | Msa0094580:intron | 40.0% |
| !! | GAGACTAAACCAAGTGTTGA+TGG | - | chr1_2:77855681-77855700 | Msa0094580:intron | 40.0% |
| TCTTCTTCTCCATCAACACT+TGG | + | chr1_2:77855693-77855712 | None:intergenic | 40.0% | |
| GATGTGCATAAACAGAAGGA+AGG | - | chr1_2:77855831-77855850 | Msa0094580:intron | 40.0% | |
| ATTGTTGAGATCAATGCAGG+TGG | - | chr1_2:77856058-77856077 | Msa0094580:intron | 40.0% | |
| TTGTTGAGATCAATGCAGGT+GGG | - | chr1_2:77856059-77856078 | Msa0094580:intron | 40.0% | |
| AGCATTAGAGAGAAACTTGG+AGG | - | chr1_2:77856384-77856403 | Msa0094580:CDS | 40.0% | |
| TGGAGGAAAAACCTCATGAA+TGG | - | chr1_2:77856401-77856420 | Msa0094580:intron | 40.0% | |
| AGGAAAAACCTCATGAATGG+TGG | - | chr1_2:77856404-77856423 | Msa0094580:intron | 40.0% | |
| CTCATGAATGGTGGTTGTAT+GGG | - | chr1_2:77856413-77856432 | Msa0094580:intron | 40.0% | |
| ! | AATGGTGGTTGTATGGGTTT+TGG | - | chr1_2:77856419-77856438 | Msa0094580:intron | 40.0% |
| ! | TTGGTGGTTGCATATCTCAT+TGG | - | chr1_2:77856438-77856457 | Msa0094580:intron | 40.0% |
| !! | TTGGTGATGCAAAGTCCAAT+TGG | - | chr1_2:77856574-77856593 | Msa0094580:CDS | 40.0% |
| TGATGCAAAGTCCAATTGGA+CGG | - | chr1_2:77856578-77856597 | Msa0094580:CDS | 40.0% | |
| CTCTAATAAATCTGGTCTGG+TGG | - | chr1_2:77856655-77856674 | Msa0094580:intron | 40.0% | |
| CTGTACTTCCTTCCTTGTAA+AGG | - | chr1_2:77856740-77856759 | Msa0094580:intron | 40.0% | |
| ATAGAACAACGGCCTTTACA+AGG | + | chr1_2:77856755-77856774 | None:intergenic | 40.0% | |
| ! | TTAGTAGTGGGAGATTGGTT+TGG | + | chr1_2:77856889-77856908 | None:intergenic | 40.0% |
| TAATCCTTCACATTCTCCGA+TGG | - | chr1_2:77856924-77856943 | Msa0094580:intron | 40.0% | |
| GAGTTTGACAATGCGAACAA+AGG | + | chr1_2:77856986-77857005 | None:intergenic | 40.0% | |
| TGATCTCTAGCCATGTGAAA+AGG | + | chr1_2:77857055-77857074 | None:intergenic | 40.0% | |
| AGAGAGTCTAAGAGCAAAGA+TGG | - | chr1_2:77857081-77857100 | Msa0094580:intron | 40.0% | |
| ! | TTGAAATATGAAGGAGCGCA+TGG | - | chr1_2:77857204-77857223 | Msa0094580:intron | 40.0% |
| CTTTCTGAGCATCTTGCAAT+TGG | + | chr1_2:77857231-77857250 | None:intergenic | 40.0% | |
| ATTGCAAGATGCTCAGAAAG+AGG | - | chr1_2:77857231-77857250 | Msa0094580:intron | 40.0% | |
| !! | AAGCTCAACTTGTTGAAGCA+AGG | - | chr1_2:77857296-77857315 | Msa0094580:intron | 40.0% |
| !! | AAGGAGCATTATACAAGAGC+AGG | - | chr1_2:77857315-77857334 | Msa0094580:intron | 40.0% |
| TCTCGCAATTGCAACAAGTT+AGG | - | chr1_2:77857351-77857370 | Msa0094580:intron | 40.0% | |
| ATTGCAACAAGTTAGGTCCA+AGG | - | chr1_2:77857358-77857377 | Msa0094580:intron | 40.0% | |
| ! | AGTGCTGGATCATGCTAATT+TGG | - | chr1_2:77857694-77857713 | Msa0094580:intron | 40.0% |
| AACATCTTGCAAAGTCTGAC+AGG | - | chr1_2:77857783-77857802 | Msa0094580:intron | 40.0% | |
| !! | GTCTGTTTCATGTTTTGGGT+TGG | - | chr1_2:77857935-77857954 | Msa0094580:CDS | 40.0% |
| !! | AGTGTGAATTTGTTGGTGGT+TGG | - | chr1_2:77857994-77858013 | Msa0094580:intron | 40.0% |
| !! | GGTTGGTGGAAAAGTATCTT+TGG | - | chr1_2:77858011-77858030 | Msa0094580:intron | 40.0% |
| TGGCTAATCCTATCTGAGTT+TGG | - | chr1_2:77858099-77858118 | Msa0094580:CDS | 40.0% | |
| GGCTAATCCTATCTGAGTTT+GGG | - | chr1_2:77858100-77858119 | Msa0094580:CDS | 40.0% | |
| !! | TGGGAGGTTAGGATTTGTTT+TGG | - | chr1_2:77858222-77858241 | Msa0094580:intron | 40.0% |
| !! | GGGAGGTTAGGATTTGTTTT+GGG | - | chr1_2:77858223-77858242 | Msa0094580:intron | 40.0% |
| !!! | GGAGGTTAGGATTTGTTTTG+GGG | - | chr1_2:77858224-77858243 | Msa0094580:intron | 40.0% |
| !!! | GAGGTTAGGATTTGTTTTGG+GGG | - | chr1_2:77858225-77858244 | Msa0094580:intron | 40.0% |
| !!! | AGTTTTTTTGACAACCGCCA+CGG | + | chr1_2:77858694-77858713 | None:intergenic | 40.0% |
| TATGCAACTAACATGGCTGA+GGG | - | chr1_2:77858957-77858976 | Msa0094580:intron | 40.0% | |
| ! | CCCCTTAGTTCTTATGTAAC+AGG | - | chr1_2:77859090-77859109 | Msa0094580:CDS | 40.0% |
| GGCCTGTTACATAAGAACTA+AGG | + | chr1_2:77859095-77859114 | None:intergenic | 40.0% | |
| TTATGTAACAGGCCATCGTA+TGG | - | chr1_2:77859101-77859120 | Msa0094580:exon | 40.0% | |
| AATGACATTCGACCATACGA+TGG | + | chr1_2:77859116-77859135 | None:intergenic | 40.0% | |
| CTCATTCTGCTTTCACAACC+GGG | - | chr1_2:77854453-77854472 | Msa0094580:CDS | 45.0% | |
| !!! | GATAGGGTTTTGAACTGACC+CGG | + | chr1_2:77854474-77854493 | None:intergenic | 45.0% |
| GATACGAGGCTAAAGTTGAG+AGG | - | chr1_2:77854975-77854994 | Msa0094580:intron | 45.0% | |
| GCTAAAGTTGAGAGGCTTGA+TGG | - | chr1_2:77854983-77855002 | Msa0094580:intron | 45.0% | |
| GAGGGATGAATTTCAGAGGA+TGG | - | chr1_2:77855317-77855336 | Msa0094580:intron | 45.0% | |
| !! | GATCGGTGCTAAAGCAAGTT+AGG | - | chr1_2:77855452-77855471 | Msa0094580:intron | 45.0% |
| ! | TGGTGATTCGTGCTGCTATA+TGG | - | chr1_2:77855572-77855591 | Msa0094580:intron | 45.0% |
| ! | GATTCGTGCTGCTATATGGT+AGG | - | chr1_2:77855576-77855595 | Msa0094580:intron | 45.0% |
| ! | GGCTGGTACATTTTACTTGC+AGG | - | chr1_2:77855657-77855676 | Msa0094580:CDS | 45.0% |
| TGCATAAACAGAAGGAAGGG+AGG | - | chr1_2:77855835-77855854 | Msa0094580:intron | 45.0% | |
| ATGAAAGGTGGACGCTTATG+AGG | - | chr1_2:77855992-77856011 | Msa0094580:intron | 45.0% | |
| GGCATTGTTGAGATCAATGC+AGG | - | chr1_2:77856055-77856074 | Msa0094580:intron | 45.0% | |
| CCATACAACCACCATTCATG+AGG | + | chr1_2:77856415-77856434 | None:intergenic | 45.0% | |
| CCTCATGAATGGTGGTTGTA+TGG | - | chr1_2:77856412-77856431 | Msa0094580:intron | 45.0% | |
| GTGGTTGCATATCTCATTGG+AGG | - | chr1_2:77856441-77856460 | Msa0094580:intron | 45.0% | |
| AAGTCCAATTGGACGGAGAT+TGG | - | chr1_2:77856585-77856604 | Msa0094580:CDS | 45.0% | |
| AACAACGGCCTTTACAAGGA+AGG | + | chr1_2:77856751-77856770 | None:intergenic | 45.0% | |
| !! | TTGAGTACCCTGCTTTAGAG+GGG | + | chr1_2:77856791-77856810 | None:intergenic | 45.0% |
| ! | GTTGAGTACCCTGCTTTAGA+GGG | + | chr1_2:77856792-77856811 | None:intergenic | 45.0% |
| !! | GATTGGTTTGGTAGTCCGTT+AGG | + | chr1_2:77856877-77856896 | None:intergenic | 45.0% |
| TTCTCCGATGGTTGGAAGAA+CGG | - | chr1_2:77856936-77856955 | Msa0094580:intron | 45.0% | |
| CATACCGTTCTTCCAACCAT+CGG | + | chr1_2:77856943-77856962 | None:intergenic | 45.0% | |
| GAAAGAGGCAGAAGTCACTT+CGG | - | chr1_2:77857246-77857265 | Msa0094580:intron | 45.0% | |
| ! | ATTTTACAGGGAATCGGCAC+CGG | - | chr1_2:77857884-77857903 | Msa0094580:intron | 45.0% |
| !! | GTGAATTTGTTGGTGGTTGG+TGG | - | chr1_2:77857997-77858016 | Msa0094580:intron | 45.0% |
| TCGATTACGCGCATGCAAAT+GGG | - | chr1_2:77858203-77858222 | Msa0094580:intron | 45.0% | |
| !! | ATCCACTGGCTTTCCTATTG+TGG | - | chr1_2:77858457-77858476 | Msa0094580:CDS | 45.0% |
| !! | TCCACTGGCTTTCCTATTGT+GGG | - | chr1_2:77858458-77858477 | Msa0094580:CDS | 45.0% |
| CTATCAACACCACAGAGACA+CGG | + | chr1_2:77858640-77858659 | None:intergenic | 45.0% | |
| !! | GTGTCTCTGTGGTGTTGATA+GGG | - | chr1_2:77858639-77858658 | Msa0094580:CDS | 45.0% |
| !! | TGTCTCTGTGGTGTTGATAG+GGG | - | chr1_2:77858640-77858659 | Msa0094580:CDS | 45.0% |
| TAGTTAAATGCCGGTCATGG+CGG | + | chr1_2:77858729-77858748 | None:intergenic | 45.0% | |
| GTGTAGTTAAATGCCGGTCA+TGG | + | chr1_2:77858732-77858751 | None:intergenic | 45.0% | |
| CAGGCATAAGGTGACCAATT+GGG | + | chr1_2:77858902-77858921 | None:intergenic | 45.0% | |
| ACAGGCATAAGGTGACCAAT+TGG | + | chr1_2:77858903-77858922 | None:intergenic | 45.0% | |
| ! | CAGGGAGTATGCAACTAACA+TGG | - | chr1_2:77858950-77858969 | Msa0094580:intron | 45.0% |
| GTATGCAACTAACATGGCTG+AGG | - | chr1_2:77858956-77858975 | Msa0094580:intron | 45.0% | |
| !! | GATCTTGGAAGTGCTTCTAG+AGG | - | chr1_2:77859176-77859195 | Msa0094580:five_prime_UTR | 45.0% |
| !! | TTATTTATTATAATAATGAA+AGG | - | chr1_2:77855977-77855996 | Msa0094580:intron | 5.0% |
| ACAACAATGCCTTCCCCTGA+AGG | - | chr1_2:77854330-77854349 | Msa0094580:three_prime_UTR | 50.0% | |
| TCTAAGTCTCCTTCAGGGGA+AGG | + | chr1_2:77854342-77854361 | None:intergenic | 50.0% | |
| CGACGATAACTAGAACGGTG+AGG | - | chr1_2:77855035-77855054 | Msa0094580:intron | 50.0% | |
| GAAAGAATCTAGGTCGGGCA+TGG | - | chr1_2:77855711-77855730 | Msa0094580:intron | 50.0% | |
| AGGCAACGTGGAACATGGAA+TGG | - | chr1_2:77855855-77855874 | Msa0094580:intron | 50.0% | |
| GGCAACGTGGAACATGGAAT+GGG | - | chr1_2:77855856-77855875 | Msa0094580:intron | 50.0% | |
| !! | GGTGGTTGTATGGGTTTTGG+TGG | - | chr1_2:77856422-77856441 | Msa0094580:intron | 50.0% |
| !! | TGTTGGTGGTTGTTGCTGAC+TGG | - | chr1_2:77856493-77856512 | Msa0094580:intron | 50.0% |
| CCATCCAATCTCCGTCCAAT+TGG | + | chr1_2:77856592-77856611 | None:intergenic | 50.0% | |
| CCAATTGGACGGAGATTGGA+TGG | - | chr1_2:77856589-77856608 | Msa0094580:intron | 50.0% | |
| !! | TGAGTACCCTGCTTTAGAGG+GGG | + | chr1_2:77856790-77856809 | None:intergenic | 50.0% |
| GGTTGAGTACCCTGCTTTAG+AGG | + | chr1_2:77856793-77856812 | None:intergenic | 50.0% | |
| CCAACCATCGGAGAATGTGA+AGG | + | chr1_2:77856931-77856950 | None:intergenic | 50.0% | |
| CCTTCACATTCTCCGATGGT+TGG | - | chr1_2:77856928-77856947 | Msa0094580:intron | 50.0% | |
| CGATGGTTGGAAGAACGGTA+TGG | - | chr1_2:77856941-77856960 | Msa0094580:intron | 50.0% | |
| !! | GCACTGAGCAAAGTACTGTC+AGG | + | chr1_2:77857679-77857698 | None:intergenic | 50.0% |
| GACAGTACTTTGCTCAGTGC+TGG | - | chr1_2:77857679-77857698 | Msa0094580:intron | 50.0% | |
| TTGCAAAGTCTGACAGGCCA+AGG | - | chr1_2:77857789-77857808 | Msa0094580:intron | 50.0% | |
| GTCGATTACGCGCATGCAAA+TGG | - | chr1_2:77858202-77858221 | Msa0094580:intron | 50.0% | |
| ATTACGCGCATGCAAATGGG+AGG | - | chr1_2:77858206-77858225 | Msa0094580:intron | 50.0% | |
| !!! | TGTTTTGGGGGTCTTACTCC+TGG | - | chr1_2:77858237-77858256 | Msa0094580:intron | 50.0% |
| TCCCACAATAGGAAAGCCAG+TGG | + | chr1_2:77858462-77858481 | None:intergenic | 50.0% | |
| ATTCCTCTGCTAGCAGCAGA+AGG | - | chr1_2:77858588-77858607 | Msa0094580:CDS | 50.0% | |
| TTCCTCTGCTAGCAGCAGAA+GGG | - | chr1_2:77858589-77858608 | Msa0094580:CDS | 50.0% | |
| !! | CGTGTCTCTGTGGTGTTGAT+AGG | - | chr1_2:77858638-77858657 | Msa0094580:CDS | 50.0% |
| !! | TAACATGGCTGAGGGTACTC+AGG | - | chr1_2:77858965-77858984 | Msa0094580:intron | 50.0% |
| AAGGGAGGCAACGTGGAACA+TGG | - | chr1_2:77855850-77855869 | Msa0094580:intron | 55.0% | |
| !! | GAGTACCCTGCTTTAGAGGG+GGG | + | chr1_2:77856789-77856808 | None:intergenic | 55.0% |
| GCTGCACCCACCAAAAGACA+TGG | + | chr1_2:77857573-77857592 | None:intergenic | 55.0% | |
| GCGCATGCAAATGGGAGGTT+AGG | - | chr1_2:77858211-77858230 | Msa0094580:intron | 55.0% | |
| TCCTCTGCTAGCAGCAGAAG+GGG | - | chr1_2:77858590-77858609 | Msa0094580:CDS | 55.0% | |
| TGACATGGTCCGTGTCTCTG+TGG | - | chr1_2:77858628-77858647 | Msa0094580:CDS | 55.0% | |
| !! | CTCTGTGGTGTTGATAGGGG+TGG | - | chr1_2:77858643-77858662 | Msa0094580:CDS | 55.0% |
| CACACCATTTCCGCCATGAC+CGG | - | chr1_2:77858716-77858735 | Msa0094580:intron | 55.0% | |
| ! | AATGCCGGTCATGGCGGAAA+TGG | + | chr1_2:77858723-77858742 | None:intergenic | 55.0% |
| CTAAGGGGGGCAGTGAAGAA+TGG | + | chr1_2:77859078-77859097 | None:intergenic | 55.0% | |
| CAGAAGGAAGGGAGGCAACG+TGG | - | chr1_2:77855843-77855862 | Msa0094580:intron | 60.0% | |
| !! | TACCCACCCCCCTCTAAAGC+AGG | - | chr1_2:77856780-77856799 | Msa0094580:intron | 60.0% |
| !! | ACCCACCCCCCTCTAAAGCA+GGG | - | chr1_2:77856781-77856800 | Msa0094580:intron | 60.0% |
| !! | ACCCTGCTTTAGAGGGGGGT+GGG | + | chr1_2:77856785-77856804 | None:intergenic | 60.0% |
| !! | TACCCTGCTTTAGAGGGGGG+TGG | + | chr1_2:77856786-77856805 | None:intergenic | 60.0% |
| ACCCCTTCTGCTGCTAGCAG+AGG | + | chr1_2:77858594-77858613 | None:intergenic | 60.0% | |
| !! | GGTGTTGATAGGGGTGGTGC+TGG | - | chr1_2:77858649-77858668 | Msa0094580:CDS | 60.0% |
| ! | CGGTCATGGCGGAAATGGTG+TGG | + | chr1_2:77858718-77858737 | None:intergenic | 60.0% |
| !! | CAGGGAATCGGCACCGGCTG+AGG | - | chr1_2:77857890-77857909 | Msa0094580:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 77854180 | 77859271 | 77854180 | ID=Msa0094580;Name=Msa0094580 |
| chr1_2 | mRNA | 77854180 | 77859271 | 77854180 | ID=Msa0094580-mRNA-1;Parent=Msa0094580;Name=Msa0094580-mRNA-1;_AED=0.26;_eAED=0.26;_QI=156|0.87|0.94|1|0.87|0.94|17|267|407 |
| chr1_2 | exon | 77854180 | 77854498 | 77854180 | ID=Msa0094580-mRNA-1:exon:27689;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77855224 | 77855282 | 77855224 | ID=Msa0094580-mRNA-1:exon:27688;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77855540 | 77855558 | 77855540 | ID=Msa0094580-mRNA-1:exon:27687;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77855641 | 77855684 | 77855641 | ID=Msa0094580-mRNA-1:exon:27686;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77856115 | 77856234 | 77856115 | ID=Msa0094580-mRNA-1:exon:27685;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77856337 | 77856414 | 77856337 | ID=Msa0094580-mRNA-1:exon:27684;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77856494 | 77856604 | 77856494 | ID=Msa0094580-mRNA-1:exon:27683;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77857375 | 77857452 | 77857375 | ID=Msa0094580-mRNA-1:exon:27682;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77857540 | 77857605 | 77857540 | ID=Msa0094580-mRNA-1:exon:27681;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77857698 | 77857772 | 77857698 | ID=Msa0094580-mRNA-1:exon:27680;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77857923 | 77857985 | 77857923 | ID=Msa0094580-mRNA-1:exon:27679;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77858098 | 77858187 | 77858098 | ID=Msa0094580-mRNA-1:exon:27678;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77858400 | 77858496 | 77858400 | ID=Msa0094580-mRNA-1:exon:27677;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77858587 | 77858684 | 77858587 | ID=Msa0094580-mRNA-1:exon:27676;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77858777 | 77858888 | 77858777 | ID=Msa0094580-mRNA-1:exon:27675;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77858977 | 77859005 | 77858977 | ID=Msa0094580-mRNA-1:exon:27674;Parent=Msa0094580-mRNA-1 |
| chr1_2 | exon | 77859083 | 77859271 | 77859083 | ID=Msa0094580-mRNA-1:exon:27673;Parent=Msa0094580-mRNA-1 |
| chr1_2 | five_prime_UTR | 77859116 | 77859271 | 77859116 | ID=Msa0094580-mRNA-1:five_prime_utr;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77859083 | 77859115 | 77859083 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77858977 | 77859005 | 77858977 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77858777 | 77858888 | 77858777 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77858587 | 77858684 | 77858587 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77858400 | 77858496 | 77858400 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77858098 | 77858187 | 77858098 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77857923 | 77857985 | 77857923 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77857698 | 77857772 | 77857698 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77857540 | 77857605 | 77857540 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77857375 | 77857452 | 77857375 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77856494 | 77856604 | 77856494 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77856337 | 77856414 | 77856337 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77856115 | 77856234 | 77856115 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77855641 | 77855684 | 77855641 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77855540 | 77855558 | 77855540 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77855224 | 77855282 | 77855224 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | CDS | 77854447 | 77854498 | 77854447 | ID=Msa0094580-mRNA-1:cds;Parent=Msa0094580-mRNA-1 |
| chr1_2 | three_prime_UTR | 77854180 | 77854446 | 77854180 | ID=Msa0094580-mRNA-1:three_prime_utr;Parent=Msa0094580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
