Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519130 | XP_003602734.1 | 95.556 | 495 | 10 | 1 | 1 | 495 | 1 | 483 | 0.0 | 980 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519130 | sp|Q9FI43|MAPC2_ARATH | 69.325 | 489 | 131 | 4 | 9 | 495 | 16 | 487 | 0.0 | 701 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519130 | G7J2S0 | 95.556 | 495 | 10 | 1 | 1 | 495 | 1 | 483 | 0.0 | 980 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004060 | Msa0519130 | 0.810868 | 9.307390e-51 | -8.615850e-47 |
Msa0031820 | Msa0519130 | 0.809466 | 1.866319e-50 | -8.615850e-47 |
Msa0057610 | Msa0519130 | 0.807068 | 6.053238e-50 | -8.615850e-47 |
Msa0094580 | Msa0519130 | 0.819277 | 1.263513e-52 | -8.615850e-47 |
Msa0101880 | Msa0519130 | 0.842827 | 2.038526e-58 | -8.615850e-47 |
Msa0118000 | Msa0519130 | 0.800536 | 1.376393e-48 | -8.615850e-47 |
Msa0145070 | Msa0519130 | 0.802312 | 5.955251e-49 | -8.615850e-47 |
Msa0165440 | Msa0519130 | 0.811024 | 8.610102e-51 | -8.615850e-47 |
Msa0171850 | Msa0519130 | 0.805043 | 1.615250e-49 | -8.615850e-47 |
Msa0188890 | Msa0519130 | 0.805197 | 1.499525e-49 | -8.615850e-47 |
Msa0208810 | Msa0519130 | 0.816875 | 4.412916e-52 | -8.615850e-47 |
Msa0231380 | Msa0519130 | 0.808710 | 2.710014e-50 | -8.615850e-47 |
Msa0416400 | Msa0519130 | 0.816034 | 6.808752e-52 | -8.615850e-47 |
Msa0428050 | Msa0519130 | 0.801844 | 7.433414e-49 | -8.615850e-47 |
Msa0428240 | Msa0519130 | 0.949131 | 2.365147e-107 | -8.615850e-47 |
Msa0431770 | Msa0519130 | 0.809123 | 2.210656e-50 | -8.615850e-47 |
Msa0437510 | Msa0519130 | 0.804998 | 1.650479e-49 | -8.615850e-47 |
Msa0462990 | Msa0519130 | 0.806482 | 8.052359e-50 | -8.615850e-47 |
Msa0474390 | Msa0519130 | 0.803501 | 3.382659e-49 | -8.615850e-47 |
Msa0474590 | Msa0519130 | 0.869372 | 3.253625e-66 | -8.615850e-47 |
Msa0481460 | Msa0519130 | 0.804462 | 2.135043e-49 | -8.615850e-47 |
Msa0270660 | Msa0519130 | 0.806454 | 8.162814e-50 | -8.615850e-47 |
Msa0277450 | Msa0519130 | 0.807724 | 4.395114e-50 | -8.615850e-47 |
Msa0313740 | Msa0519130 | 0.810387 | 1.182208e-50 | -8.615850e-47 |
Msa0490750 | Msa0519130 | 0.802756 | 4.824701e-49 | -8.615850e-47 |
Msa0517090 | Msa0519130 | 0.800080 | 1.704266e-48 | -8.615850e-47 |
Msa0519130 | Msa0542160 | 0.806753 | 7.058179e-50 | -8.615850e-47 |
Msa0519130 | Msa0556010 | 0.804194 | 2.428643e-49 | -8.615850e-47 |
Msa0519130 | Msa0578090 | 0.837598 | 4.730686e-57 | -8.615850e-47 |
Msa0519130 | Msa0581690 | 0.806177 | 9.337436e-50 | -8.615850e-47 |
Msa0519130 | Msa0586850 | 0.826701 | 2.348394e-54 | -8.615850e-47 |
Msa0519130 | Msa0626680 | 0.825290 | 5.080118e-54 | -8.615850e-47 |
Msa0519130 | Msa0664760 | 0.825228 | 5.255370e-54 | -8.615850e-47 |
Msa0519130 | Msa0679700 | 0.815483 | 9.034293e-52 | -8.615850e-47 |
Msa0519130 | Msa0716410 | 0.821206 | 4.567421e-53 | -8.615850e-47 |
Msa0519130 | Msa0745200 | 0.805337 | 1.401760e-49 | -8.615850e-47 |
Msa0519130 | Msa0790610 | 0.808989 | 2.361408e-50 | -8.615850e-47 |
Msa0519130 | Msa0799000 | 0.822562 | 2.216365e-53 | -8.615850e-47 |
Msa0519130 | Msa0825280 | 0.801900 | 7.239844e-49 | -8.615850e-47 |
Msa0519130 | Msa0947530 | -0.839520 | 1.508450e-57 | -8.615850e-47 |
Msa0519130 | Msa1004420 | 0.817093 | 3.942954e-52 | -8.615850e-47 |
Msa0519130 | Msa1040840 | 0.836564 | 8.689768e-57 | -8.615850e-47 |
Msa0519130 | Msa1041520 | 0.807120 | 5.903170e-50 | -8.615850e-47 |
Msa0519130 | Msa1118940 | 0.821164 | 4.670853e-53 | -8.615850e-47 |
Msa0519130 | Msa1127190 | 0.801553 | 8.529714e-49 | -8.615850e-47 |
Msa0519130 | Msa1171830 | 0.802212 | 6.244686e-49 | -8.615850e-47 |
Msa0519130 | Msa1172640 | 0.808996 | 2.353949e-50 | -8.615850e-47 |
Msa0519130 | Msa1208890 | -0.821971 | 3.039943e-53 | -8.615850e-47 |
Msa0519130 | Msa1223330 | 0.803631 | 3.178512e-49 | -8.615850e-47 |
Msa0519130 | Msa1245940 | -0.808118 | 3.624532e-50 | -8.615850e-47 |
Msa0519130 | Msa1259070 | -0.809621 | 1.728689e-50 | -8.615850e-47 |
Msa0519130 | Msa1265440 | 0.803143 | 4.011885e-49 | -8.615850e-47 |
Msa0519130 | Msa1269580 | -0.810505 | 1.114950e-50 | -8.615850e-47 |
Msa0519130 | Msa1294960 | 0.832150 | 1.113812e-55 | -8.615850e-47 |
Msa0519130 | Msa1304860 | 0.802655 | 5.061671e-49 | -8.615850e-47 |
Msa0519130 | Msa1317810 | -0.819203 | 1.313994e-52 | -8.615850e-47 |
Msa0519130 | Msa1338830 | 0.826771 | 2.258826e-54 | -8.615850e-47 |
Msa0519130 | Msa1370620 | 0.836889 | 7.183179e-57 | -8.615850e-47 |
Msa0519130 | Msa1386710 | 0.813275 | 2.779471e-51 | -8.615850e-47 |
Msa0519130 | Msa1398860 | 0.804135 | 2.497765e-49 | -8.615850e-47 |
Msa0519130 | Msa1400610 | -0.821467 | 3.975354e-53 | -8.615850e-47 |
Msa0519130 | Msa1415940 | 0.806616 | 7.545578e-50 | -8.615850e-47 |
Msa0519130 | Msa1432920 | 0.806897 | 6.581159e-50 | -8.615850e-47 |
Msa0519130 | Msa1466090 | 0.804038 | 2.616367e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519130 | MtrunA17_Chr3g0131501 | 95.556 | 495 | 10 | 1 | 1 | 495 | 1 | 483 | 0.0 | 980 |
Msa0519130 | MtrunA17_Chr8g0385571 | 77.710 | 489 | 97 | 1 | 7 | 495 | 29 | 505 | 0.0 | 797 |
Msa0519130 | MtrunA17_Chr7g0252401 | 67.689 | 489 | 139 | 3 | 9 | 495 | 11 | 482 | 0.0 | 696 |
Msa0519130 | MtrunA17_Chr8g0347451 | 40.777 | 309 | 154 | 8 | 215 | 495 | 49 | 356 | 1.51e-67 | 221 |
Msa0519130 | MtrunA17_Chr5g0396801 | 42.020 | 307 | 151 | 8 | 215 | 495 | 36 | 341 | 6.78e-66 | 216 |
Msa0519130 | MtrunA17_Chr3g0137941 | 36.331 | 278 | 173 | 3 | 215 | 492 | 120 | 393 | 5.67e-53 | 184 |
Msa0519130 | MtrunA17_Chr1g0149111 | 36.331 | 278 | 173 | 2 | 215 | 492 | 137 | 410 | 4.81e-52 | 182 |
Msa0519130 | MtrunA17_Chr1g0149111 | 30.939 | 181 | 122 | 3 | 214 | 392 | 230 | 409 | 1.99e-17 | 84.3 |
Msa0519130 | MtrunA17_Chr4g0063561 | 36.201 | 279 | 172 | 4 | 215 | 492 | 121 | 394 | 6.46e-50 | 176 |
Msa0519130 | MtrunA17_Chr6g0488081 | 32.432 | 296 | 178 | 6 | 214 | 492 | 16 | 306 | 2.02e-45 | 161 |
Msa0519130 | MtrunA17_Chr7g0240341 | 30.696 | 316 | 192 | 8 | 198 | 493 | 7 | 315 | 2.68e-45 | 161 |
Msa0519130 | MtrunA17_Chr7g0240341 | 29.130 | 230 | 143 | 7 | 177 | 396 | 98 | 317 | 6.64e-22 | 96.3 |
Msa0519130 | MtrunA17_Chr3g0135861 | 30.945 | 307 | 177 | 7 | 215 | 494 | 33 | 331 | 2.50e-44 | 159 |
Msa0519130 | MtrunA17_Chr3g0135861 | 27.184 | 206 | 122 | 5 | 311 | 495 | 35 | 233 | 7.54e-16 | 79.0 |
Msa0519130 | MtrunA17_Chr2g0296061 | 31.475 | 305 | 169 | 6 | 219 | 486 | 17 | 318 | 3.24e-41 | 150 |
Msa0519130 | MtrunA17_Chr2g0296061 | 29.381 | 194 | 118 | 4 | 313 | 490 | 17 | 207 | 1.07e-19 | 90.1 |
Msa0519130 | MtrunA17_Chr2g0296061 | 24.638 | 207 | 128 | 7 | 210 | 391 | 119 | 322 | 2.33e-11 | 65.1 |
Msa0519130 | MtrunA17_Chr5g0436041 | 33.788 | 293 | 172 | 9 | 217 | 492 | 34 | 321 | 3.64e-41 | 150 |
Msa0519130 | MtrunA17_Chr5g0436041 | 29.958 | 237 | 141 | 7 | 169 | 390 | 92 | 318 | 5.48e-19 | 88.2 |
Msa0519130 | MtrunA17_Chr5g0436041 | 32.663 | 199 | 115 | 5 | 304 | 489 | 27 | 219 | 1.12e-14 | 75.1 |
Msa0519130 | MtrunA17_Chr4g0006851 | 31.579 | 304 | 175 | 8 | 197 | 490 | 76 | 356 | 1.67e-39 | 147 |
Msa0519130 | MtrunA17_Chr4g0006851 | 27.841 | 176 | 114 | 3 | 322 | 492 | 100 | 267 | 1.53e-13 | 72.0 |
Msa0519130 | MtrunA17_Chr7g0242311 | 31.502 | 273 | 161 | 7 | 228 | 490 | 98 | 354 | 2.95e-38 | 143 |
Msa0519130 | MtrunA17_Chr7g0242311 | 29.545 | 176 | 111 | 4 | 322 | 492 | 98 | 265 | 2.29e-17 | 84.0 |
Msa0519130 | MtrunA17_Chr7g0242311 | 24.713 | 174 | 124 | 2 | 219 | 392 | 189 | 355 | 3.23e-14 | 74.3 |
Msa0519130 | MtrunA17_Chr4g0067231 | 28.662 | 314 | 182 | 6 | 219 | 493 | 16 | 326 | 2.03e-37 | 140 |
Msa0519130 | MtrunA17_Chr4g0067231 | 23.671 | 207 | 130 | 6 | 210 | 391 | 120 | 323 | 1.69e-11 | 65.5 |
Msa0519130 | MtrunA17_Chr7g0269701 | 30.928 | 291 | 176 | 7 | 219 | 492 | 24 | 306 | 5.00e-36 | 136 |
Msa0519130 | MtrunA17_Chr1g0195101 | 31.673 | 281 | 167 | 6 | 229 | 492 | 31 | 303 | 2.46e-34 | 131 |
Msa0519130 | MtrunA17_Chr3g0115801 | 31.908 | 304 | 179 | 8 | 212 | 495 | 111 | 406 | 2.53e-32 | 127 |
Msa0519130 | MtrunA17_Chr8g0382201 | 32.808 | 317 | 177 | 12 | 205 | 495 | 179 | 485 | 8.02e-32 | 127 |
Msa0519130 | MtrunA17_Chr3g0135801 | 26.367 | 311 | 193 | 8 | 208 | 494 | 25 | 323 | 8.70e-30 | 119 |
Msa0519130 | MtrunA17_Chr4g0000261 | 28.571 | 301 | 183 | 8 | 217 | 495 | 66 | 356 | 1.87e-29 | 119 |
Msa0519130 | MtrunA17_Chr5g0423111 | 32.734 | 278 | 168 | 10 | 229 | 492 | 33 | 305 | 5.03e-29 | 117 |
Msa0519130 | MtrunA17_Chr6g0488341 | 28.862 | 246 | 151 | 6 | 253 | 492 | 4 | 231 | 1.72e-28 | 113 |
Msa0519130 | MtrunA17_Chr4g0004571 | 26.389 | 288 | 201 | 6 | 204 | 486 | 5 | 286 | 2.12e-26 | 108 |
Msa0519130 | MtrunA17_Chr3g0086811 | 28.221 | 326 | 191 | 9 | 204 | 493 | 14 | 332 | 3.76e-26 | 109 |
Msa0519130 | MtrunA17_Chr8g0372531 | 29.537 | 281 | 176 | 7 | 233 | 494 | 30 | 307 | 2.88e-24 | 103 |
Msa0519130 | MtrunA17_Chr8g0372531 | 27.326 | 172 | 118 | 4 | 325 | 492 | 28 | 196 | 4.06e-16 | 79.3 |
Msa0519130 | MtrunA17_Chr6g0463041 | 28.182 | 220 | 116 | 4 | 311 | 492 | 25 | 240 | 4.00e-24 | 101 |
Msa0519130 | MtrunA17_Chr6g0463041 | 28.472 | 144 | 92 | 4 | 253 | 391 | 101 | 238 | 1.62e-11 | 64.7 |
Msa0519130 | MtrunA17_Chr8g0393031 | 26.596 | 282 | 187 | 6 | 215 | 480 | 16 | 293 | 4.23e-24 | 102 |
Msa0519130 | MtrunA17_Chr5g0431531 | 27.972 | 286 | 184 | 8 | 215 | 489 | 37 | 311 | 3.93e-22 | 97.1 |
Msa0519130 | MtrunA17_Chr5g0431531 | 29.891 | 184 | 119 | 4 | 311 | 493 | 39 | 213 | 1.26e-19 | 89.7 |
Msa0519130 | MtrunA17_Chr1g0200171 | 20.734 | 463 | 326 | 11 | 35 | 493 | 360 | 785 | 4.45e-22 | 100 |
Msa0519130 | MtrunA17_Chr3g0088301 | 27.907 | 301 | 184 | 10 | 204 | 480 | 77 | 368 | 2.43e-19 | 89.7 |
Msa0519130 | MtrunA17_Chr8g0386871 | 26.027 | 292 | 190 | 8 | 213 | 495 | 316 | 590 | 2.58e-19 | 91.3 |
Msa0519130 | MtrunA17_Chr2g0331771 | 26.481 | 287 | 203 | 4 | 212 | 493 | 151 | 434 | 3.77e-19 | 89.7 |
Msa0519130 | MtrunA17_Chr5g0411411 | 27.815 | 302 | 185 | 10 | 214 | 492 | 6 | 297 | 1.52e-18 | 86.3 |
Msa0519130 | MtrunA17_Chr1g0201361 | 26.259 | 278 | 177 | 7 | 218 | 492 | 52 | 304 | 1.67e-18 | 86.3 |
Msa0519130 | MtrunA17_Chr8g0366791 | 26.797 | 306 | 183 | 7 | 214 | 492 | 6 | 297 | 1.80e-18 | 85.9 |
Msa0519130 | MtrunA17_Chr8g0352031 | 26.690 | 281 | 185 | 6 | 217 | 480 | 68 | 344 | 6.03e-18 | 85.5 |
Msa0519130 | MtrunA17_Chr5g0436571 | 26.792 | 265 | 158 | 9 | 257 | 488 | 54 | 315 | 8.79e-18 | 84.7 |
Msa0519130 | MtrunA17_Chr8g0383321 | 26.619 | 278 | 176 | 6 | 218 | 492 | 53 | 305 | 3.52e-17 | 82.4 |
Msa0519130 | MtrunA17_Chr8g0383321 | 30.556 | 180 | 100 | 6 | 311 | 489 | 52 | 207 | 1.68e-14 | 74.7 |
Msa0519130 | MtrunA17_Chr4g0028531 | 24.742 | 291 | 185 | 10 | 218 | 488 | 23 | 299 | 4.54e-17 | 82.0 |
Msa0519130 | MtrunA17_Chr1g0196921 | 28.090 | 178 | 118 | 4 | 300 | 471 | 4 | 177 | 1.89e-16 | 80.1 |
Msa0519130 | MtrunA17_Chr1g0196921 | 23.404 | 282 | 198 | 7 | 222 | 490 | 19 | 295 | 2.70e-16 | 79.7 |
Msa0519130 | MtrunA17_Chr4g0040341 | 28.470 | 281 | 179 | 9 | 217 | 480 | 75 | 350 | 2.39e-16 | 80.9 |
Msa0519130 | MtrunA17_Chr1g0163521 | 27.113 | 284 | 148 | 12 | 265 | 494 | 79 | 357 | 3.23e-16 | 80.1 |
Msa0519130 | MtrunA17_Chr6g0455381 | 24.918 | 305 | 207 | 7 | 204 | 490 | 4 | 304 | 3.85e-16 | 79.3 |
Msa0519130 | MtrunA17_Chr6g0455381 | 24.599 | 187 | 133 | 5 | 311 | 492 | 18 | 201 | 2.60e-11 | 64.7 |
Msa0519130 | MtrunA17_Chr4g0008061 | 26.190 | 294 | 184 | 9 | 217 | 490 | 15 | 295 | 6.02e-16 | 78.6 |
Msa0519130 | MtrunA17_Chr2g0328891 | 28.470 | 281 | 179 | 9 | 217 | 480 | 66 | 341 | 1.72e-15 | 78.2 |
Msa0519130 | MtrunA17_Chr6g0463351 | 24.436 | 266 | 182 | 6 | 233 | 489 | 83 | 338 | 4.55e-15 | 76.6 |
Msa0519130 | MtrunA17_Chr3g0133111 | 24.684 | 316 | 191 | 7 | 215 | 492 | 4 | 310 | 5.80e-15 | 75.9 |
Msa0519130 | MtrunA17_Chr7g0219891 | 25.000 | 308 | 187 | 9 | 212 | 490 | 16 | 308 | 7.53e-15 | 75.5 |
Msa0519130 | MtrunA17_Chr7g0219891 | 28.500 | 200 | 115 | 6 | 218 | 395 | 119 | 312 | 7.03e-12 | 66.6 |
Msa0519130 | MtrunA17_Chr6g0488171 | 33.663 | 101 | 65 | 1 | 394 | 492 | 2 | 102 | 4.08e-14 | 68.6 |
Msa0519130 | MtrunA17_Chr8g0385891 | 26.984 | 252 | 160 | 8 | 219 | 453 | 74 | 318 | 5.45e-14 | 73.2 |
Msa0519130 | MtrunA17_Chr7g0241521 | 24.832 | 298 | 183 | 8 | 217 | 490 | 17 | 297 | 1.02e-13 | 72.0 |
Msa0519130 | MtrunA17_Chr3g0103681 | 25.753 | 299 | 194 | 7 | 210 | 490 | 8 | 296 | 1.51e-13 | 71.2 |
Msa0519130 | MtrunA17_Chr6g0461981 | 26.230 | 244 | 159 | 7 | 218 | 447 | 64 | 300 | 7.34e-13 | 70.1 |
Msa0519130 | MtrunA17_Chr7g0251981 | 29.289 | 239 | 149 | 9 | 219 | 443 | 83 | 315 | 1.13e-12 | 69.3 |
Msa0519130 | MtrunA17_Chr8g0378951 | 22.887 | 284 | 203 | 7 | 215 | 490 | 19 | 294 | 1.16e-12 | 68.6 |
Msa0519130 | MtrunA17_Chr2g0293621 | 23.906 | 297 | 205 | 10 | 212 | 490 | 24 | 317 | 1.18e-12 | 68.9 |
Msa0519130 | MtrunA17_Chr1g0196161 | 28.889 | 180 | 123 | 4 | 317 | 495 | 3 | 178 | 1.99e-12 | 65.9 |
Msa0519130 | MtrunA17_Chr3g0136041 | 23.810 | 336 | 211 | 9 | 196 | 490 | 10 | 341 | 2.17e-12 | 68.6 |
Msa0519130 | MtrunA17_Chr3g0136041 | 33.333 | 156 | 83 | 5 | 261 | 395 | 190 | 345 | 4.86e-12 | 67.4 |
Msa0519130 | MtrunA17_Chr4g0046981 | 27.368 | 190 | 125 | 4 | 312 | 492 | 13 | 198 | 3.65e-12 | 67.4 |
Msa0519130 | MtrunA17_Chr4g0051841 | 22.535 | 284 | 197 | 9 | 217 | 489 | 29 | 300 | 9.12e-12 | 66.2 |
Msa0519130 | MtrunA17_Chr5g0407451 | 23.729 | 177 | 122 | 4 | 312 | 486 | 22 | 187 | 1.99e-11 | 65.1 |
Msa0519130 | MtrunA17_Chr7g0275411 | 22.619 | 252 | 175 | 7 | 259 | 493 | 88 | 336 | 2.87e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519130 | AT5G51050.1 | 69.325 | 489 | 131 | 4 | 9 | 495 | 27 | 498 | 0.0 | 702 |
Msa0519130 | AT5G07320.1 | 68.994 | 487 | 131 | 3 | 9 | 495 | 13 | 479 | 0.0 | 696 |
Msa0519130 | AT5G61810.1 | 66.189 | 488 | 143 | 5 | 9 | 495 | 12 | 478 | 0.0 | 665 |
Msa0519130 | AT5G61810.2 | 69.767 | 344 | 94 | 4 | 153 | 495 | 1 | 335 | 9.73e-176 | 497 |
Msa0519130 | AT4G01100.1 | 40.952 | 315 | 145 | 8 | 215 | 495 | 40 | 347 | 5.41e-70 | 227 |
Msa0519130 | AT4G01100.2 | 39.877 | 326 | 147 | 8 | 215 | 495 | 40 | 361 | 1.32e-68 | 224 |
Msa0519130 | AT4G01100.3 | 40.594 | 303 | 139 | 8 | 227 | 495 | 2 | 297 | 5.66e-66 | 215 |
Msa0519130 | AT4G01100.3 | 26.857 | 175 | 123 | 1 | 320 | 489 | 1 | 175 | 1.79e-19 | 89.4 |
Msa0519130 | AT4G01100.3 | 27.919 | 197 | 119 | 4 | 219 | 392 | 97 | 293 | 4.32e-16 | 79.3 |
Msa0519130 | AT4G32400.1 | 37.413 | 286 | 172 | 5 | 209 | 492 | 105 | 385 | 4.67e-54 | 187 |
Msa0519130 | AT3G53940.1 | 34.114 | 299 | 179 | 7 | 210 | 493 | 66 | 361 | 5.21e-48 | 170 |
Msa0519130 | AT3G55640.1 | 33.444 | 302 | 183 | 7 | 203 | 489 | 24 | 322 | 1.17e-46 | 165 |
Msa0519130 | AT3G55640.4 | 33.444 | 302 | 183 | 7 | 203 | 489 | 24 | 322 | 1.17e-46 | 165 |
Msa0519130 | AT2G37890.1 | 32.432 | 296 | 172 | 7 | 217 | 492 | 45 | 332 | 1.41e-43 | 157 |
Msa0519130 | AT2G37890.1 | 28.261 | 276 | 184 | 7 | 125 | 392 | 62 | 331 | 2.16e-26 | 110 |
Msa0519130 | AT2G37890.1 | 34.694 | 196 | 117 | 4 | 303 | 489 | 37 | 230 | 1.36e-23 | 102 |
Msa0519130 | AT4G26180.1 | 30.435 | 299 | 185 | 6 | 214 | 494 | 18 | 311 | 4.60e-43 | 155 |
Msa0519130 | AT4G26180.1 | 35.149 | 202 | 112 | 4 | 308 | 495 | 18 | 214 | 8.33e-29 | 116 |
Msa0519130 | AT1G14560.1 | 31.010 | 287 | 166 | 8 | 228 | 489 | 38 | 317 | 3.15e-40 | 148 |
Msa0519130 | AT1G14560.1 | 29.474 | 190 | 113 | 4 | 322 | 495 | 38 | 222 | 8.07e-20 | 90.9 |
Msa0519130 | AT4G26180.2 | 29.749 | 279 | 173 | 6 | 214 | 474 | 18 | 291 | 1.98e-37 | 139 |
Msa0519130 | AT4G26180.2 | 35.149 | 202 | 112 | 4 | 308 | 495 | 18 | 214 | 3.66e-29 | 116 |
Msa0519130 | AT5G01500.1 | 31.502 | 273 | 161 | 9 | 228 | 490 | 130 | 386 | 3.04e-36 | 139 |
Msa0519130 | AT5G01500.1 | 30.114 | 176 | 110 | 4 | 322 | 492 | 130 | 297 | 8.81e-17 | 82.8 |
Msa0519130 | AT5G01500.1 | 27.586 | 174 | 119 | 2 | 219 | 392 | 221 | 387 | 5.58e-12 | 68.2 |
Msa0519130 | AT3G21390.1 | 29.545 | 308 | 173 | 6 | 219 | 486 | 21 | 324 | 7.89e-36 | 136 |
Msa0519130 | AT3G21390.1 | 30.729 | 192 | 116 | 5 | 313 | 490 | 21 | 209 | 3.71e-20 | 92.0 |
Msa0519130 | AT3G21390.2 | 29.545 | 308 | 173 | 6 | 219 | 486 | 43 | 346 | 1.12e-35 | 136 |
Msa0519130 | AT3G21390.2 | 30.729 | 192 | 116 | 5 | 313 | 490 | 43 | 231 | 5.28e-20 | 92.0 |
Msa0519130 | AT5G64970.1 | 31.975 | 319 | 177 | 9 | 203 | 495 | 121 | 425 | 9.18e-35 | 135 |
Msa0519130 | AT3G51870.1 | 29.044 | 272 | 169 | 7 | 228 | 490 | 102 | 358 | 1.24e-34 | 134 |
Msa0519130 | AT3G51870.1 | 27.807 | 187 | 125 | 3 | 219 | 402 | 193 | 372 | 9.56e-15 | 76.3 |
Msa0519130 | AT3G51870.1 | 27.933 | 179 | 116 | 4 | 322 | 495 | 102 | 272 | 4.33e-14 | 74.3 |
Msa0519130 | AT5G48970.1 | 28.710 | 310 | 174 | 8 | 219 | 486 | 24 | 328 | 5.52e-34 | 131 |
Msa0519130 | AT5G48970.1 | 30.612 | 196 | 113 | 6 | 313 | 490 | 24 | 214 | 5.91e-20 | 91.7 |
Msa0519130 | AT5G48970.1 | 22.967 | 209 | 132 | 5 | 210 | 391 | 126 | 332 | 1.64e-11 | 66.2 |
Msa0519130 | AT1G14560.2 | 29.779 | 272 | 159 | 8 | 228 | 474 | 38 | 302 | 8.77e-34 | 130 |
Msa0519130 | AT1G14560.2 | 29.474 | 190 | 113 | 4 | 322 | 495 | 38 | 222 | 5.14e-20 | 91.3 |
Msa0519130 | AT5G64970.2 | 32.119 | 302 | 165 | 9 | 220 | 495 | 14 | 301 | 2.23e-32 | 126 |
Msa0519130 | AT1G78180.1 | 31.683 | 303 | 181 | 6 | 212 | 495 | 123 | 418 | 3.00e-30 | 122 |
Msa0519130 | AT3G55640.2 | 31.897 | 232 | 142 | 5 | 203 | 421 | 24 | 252 | 2.99e-29 | 116 |
Msa0519130 | AT3G55640.2 | 28.571 | 203 | 130 | 4 | 299 | 490 | 26 | 224 | 1.08e-18 | 86.3 |
Msa0519130 | AT3G55640.3 | 31.897 | 232 | 142 | 5 | 203 | 421 | 24 | 252 | 2.99e-29 | 116 |
Msa0519130 | AT3G55640.3 | 28.571 | 203 | 130 | 4 | 299 | 490 | 26 | 224 | 1.08e-18 | 86.3 |
Msa0519130 | AT3G53940.2 | 33.333 | 225 | 134 | 5 | 210 | 421 | 66 | 287 | 1.22e-28 | 115 |
Msa0519130 | AT3G53940.2 | 32.367 | 207 | 126 | 5 | 292 | 489 | 57 | 258 | 3.89e-21 | 94.0 |
Msa0519130 | AT3G20240.1 | 27.213 | 305 | 190 | 8 | 210 | 492 | 45 | 339 | 1.59e-28 | 116 |
Msa0519130 | AT5G48970.2 | 28.295 | 258 | 163 | 5 | 250 | 486 | 1 | 257 | 2.44e-28 | 114 |
Msa0519130 | AT5G48970.2 | 31.944 | 144 | 88 | 3 | 352 | 490 | 5 | 143 | 6.63e-16 | 78.2 |
Msa0519130 | AT5G48970.2 | 22.967 | 209 | 132 | 5 | 210 | 391 | 55 | 261 | 2.59e-12 | 67.8 |
Msa0519130 | AT2G47490.1 | 30.072 | 276 | 177 | 5 | 229 | 492 | 29 | 300 | 2.96e-28 | 114 |
Msa0519130 | AT1G74240.1 | 28.852 | 305 | 184 | 6 | 217 | 492 | 36 | 336 | 4.65e-28 | 115 |
Msa0519130 | AT1G74240.1 | 29.126 | 206 | 119 | 4 | 311 | 493 | 36 | 237 | 9.81e-20 | 91.3 |
Msa0519130 | AT1G14560.3 | 32.663 | 199 | 110 | 5 | 311 | 489 | 25 | 219 | 5.38e-28 | 112 |
Msa0519130 | AT1G14560.3 | 27.500 | 200 | 116 | 5 | 217 | 391 | 25 | 220 | 1.24e-14 | 73.9 |
Msa0519130 | AT1G14560.3 | 27.273 | 121 | 72 | 2 | 391 | 495 | 4 | 124 | 2.68e-11 | 63.9 |
Msa0519130 | AT5G66380.1 | 30.241 | 291 | 184 | 7 | 219 | 492 | 12 | 300 | 7.93e-28 | 113 |
Msa0519130 | AT5G66380.1 | 28.571 | 189 | 119 | 4 | 223 | 396 | 116 | 303 | 4.95e-11 | 64.3 |
Msa0519130 | AT5G56450.1 | 25.497 | 302 | 195 | 6 | 215 | 493 | 32 | 326 | 1.66e-27 | 113 |
Msa0519130 | AT5G64970.3 | 30.272 | 294 | 173 | 8 | 203 | 474 | 121 | 404 | 4.17e-27 | 113 |
Msa0519130 | AT5G64970.3 | 28.492 | 179 | 120 | 3 | 311 | 489 | 135 | 305 | 1.42e-12 | 69.7 |
Msa0519130 | AT1G25380.1 | 28.261 | 276 | 176 | 7 | 229 | 488 | 33 | 302 | 7.72e-27 | 112 |
Msa0519130 | AT1G25380.2 | 28.261 | 276 | 176 | 7 | 229 | 488 | 33 | 302 | 7.72e-27 | 112 |
Msa0519130 | AT2G35800.1 | 21.627 | 467 | 322 | 13 | 35 | 493 | 380 | 810 | 3.62e-25 | 110 |
Msa0519130 | AT1G74240.2 | 28.028 | 289 | 175 | 6 | 233 | 492 | 4 | 288 | 2.04e-24 | 103 |
Msa0519130 | AT1G74240.2 | 28.646 | 192 | 110 | 5 | 325 | 493 | 2 | 189 | 2.17e-16 | 80.5 |
Msa0519130 | AT4G11440.1 | 26.733 | 303 | 196 | 8 | 204 | 494 | 317 | 605 | 9.33e-23 | 102 |
Msa0519130 | AT4G11440.2 | 26.733 | 303 | 196 | 8 | 204 | 494 | 317 | 605 | 9.33e-23 | 102 |
Msa0519130 | AT2G30160.1 | 28.720 | 289 | 182 | 8 | 215 | 489 | 40 | 318 | 1.42e-21 | 96.3 |
Msa0519130 | AT2G30160.1 | 27.322 | 183 | 123 | 4 | 311 | 492 | 42 | 215 | 1.72e-15 | 78.2 |
Msa0519130 | AT1G14140.1 | 24.161 | 298 | 205 | 8 | 207 | 489 | 6 | 297 | 2.14e-20 | 92.0 |
Msa0519130 | AT1G34065.2 | 26.689 | 296 | 187 | 8 | 203 | 493 | 59 | 329 | 2.43e-20 | 92.4 |
Msa0519130 | AT1G34065.1 | 26.689 | 296 | 187 | 8 | 203 | 493 | 66 | 336 | 2.76e-20 | 92.4 |
Msa0519130 | AT4G39460.2 | 28.520 | 277 | 174 | 6 | 217 | 492 | 58 | 311 | 5.36e-20 | 91.3 |
Msa0519130 | AT4G39460.1 | 28.520 | 277 | 174 | 6 | 217 | 492 | 58 | 311 | 5.36e-20 | 91.3 |
Msa0519130 | AT4G39460.3 | 28.520 | 277 | 174 | 6 | 217 | 492 | 58 | 311 | 5.36e-20 | 91.3 |
Msa0519130 | AT5G17400.1 | 25.517 | 290 | 196 | 6 | 207 | 480 | 4 | 289 | 8.02e-20 | 90.5 |
Msa0519130 | AT1G07030.1 | 28.421 | 285 | 185 | 8 | 215 | 489 | 38 | 313 | 9.03e-20 | 90.9 |
Msa0519130 | AT1G07030.1 | 28.962 | 183 | 120 | 4 | 311 | 492 | 40 | 213 | 7.04e-16 | 79.3 |
Msa0519130 | AT5G46800.2 | 26.230 | 305 | 195 | 8 | 211 | 492 | 2 | 299 | 1.60e-18 | 86.7 |
Msa0519130 | AT5G46800.3 | 26.230 | 305 | 195 | 8 | 211 | 492 | 2 | 299 | 1.60e-18 | 86.7 |
Msa0519130 | AT5G46800.1 | 26.230 | 305 | 195 | 8 | 211 | 492 | 2 | 299 | 1.60e-18 | 86.7 |
Msa0519130 | AT3G54110.1 | 27.090 | 299 | 179 | 10 | 215 | 490 | 13 | 295 | 2.22e-18 | 86.3 |
Msa0519130 | AT5G13490.1 | 27.778 | 288 | 173 | 8 | 217 | 480 | 88 | 364 | 1.02e-17 | 85.5 |
Msa0519130 | AT5G13490.2 | 27.778 | 288 | 173 | 8 | 217 | 480 | 88 | 364 | 1.02e-17 | 85.5 |
Msa0519130 | AT5G58970.1 | 26.962 | 293 | 183 | 9 | 217 | 490 | 16 | 296 | 1.24e-17 | 84.0 |
Msa0519130 | AT4G28390.1 | 27.758 | 281 | 181 | 9 | 217 | 480 | 83 | 358 | 1.43e-17 | 84.7 |
Msa0519130 | AT4G28390.2 | 27.758 | 281 | 181 | 9 | 217 | 480 | 83 | 358 | 1.43e-17 | 84.7 |
Msa0519130 | AT5G01340.1 | 24.653 | 288 | 190 | 11 | 218 | 488 | 18 | 295 | 3.94e-16 | 79.7 |
Msa0519130 | AT2G39970.1 | 27.511 | 229 | 134 | 8 | 292 | 494 | 101 | 323 | 4.94e-16 | 79.7 |
Msa0519130 | AT3G08580.2 | 25.267 | 281 | 189 | 6 | 217 | 480 | 84 | 360 | 8.04e-15 | 76.6 |
Msa0519130 | AT3G08580.1 | 25.267 | 281 | 189 | 6 | 217 | 480 | 84 | 360 | 8.04e-15 | 76.6 |
Msa0519130 | AT5G15640.2 | 24.759 | 311 | 206 | 9 | 207 | 495 | 11 | 315 | 8.99e-15 | 75.9 |
Msa0519130 | AT5G15640.2 | 30.952 | 210 | 122 | 8 | 202 | 392 | 106 | 311 | 2.55e-14 | 74.3 |
Msa0519130 | AT1G72820.1 | 23.676 | 321 | 212 | 7 | 203 | 490 | 16 | 336 | 1.02e-14 | 75.9 |
Msa0519130 | AT1G72820.1 | 26.512 | 215 | 122 | 7 | 220 | 400 | 131 | 343 | 5.83e-11 | 64.3 |
Msa0519130 | AT1G72820.2 | 23.676 | 321 | 212 | 7 | 203 | 490 | 16 | 336 | 1.02e-14 | 75.9 |
Msa0519130 | AT1G72820.2 | 26.512 | 215 | 122 | 7 | 220 | 400 | 131 | 343 | 5.83e-11 | 64.3 |
Msa0519130 | AT5G15640.1 | 30.952 | 210 | 122 | 8 | 202 | 392 | 113 | 318 | 2.73e-14 | 74.3 |
Msa0519130 | AT5G15640.1 | 24.510 | 306 | 203 | 9 | 212 | 495 | 23 | 322 | 3.60e-14 | 73.9 |
Msa0519130 | AT5G26200.1 | 25.413 | 303 | 201 | 8 | 212 | 490 | 34 | 335 | 5.11e-14 | 73.6 |
Msa0519130 | AT1G79900.1 | 23.673 | 245 | 179 | 2 | 223 | 467 | 22 | 258 | 6.91e-14 | 72.8 |
Msa0519130 | AT1G79900.1 | 28.402 | 169 | 117 | 3 | 220 | 387 | 112 | 277 | 7.37e-14 | 72.8 |
Msa0519130 | AT5G19760.1 | 23.860 | 285 | 199 | 8 | 215 | 490 | 16 | 291 | 5.34e-13 | 70.1 |
Msa0519130 | AT5G14040.1 | 29.032 | 248 | 158 | 9 | 220 | 453 | 84 | 327 | 5.93e-13 | 70.9 |
Msa0519130 | AT2G26360.1 | 23.571 | 280 | 196 | 6 | 215 | 492 | 113 | 376 | 8.01e-13 | 70.5 |
Msa0519130 | AT3G48850.1 | 27.237 | 257 | 162 | 9 | 216 | 453 | 66 | 316 | 1.12e-11 | 66.6 |
Msa0519130 | AT2G33820.1 | 23.607 | 305 | 198 | 12 | 215 | 495 | 16 | 309 | 2.08e-11 | 65.5 |
Msa0519130 | AT4G27940.1 | 27.727 | 220 | 128 | 8 | 205 | 399 | 195 | 408 | 2.63e-11 | 65.9 |
Msa0519130 | AT5G42130.1 | 25.094 | 267 | 180 | 8 | 233 | 489 | 134 | 390 | 7.09e-11 | 64.7 |
Msa0519130 | AT3G05290.1 | 24.662 | 296 | 184 | 12 | 219 | 488 | 13 | 295 | 9.50e-11 | 63.5 |
Find 145 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAGGATGTGGGACAATTTC+TGG | 0.159419 | 3_4:+71047640 | Msa0519130:CDS |
TTCTTTGATGGAGGGAATAA+TGG | 0.216426 | 3_4:+71045324 | Msa0519130:CDS |
TAGAATTTGATTGCACTTTC+CGG | 0.232865 | 3_4:-71047129 | None:intergenic |
GAACAGTTCCGATGCTTATA+AGG | 0.241893 | 3_4:+71047860 | Msa0519130:CDS |
TATTACTCCTTTGGGCAATA+TGG | 0.252408 | 3_4:+71048217 | Msa0519130:three_prime_UTR |
ATCATGAATAATATATTTCT+TGG | 0.252850 | 3_4:-71047472 | None:intergenic |
AAGAAAATTATTACTCCTTT+GGG | 0.278498 | 3_4:+71048209 | Msa0519130:three_prime_UTR |
AAAGAAAATTATTACTCCTT+TGG | 0.286922 | 3_4:+71048208 | Msa0519130:three_prime_UTR |
AAGAAATAACTATACCTAAT+TGG | 0.287088 | 3_4:-71048124 | None:intergenic |
GAACCCTCACAAAGAATATA+TGG | 0.303659 | 3_4:+71047340 | Msa0519130:CDS |
CAATGAGTTTAGGAGATATA+TGG | 0.307264 | 3_4:+71045467 | Msa0519130:CDS |
GGCACAACTTTGAGTAGATT+TGG | 0.313751 | 3_4:-71047951 | None:intergenic |
AGAGCATCCCAAAGCTCTTC+AGG | 0.318069 | 3_4:-71045558 | None:intergenic |
TTTCAGCATGAAGGCTTTAG+AGG | 0.319780 | 3_4:+71047909 | Msa0519130:CDS |
TCAAATTTCAAATGCTCAAA+AGG | 0.323030 | 3_4:+71045149 | Msa0519130:five_prime_UTR |
CAAGGTAACAATTCGGATAT+TGG | 0.324252 | 3_4:+71047189 | Msa0519130:CDS |
TATTCTTCCTGAAGAGCTTT+GGG | 0.324433 | 3_4:+71045551 | Msa0519130:CDS |
TGATCTAGTGAAATGTTTCT+TGG | 0.329861 | 3_4:-71045237 | None:intergenic |
CACCACCCATTGTGTTGATT+TGG | 0.334992 | 3_4:-71045194 | None:intergenic |
TATGGAAGCAAGATAATATA+CGG | 0.336371 | 3_4:+71047064 | Msa0519130:CDS |
AAGGGTGACTGACTGCATTT+TGG | 0.338172 | 3_4:-71044868 | None:intergenic |
AGCTGCGAGCATTACTTATA+TGG | 0.341395 | 3_4:+71047974 | Msa0519130:CDS |
GCGTGCTTGCTAATGTCTTC+AGG | 0.353904 | 3_4:-71046904 | None:intergenic |
GGGTTGATTACAATGAGTTT+AGG | 0.355020 | 3_4:+71045457 | Msa0519130:CDS |
GGACTTCTTCCGTCTGTGAT+TGG | 0.367551 | 3_4:+71047393 | Msa0519130:CDS |
GCCTTGTGGTACTTCCAATT+AGG | 0.369977 | 3_4:+71048110 | Msa0519130:three_prime_UTR |
CGCATCTAGCTGCTTAGTAT+TGG | 0.372282 | 3_4:+71048077 | Msa0519130:three_prime_UTR |
TTGGTGTTGAATAATAAAAC+TGG | 0.373166 | 3_4:-71044849 | None:intergenic |
GTATTCTTCCTGAAGAGCTT+TGG | 0.373610 | 3_4:+71045550 | Msa0519130:CDS |
AGCTTTGGGATGCTCTTGAT+AGG | 0.382850 | 3_4:+71045565 | Msa0519130:CDS |
TTTGTGAGGGTTCCAAGTTT+AGG | 0.385328 | 3_4:-71047330 | None:intergenic |
GATGAAAATTACAACATAAC+TGG | 0.386592 | 3_4:-71045066 | None:intergenic |
TTTCTTGGACATATCTTTCA+AGG | 0.392181 | 3_4:-71047457 | None:intergenic |
AACAGTTCCGATGCTTATAA+GGG | 0.400067 | 3_4:+71047861 | Msa0519130:CDS |
TTTCTGCTGTGACGACAATA+TGG | 0.402693 | 3_4:+71047046 | Msa0519130:CDS |
TCTTTGATGGAGGGAATAAT+GGG | 0.407756 | 3_4:+71045325 | Msa0519130:CDS |
AATTCGGATATTGGTGCTGC+TGG | 0.411872 | 3_4:+71047198 | Msa0519130:CDS |
GATCACGTGCTTGAGGCATT+AGG | 0.419468 | 3_4:+71045255 | Msa0519130:CDS |
ATATATGGATGATAAGGAAT+TGG | 0.420302 | 3_4:+71045482 | Msa0519130:CDS |
ATCAACCCTACCATCACTAT+TGG | 0.422211 | 3_4:-71045442 | None:intergenic |
TCTCAGTCCAACATCAGATC+TGG | 0.440276 | 3_4:+71045101 | Msa0519130:five_prime_UTR |
CAATGCTGCAGGAATAGAAA+TGG | 0.442718 | 3_4:+71046705 | Msa0519130:CDS |
GATCTAGTGAAATGTTTCTT+GGG | 0.443011 | 3_4:-71045236 | None:intergenic |
ACATTAGCAAGCACGCTAAC+CGG | 0.449483 | 3_4:+71046911 | Msa0519130:CDS |
GGTGGAAGGGCTCCTAAACT+TGG | 0.458284 | 3_4:+71047318 | Msa0519130:CDS |
TGGGATGCTCTTGATAGGGC+TGG | 0.459417 | 3_4:+71045570 | Msa0519130:CDS |
TAGGAGATATATGGATGATA+AGG | 0.460917 | 3_4:+71045476 | Msa0519130:CDS |
CTTGCATATTTATACTCCGC+TGG | 0.463043 | 3_4:-71045396 | None:intergenic |
GATTATGTTCAGATAGAGAA+AGG | 0.470841 | 3_4:+71045354 | Msa0519130:CDS |
CACGTTGACAAGGACAATAA+TGG | 0.472418 | 3_4:+71046757 | Msa0519130:CDS |
TTGAAAATATATATCACCAT+TGG | 0.474683 | 3_4:+71046839 | Msa0519130:CDS |
CTCCATCAAAGAAATTGAAA+AGG | 0.478589 | 3_4:-71045314 | None:intergenic |
ATTGGAAGTACCACAAGGCC+AGG | 0.479626 | 3_4:-71048106 | None:intergenic |
GCGAGATCAATGCCAGCATA+AGG | 0.481632 | 3_4:-71047423 | None:intergenic |
TGAAAATATATATCACCATT+GGG | 0.482057 | 3_4:+71046840 | Msa0519130:CDS |
TAGGTGAATCAAAAGAAGAA+AGG | 0.482226 | 3_4:+71045274 | Msa0519130:CDS |
AAATATATTATTCATGATAG+TGG | 0.486766 | 3_4:+71047477 | Msa0519130:CDS |
TAAAACCAAATCAACACAAT+GGG | 0.488555 | 3_4:+71045189 | Msa0519130:exon |
AGAGGAGCTTGCTCGCTTTG+TGG | 0.489148 | 3_4:+71046732 | Msa0519130:CDS |
GGGACAATTTCTGGAACCCT+TGG | 0.491674 | 3_4:+71047649 | Msa0519130:CDS |
CTATGGATCTTATCAAAACT+AGG | 0.493639 | 3_4:+71047274 | Msa0519130:CDS |
CAACAATGCAAGATTTACTA+AGG | 0.494362 | 3_4:-71048170 | None:intergenic |
CAAATTTCAAATGCTCAAAA+GGG | 0.494652 | 3_4:+71045150 | Msa0519130:five_prime_UTR |
TCCTAGTTGTACTAGAGGAC+CGG | 0.496637 | 3_4:-71047623 | None:intergenic |
CAGCGATAAAATATTTGCTC+CGG | 0.498497 | 3_4:-71046930 | None:intergenic |
TAGATGCGTGTGGGGAAACC+AGG | 0.499485 | 3_4:-71048062 | None:intergenic |
GCTTAGTATTGGCTTAGCCC+TGG | 0.502724 | 3_4:+71048088 | Msa0519130:three_prime_UTR |
AGGTGAATCAAAAGAAGAAA+GGG | 0.504788 | 3_4:+71045275 | Msa0519130:CDS |
ATGAGCAGTTTCAATGCTGC+AGG | 0.505089 | 3_4:+71046694 | Msa0519130:CDS |
TTTATCGCTGGAGGAATAGC+AGG | 0.510692 | 3_4:+71046943 | Msa0519130:CDS |
CACTGCAGGTTATTCGTACT+AGG | 0.514009 | 3_4:+71047689 | Msa0519130:CDS |
CTTGGTCTCCAATGTCTACA+TGG | 0.514430 | 3_4:-71046873 | None:intergenic |
TTTATTTCCAGATCTGATGT+TGG | 0.516101 | 3_4:-71045108 | None:intergenic |
ATTATGTTCAGATAGAGAAA+GGG | 0.519083 | 3_4:+71045355 | Msa0519130:CDS |
AATCCATATATTCTTTGTGA+GGG | 0.521242 | 3_4:-71047343 | None:intergenic |
ATTGGCATGATTCCTTATGC+TGG | 0.525188 | 3_4:+71047411 | Msa0519130:CDS |
TACATGTGTCTATCCACTGC+AGG | 0.526699 | 3_4:+71047675 | Msa0519130:CDS |
AGATGCTCAAGGTAACAATT+CGG | 0.534432 | 3_4:+71047182 | Msa0519130:CDS |
TGTCTTCAGGAATGACAGCT+TGG | 0.536068 | 3_4:-71046891 | None:intergenic |
CCTCTAGTACAACTAGGATG+TGG | 0.540484 | 3_4:+71047628 | Msa0519130:CDS |
GCAGACCGCAATCTATCCTA+TGG | 0.541450 | 3_4:+71047257 | Msa0519130:CDS |
GCTATTGATGTTGAACATAG+TGG | 0.542144 | 3_4:+71045525 | Msa0519130:CDS |
AGGAGCCCTTCCACCTTCAG+AGG | 0.542507 | 3_4:-71047310 | None:intergenic |
ATATAAGTAATGCTCGCAGC+TGG | 0.542695 | 3_4:-71047972 | None:intergenic |
ATGGAAGCAAGATAATATAC+GGG | 0.544706 | 3_4:+71047065 | Msa0519130:CDS |
GCTTTGGGATGCTCTTGATA+GGG | 0.545989 | 3_4:+71045566 | Msa0519130:CDS |
GGCTTTAGAGGTTTCTACAA+AGG | 0.549054 | 3_4:+71047921 | Msa0519130:CDS |
GTGATGCCAATAGTGATGGT+AGG | 0.551120 | 3_4:+71045436 | Msa0519130:CDS |
AGGAATAGAAATGGATGAAG+AGG | 0.553086 | 3_4:+71046714 | Msa0519130:CDS |
CAACTTTGAGTAGATTTGGA+AGG | 0.557888 | 3_4:-71047947 | None:intergenic |
TTGGCTTAGCCCTGGCCTTG+TGG | 0.558664 | 3_4:+71048096 | Msa0519130:three_prime_UTR |
TGCACCTCTCGATCGTCTGA+AGG | 0.558903 | 3_4:+71046987 | Msa0519130:CDS |
CTTGTGCCTCTGAAGGTGGA+AGG | 0.560242 | 3_4:+71047304 | Msa0519130:CDS |
TAGTTCAGATAAGCATAATG+AGG | 0.562143 | 3_4:-71048305 | None:intergenic |
AAATGTGATGTCAAATGTGA+AGG | 0.563503 | 3_4:-71044887 | None:intergenic |
CCTAGTTGTACTAGAGGACC+GGG | 0.564027 | 3_4:-71047622 | None:intergenic |
CAGACTTGTGCCTCTGAAGG+TGG | 0.565219 | 3_4:+71047300 | Msa0519130:CDS |
AACATAACTGGTAATTGCGA+CGG | 0.565629 | 3_4:-71045054 | None:intergenic |
CTACAGACTTGTGCCTCTGA+AGG | 0.568315 | 3_4:+71047297 | Msa0519130:CDS |
TTAGCAGGTGGCGTGGCTGG+TGG | 0.570129 | 3_4:+71047228 | Msa0519130:CDS |
CTAAGCAGCTAGATGCGTGT+GGG | 0.570130 | 3_4:-71048071 | None:intergenic |
TTGTGCCTCTGAAGGTGGAA+GGG | 0.574169 | 3_4:+71047305 | Msa0519130:CDS |
CCCGGTCCTCTAGTACAACT+AGG | 0.575820 | 3_4:+71047622 | Msa0519130:CDS |
CTAGTACGAATAACCTGCAG+TGG | 0.576215 | 3_4:-71047688 | None:intergenic |
TTCACTAGATCACGTGCTTG+AGG | 0.578433 | 3_4:+71045248 | Msa0519130:CDS |
ATTCGGATATTGGTGCTGCT+GGG | 0.584583 | 3_4:+71047199 | Msa0519130:CDS |
AAACATTCCCTTATAAGCAT+CGG | 0.584700 | 3_4:-71047868 | None:intergenic |
GAATCCATATATTCTTTGTG+AGG | 0.586586 | 3_4:-71047344 | None:intergenic |
AAGAATATATGGATTCAAGA+AGG | 0.587277 | 3_4:+71047351 | Msa0519130:CDS |
GAATGTTGTGAAGGTAGCAC+CGG | 0.587546 | 3_4:+71047110 | Msa0519130:CDS |
CTTTGTGGAGCACGTTGACA+AGG | 0.587754 | 3_4:+71046747 | Msa0519130:CDS |
TGATGCCAATAGTGATGGTA+GGG | 0.593762 | 3_4:+71045437 | Msa0519130:CDS |
CAAATCAACACAATGGGTGG+TGG | 0.594305 | 3_4:+71045195 | Msa0519130:exon |
TTTCAATAGTTGCTTCATGA+GGG | 0.596353 | 3_4:-71046822 | None:intergenic |
GATAGACACATGTAGCTCCA+AGG | 0.598066 | 3_4:-71047666 | None:intergenic |
CTCTAGTACAACTAGGATGT+GGG | 0.600264 | 3_4:+71047629 | Msa0519130:CDS |
AATGTTAAAATACAGTGCTG+TGG | 0.600408 | 3_4:+71048365 | Msa0519130:three_prime_UTR |
CGGATATTGGTGCTGCTGGG+AGG | 0.600630 | 3_4:+71047202 | Msa0519130:CDS |
AATGTGATGTCAAATGTGAA+GGG | 0.601815 | 3_4:-71044886 | None:intergenic |
AAAGTAATTGGAGATGCTCA+AGG | 0.602778 | 3_4:+71047171 | Msa0519130:CDS |
AGAGTGTACCATGTAGACAT+TGG | 0.605955 | 3_4:+71046865 | Msa0519130:CDS |
AACCAAATCAACACAATGGG+TGG | 0.607177 | 3_4:+71045192 | Msa0519130:exon |
TGTGTTTCAAGAGTCACAGA+AGG | 0.609301 | 3_4:-71048252 | None:intergenic |
TAATGGATTGAATGTTGTGA+AGG | 0.610631 | 3_4:+71047101 | Msa0519130:CDS |
CAACATTCAATCCATTACCT+CGG | 0.611488 | 3_4:-71047095 | None:intergenic |
ATCTGCATTGCAAATTCCAG+CGG | 0.612606 | 3_4:+71045380 | Msa0519130:CDS |
CCACATCCTAGTTGTACTAG+AGG | 0.616859 | 3_4:-71047628 | None:intergenic |
TTGGAAGTACCACAAGGCCA+GGG | 0.624233 | 3_4:-71048105 | None:intergenic |
CATGGTACACTCTCTCCCAA+TGG | 0.626001 | 3_4:-71046855 | None:intergenic |
GGAATCATGCCAATCACAGA+CGG | 0.632261 | 3_4:-71047402 | None:intergenic |
ACTAAGCAGCTAGATGCGTG+TGG | 0.638285 | 3_4:-71048072 | None:intergenic |
ATAGACACATGTAGCTCCAA+GGG | 0.639088 | 3_4:-71047665 | None:intergenic |
TCACAGACGGAAGAAGTCCT+CGG | 0.639212 | 3_4:-71047389 | None:intergenic |
TTAAAACCAAATCAACACAA+TGG | 0.640684 | 3_4:+71045188 | Msa0519130:exon |
GTTTGTGATGCCAATAGTGA+TGG | 0.647265 | 3_4:+71045432 | Msa0519130:CDS |
TAAGCAGCTAGATGCGTGTG+GGG | 0.652912 | 3_4:-71048070 | None:intergenic |
ACGATCGAGAGGTGCAGTCG+CGG | 0.656594 | 3_4:-71046980 | None:intergenic |
ATCACCTTCAGACGATCGAG+AGG | 0.659545 | 3_4:-71046991 | None:intergenic |
GGACCTCGAGCTTTCTACCG+AGG | 0.662290 | 3_4:+71047372 | Msa0519130:CDS |
TATCTATCTAGAAAATCACC+TGG | 0.664405 | 3_4:+71048044 | Msa0519130:three_prime_UTR |
ATATTTGCCATATTGCCCAA+AGG | 0.668747 | 3_4:-71048224 | None:intergenic |
AAGATCCATAGGATAGATTG+CGG | 0.679419 | 3_4:-71047262 | None:intergenic |
AGTCCTCGGTAGAAAGCTCG+AGG | 0.680432 | 3_4:-71047375 | None:intergenic |
ACCTAATTGGAAGTACCACA+AGG | 0.708571 | 3_4:-71048111 | None:intergenic |
TGGAAGCAAGATAATATACG+GGG | 0.738439 | 3_4:+71047066 | Msa0519130:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTTATACATAATAAATATA+GGG | - | chr3_4:71046037-71046056 | None:intergenic | 10.0% |
!! | TACTTATACATAATAAATAT+AGG | - | chr3_4:71046038-71046057 | None:intergenic | 10.0% |
!! | TATTTATTATGTATAAGTAT+AGG | + | chr3_4:71046039-71046058 | Msa0519130:intron | 10.0% |
!! | ATTTATTATGTATAAGTATA+GGG | + | chr3_4:71046040-71046059 | Msa0519130:intron | 10.0% |
!!! | TTTTATTTTGTTATGTTTTG+TGG | - | chr3_4:71044963-71044982 | None:intergenic | 15.0% |
!! | TAGAAATAATTACTTTATGT+AGG | + | chr3_4:71045670-71045689 | Msa0519130:intron | 15.0% |
!!! | AGTATTTAATGATTTTTAAG+AGG | + | chr3_4:71045915-71045934 | Msa0519130:intron | 15.0% |
!! | TTATACATAATAAATATAGG+GGG | - | chr3_4:71046035-71046054 | None:intergenic | 15.0% |
!! | CTTATACATAATAAATATAG+GGG | - | chr3_4:71046036-71046055 | None:intergenic | 15.0% |
!! | TTTATTATGTATAAGTATAG+GGG | + | chr3_4:71046041-71046060 | Msa0519130:intron | 15.0% |
!! | GTATTTATTCAAAAATAGAA+AGG | + | chr3_4:71046127-71046146 | Msa0519130:intron | 15.0% |
!! | ATCATGAATAATATATTTCT+TGG | - | chr3_4:71047475-71047494 | None:intergenic | 15.0% |
!! | AAATATATTATTCATGATAG+TGG | + | chr3_4:71047477-71047496 | Msa0519130:CDS | 15.0% |
!!! | GTTTTGTATTTGTTATTTTA+GGG | + | chr3_4:71047781-71047800 | Msa0519130:intron | 15.0% |
!!! | TGGTTATTTCTTACTATTTT+TGG | + | chr3_4:71045636-71045655 | Msa0519130:intron | 20.0% |
!! | TAAAATCAAGCTTGTAATAT+TGG | + | chr3_4:71046337-71046356 | Msa0519130:intron | 20.0% |
!! | ACAATAAAACTTTCACAAAA+AGG | - | chr3_4:71046645-71046664 | None:intergenic | 20.0% |
!! | TTGAAAATATATATCACCAT+TGG | + | chr3_4:71046839-71046858 | Msa0519130:CDS | 20.0% |
!! | TGAAAATATATATCACCATT+GGG | + | chr3_4:71046840-71046859 | Msa0519130:CDS | 20.0% |
!! | GAAATGTTGAAAAAAGTAAT+TGG | + | chr3_4:71047159-71047178 | Msa0519130:CDS | 20.0% |
!!! | GGTTTTGTATTTGTTATTTT+AGG | + | chr3_4:71047780-71047799 | Msa0519130:intron | 20.0% |
!!! | TTACATTTTAATCCTTTTTC+AGG | + | chr3_4:71047820-71047839 | Msa0519130:intron | 20.0% |
!! | AAGAAATAACTATACCTAAT+TGG | - | chr3_4:71048127-71048146 | None:intergenic | 20.0% |
!! | AAAGAAAATTATTACTCCTT+TGG | + | chr3_4:71048208-71048227 | Msa0519130:three_prime_UTR | 20.0% |
!! | AAGAAAATTATTACTCCTTT+GGG | + | chr3_4:71048209-71048228 | Msa0519130:three_prime_UTR | 20.0% |
!!! | TTGGTGTTGAATAATAAAAC+TGG | - | chr3_4:71044852-71044871 | None:intergenic | 25.0% |
! | GATGAAAATTACAACATAAC+TGG | - | chr3_4:71045069-71045088 | None:intergenic | 25.0% |
!!! | TTTTGAGCATTTGAAATTTG+AGG | - | chr3_4:71045150-71045169 | None:intergenic | 25.0% |
! | TCAAATTTCAAATGCTCAAA+AGG | + | chr3_4:71045149-71045168 | Msa0519130:five_prime_UTR | 25.0% |
! | CAAATTTCAAATGCTCAAAA+GGG | + | chr3_4:71045150-71045169 | Msa0519130:five_prime_UTR | 25.0% |
! | TTAAAACCAAATCAACACAA+TGG | + | chr3_4:71045188-71045207 | Msa0519130:exon | 25.0% |
! | TAAAACCAAATCAACACAAT+GGG | + | chr3_4:71045189-71045208 | Msa0519130:exon | 25.0% |
!! | TTTTCAATTTCTTTGATGGA+GGG | + | chr3_4:71045316-71045335 | Msa0519130:CDS | 25.0% |
! | ATTATGTTCAGATAGAGAAA+GGG | + | chr3_4:71045355-71045374 | Msa0519130:CDS | 25.0% |
! | ATATATGGATGATAAGGAAT+TGG | + | chr3_4:71045482-71045501 | Msa0519130:CDS | 25.0% |
! | ACCAAAAAAGATTAAACTAG+AGG | - | chr3_4:71045620-71045639 | None:intergenic | 25.0% |
!!! | TGTAGGTTGAGTTTTTTATT+AGG | + | chr3_4:71045687-71045706 | Msa0519130:intron | 25.0% |
!!! | TAACTTTTCTACTTTAAGAC+TGG | - | chr3_4:71045756-71045775 | None:intergenic | 25.0% |
!!! | TAATGATTTTTAAGAGGAGA+TGG | + | chr3_4:71045921-71045940 | Msa0519130:intron | 25.0% |
! | TTCTCAACAAATAACTATGA+TGG | + | chr3_4:71046104-71046123 | Msa0519130:intron | 25.0% |
! | TCTCAACAAATAACTATGAT+GGG | + | chr3_4:71046105-71046124 | Msa0519130:intron | 25.0% |
!! | CTTTTAGACTTATGTAGTTT+AGG | + | chr3_4:71046360-71046379 | Msa0519130:intron | 25.0% |
!! | CTTATGTAGTTTAGGATAAA+TGG | + | chr3_4:71046368-71046387 | Msa0519130:intron | 25.0% |
!! | AGTTTAGGATAAATGGAAAT+TGG | + | chr3_4:71046375-71046394 | Msa0519130:intron | 25.0% |
!! | TATATGCTTTGCCTTTTTAA+CGG | + | chr3_4:71046427-71046446 | Msa0519130:intron | 25.0% |
!! | AATGGAAAAGGTATAAACTT+GGG | - | chr3_4:71046522-71046541 | None:intergenic | 25.0% |
! | AACACAATATAGAATGGAAA+AGG | - | chr3_4:71046534-71046553 | None:intergenic | 25.0% |
! | GTAACAAACACAATATAGAA+TGG | - | chr3_4:71046540-71046559 | None:intergenic | 25.0% |
!! | TTGTTACATCTTTGTTTGTT+TGG | + | chr3_4:71046553-71046572 | Msa0519130:intron | 25.0% |
! | TGCTTATGATAAATACTATC+AGG | - | chr3_4:71046675-71046694 | None:intergenic | 25.0% |
! | TATGGAAGCAAGATAATATA+CGG | + | chr3_4:71047064-71047083 | Msa0519130:CDS | 25.0% |
! | AATCCATATATTCTTTGTGA+GGG | - | chr3_4:71047346-71047365 | None:intergenic | 25.0% |
! | AAGAATATATGGATTCAAGA+AGG | + | chr3_4:71047351-71047370 | Msa0519130:CDS | 25.0% |
!!! | TATTATTCATGATAGTGGTA+TGG | + | chr3_4:71047482-71047501 | Msa0519130:intron | 25.0% |
!!! | GAAATAGTTTCACTTTTCAA+AGG | - | chr3_4:71047574-71047593 | None:intergenic | 25.0% |
! | ATGATTCTGATCATTTCATT+TGG | - | chr3_4:71047743-71047762 | None:intergenic | 25.0% |
!! | AATTTTGTAGTCAGAAACAT+GGG | + | chr3_4:71048274-71048293 | Msa0519130:three_prime_UTR | 25.0% |
AATGTGATGTCAAATGTGAA+GGG | - | chr3_4:71044889-71044908 | None:intergenic | 30.0% | |
AAATGTGATGTCAAATGTGA+AGG | - | chr3_4:71044890-71044909 | None:intergenic | 30.0% | |
! | ATGTTTTGTGGTGTATCTTT+GGG | - | chr3_4:71044951-71044970 | None:intergenic | 30.0% |
! | TATGTTTTGTGGTGTATCTT+TGG | - | chr3_4:71044952-71044971 | None:intergenic | 30.0% |
TTTATTTCCAGATCTGATGT+TGG | - | chr3_4:71045111-71045130 | None:intergenic | 30.0% | |
GATCTAGTGAAATGTTTCTT+GGG | - | chr3_4:71045239-71045258 | None:intergenic | 30.0% | |
TGATCTAGTGAAATGTTTCT+TGG | - | chr3_4:71045240-71045259 | None:intergenic | 30.0% | |
TAGGTGAATCAAAAGAAGAA+AGG | + | chr3_4:71045274-71045293 | Msa0519130:CDS | 30.0% | |
AGGTGAATCAAAAGAAGAAA+GGG | + | chr3_4:71045275-71045294 | Msa0519130:CDS | 30.0% | |
! | AGCCTTTTCAATTTCTTTGA+TGG | + | chr3_4:71045312-71045331 | Msa0519130:CDS | 30.0% |
CTCCATCAAAGAAATTGAAA+AGG | - | chr3_4:71045317-71045336 | None:intergenic | 30.0% | |
! | CTTTTCAATTTCTTTGATGG+AGG | + | chr3_4:71045315-71045334 | Msa0519130:CDS | 30.0% |
GATTATGTTCAGATAGAGAA+AGG | + | chr3_4:71045354-71045373 | Msa0519130:CDS | 30.0% | |
CAATGAGTTTAGGAGATATA+TGG | + | chr3_4:71045467-71045486 | Msa0519130:CDS | 30.0% | |
TAGGAGATATATGGATGATA+AGG | + | chr3_4:71045476-71045495 | Msa0519130:CDS | 30.0% | |
AAACTAGAGGCAAAACAAAA+AGG | - | chr3_4:71045607-71045626 | None:intergenic | 30.0% | |
!!! | GCCTCTAGTTTAATCTTTTT+TGG | + | chr3_4:71045616-71045635 | Msa0519130:intron | 30.0% |
GAAAAGCCAAAGTTTGAATT+CGG | + | chr3_4:71045818-71045837 | Msa0519130:intron | 30.0% | |
TGTCTTACACAGAATAGTAT+GGG | - | chr3_4:71045985-71046004 | None:intergenic | 30.0% | |
TTGTCTTACACAGAATAGTA+TGG | - | chr3_4:71045986-71046005 | None:intergenic | 30.0% | |
ACATAATAAATATAGGGGGA+GGG | - | chr3_4:71046031-71046050 | None:intergenic | 30.0% | |
TACATAATAAATATAGGGGG+AGG | - | chr3_4:71046032-71046051 | None:intergenic | 30.0% | |
TCCTTGCAATTATGTTTCAA+TGG | - | chr3_4:71046071-71046090 | None:intergenic | 30.0% | |
ATTGAAACATAATTGCAAGG+AGG | + | chr3_4:71046070-71046089 | Msa0519130:intron | 30.0% | |
AGGTATGTTTAAATAGCACA+TGG | - | chr3_4:71046153-71046172 | None:intergenic | 30.0% | |
GATAAATGGAAATTGGATTG+TGG | + | chr3_4:71046382-71046401 | Msa0519130:intron | 30.0% | |
TGTGGATTCTATTATTGTGA+AGG | + | chr3_4:71046400-71046419 | Msa0519130:intron | 30.0% | |
GTGGATTCTATTATTGTGAA+GGG | + | chr3_4:71046401-71046420 | Msa0519130:intron | 30.0% | |
! | ATATGCTTTGCCTTTTTAAC+GGG | + | chr3_4:71046428-71046447 | Msa0519130:intron | 30.0% |
GTTAAAATGTCCCGTTAAAA+AGG | - | chr3_4:71046441-71046460 | None:intergenic | 30.0% | |
! | GAATGGAAAAGGTATAAACT+TGG | - | chr3_4:71046523-71046542 | None:intergenic | 30.0% |
GTTATTGTGGATATTGAAGA+TGG | + | chr3_4:71046615-71046634 | Msa0519130:intron | 30.0% | |
!! | GAACTATCACTTTTGAAGAA+TGG | + | chr3_4:71046779-71046798 | Msa0519130:CDS | 30.0% |
TTTCAATAGTTGCTTCATGA+GGG | - | chr3_4:71046825-71046844 | None:intergenic | 30.0% | |
! | TTTTCAATAGTTGCTTCATG+AGG | - | chr3_4:71046826-71046845 | None:intergenic | 30.0% |
ATGGAAGCAAGATAATATAC+GGG | + | chr3_4:71047065-71047084 | Msa0519130:CDS | 30.0% | |
!! | TAATGGATTGAATGTTGTGA+AGG | + | chr3_4:71047101-71047120 | Msa0519130:CDS | 30.0% |
TAGAATTTGATTGCACTTTC+CGG | - | chr3_4:71047132-71047151 | None:intergenic | 30.0% | |
!!! | CTAGTTTTGATAAGATCCAT+AGG | - | chr3_4:71047276-71047295 | None:intergenic | 30.0% |
CTATGGATCTTATCAAAACT+AGG | + | chr3_4:71047274-71047293 | Msa0519130:CDS | 30.0% | |
GAATCCATATATTCTTTGTG+AGG | - | chr3_4:71047347-71047366 | None:intergenic | 30.0% | |
TTTCTTGGACATATCTTTCA+AGG | - | chr3_4:71047460-71047479 | None:intergenic | 30.0% | |
CTGATCATTTCATTTGGATA+AGG | - | chr3_4:71047737-71047756 | None:intergenic | 30.0% | |
!! | TCATTTGTGTTTTTCAGAAC+TGG | + | chr3_4:71047759-71047778 | Msa0519130:intron | 30.0% |
AAACATTCCCTTATAAGCAT+CGG | - | chr3_4:71047871-71047890 | None:intergenic | 30.0% | |
TATCTATCTAGAAAATCACC+TGG | + | chr3_4:71048044-71048063 | Msa0519130:three_prime_UTR | 30.0% | |
CAACAATGCAAGATTTACTA+AGG | - | chr3_4:71048173-71048192 | None:intergenic | 30.0% | |
! | CAATTTTGTAGTCAGAAACA+TGG | + | chr3_4:71048273-71048292 | Msa0519130:three_prime_UTR | 30.0% |
TAGTTCAGATAAGCATAATG+AGG | - | chr3_4:71048308-71048327 | None:intergenic | 30.0% | |
AATGTTAAAATACAGTGCTG+TGG | + | chr3_4:71048365-71048384 | Msa0519130:three_prime_UTR | 30.0% | |
AACATAACTGGTAATTGCGA+CGG | - | chr3_4:71045057-71045076 | None:intergenic | 35.0% | |
TTCTTTGATGGAGGGAATAA+TGG | + | chr3_4:71045324-71045343 | Msa0519130:CDS | 35.0% | |
TCTTTGATGGAGGGAATAAT+GGG | + | chr3_4:71045325-71045344 | Msa0519130:CDS | 35.0% | |
! | ATATGCAAGAGAGCTTTTCA+TGG | + | chr3_4:71045410-71045429 | Msa0519130:CDS | 35.0% |
! | GGGTTGATTACAATGAGTTT+AGG | + | chr3_4:71045457-71045476 | Msa0519130:CDS | 35.0% |
GCTATTGATGTTGAACATAG+TGG | + | chr3_4:71045525-71045544 | Msa0519130:CDS | 35.0% | |
TATTCTTCCTGAAGAGCTTT+GGG | + | chr3_4:71045551-71045570 | Msa0519130:CDS | 35.0% | |
!!! | TTACCCAAGTGTTTTTTCCA+CGG | - | chr3_4:71045892-71045911 | None:intergenic | 35.0% |
ATTTAAGCACACCTCAAGAA+AGG | - | chr3_4:71045953-71045972 | None:intergenic | 35.0% | |
CATAATAAATATAGGGGGAG+GGG | - | chr3_4:71046030-71046049 | None:intergenic | 35.0% | |
GCCATTGAAACATAATTGCA+AGG | + | chr3_4:71046067-71046086 | Msa0519130:intron | 35.0% | |
TAAACATACCTTCTCACTAG+AGG | + | chr3_4:71046162-71046181 | Msa0519130:intron | 35.0% | |
GAATTGAAGAGTGAAGACAT+CGG | - | chr3_4:71046255-71046274 | None:intergenic | 35.0% | |
TCACGGATAAATGTTACAAC+TGG | - | chr3_4:71046463-71046482 | None:intergenic | 35.0% | |
CAGTTAGTCAACATTCTTCA+CGG | - | chr3_4:71046480-71046499 | None:intergenic | 35.0% | |
! | GAAAAGGTATAAACTTGGGA+AGG | - | chr3_4:71046518-71046537 | None:intergenic | 35.0% |
AATATCCACAATAACTGCAG+TGG | - | chr3_4:71046610-71046629 | None:intergenic | 35.0% | |
AGGAATAGAAATGGATGAAG+AGG | + | chr3_4:71046714-71046733 | Msa0519130:CDS | 35.0% | |
CAGCGATAAAATATTTGCTC+CGG | - | chr3_4:71046933-71046952 | None:intergenic | 35.0% | |
! | AGCAAATATTTTATCGCTGG+AGG | + | chr3_4:71046934-71046953 | Msa0519130:CDS | 35.0% |
TGGAAGCAAGATAATATACG+GGG | + | chr3_4:71047066-71047085 | Msa0519130:CDS | 35.0% | |
CAACATTCAATCCATTACCT+CGG | - | chr3_4:71047098-71047117 | None:intergenic | 35.0% | |
AAAGTAATTGGAGATGCTCA+AGG | + | chr3_4:71047171-71047190 | Msa0519130:CDS | 35.0% | |
AGATGCTCAAGGTAACAATT+CGG | + | chr3_4:71047182-71047201 | Msa0519130:CDS | 35.0% | |
CAAGGTAACAATTCGGATAT+TGG | + | chr3_4:71047189-71047208 | Msa0519130:CDS | 35.0% | |
AAGATCCATAGGATAGATTG+CGG | - | chr3_4:71047265-71047284 | None:intergenic | 35.0% | |
GAACCCTCACAAAGAATATA+TGG | + | chr3_4:71047340-71047359 | Msa0519130:CDS | 35.0% | |
!!! | TTAATCCTTTTTCAGGCTTC+AGG | + | chr3_4:71047827-71047846 | Msa0519130:intron | 35.0% |
AACAGTTCCGATGCTTATAA+GGG | + | chr3_4:71047861-71047880 | Msa0519130:CDS | 35.0% | |
! | TGTAGAACTTTTCAGCATGA+AGG | + | chr3_4:71047900-71047919 | Msa0519130:CDS | 35.0% |
CAACTTTGAGTAGATTTGGA+AGG | - | chr3_4:71047950-71047969 | None:intergenic | 35.0% | |
TATTACTCCTTTGGGCAATA+TGG | + | chr3_4:71048217-71048236 | Msa0519130:three_prime_UTR | 35.0% | |
ATATTTGCCATATTGCCCAA+AGG | - | chr3_4:71048227-71048246 | None:intergenic | 35.0% | |
AACCAAATCAACACAATGGG+TGG | + | chr3_4:71045192-71045211 | Msa0519130:exon | 40.0% | |
ATCTGCATTGCAAATTCCAG+CGG | + | chr3_4:71045380-71045399 | Msa0519130:CDS | 40.0% | |
CTTGCATATTTATACTCCGC+TGG | - | chr3_4:71045399-71045418 | None:intergenic | 40.0% | |
GTTTGTGATGCCAATAGTGA+TGG | + | chr3_4:71045432-71045451 | Msa0519130:CDS | 40.0% | |
TGATGCCAATAGTGATGGTA+GGG | + | chr3_4:71045437-71045456 | Msa0519130:CDS | 40.0% | |
ATCAACCCTACCATCACTAT+TGG | - | chr3_4:71045445-71045464 | None:intergenic | 40.0% | |
GTATTCTTCCTGAAGAGCTT+TGG | + | chr3_4:71045550-71045569 | Msa0519130:CDS | 40.0% | |
AACCAGCCGAATTCAAACTT+TGG | - | chr3_4:71045827-71045846 | None:intergenic | 40.0% | |
TTCGTGTCAGACACTAAATG+TGG | - | chr3_4:71045857-71045876 | None:intergenic | 40.0% | |
TTTAGTGTCTGACACGAACA+AGG | + | chr3_4:71045859-71045878 | Msa0519130:intron | 40.0% | |
!!! | TACCCAAGTGTTTTTTCCAC+GGG | - | chr3_4:71045891-71045910 | None:intergenic | 40.0% |
CACTCTTCAATTCACTGATC+AGG | + | chr3_4:71046262-71046281 | Msa0519130:intron | 40.0% | |
CAATGCTGCAGGAATAGAAA+TGG | + | chr3_4:71046705-71046724 | Msa0519130:CDS | 40.0% | |
CACGTTGACAAGGACAATAA+TGG | + | chr3_4:71046757-71046776 | Msa0519130:CDS | 40.0% | |
AGAGTGTACCATGTAGACAT+TGG | + | chr3_4:71046865-71046884 | Msa0519130:CDS | 40.0% | |
! | CGGAGCAAATATTTTATCGC+TGG | + | chr3_4:71046931-71046950 | Msa0519130:CDS | 40.0% |
TTTCTGCTGTGACGACAATA+TGG | + | chr3_4:71047046-71047065 | Msa0519130:CDS | 40.0% | |
! | AATATACGGGGATTTTTCCG+AGG | + | chr3_4:71047078-71047097 | Msa0519130:CDS | 40.0% |
TTTGTGAGGGTTCCAAGTTT+AGG | - | chr3_4:71047333-71047352 | None:intergenic | 40.0% | |
ATTGGCATGATTCCTTATGC+TGG | + | chr3_4:71047411-71047430 | Msa0519130:CDS | 40.0% | |
CTCTAGTACAACTAGGATGT+GGG | + | chr3_4:71047629-71047648 | Msa0519130:CDS | 40.0% | |
ATAGACACATGTAGCTCCAA+GGG | - | chr3_4:71047668-71047687 | None:intergenic | 40.0% | |
GAACAGTTCCGATGCTTATA+AGG | + | chr3_4:71047860-71047879 | Msa0519130:CDS | 40.0% | |
! | TTTCAGCATGAAGGCTTTAG+AGG | + | chr3_4:71047909-71047928 | Msa0519130:CDS | 40.0% |
!! | GGCTTTAGAGGTTTCTACAA+AGG | + | chr3_4:71047921-71047940 | Msa0519130:CDS | 40.0% |
GGCACAACTTTGAGTAGATT+TGG | - | chr3_4:71047954-71047973 | None:intergenic | 40.0% | |
ATATAAGTAATGCTCGCAGC+TGG | - | chr3_4:71047975-71047994 | None:intergenic | 40.0% | |
AGCTGCGAGCATTACTTATA+TGG | + | chr3_4:71047974-71047993 | Msa0519130:CDS | 40.0% | |
!! | ACCTAATTGGAAGTACCACA+AGG | - | chr3_4:71048114-71048133 | None:intergenic | 40.0% |
TGTGTTTCAAGAGTCACAGA+AGG | - | chr3_4:71048255-71048274 | None:intergenic | 40.0% | |
! | AAGGGTGACTGACTGCATTT+TGG | - | chr3_4:71044871-71044890 | None:intergenic | 45.0% |
TCTCAGTCCAACATCAGATC+TGG | + | chr3_4:71045101-71045120 | Msa0519130:five_prime_UTR | 45.0% | |
!! | CACCACCCATTGTGTTGATT+TGG | - | chr3_4:71045197-71045216 | None:intergenic | 45.0% |
CAAATCAACACAATGGGTGG+TGG | + | chr3_4:71045195-71045214 | Msa0519130:exon | 45.0% | |
TTCACTAGATCACGTGCTTG+AGG | + | chr3_4:71045248-71045267 | Msa0519130:CDS | 45.0% | |
GTGATGCCAATAGTGATGGT+AGG | + | chr3_4:71045436-71045455 | Msa0519130:CDS | 45.0% | |
!! | AGCTTTGGGATGCTCTTGAT+AGG | + | chr3_4:71045565-71045584 | Msa0519130:CDS | 45.0% |
!! | GCTTTGGGATGCTCTTGATA+GGG | + | chr3_4:71045566-71045585 | Msa0519130:CDS | 45.0% |
AGCCAAAGTTTGAATTCGGC+TGG | + | chr3_4:71045822-71045841 | Msa0519130:intron | 45.0% | |
! | AGTTTGAATTCGGCTGGTTG+AGG | + | chr3_4:71045828-71045847 | Msa0519130:intron | 45.0% |
CTCCCGTGGAAAAAACACTT+GGG | + | chr3_4:71045886-71045905 | Msa0519130:intron | 45.0% | |
!! | GATGGTTCTGACCTTTCTTG+AGG | + | chr3_4:71045939-71045958 | Msa0519130:intron | 45.0% |
ATAAATATAGGGGGAGGGGA+GGG | - | chr3_4:71046026-71046045 | None:intergenic | 45.0% | |
AATAAATATAGGGGGAGGGG+AGG | - | chr3_4:71046027-71046046 | None:intergenic | 45.0% | |
TCTGACCACTGCAGTTATTG+TGG | + | chr3_4:71046602-71046621 | Msa0519130:intron | 45.0% | |
ATGAGCAGTTTCAATGCTGC+AGG | + | chr3_4:71046694-71046713 | Msa0519130:CDS | 45.0% | |
CTTGGTCTCCAATGTCTACA+TGG | - | chr3_4:71046876-71046895 | None:intergenic | 45.0% | |
TGTCTTCAGGAATGACAGCT+TGG | - | chr3_4:71046894-71046913 | None:intergenic | 45.0% | |
ACATTAGCAAGCACGCTAAC+CGG | + | chr3_4:71046911-71046930 | Msa0519130:CDS | 45.0% | |
TTTATCGCTGGAGGAATAGC+AGG | + | chr3_4:71046943-71046962 | Msa0519130:CDS | 45.0% | |
GAATGTTGTGAAGGTAGCAC+CGG | + | chr3_4:71047110-71047129 | Msa0519130:CDS | 45.0% | |
!! | AATTCGGATATTGGTGCTGC+TGG | + | chr3_4:71047198-71047217 | Msa0519130:CDS | 45.0% |
!! | ATTCGGATATTGGTGCTGCT+GGG | + | chr3_4:71047199-71047218 | Msa0519130:CDS | 45.0% |
GGAATCATGCCAATCACAGA+CGG | - | chr3_4:71047405-71047424 | None:intergenic | 45.0% | |
TTTCCCTCCTTCATAGATCC+CGG | + | chr3_4:71047604-71047623 | Msa0519130:intron | 45.0% | |
TCCTAGTTGTACTAGAGGAC+CGG | - | chr3_4:71047626-71047645 | None:intergenic | 45.0% | |
CCACATCCTAGTTGTACTAG+AGG | - | chr3_4:71047631-71047650 | None:intergenic | 45.0% | |
CCTCTAGTACAACTAGGATG+TGG | + | chr3_4:71047628-71047647 | Msa0519130:CDS | 45.0% | |
CTAGGATGTGGGACAATTTC+TGG | + | chr3_4:71047640-71047659 | Msa0519130:CDS | 45.0% | |
GATAGACACATGTAGCTCCA+AGG | - | chr3_4:71047669-71047688 | None:intergenic | 45.0% | |
TACATGTGTCTATCCACTGC+AGG | + | chr3_4:71047675-71047694 | Msa0519130:CDS | 45.0% | |
CTAGTACGAATAACCTGCAG+TGG | - | chr3_4:71047691-71047710 | None:intergenic | 45.0% | |
CACTGCAGGTTATTCGTACT+AGG | + | chr3_4:71047689-71047708 | Msa0519130:CDS | 45.0% | |
TTGTGCCTGAAGCCTGAAAA+AGG | - | chr3_4:71047835-71047854 | None:intergenic | 45.0% | |
CGCATCTAGCTGCTTAGTAT+TGG | + | chr3_4:71048077-71048096 | Msa0519130:three_prime_UTR | 45.0% | |
GCCTTGTGGTACTTCCAATT+AGG | + | chr3_4:71048110-71048129 | Msa0519130:three_prime_UTR | 45.0% | |
!! | TAATAACTTTAAATTAAAAA+GGG | - | chr3_4:71046200-71046219 | None:intergenic | 5.0% |
!! | TTAATAACTTTAAATTAAAA+AGG | - | chr3_4:71046201-71046220 | None:intergenic | 5.0% |
! | GATCACGTGCTTGAGGCATT+AGG | + | chr3_4:71045255-71045274 | Msa0519130:CDS | 50.0% |
! | AGAGCATCCCAAAGCTCTTC+AGG | - | chr3_4:71045561-71045580 | None:intergenic | 50.0% |
!!! | CCAAGTGTTTTTTCCACGGG+AGG | - | chr3_4:71045888-71045907 | None:intergenic | 50.0% |
CCTCCCGTGGAAAAAACACT+TGG | + | chr3_4:71045885-71045904 | Msa0519130:intron | 50.0% | |
CGCATACACCTCTAGTGAGA+AGG | - | chr3_4:71046173-71046192 | None:intergenic | 50.0% | |
CTTTGTGGAGCACGTTGACA+AGG | + | chr3_4:71046747-71046766 | Msa0519130:CDS | 50.0% | |
CATGGTACACTCTCTCCCAA+TGG | - | chr3_4:71046858-71046877 | None:intergenic | 50.0% | |
! | GCGTGCTTGCTAATGTCTTC+AGG | - | chr3_4:71046907-71046926 | None:intergenic | 50.0% |
ATCACCTTCAGACGATCGAG+AGG | - | chr3_4:71046994-71047013 | None:intergenic | 50.0% | |
! | CGGGGATTTTTCCGAGGTAA+TGG | + | chr3_4:71047084-71047103 | Msa0519130:CDS | 50.0% |
GCAGACCGCAATCTATCCTA+TGG | + | chr3_4:71047257-71047276 | Msa0519130:CDS | 50.0% | |
CTACAGACTTGTGCCTCTGA+AGG | + | chr3_4:71047297-71047316 | Msa0519130:CDS | 50.0% | |
! | TTGTGCCTCTGAAGGTGGAA+GGG | + | chr3_4:71047305-71047324 | Msa0519130:CDS | 50.0% |
TCACAGACGGAAGAAGTCCT+CGG | - | chr3_4:71047392-71047411 | None:intergenic | 50.0% | |
GGACTTCTTCCGTCTGTGAT+TGG | + | chr3_4:71047393-71047412 | Msa0519130:CDS | 50.0% | |
GCGAGATCAATGCCAGCATA+AGG | - | chr3_4:71047426-71047445 | None:intergenic | 50.0% | |
TAGAGGACCGGGATCTATGA+AGG | - | chr3_4:71047614-71047633 | None:intergenic | 50.0% | |
CCTAGTTGTACTAGAGGACC+GGG | - | chr3_4:71047625-71047644 | None:intergenic | 50.0% | |
!! | GGGACAATTTCTGGAACCCT+TGG | + | chr3_4:71047649-71047668 | Msa0519130:CDS | 50.0% |
TAAGCAGCTAGATGCGTGTG+GGG | - | chr3_4:71048073-71048092 | None:intergenic | 50.0% | |
CTAAGCAGCTAGATGCGTGT+GGG | - | chr3_4:71048074-71048093 | None:intergenic | 50.0% | |
ACTAAGCAGCTAGATGCGTG+TGG | - | chr3_4:71048075-71048094 | None:intergenic | 50.0% | |
!! | GCTTAGTATTGGCTTAGCCC+TGG | + | chr3_4:71048088-71048107 | Msa0519130:three_prime_UTR | 50.0% |
!! | TTGGAAGTACCACAAGGCCA+GGG | - | chr3_4:71048108-71048127 | None:intergenic | 50.0% |
!! | ATTGGAAGTACCACAAGGCC+AGG | - | chr3_4:71048109-71048128 | None:intergenic | 50.0% |
TGGGATGCTCTTGATAGGGC+TGG | + | chr3_4:71045570-71045589 | Msa0519130:CDS | 55.0% | |
ACGAACAAGGTTACCTCCCG+TGG | + | chr3_4:71045872-71045891 | Msa0519130:intron | 55.0% | |
! | AGAGGAGCTTGCTCGCTTTG+TGG | + | chr3_4:71046732-71046751 | Msa0519130:CDS | 55.0% |
TGCACCTCTCGATCGTCTGA+AGG | + | chr3_4:71046987-71047006 | Msa0519130:CDS | 55.0% | |
! | CAGACTTGTGCCTCTGAAGG+TGG | + | chr3_4:71047300-71047319 | Msa0519130:CDS | 55.0% |
! | CTTGTGCCTCTGAAGGTGGA+AGG | + | chr3_4:71047304-71047323 | Msa0519130:CDS | 55.0% |
GGTGGAAGGGCTCCTAAACT+TGG | + | chr3_4:71047318-71047337 | Msa0519130:CDS | 55.0% | |
AGTCCTCGGTAGAAAGCTCG+AGG | - | chr3_4:71047378-71047397 | None:intergenic | 55.0% | |
GGACCGGGATCTATGAAGGA+GGG | - | chr3_4:71047610-71047629 | None:intergenic | 55.0% | |
AGGACCGGGATCTATGAAGG+AGG | - | chr3_4:71047611-71047630 | None:intergenic | 55.0% | |
CCCGGTCCTCTAGTACAACT+AGG | + | chr3_4:71047622-71047641 | Msa0519130:CDS | 55.0% | |
TAGATGCGTGTGGGGAAACC+AGG | - | chr3_4:71048065-71048084 | None:intergenic | 55.0% | |
GGGAGGGGAGGGAAATTGAG+GGG | - | chr3_4:71046015-71046034 | None:intergenic | 60.0% | |
GGGGAGGGGAGGGAAATTGA+GGG | - | chr3_4:71046016-71046035 | None:intergenic | 60.0% | |
! | ACGATCGAGAGGTGCAGTCG+CGG | - | chr3_4:71046983-71047002 | None:intergenic | 60.0% |
!! | CGGATATTGGTGCTGCTGGG+AGG | + | chr3_4:71047202-71047221 | Msa0519130:CDS | 60.0% |
! | GCTGCTGGGAGGCTTTTAGC+AGG | + | chr3_4:71047213-71047232 | Msa0519130:CDS | 60.0% |
! | GCTGGGAGGCTTTTAGCAGG+TGG | + | chr3_4:71047216-71047235 | Msa0519130:CDS | 60.0% |
! | GAGGCTTTTAGCAGGTGGCG+TGG | + | chr3_4:71047221-71047240 | Msa0519130:CDS | 60.0% |
! | CTTTTAGCAGGTGGCGTGGC+TGG | + | chr3_4:71047225-71047244 | Msa0519130:CDS | 60.0% |
AGGAGCCCTTCCACCTTCAG+AGG | - | chr3_4:71047313-71047332 | None:intergenic | 60.0% | |
GGACCTCGAGCTTTCTACCG+AGG | + | chr3_4:71047372-71047391 | Msa0519130:CDS | 60.0% | |
!! | TTGGCTTAGCCCTGGCCTTG+TGG | + | chr3_4:71048096-71048115 | Msa0519130:three_prime_UTR | 60.0% |
GGGGGAGGGGAGGGAAATTG+AGG | - | chr3_4:71046017-71046036 | None:intergenic | 65.0% | |
TTAGCAGGTGGCGTGGCTGG+TGG | + | chr3_4:71047228-71047247 | Msa0519130:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 71044823 | 71048393 | 71044823 | ID=Msa0519130;Name=Msa0519130 |
chr3_4 | mRNA | 71044823 | 71048393 | 71044823 | ID=Msa0519130-mRNA-1;Parent=Msa0519130;Name=Msa0519130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=384|0.66|0.75|1|1|1|4|359|495 |
chr3_4 | exon | 71044823 | 71045591 | 71044823 | ID=Msa0519130-mRNA-1:exon:19445;Parent=Msa0519130-mRNA-1 |
chr3_4 | exon | 71046680 | 71047498 | 71046680 | ID=Msa0519130-mRNA-1:exon:19446;Parent=Msa0519130-mRNA-1 |
chr3_4 | exon | 71047620 | 71047710 | 71047620 | ID=Msa0519130-mRNA-1:exon:19447;Parent=Msa0519130-mRNA-1 |
chr3_4 | exon | 71047842 | 71048393 | 71047842 | ID=Msa0519130-mRNA-1:exon:19448;Parent=Msa0519130-mRNA-1 |
chr3_4 | five_prime_UTR | 71044823 | 71045206 | 71044823 | ID=Msa0519130-mRNA-1:five_prime_utr;Parent=Msa0519130-mRNA-1 |
chr3_4 | CDS | 71045207 | 71045591 | 71045207 | ID=Msa0519130-mRNA-1:cds;Parent=Msa0519130-mRNA-1 |
chr3_4 | CDS | 71046680 | 71047498 | 71046680 | ID=Msa0519130-mRNA-1:cds;Parent=Msa0519130-mRNA-1 |
chr3_4 | CDS | 71047620 | 71047710 | 71047620 | ID=Msa0519130-mRNA-1:cds;Parent=Msa0519130-mRNA-1 |
chr3_4 | CDS | 71047842 | 71048034 | 71047842 | ID=Msa0519130-mRNA-1:cds;Parent=Msa0519130-mRNA-1 |
chr3_4 | three_prime_UTR | 71048035 | 71048393 | 71048035 | ID=Msa0519130-mRNA-1:three_prime_utr;Parent=Msa0519130-mRNA-1 |
Gene Sequence |
Protein sequence |