Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103240 | XP_024630955.1 | 96.756 | 709 | 23 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103240 | sp|Q9XSC3|WDR44_BOVIN | 35.821 | 335 | 195 | 9 | 253 | 578 | 503 | 826 | 9.76e-54 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103240 | A0A396JHT0 | 96.756 | 709 | 23 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1414 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0103240 | 0.806372 | 8.493247e-50 | -8.615850e-47 |
| Msa0012940 | Msa0103240 | 0.830601 | 2.679776e-55 | -8.615850e-47 |
| Msa0024110 | Msa0103240 | 0.800982 | 1.116246e-48 | -8.615850e-47 |
| Msa0027630 | Msa0103240 | 0.815638 | 8.343023e-52 | -8.615850e-47 |
| Msa0030280 | Msa0103240 | 0.809583 | 1.761525e-50 | -8.615850e-47 |
| Msa0031820 | Msa0103240 | 0.821776 | 3.373779e-53 | -8.615850e-47 |
| Msa0033880 | Msa0103240 | 0.841846 | 3.708545e-58 | -8.615850e-47 |
| Msa0043860 | Msa0103240 | 0.821659 | 3.590653e-53 | -8.615850e-47 |
| Msa0048180 | Msa0103240 | 0.855941 | 4.499497e-62 | -8.615850e-47 |
| Msa0052610 | Msa0103240 | 0.823111 | 1.651803e-53 | -8.615850e-47 |
| Msa0055100 | Msa0103240 | 0.802671 | 5.023056e-49 | -8.615850e-47 |
| Msa0057610 | Msa0103240 | 0.918347 | 1.743473e-86 | -8.615850e-47 |
| Msa0067870 | Msa0103240 | 0.800876 | 1.173200e-48 | -8.615850e-47 |
| Msa0070430 | Msa0103240 | 0.819451 | 1.153351e-52 | -8.615850e-47 |
| Msa0076040 | Msa0103240 | 0.814537 | 1.464730e-51 | -8.615850e-47 |
| Msa0079270 | Msa0103240 | -0.805914 | 1.060546e-49 | -8.615850e-47 |
| Msa0081520 | Msa0103240 | 0.800965 | 1.125096e-48 | -8.615850e-47 |
| Msa0091610 | Msa0103240 | 0.801167 | 1.023079e-48 | -8.615850e-47 |
| Msa0093850 | Msa0103240 | 0.829127 | 6.124819e-55 | -8.615850e-47 |
| Msa0094580 | Msa0103240 | 0.852389 | 4.767283e-61 | -8.615850e-47 |
| Msa0097850 | Msa0103240 | 0.803175 | 3.951307e-49 | -8.615850e-47 |
| Msa0098470 | Msa0103240 | 0.815641 | 8.329349e-52 | -8.615850e-47 |
| Msa0101180 | Msa0103240 | 0.815459 | 9.144074e-52 | -8.615850e-47 |
| Msa0103240 | Msa0113240 | 0.807462 | 4.996235e-50 | -8.615850e-47 |
| Msa0103240 | Msa0115370 | 0.829657 | 4.553165e-55 | -8.615850e-47 |
| Msa0103240 | Msa0118710 | 0.812458 | 4.196972e-51 | -8.615850e-47 |
| Msa0103240 | Msa0123510 | 0.821084 | 4.872345e-53 | -8.615850e-47 |
| Msa0103240 | Msa0125770 | 0.827589 | 1.438924e-54 | -8.615850e-47 |
| Msa0103240 | Msa0126770 | 0.831073 | 2.052592e-55 | -8.615850e-47 |
| Msa0103240 | Msa0127850 | 0.832564 | 8.796885e-56 | -8.615850e-47 |
| Msa0103240 | Msa0128860 | 0.811457 | 6.934598e-51 | -8.615850e-47 |
| Msa0103240 | Msa0130110 | 0.801444 | 8.978104e-49 | -8.615850e-47 |
| Msa0103240 | Msa0130240 | 0.807719 | 4.405844e-50 | -8.615850e-47 |
| Msa0103240 | Msa0138360 | 0.847476 | 1.128948e-59 | -8.615850e-47 |
| Msa0103240 | Msa0147980 | 0.856262 | 3.623419e-62 | -8.615850e-47 |
| Msa0103240 | Msa0165240 | 0.803070 | 4.154118e-49 | -8.615850e-47 |
| Msa0103240 | Msa0165440 | 0.800549 | 1.368310e-48 | -8.615850e-47 |
| Msa0103240 | Msa0166460 | 0.808644 | 2.798238e-50 | -8.615850e-47 |
| Msa0103240 | Msa0166750 | 0.825065 | 5.742490e-54 | -8.615850e-47 |
| Msa0103240 | Msa0167480 | 0.844788 | 6.084156e-59 | -8.615850e-47 |
| Msa0103240 | Msa0171850 | 0.838230 | 3.252968e-57 | -8.615850e-47 |
| Msa0103240 | Msa0173890 | 0.823690 | 1.209423e-53 | -8.615850e-47 |
| Msa0103240 | Msa0174000 | 0.837826 | 4.133114e-57 | -8.615850e-47 |
| Msa0103240 | Msa0174730 | 0.810719 | 1.002391e-50 | -8.615850e-47 |
| Msa0103240 | Msa0181610 | 0.821255 | 4.449511e-53 | -8.615850e-47 |
| Msa0103240 | Msa0188350 | 0.814703 | 1.345811e-51 | -8.615850e-47 |
| Msa0103240 | Msa0188890 | 0.807686 | 4.477679e-50 | -8.615850e-47 |
| Msa0103240 | Msa0191080 | 0.835120 | 2.019333e-56 | -8.615850e-47 |
| Msa0103240 | Msa0192480 | 0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa0103240 | Msa0194560 | 0.803021 | 4.252847e-49 | -8.615850e-47 |
| Msa0103240 | Msa0206690 | 0.833690 | 4.613373e-56 | -8.615850e-47 |
| Msa0103240 | Msa0214550 | 0.816010 | 6.893034e-52 | -8.615850e-47 |
| Msa0103240 | Msa0218830 | 0.818949 | 1.500527e-52 | -8.615850e-47 |
| Msa0103240 | Msa0221600 | 0.809394 | 1.933590e-50 | -8.615850e-47 |
| Msa0103240 | Msa0226330 | 0.800974 | 1.120421e-48 | -8.615850e-47 |
| Msa0103240 | Msa0226460 | 0.846482 | 2.112648e-59 | -8.615850e-47 |
| Msa0103240 | Msa0230520 | 0.828387 | 9.250249e-55 | -8.615850e-47 |
| Msa0103240 | Msa0231100 | 0.805324 | 1.410048e-49 | -8.615850e-47 |
| Msa0103240 | Msa0231380 | 0.807474 | 4.965591e-50 | -8.615850e-47 |
| Msa0103240 | Msa0241830 | 0.839039 | 2.011048e-57 | -8.615850e-47 |
| Msa0103240 | Msa0244980 | 0.809100 | 2.235417e-50 | -8.615850e-47 |
| Msa0103240 | Msa0245060 | 0.801215 | 1.000230e-48 | -8.615850e-47 |
| Msa0103240 | Msa0245430 | 0.801444 | 8.978104e-49 | -8.615850e-47 |
| Msa0103240 | Msa0245580 | 0.825671 | 4.127906e-54 | -8.615850e-47 |
| Msa0103240 | Msa0249540 | 0.828976 | 6.663414e-55 | -8.615850e-47 |
| Msa0103240 | Msa0249580 | 0.812343 | 4.446861e-51 | -8.615850e-47 |
| Msa0103240 | Msa0254940 | 0.838491 | 2.787187e-57 | -8.615850e-47 |
| Msa0103240 | Msa0257490 | 0.813374 | 2.644264e-51 | -8.615850e-47 |
| Msa0103240 | Msa0262480 | 0.823808 | 1.134530e-53 | -8.615850e-47 |
| Msa0103240 | Msa0269470 | 0.801458 | 8.919614e-49 | -8.615850e-47 |
| Msa0103240 | Msa0270660 | 0.805207 | 1.491989e-49 | -8.615850e-47 |
| Msa0103240 | Msa0277450 | 0.815399 | 9.430428e-52 | -8.615850e-47 |
| Msa0103240 | Msa0279850 | 0.807915 | 4.002477e-50 | -8.615850e-47 |
| Msa0103240 | Msa0281530 | 0.809257 | 2.069625e-50 | -8.615850e-47 |
| Msa0103240 | Msa0296250 | 0.872465 | 3.115252e-67 | -8.615850e-47 |
| Msa0103240 | Msa0296790 | 0.818326 | 2.078216e-52 | -8.615850e-47 |
| Msa0103240 | Msa0304590 | 0.824137 | 9.499637e-54 | -8.615850e-47 |
| Msa0103240 | Msa0304660 | 0.834463 | 2.953738e-56 | -8.615850e-47 |
| Msa0103240 | Msa0305780 | 0.828204 | 1.023896e-54 | -8.615850e-47 |
| Msa0103240 | Msa0317970 | 0.804651 | 1.950429e-49 | -8.615850e-47 |
| Msa0103240 | Msa0320590 | 0.828143 | 1.058823e-54 | -8.615850e-47 |
| Msa0103240 | Msa0322240 | 0.818048 | 2.402516e-52 | -8.615850e-47 |
| Msa0103240 | Msa0322900 | 0.813848 | 2.078872e-51 | -8.615850e-47 |
| Msa0103240 | Msa0326590 | 0.831074 | 2.051632e-55 | -8.615850e-47 |
| Msa0103240 | Msa0331700 | 0.835191 | 1.936926e-56 | -8.615850e-47 |
| Msa0103240 | Msa0332640 | 0.819583 | 1.076346e-52 | -8.615850e-47 |
| Msa0103240 | Msa0341690 | 0.833158 | 6.260713e-56 | -8.615850e-47 |
| Msa0103240 | Msa0348830 | 0.842067 | 3.243050e-58 | -8.615850e-47 |
| Msa0103240 | Msa0359040 | 0.820506 | 6.617045e-53 | -8.615850e-47 |
| Msa0103240 | Msa0370160 | -0.802336 | 5.888769e-49 | -8.615850e-47 |
| Msa0103240 | Msa0375710 | 0.805911 | 1.061840e-49 | -8.615850e-47 |
| Msa0103240 | Msa0376820 | 0.801304 | 9.589939e-49 | -8.615850e-47 |
| Msa0103240 | Msa0384670 | 0.809177 | 2.152280e-50 | -8.615850e-47 |
| Msa0103240 | Msa0384880 | 0.819223 | 1.300361e-52 | -8.615850e-47 |
| Msa0103240 | Msa0389510 | 0.811212 | 7.836296e-51 | -8.615850e-47 |
| Msa0103240 | Msa0405650 | 0.809680 | 1.678808e-50 | -8.615850e-47 |
| Msa0103240 | Msa0408240 | -0.819117 | 1.374504e-52 | -8.615850e-47 |
| Msa0103240 | Msa0419720 | 0.829199 | 5.883089e-55 | -8.615850e-47 |
| Msa0103240 | Msa0423750 | 0.855841 | 4.811199e-62 | -8.615850e-47 |
| Msa0103240 | Msa0431770 | 0.810027 | 1.413275e-50 | -8.615850e-47 |
| Msa0103240 | Msa0434570 | 0.815375 | 9.547976e-52 | -8.615850e-47 |
| Msa0103240 | Msa0434770 | 0.819736 | 9.928168e-53 | -8.615850e-47 |
| Msa0103240 | Msa0439230 | 0.801770 | 7.697342e-49 | -8.615850e-47 |
| Msa0103240 | Msa0443390 | 0.850562 | 1.567534e-60 | -8.615850e-47 |
| Msa0103240 | Msa0470530 | 0.844448 | 7.512150e-59 | -8.615850e-47 |
| Msa0103240 | Msa0478580 | 0.832265 | 1.043198e-55 | -8.615850e-47 |
| Msa0103240 | Msa0479200 | 0.834405 | 3.054346e-56 | -8.615850e-47 |
| Msa0103240 | Msa0484740 | 0.804306 | 2.301852e-49 | -8.615850e-47 |
| Msa0103240 | Msa0503630 | -0.800429 | 1.447323e-48 | -8.615850e-47 |
| Msa0103240 | Msa0511770 | 0.846617 | 1.941063e-59 | -8.615850e-47 |
| Msa0103240 | Msa0515640 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
| Msa0103240 | Msa0518030 | 0.826827 | 2.190579e-54 | -8.615850e-47 |
| Msa0103240 | Msa0526540 | 0.824405 | 8.215989e-54 | -8.615850e-47 |
| Msa0103240 | Msa0527020 | 0.835522 | 1.597463e-56 | -8.615850e-47 |
| Msa0103240 | Msa0527150 | 0.849409 | 3.294234e-60 | -8.615850e-47 |
| Msa0103240 | Msa0527190 | 0.829778 | 4.254864e-55 | -8.615850e-47 |
| Msa0103240 | Msa0531250 | 0.829298 | 5.565968e-55 | -8.615850e-47 |
| Msa0103240 | Msa0534750 | 0.841011 | 6.152914e-58 | -8.615850e-47 |
| Msa0103240 | Msa0547020 | 0.807387 | 5.181735e-50 | -8.615850e-47 |
| Msa0103240 | Msa0547990 | 0.829777 | 4.257869e-55 | -8.615850e-47 |
| Msa0103240 | Msa0561430 | 0.824556 | 7.570902e-54 | -8.615850e-47 |
| Msa0103240 | Msa0576940 | 0.815131 | 1.081958e-51 | -8.615850e-47 |
| Msa0103240 | Msa0580230 | 0.818051 | 2.397796e-52 | -8.615850e-47 |
| Msa0103240 | Msa0581070 | 0.807283 | 5.451414e-50 | -8.615850e-47 |
| Msa0103240 | Msa0584550 | 0.825313 | 5.017000e-54 | -8.615850e-47 |
| Msa0103240 | Msa0593700 | 0.840698 | 7.435860e-58 | -8.615850e-47 |
| Msa0103240 | Msa0615580 | 0.813825 | 2.104265e-51 | -8.615850e-47 |
| Msa0103240 | Msa0619860 | 0.831077 | 2.048212e-55 | -8.615850e-47 |
| Msa0103240 | Msa0620990 | 0.803683 | 3.100458e-49 | -8.615850e-47 |
| Msa0103240 | Msa0628420 | 0.829773 | 4.266898e-55 | -8.615850e-47 |
| Msa0103240 | Msa0631250 | 0.835555 | 1.567285e-56 | -8.615850e-47 |
| Msa0103240 | Msa0633570 | 0.835590 | 1.535416e-56 | -8.615850e-47 |
| Msa0103240 | Msa0638480 | 0.841326 | 5.086027e-58 | -8.615850e-47 |
| Msa0103240 | Msa0640500 | 0.806295 | 8.819168e-50 | -8.615850e-47 |
| Msa0103240 | Msa0644030 | 0.826526 | 2.584614e-54 | -8.615850e-47 |
| Msa0103240 | Msa0647430 | 0.822844 | 1.906331e-53 | -8.615850e-47 |
| Msa0103240 | Msa0654870 | 0.825024 | 5.873257e-54 | -8.615850e-47 |
| Msa0103240 | Msa0659990 | 0.809694 | 1.667529e-50 | -8.615850e-47 |
| Msa0103240 | Msa0666230 | 0.880396 | 5.683789e-70 | -8.615850e-47 |
| Msa0103240 | Msa0669520 | 0.802560 | 5.294543e-49 | -8.615850e-47 |
| Msa0103240 | Msa0672100 | 0.828869 | 7.073598e-55 | -8.615850e-47 |
| Msa0103240 | Msa0679100 | 0.828199 | 1.026645e-54 | -8.615850e-47 |
| Msa0103240 | Msa0683780 | 0.826257 | 2.996405e-54 | -8.615850e-47 |
| Msa0103240 | Msa0690310 | 0.814959 | 1.180940e-51 | -8.615850e-47 |
| Msa0103240 | Msa0704660 | 0.862375 | 5.297512e-64 | -8.615850e-47 |
| Msa0103240 | Msa0706500 | 0.831384 | 1.721217e-55 | -8.615850e-47 |
| Msa0103240 | Msa0716410 | 0.812861 | 3.425793e-51 | -8.615850e-47 |
| Msa0103240 | Msa0719400 | 0.800685 | 1.283649e-48 | -8.615850e-47 |
| Msa0103240 | Msa0738040 | 0.800395 | 1.470880e-48 | -8.615850e-47 |
| Msa0103240 | Msa0738100 | 0.800826 | 1.201323e-48 | -8.615850e-47 |
| Msa0103240 | Msa0745200 | 0.814119 | 1.811804e-51 | -8.615850e-47 |
| Msa0103240 | Msa0780930 | 0.849865 | 2.457189e-60 | -8.615850e-47 |
| Msa0103240 | Msa0785130 | 0.820268 | 7.503423e-53 | -8.615850e-47 |
| Msa0103240 | Msa0788770 | 0.806836 | 6.780103e-50 | -8.615850e-47 |
| Msa0103240 | Msa0790610 | 0.806649 | 7.422788e-50 | -8.615850e-47 |
| Msa0103240 | Msa0794050 | 0.806557 | 7.762002e-50 | -8.615850e-47 |
| Msa0103240 | Msa0808800 | 0.840987 | 6.242568e-58 | -8.615850e-47 |
| Msa0103240 | Msa0818770 | 0.819506 | 1.120677e-52 | -8.615850e-47 |
| Msa0103240 | Msa0819540 | 0.814925 | 1.201630e-51 | -8.615850e-47 |
| Msa0103240 | Msa0824640 | 0.824038 | 1.002428e-53 | -8.615850e-47 |
| Msa0103240 | Msa0833190 | -0.823807 | 1.135301e-53 | -8.615850e-47 |
| Msa0103240 | Msa0864010 | 0.822462 | 2.339042e-53 | -8.615850e-47 |
| Msa0103240 | Msa0884290 | 0.800259 | 1.567347e-48 | -8.615850e-47 |
| Msa0103240 | Msa0898760 | 0.800251 | 1.572973e-48 | -8.615850e-47 |
| Msa0103240 | Msa0906780 | 0.824257 | 8.904317e-54 | -8.615850e-47 |
| Msa0103240 | Msa0928120 | 0.837307 | 5.614861e-57 | -8.615850e-47 |
| Msa0103240 | Msa0943170 | 0.822867 | 1.882021e-53 | -8.615850e-47 |
| Msa0103240 | Msa0944200 | 0.818148 | 2.279723e-52 | -8.615850e-47 |
| Msa0103240 | Msa0944610 | 0.814662 | 1.374574e-51 | -8.615850e-47 |
| Msa0103240 | Msa0960830 | 0.835172 | 1.958305e-56 | -8.615850e-47 |
| Msa0103240 | Msa0963020 | 0.832457 | 9.349787e-56 | -8.615850e-47 |
| Msa0103240 | Msa0994290 | 0.821469 | 3.971363e-53 | -8.615850e-47 |
| Msa0103240 | Msa0997430 | 0.833029 | 6.743816e-56 | -8.615850e-47 |
| Msa0103240 | Msa1019240 | 0.835693 | 1.446784e-56 | -8.615850e-47 |
| Msa0103240 | Msa1019260 | 0.827679 | 1.369678e-54 | -8.615850e-47 |
| Msa0103240 | Msa1030930 | 0.831271 | 1.835147e-55 | -8.615850e-47 |
| Msa0103240 | Msa1040580 | 0.802261 | 6.099912e-49 | -8.615850e-47 |
| Msa0103240 | Msa1055010 | 0.807558 | 4.765651e-50 | -8.615850e-47 |
| Msa0103240 | Msa1070050 | 0.821730 | 3.457216e-53 | -8.615850e-47 |
| Msa0103240 | Msa1070390 | 0.838017 | 3.690355e-57 | -8.615850e-47 |
| Msa0103240 | Msa1076560 | 0.828211 | 1.019611e-54 | -8.615850e-47 |
| Msa0103240 | Msa1079230 | 0.839409 | 1.611900e-57 | -8.615850e-47 |
| Msa0103240 | Msa1083880 | 0.818067 | 2.377906e-52 | -8.615850e-47 |
| Msa0103240 | Msa1089450 | 0.812379 | 4.367877e-51 | -8.615850e-47 |
| Msa0103240 | Msa1104140 | 0.800099 | 1.689349e-48 | -8.615850e-47 |
| Msa0103240 | Msa1104210 | 0.827393 | 1.604081e-54 | -8.615850e-47 |
| Msa0103240 | Msa1117550 | 0.811249 | 7.693243e-51 | -8.615850e-47 |
| Msa0103240 | Msa1123350 | 0.811891 | 5.579205e-51 | -8.615850e-47 |
| Msa0103240 | Msa1124110 | 0.807589 | 4.695791e-50 | -8.615850e-47 |
| Msa0103240 | Msa1127540 | 0.810965 | 8.865865e-51 | -8.615850e-47 |
| Msa0103240 | Msa1127590 | 0.861311 | 1.121522e-63 | -8.615850e-47 |
| Msa0103240 | Msa1131170 | 0.813432 | 2.567870e-51 | -8.615850e-47 |
| Msa0103240 | Msa1131560 | 0.833578 | 4.921141e-56 | -8.615850e-47 |
| Msa0103240 | Msa1143650 | 0.815917 | 7.232185e-52 | -8.615850e-47 |
| Msa0103240 | Msa1145240 | 0.843321 | 1.505628e-58 | -8.615850e-47 |
| Msa0103240 | Msa1158230 | 0.801268 | 9.756461e-49 | -8.615850e-47 |
| Msa0103240 | Msa1165780 | 0.826424 | 2.733446e-54 | -8.615850e-47 |
| Msa0103240 | Msa1166870 | 0.849845 | 2.489574e-60 | -8.615850e-47 |
| Msa0103240 | Msa1168950 | 0.814622 | 1.402720e-51 | -8.615850e-47 |
| Msa0103240 | Msa1169040 | 0.830312 | 3.153097e-55 | -8.615850e-47 |
| Msa0103240 | Msa1172640 | 0.807398 | 5.155302e-50 | -8.615850e-47 |
| Msa0103240 | Msa1174530 | 0.805125 | 1.552035e-49 | -8.615850e-47 |
| Msa0103240 | Msa1175350 | 0.800340 | 1.509302e-48 | -8.615850e-47 |
| Msa0103240 | Msa1179980 | 0.814495 | 1.496179e-51 | -8.615850e-47 |
| Msa0103240 | Msa1184370 | 0.808922 | 2.440376e-50 | -8.615850e-47 |
| Msa0103240 | Msa1186530 | 0.815526 | 8.838848e-52 | -8.615850e-47 |
| Msa0103240 | Msa1192850 | 0.829977 | 3.805879e-55 | -8.615850e-47 |
| Msa0103240 | Msa1201830 | 0.802588 | 5.225169e-49 | -8.615850e-47 |
| Msa0103240 | Msa1202580 | 0.845958 | 2.934260e-59 | -8.615850e-47 |
| Msa0103240 | Msa1204830 | 0.805187 | 1.506553e-49 | -8.615850e-47 |
| Msa0103240 | Msa1206090 | 0.850023 | 2.220227e-60 | -8.615850e-47 |
| Msa0103240 | Msa1208020 | 0.831488 | 1.622541e-55 | -8.615850e-47 |
| Msa0103240 | Msa1225660 | 0.818812 | 1.612268e-52 | -8.615850e-47 |
| Msa0103240 | Msa1226610 | 0.811444 | 6.981013e-51 | -8.615850e-47 |
| Msa0103240 | Msa1227460 | 0.814414 | 1.559575e-51 | -8.615850e-47 |
| Msa0103240 | Msa1227640 | 0.810899 | 9.163624e-51 | -8.615850e-47 |
| Msa0103240 | Msa1227690 | 0.830380 | 3.033989e-55 | -8.615850e-47 |
| Msa0103240 | Msa1230580 | 0.836690 | 8.071443e-57 | -8.615850e-47 |
| Msa0103240 | Msa1235250 | 0.816959 | 4.225123e-52 | -8.615850e-47 |
| Msa0103240 | Msa1252850 | -0.806430 | 8.256709e-50 | -8.615850e-47 |
| Msa0103240 | Msa1256770 | 0.825315 | 5.013568e-54 | -8.615850e-47 |
| Msa0103240 | Msa1256950 | 0.829167 | 5.988532e-55 | -8.615850e-47 |
| Msa0103240 | Msa1262890 | 0.845698 | 3.453557e-59 | -8.615850e-47 |
| Msa0103240 | Msa1265440 | 0.818437 | 1.961218e-52 | -8.615850e-47 |
| Msa0103240 | Msa1265590 | 0.801484 | 8.808995e-49 | -8.615850e-47 |
| Msa0103240 | Msa1270420 | 0.817390 | 3.380550e-52 | -8.615850e-47 |
| Msa0103240 | Msa1270620 | 0.820083 | 8.273069e-53 | -8.615850e-47 |
| Msa0103240 | Msa1270690 | 0.814675 | 1.365579e-51 | -8.615850e-47 |
| Msa0103240 | Msa1278900 | 0.806513 | 7.930027e-50 | -8.615850e-47 |
| Msa0103240 | Msa1279140 | -0.812185 | 4.815136e-51 | -8.615850e-47 |
| Msa0103240 | Msa1297800 | 0.825998 | 3.451447e-54 | -8.615850e-47 |
| Msa0103240 | Msa1297970 | 0.805639 | 1.211391e-49 | -8.615850e-47 |
| Msa0103240 | Msa1298050 | 0.803218 | 3.871380e-49 | -8.615850e-47 |
| Msa0103240 | Msa1306990 | 0.810978 | 8.808165e-51 | -8.615850e-47 |
| Msa0103240 | Msa1307600 | 0.805197 | 1.499628e-49 | -8.615850e-47 |
| Msa0103240 | Msa1310690 | 0.820566 | 6.408933e-53 | -8.615850e-47 |
| Msa0103240 | Msa1321680 | 0.806216 | 9.160661e-50 | -8.615850e-47 |
| Msa0103240 | Msa1327490 | 0.828482 | 8.771070e-55 | -8.615850e-47 |
| Msa0103240 | Msa1329510 | 0.810874 | 9.279405e-51 | -8.615850e-47 |
| Msa0103240 | Msa1329540 | 0.867941 | 9.439704e-66 | -8.615850e-47 |
| Msa0103240 | Msa1331250 | 0.857993 | 1.117743e-62 | -8.615850e-47 |
| Msa0103240 | Msa1333890 | 0.808382 | 3.183132e-50 | -8.615850e-47 |
| Msa0103240 | Msa1349570 | 0.817469 | 3.244280e-52 | -8.615850e-47 |
| Msa0103240 | Msa1351540 | 0.814725 | 1.331194e-51 | -8.615850e-47 |
| Msa0103240 | Msa1358480 | 0.805018 | 1.634173e-49 | -8.615850e-47 |
| Msa0103240 | Msa1359270 | 0.809262 | 2.063523e-50 | -8.615850e-47 |
| Msa0103240 | Msa1362420 | 0.808798 | 2.594454e-50 | -8.615850e-47 |
| Msa0103240 | Msa1363330 | 0.819351 | 1.215626e-52 | -8.615850e-47 |
| Msa0103240 | Msa1369150 | 0.807753 | 4.333820e-50 | -8.615850e-47 |
| Msa0103240 | Msa1369190 | 0.830417 | 2.972247e-55 | -8.615850e-47 |
| Msa0103240 | Msa1371520 | 0.827690 | 1.361118e-54 | -8.615850e-47 |
| Msa0103240 | Msa1373820 | 0.866341 | 3.059770e-65 | -8.615850e-47 |
| Msa0103240 | Msa1379760 | 0.812550 | 4.007190e-51 | -8.615850e-47 |
| Msa0103240 | Msa1380970 | 0.801408 | 9.134090e-49 | -8.615850e-47 |
| Msa0103240 | Msa1386600 | 0.819078 | 1.402909e-52 | -8.615850e-47 |
| Msa0103240 | Msa1386710 | 0.815853 | 7.473597e-52 | -8.615850e-47 |
| Msa0103240 | Msa1411950 | 0.841708 | 4.034337e-58 | -8.615850e-47 |
| Msa0103240 | Msa1413180 | 0.833783 | 4.373000e-56 | -8.615850e-47 |
| Msa0103240 | Msa1429500 | 0.832598 | 8.627706e-56 | -8.615850e-47 |
| Msa0103240 | Msa1432480 | 0.806688 | 7.283208e-50 | -8.615850e-47 |
| Msa0103240 | Msa1438050 | 0.826444 | 2.703144e-54 | -8.615850e-47 |
| Msa0103240 | Msa1442850 | 0.836822 | 7.470532e-57 | -8.615850e-47 |
| Msa0103240 | Msa1443930 | 0.817788 | 2.749608e-52 | -8.615850e-47 |
| Msa0103240 | Msa1450280 | 0.809448 | 1.882864e-50 | -8.615850e-47 |
| Msa0103240 | Msa1454450 | 0.809324 | 2.001379e-50 | -8.615850e-47 |
| Msa0103240 | Msa1459960 | 0.802700 | 4.954533e-49 | -8.615850e-47 |
| Msa0103240 | Msa1461490 | 0.803777 | 2.965339e-49 | -8.615850e-47 |
| Msa0103240 | Msa1462860 | 0.818849 | 1.581760e-52 | -8.615850e-47 |
| Msa0103240 | Msa1465080 | 0.814636 | 1.393035e-51 | -8.615850e-47 |
| Msa0103240 | Msa1465260 | 0.801556 | 8.515528e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103240 | MtrunA17_Chr1g0146771 | 96.756 | 709 | 23 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1414 |
| Msa0103240 | MtrunA17_Chr3g0127171 | 62.534 | 726 | 227 | 14 | 1 | 707 | 1 | 700 | 0.0 | 857 |
| Msa0103240 | MtrunA17_Chr8g0388841 | 45.254 | 727 | 350 | 12 | 8 | 707 | 7 | 712 | 0.0 | 581 |
| Msa0103240 | MtrunA17_Chr8g0384061 | 36.176 | 680 | 333 | 16 | 50 | 709 | 47 | 645 | 3.76e-124 | 384 |
| Msa0103240 | MtrunA17_Chr2g0317931 | 41.493 | 576 | 260 | 17 | 196 | 709 | 298 | 858 | 8.74e-123 | 387 |
| Msa0103240 | MtrunA17_Chr3g0129821 | 44.742 | 485 | 236 | 11 | 233 | 709 | 168 | 628 | 3.48e-120 | 373 |
| Msa0103240 | MtrunA17_Chr7g0238321 | 46.917 | 373 | 187 | 6 | 234 | 595 | 394 | 766 | 2.40e-92 | 308 |
| Msa0103240 | MtrunA17_Chr1g0185501 | 27.119 | 236 | 152 | 8 | 338 | 566 | 48 | 270 | 2.11e-17 | 84.0 |
| Msa0103240 | MtrunA17_Chr4g0067151 | 26.482 | 253 | 152 | 9 | 251 | 487 | 19 | 253 | 2.91e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103240 | AT5G24320.1 | 48.767 | 730 | 293 | 20 | 10 | 707 | 12 | 692 | 0.0 | 611 |
| Msa0103240 | AT5G24320.2 | 48.774 | 734 | 291 | 21 | 10 | 707 | 12 | 696 | 0.0 | 610 |
| Msa0103240 | AT5G53500.2 | 48.801 | 709 | 293 | 17 | 6 | 707 | 7 | 652 | 0.0 | 596 |
| Msa0103240 | AT5G53500.1 | 48.801 | 709 | 293 | 17 | 6 | 707 | 7 | 652 | 0.0 | 596 |
| Msa0103240 | AT5G42010.1 | 49.074 | 540 | 236 | 14 | 186 | 707 | 189 | 707 | 7.41e-162 | 484 |
| Msa0103240 | AT1G64610.2 | 48.381 | 525 | 224 | 12 | 191 | 707 | 160 | 645 | 5.80e-158 | 471 |
| Msa0103240 | AT1G64610.1 | 48.381 | 525 | 224 | 12 | 191 | 707 | 160 | 645 | 5.80e-158 | 471 |
| Msa0103240 | AT5G42010.2 | 52.589 | 367 | 165 | 5 | 186 | 548 | 189 | 550 | 2.01e-127 | 390 |
| Msa0103240 | AT5G54200.1 | 44.467 | 497 | 250 | 11 | 232 | 709 | 336 | 825 | 2.32e-124 | 390 |
| Msa0103240 | AT3G15470.1 | 40.497 | 563 | 277 | 11 | 194 | 709 | 332 | 883 | 7.07e-120 | 380 |
| Msa0103240 | AT1G48870.2 | 39.666 | 479 | 228 | 12 | 231 | 706 | 170 | 590 | 1.89e-98 | 315 |
| Msa0103240 | AT1G48870.3 | 39.666 | 479 | 228 | 12 | 231 | 706 | 170 | 590 | 1.89e-98 | 315 |
| Msa0103240 | AT1G48870.1 | 39.666 | 479 | 228 | 12 | 231 | 706 | 170 | 590 | 1.89e-98 | 315 |
| Msa0103240 | AT5G02430.1 | 39.768 | 518 | 263 | 11 | 232 | 706 | 384 | 895 | 1.87e-96 | 318 |
| Msa0103240 | AT2G37670.2 | 39.539 | 521 | 261 | 12 | 234 | 706 | 380 | 894 | 8.62e-93 | 308 |
| Msa0103240 | AT2G37670.1 | 39.539 | 521 | 261 | 12 | 234 | 706 | 379 | 893 | 9.67e-93 | 308 |
| Msa0103240 | AT3G49660.1 | 24.224 | 322 | 171 | 11 | 253 | 567 | 18 | 273 | 1.38e-18 | 87.8 |
| Msa0103240 | AT2G16405.1 | 22.881 | 236 | 166 | 4 | 348 | 567 | 199 | 434 | 5.14e-12 | 69.3 |
Find 230 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACAACAACCATTCAAATT+TGG | 0.091286 | 1_3:+10377052 | Msa0103240:three_prime_UTR |
| AGCTTCCACTTTCGGATTTC+AGG | 0.117373 | 1_3:+10376301 | Msa0103240:three_prime_UTR |
| GGAATTGACACCCTTGTTTA+TGG | 0.143018 | 1_3:+10374024 | Msa0103240:CDS |
| AAAAGATGTATTGGAAAATT+AGG | 0.159611 | 1_3:+10377018 | Msa0103240:three_prime_UTR |
| CTTATACAGGTAGGGATTAT+TGG | 0.170811 | 1_3:+10374772 | Msa0103240:intron |
| GAGGGTTTGCTGAGAGATTT+TGG | 0.182081 | 1_3:+10373200 | Msa0103240:CDS |
| TCCATGAATTCTTCAGAATT+TGG | 0.194639 | 1_3:+10373455 | Msa0103240:CDS |
| CACAACAACCATTCAAATTT+GGG | 0.196552 | 1_3:+10377053 | Msa0103240:three_prime_UTR |
| AAGAGGAATAACCGGCTTTC+AGG | 0.207009 | 1_3:+10375186 | Msa0103240:CDS |
| CTTACATAGATGTTGATATT+TGG | 0.215064 | 1_3:-10372537 | None:intergenic |
| TACATCCTGTATTTACTTTA+CGG | 0.216260 | 1_3:+10373988 | Msa0103240:CDS |
| GTATTTGTGGATTTAATTAT+TGG | 0.219386 | 1_3:+10376660 | Msa0103240:three_prime_UTR |
| TGGTCATGGAGGTGAAATTT+TGG | 0.235145 | 1_3:+10374159 | Msa0103240:CDS |
| CTTGAGGTGACCTCTTATTT+AGG | 0.243028 | 1_3:-10375767 | None:intergenic |
| TTCTTTGTTTCTTGCATTGA+CGG | 0.263293 | 1_3:-10373787 | None:intergenic |
| GGAACTTTCAGCTCTTTATA+TGG | 0.266044 | 1_3:+10373811 | Msa0103240:CDS |
| AAAGATGTATTGGAAAATTA+GGG | 0.288038 | 1_3:+10377019 | Msa0103240:three_prime_UTR |
| CAGACAAAGAGATTCTAAAT+TGG | 0.289557 | 1_3:-10376692 | None:intergenic |
| ATGAGTCTATTATCCATTCT+AGG | 0.289743 | 1_3:-10376081 | None:intergenic |
| AAATTAATAATTGTATAAAA+TGG | 0.301595 | 1_3:+10376993 | Msa0103240:three_prime_UTR |
| AAAGTGGATGGAATTGAGTT+TGG | 0.304155 | 1_3:+10373280 | Msa0103240:CDS |
| GTGTTTCATTCTCTGGTTGT+AGG | 0.305208 | 1_3:+10373747 | Msa0103240:CDS |
| TTCTTCAGAATTTGGTGCTT+TGG | 0.317391 | 1_3:+10373463 | Msa0103240:CDS |
| TAGTTGAACAGTTGCAGTTT+TGG | 0.318320 | 1_3:+10376792 | Msa0103240:three_prime_UTR |
| TCCTAAGGTCTTCCGTTTGA+TGG | 0.319986 | 1_3:+10374114 | Msa0103240:CDS |
| ATACAGGATGTATCAACTTC+TGG | 0.321898 | 1_3:-10373977 | None:intergenic |
| CGCATCTGTTGCAGTACCTT+GGG | 0.326050 | 1_3:+10375698 | Msa0103240:CDS |
| GGATAAGTTGCGGAACCTTT+CGG | 0.326663 | 1_3:-10375852 | None:intergenic |
| TAATCTTTCTATCCATTTCA+TGG | 0.330130 | 1_3:+10376716 | Msa0103240:three_prime_UTR |
| GAGAATGTTCCAATCTTTCA+TGG | 0.333666 | 1_3:+10372453 | Msa0103240:five_prime_UTR |
| CTTGTTTGAAGGTTATTTAA+TGG | 0.334055 | 1_3:+10373040 | Msa0103240:five_prime_UTR |
| TTGATAAAACTGTTCGTCTA+TGG | 0.334885 | 1_3:+10374350 | Msa0103240:CDS |
| TTTGGATCAGTCAGTGGTTT+CGG | 0.338155 | 1_3:+10373532 | Msa0103240:CDS |
| CTGATTGTCATGTTGTTGAT+TGG | 0.342478 | 1_3:+10374625 | Msa0103240:CDS |
| CAATCACAACTATGCTTACT+TGG | 0.344066 | 1_3:+10375145 | Msa0103240:CDS |
| GACAACCCTGAAGTTGATTC+TGG | 0.347739 | 1_3:+10373164 | Msa0103240:CDS |
| TGGTGCTTTGGTGGAGAATT+CGG | 0.352335 | 1_3:+10373475 | Msa0103240:CDS |
| ATAAAATCATTCCACAATTA+CGG | 0.355391 | 1_3:+10376023 | Msa0103240:CDS |
| ACCAAATTCTGAAGAATTCA+TGG | 0.356917 | 1_3:-10373456 | None:intergenic |
| ACCAGTTACCAGCATGAGTT+TGG | 0.360497 | 1_3:+10373587 | Msa0103240:CDS |
| TTCATTAGCGGATCAATAGA+TGG | 0.362082 | 1_3:+10374579 | Msa0103240:CDS |
| GACACCCTTGTTTATGGATA+AGG | 0.363962 | 1_3:+10374030 | Msa0103240:CDS |
| AGTTGATTCTGGTCCTCCTT+TGG | 0.373369 | 1_3:+10373175 | Msa0103240:CDS |
| AAGTTTACTGTGAGATAAAA+TGG | 0.377542 | 1_3:+10376628 | Msa0103240:three_prime_UTR |
| GGAGGACCAGAATCAACTTC+AGG | 0.378263 | 1_3:-10373170 | None:intergenic |
| TTGTTTGAAGGTTATTTAAT+GGG | 0.380231 | 1_3:+10373041 | Msa0103240:five_prime_UTR |
| TGTGGATTTAATTATTGGTT+GGG | 0.380495 | 1_3:+10376665 | Msa0103240:three_prime_UTR |
| AACCTTGAGAATTCGGTAGA+TGG | 0.380774 | 1_3:+10373311 | Msa0103240:CDS |
| TAGATGGAAAAGTGCGCATA+TGG | 0.387508 | 1_3:+10374595 | Msa0103240:CDS |
| TGATGGAGTGGAAGTAGGTT+TGG | 0.393251 | 1_3:+10373514 | Msa0103240:CDS |
| ACCAAACTCATGCTGGTAAC+TGG | 0.395389 | 1_3:-10373588 | None:intergenic |
| CGATGTCCTTGGAAAATTGC+TGG | 0.396375 | 1_3:+10376142 | Msa0103240:three_prime_UTR |
| CTTCCAACCTCAGGCATTTG+AGG | 0.402300 | 1_3:-10376745 | None:intergenic |
| GAACTTTCAGCTCTTTATAT+GGG | 0.405806 | 1_3:+10373812 | Msa0103240:CDS |
| CAAATCCATAATTGAGGAAA+AGG | 0.406650 | 1_3:-10376111 | None:intergenic |
| CTTGCTAGTGCCGGCGAAGA+TGG | 0.410754 | 1_3:+10373899 | Msa0103240:CDS |
| AAAATGGTCAAAAGATGTAT+TGG | 0.416019 | 1_3:+10377009 | Msa0103240:three_prime_UTR |
| CTTTATACCCCAAATTTGAA+TGG | 0.421731 | 1_3:-10377061 | None:intergenic |
| GAAGACGGTGTTTCATTCTC+TGG | 0.423222 | 1_3:+10373740 | Msa0103240:CDS |
| TTCTGGTCCTCCTTTGGTGG+AGG | 0.423302 | 1_3:+10373181 | Msa0103240:CDS |
| TTGTGGATTTAATTATTGGT+TGG | 0.423828 | 1_3:+10376664 | Msa0103240:three_prime_UTR |
| CATATTCCTGTGTGAGGTAA+AGG | 0.424782 | 1_3:-10376442 | None:intergenic |
| TGAATTGTGGACCAGGAGTC+CGG | 0.426510 | 1_3:+10373226 | Msa0103240:CDS |
| CGCCGGCACTAGCAAGATAC+TGG | 0.427472 | 1_3:-10373892 | None:intergenic |
| TGATTCTGGTCCTCCTTTGG+TGG | 0.429534 | 1_3:+10373178 | Msa0103240:CDS |
| TTCAGAATTTGGTGCTTTGG+TGG | 0.430345 | 1_3:+10373466 | Msa0103240:CDS |
| TCTTCTGGAAGAGGAATAAC+CGG | 0.432558 | 1_3:+10375178 | Msa0103240:CDS |
| TCTGGTCCTCCTTTGGTGGA+GGG | 0.438960 | 1_3:+10373182 | Msa0103240:CDS |
| AAACCACTTCATGAGTTTCA+TGG | 0.440737 | 1_3:+10374139 | Msa0103240:CDS |
| AACAAGGAGAATCTGATAAC+AGG | 0.441398 | 1_3:+10373711 | Msa0103240:CDS |
| GCTTCCACTTTCGGATTTCA+GGG | 0.441836 | 1_3:+10376302 | Msa0103240:three_prime_UTR |
| TTGCTTCGGCACGATGTCCT+TGG | 0.442056 | 1_3:+10376131 | Msa0103240:three_prime_UTR |
| TCCATCAAACGGAAGACCTT+AGG | 0.442471 | 1_3:-10374115 | None:intergenic |
| AGGAATGATGGAGTGGAAGT+AGG | 0.444491 | 1_3:+10373509 | Msa0103240:CDS |
| CCTCAATTATGGATTTGCTT+CGG | 0.447776 | 1_3:+10376117 | Msa0103240:three_prime_UTR |
| AGAAATTATACCTGTCCATC+AGG | 0.448537 | 1_3:-10374687 | None:intergenic |
| ACCTTTGACTGCAGCCTGCT+CGG | 0.454623 | 1_3:-10376225 | None:intergenic |
| TAGACCCCATGCATGACAAT+TGG | 0.455729 | 1_3:-10375970 | None:intergenic |
| TTGTAGGATTCAGCGAGTTA+AGG | 0.455745 | 1_3:+10373763 | Msa0103240:CDS |
| GAGGTTGGAAGGGTGATGAT+TGG | 0.456034 | 1_3:+10376757 | Msa0103240:three_prime_UTR |
| AGTAATCGTGACTGCTGGTT+GGG | 0.456343 | 1_3:+10375992 | Msa0103240:CDS |
| TTGAGGGTCCTACCATGAAA+TGG | 0.461904 | 1_3:-10376728 | None:intergenic |
| TAGCTGATTGTTACAGCCTA+TGG | 0.464034 | 1_3:+10376859 | Msa0103240:three_prime_UTR |
| GTGCTATCGGCCTGATGGAC+AGG | 0.464270 | 1_3:+10374677 | Msa0103240:CDS |
| GAAAGTGGTCTTTCCTAGAA+TGG | 0.464886 | 1_3:+10376068 | Msa0103240:three_prime_UTR |
| AGAATTCGGCATGCGAAGAT+AGG | 0.469347 | 1_3:+10373489 | Msa0103240:CDS |
| TTCCAACCTCAGGCATTTGA+GGG | 0.475560 | 1_3:-10376744 | None:intergenic |
| AAGCAGCAACCATGAAAGAT+TGG | 0.475958 | 1_3:-10372462 | None:intergenic |
| AAAGACCACTTTCATTTCAA+AGG | 0.478965 | 1_3:-10376058 | None:intergenic |
| GGTGAGGAGTTCGAGGGGAC+AGG | 0.481217 | 1_3:+10373608 | Msa0103240:CDS |
| ATTCACCGTAAAGTAAATAC+AGG | 0.481895 | 1_3:-10373993 | None:intergenic |
| GGGATTATTGGCTCCATGAC+AGG | 0.482718 | 1_3:+10374784 | Msa0103240:CDS |
| CTTTACGGTGAATGATCTCT+CGG | 0.483120 | 1_3:+10374003 | Msa0103240:CDS |
| TACTTCCAATTGTCATGCAT+GGG | 0.483434 | 1_3:+10375965 | Msa0103240:CDS |
| CTTTCTATCCATTTCATGGT+AGG | 0.483978 | 1_3:+10376720 | Msa0103240:three_prime_UTR |
| AGGTTGGAAGGGTGATGATT+GGG | 0.484257 | 1_3:+10376758 | Msa0103240:three_prime_UTR |
| CTTCATGAGTTTCATGGTCA+TGG | 0.484621 | 1_3:+10374145 | Msa0103240:CDS |
| CAATCAACAACATGACAATC+AGG | 0.489078 | 1_3:-10374624 | None:intergenic |
| CATATATCAGTACATGGAAA+AGG | 0.490002 | 1_3:+10376490 | Msa0103240:three_prime_UTR |
| ATAACTTTGTTAAAATCTTG+TGG | 0.491780 | 1_3:-10375324 | None:intergenic |
| CTTTCATTTCAAAGGAGTAC+AGG | 0.491830 | 1_3:-10376050 | None:intergenic |
| GATGATGATTATTTCATTAG+CGG | 0.495396 | 1_3:+10374567 | Msa0103240:CDS |
| ATCATCACCCTTCCAACCTC+AGG | 0.495542 | 1_3:-10376754 | None:intergenic |
| ACGCATCTGTTGCAGTACCT+TGG | 0.499424 | 1_3:+10375697 | Msa0103240:CDS |
| GTGAGATAAAATGGTGGTGG+GGG | 0.500289 | 1_3:+10376637 | Msa0103240:three_prime_UTR |
| GCTCCATGACAGGCAATTGT+CGG | 0.502618 | 1_3:+10374794 | Msa0103240:CDS |
| CTCAAATGCCTGAGGTTGGA+AGG | 0.502744 | 1_3:+10376746 | Msa0103240:three_prime_UTR |
| GAGATTCATTCAAGAGGAAG+TGG | 0.507765 | 1_3:+10376602 | Msa0103240:three_prime_UTR |
| GCAGTATTTGCTGTCATCGT+CGG | 0.510836 | 1_3:+10374327 | Msa0103240:intron |
| GAAGTAGGAAGTTTCTCCTC+GGG | 0.512166 | 1_3:-10375873 | None:intergenic |
| ATCGTGACTGCTGGTTGGGA+TGG | 0.512730 | 1_3:+10375996 | Msa0103240:CDS |
| GAGGACCAGAATCAACTTCA+GGG | 0.513061 | 1_3:-10373169 | None:intergenic |
| TTGTCACCGCAGTGTGCTAT+CGG | 0.513075 | 1_3:+10374664 | Msa0103240:CDS |
| CTAGCAAGATACTGGCCGTC+CGG | 0.518249 | 1_3:-10373884 | None:intergenic |
| AAGATTGTGTCTTGAAAGTG+AGG | 0.519750 | 1_3:-10372498 | None:intergenic |
| CAAAGTCATATATCAGTACA+TGG | 0.523365 | 1_3:+10376484 | Msa0103240:three_prime_UTR |
| GTACTCCTTTGAAATGAAAG+TGG | 0.524216 | 1_3:+10376053 | Msa0103240:exon |
| AATTGGATGTCCTAAATAAG+AGG | 0.531200 | 1_3:+10375757 | Msa0103240:CDS |
| TGAGTTTGGTGAGGAGTTCG+AGG | 0.532574 | 1_3:+10373601 | Msa0103240:CDS |
| GACCCTCAAATGCCTGAGGT+TGG | 0.534183 | 1_3:+10376742 | Msa0103240:three_prime_UTR |
| GAATTGTGGACCAGGAGTCC+GGG | 0.534742 | 1_3:+10373227 | Msa0103240:CDS |
| ACTGTGAGATAAAATGGTGG+TGG | 0.534754 | 1_3:+10376634 | Msa0103240:three_prime_UTR |
| GAGATTAATAGAATGAAAGA+TGG | 0.537127 | 1_3:+10373356 | Msa0103240:CDS |
| TGGTTAAGTGTTGATTGTCT+TGG | 0.539097 | 1_3:+10376403 | Msa0103240:three_prime_UTR |
| TAGTAATCGTGACTGCTGGT+TGG | 0.539202 | 1_3:+10375991 | Msa0103240:CDS |
| GCATGCGAAGATAGGAATGA+TGG | 0.541227 | 1_3:+10373497 | Msa0103240:CDS |
| ATGAAATAATCATCATCCAC+AGG | 0.541795 | 1_3:-10374561 | None:intergenic |
| AATCCCCTGAAATCCGAAAG+TGG | 0.541990 | 1_3:-10376306 | None:intergenic |
| ACCGAGCAGGCTGCAGTCAA+AGG | 0.543883 | 1_3:+10376224 | Msa0103240:three_prime_UTR |
| TCTAACACTACCCGGACTCC+TGG | 0.545596 | 1_3:-10373237 | None:intergenic |
| TCAACTTCGACAGCATCAAA+AGG | 0.547195 | 1_3:+10376198 | Msa0103240:three_prime_UTR |
| TTCCATCTACCGAATTCTCA+AGG | 0.548317 | 1_3:-10373313 | None:intergenic |
| TCACAAGTCAGAATCATTGA+AGG | 0.548563 | 1_3:+10375363 | Msa0103240:CDS |
| GGCCAGTATCTTGCTAGTGC+CGG | 0.549193 | 1_3:+10373890 | Msa0103240:CDS |
| GAAGTGGTTTCTCCATCAAA+CGG | 0.549389 | 1_3:-10374126 | None:intergenic |
| GAGTAAGTTTATAAAGTGGA+TGG | 0.549532 | 1_3:+10373268 | Msa0103240:CDS |
| GCAGTGTGCTATCGGCCTGA+TGG | 0.550180 | 1_3:+10374672 | Msa0103240:CDS |
| GTAGGAGTAAGTTTATAAAG+TGG | 0.551153 | 1_3:+10373264 | Msa0103240:CDS |
| AAACCGACAATTGCCTGTCA+TGG | 0.552139 | 1_3:-10374797 | None:intergenic |
| GTACTTCCAATTGTCATGCA+TGG | 0.556893 | 1_3:+10375964 | Msa0103240:CDS |
| TCGTGACTGCTGGTTGGGAT+GGG | 0.557894 | 1_3:+10375997 | Msa0103240:CDS |
| TTACTCTTAGGGCTTGAAGT+AGG | 0.562824 | 1_3:-10375888 | None:intergenic |
| TGTGGAATGTTAGTGACGAC+GGG | 0.565541 | 1_3:+10375622 | Msa0103240:CDS |
| AACTGTTCGTCTATGGCAAG+TGG | 0.567280 | 1_3:+10374357 | Msa0103240:CDS |
| CTCAGCAAACCCTCCACCAA+AGG | 0.567962 | 1_3:-10373191 | None:intergenic |
| TTTATCCTTATCCATAAACA+AGG | 0.568961 | 1_3:-10374035 | None:intergenic |
| CTGTGAGATAAAATGGTGGT+GGG | 0.569280 | 1_3:+10376635 | Msa0103240:three_prime_UTR |
| CATCAAAAGGATAACCGAGC+AGG | 0.571167 | 1_3:+10376211 | Msa0103240:three_prime_UTR |
| ACTCCTCACCAAACTCATGC+TGG | 0.572712 | 1_3:-10373595 | None:intergenic |
| ACTTATCAGTTCATGACAAG+TGG | 0.577251 | 1_3:+10376335 | Msa0103240:three_prime_UTR |
| TATTTGGATTCTATTCCGAA+AGG | 0.577615 | 1_3:+10375837 | Msa0103240:CDS |
| CTGTGGAATGTTAGTGACGA+CGG | 0.578440 | 1_3:+10375621 | Msa0103240:CDS |
| CTTCCACTTTCGGATTTCAG+GGG | 0.578833 | 1_3:+10376303 | Msa0103240:three_prime_UTR |
| AAGATGGAATTGTGCGATTG+TGG | 0.579171 | 1_3:+10373915 | Msa0103240:CDS |
| TTGGATATGAATTGTGGACC+AGG | 0.579478 | 1_3:+10373219 | Msa0103240:CDS |
| TCAATGCAAGAAACAAAGAA+AGG | 0.579785 | 1_3:+10373790 | Msa0103240:CDS |
| TGAAGTAGGAAGTTTCTCCT+CGG | 0.582779 | 1_3:-10375874 | None:intergenic |
| GGAAAAGAGATTCATTCAAG+AGG | 0.583390 | 1_3:+10376596 | Msa0103240:three_prime_UTR |
| ATTAATAGAATGAAAGATGG+TGG | 0.583671 | 1_3:+10373359 | Msa0103240:CDS |
| CTTACAAAAGCATATCTGAT+GGG | 0.584862 | 1_3:-10376514 | None:intergenic |
| CCGAAGCAAATCCATAATTG+AGG | 0.584931 | 1_3:-10376117 | None:intergenic |
| ATCAAACGGAAGACCTTAGG+AGG | 0.585403 | 1_3:-10374112 | None:intergenic |
| GTGTCAATCTCAGATGCAAA+TGG | 0.586470 | 1_3:+10373134 | Msa0103240:CDS |
| ATATACATTTGAGTCTTCAC+AGG | 0.587540 | 1_3:-10375598 | None:intergenic |
| GAATAAGAAGCACAATGGCT+AGG | 0.588859 | 1_3:+10373066 | Msa0103240:exon |
| AATATGCTGGCCCTTAAAAG+AGG | 0.589814 | 1_3:+10376459 | Msa0103240:three_prime_UTR |
| TACCTCACACAGGAATATGC+TGG | 0.589840 | 1_3:+10376446 | Msa0103240:three_prime_UTR |
| AGATGGAAAAGTGCGCATAT+GGG | 0.590347 | 1_3:+10374596 | Msa0103240:CDS |
| CTACGCTCTCTAACACTACC+CGG | 0.590841 | 1_3:-10373245 | None:intergenic |
| GCGATTGTGGCAAGTTGTTG+AGG | 0.591064 | 1_3:+10373928 | Msa0103240:CDS |
| CACAAGTCAGAATCATTGAA+GGG | 0.591839 | 1_3:+10375364 | Msa0103240:CDS |
| CGGGTAGTGTTAGAGAGCGT+AGG | 0.595315 | 1_3:+10373246 | Msa0103240:CDS |
| TCTGTTGCAGTACCTTGGGG+TGG | 0.600067 | 1_3:+10375702 | Msa0103240:CDS |
| GTTTGAGTCGTGGACAAAGA+GGG | 0.600126 | 1_3:+10373634 | Msa0103240:CDS |
| TTTCTCCTCGGGATAAGTTG+CGG | 0.600952 | 1_3:-10375862 | None:intergenic |
| GGATCAAGGCATACAGCTTG+AGG | 0.601512 | 1_3:-10375783 | None:intergenic |
| TCTTACAAAAGCATATCTGA+TGG | 0.602893 | 1_3:-10376515 | None:intergenic |
| TCTGACTTGTGAATCAGCAC+AGG | 0.603387 | 1_3:-10375352 | None:intergenic |
| TCGCACAATTCCATCTTCGC+CGG | 0.604000 | 1_3:-10373909 | None:intergenic |
| TGAGATAAAATGGTGGTGGG+GGG | 0.604223 | 1_3:+10376638 | Msa0103240:three_prime_UTR |
| GTACAGGTAATCCGTAATTG+TGG | 0.604825 | 1_3:-10376034 | None:intergenic |
| AGTAGGTTTGGATCAGTCAG+TGG | 0.606958 | 1_3:+10373526 | Msa0103240:CDS |
| AGCAAACCCTCCACCAAAGG+AGG | 0.608011 | 1_3:-10373188 | None:intergenic |
| GGTCTAGTAATCGTGACTGC+TGG | 0.608692 | 1_3:+10375987 | Msa0103240:CDS |
| TGACCATGAAACTCATGAAG+TGG | 0.609680 | 1_3:-10374142 | None:intergenic |
| TCAAATGCCTGAGGTTGGAA+GGG | 0.610065 | 1_3:+10376747 | Msa0103240:three_prime_UTR |
| GTTTGAAAAGAACCGCTCGC+AGG | 0.610721 | 1_3:-10375676 | None:intergenic |
| GAGTTTGGTGAGGAGTTCGA+GGG | 0.610769 | 1_3:+10373602 | Msa0103240:CDS |
| ACAACAACCATTCAAATTTG+GGG | 0.613858 | 1_3:+10377054 | Msa0103240:three_prime_UTR |
| GCGTTCAATGACATGCATGA+TGG | 0.613983 | 1_3:+10373682 | Msa0103240:CDS |
| TGTGAGATAAAATGGTGGTG+GGG | 0.615276 | 1_3:+10376636 | Msa0103240:three_prime_UTR |
| AAAACTGCAACTGTTCAACT+AGG | 0.617753 | 1_3:-10376790 | None:intergenic |
| TGAATCTGTGAACGCTGCTG+AGG | 0.618609 | 1_3:+10373556 | Msa0103240:CDS |
| ACTATGAAATTTAGTCCGGA+CGG | 0.619533 | 1_3:+10373869 | Msa0103240:CDS |
| TGTTTGAGTCGTGGACAAAG+AGG | 0.619572 | 1_3:+10373633 | Msa0103240:CDS |
| GATAACAGGAAGCACGAAGA+CGG | 0.624901 | 1_3:+10373725 | Msa0103240:CDS |
| AGTACTGTAGCAGTAGCCAT+AGG | 0.629548 | 1_3:-10376875 | None:intergenic |
| TTATCCTTATCCATAAACAA+GGG | 0.630847 | 1_3:-10374034 | None:intergenic |
| CGAAGATAGGAATGATGGAG+TGG | 0.631147 | 1_3:+10373502 | Msa0103240:CDS |
| TCCATCCGAAGTAAAAGATG+CGG | 0.632163 | 1_3:-10375559 | None:intergenic |
| AAGACTCAAATGTATATCTG+TGG | 0.633398 | 1_3:+10375604 | Msa0103240:CDS |
| GGCCAGCATATTCCTGTGTG+AGG | 0.643577 | 1_3:-10376448 | None:intergenic |
| TTACAAAAGCATATCTGATG+GGG | 0.644230 | 1_3:-10376513 | None:intergenic |
| GGACAGGTATGTTTGAGTCG+TGG | 0.645058 | 1_3:+10373624 | Msa0103240:CDS |
| TGTCTGTATATATAGTTTGG+GGG | 0.647581 | 1_3:+10372970 | Msa0103240:intron |
| GGCAAGTTGTTGAGGATGAG+AGG | 0.647793 | 1_3:+10373936 | Msa0103240:CDS |
| AGAGAGAAACACACACAGAG+AGG | 0.648774 | 1_3:+10372424 | Msa0103240:five_prime_UTR |
| AAGATGTATTGGAAAATTAG+GGG | 0.649648 | 1_3:+10377020 | Msa0103240:three_prime_UTR |
| TCAGATTTCAAACCACCCCA+AGG | 0.650854 | 1_3:-10375714 | None:intergenic |
| ATGCATACAATTCAATCCTG+TGG | 0.653407 | 1_3:+10374545 | Msa0103240:CDS |
| ACTGTTCGTCTATGGCAAGT+GGG | 0.654097 | 1_3:+10374358 | Msa0103240:CDS |
| GCATCTGTTGCAGTACCTTG+GGG | 0.656255 | 1_3:+10375699 | Msa0103240:CDS |
| GACAAGTGGCTTCACGACCG+TGG | 0.657340 | 1_3:+10376349 | Msa0103240:three_prime_UTR |
| TTACCAGCATGAGTTTGGTG+AGG | 0.658249 | 1_3:+10373592 | Msa0103240:CDS |
| AAATTGCCTTTACCTCACAC+AGG | 0.665763 | 1_3:+10376436 | Msa0103240:three_prime_UTR |
| TGGAAGGGTGATGATTGGGA+TGG | 0.670015 | 1_3:+10376762 | Msa0103240:three_prime_UTR |
| AGTGGATTACATTAGAACCA+CGG | 0.670913 | 1_3:-10376366 | None:intergenic |
| TGTTGATTGGACTGACGTCA+AGG | 0.671513 | 1_3:+10374638 | Msa0103240:CDS |
| CATGAGTTTCATGGTCATGG+AGG | 0.673674 | 1_3:+10374148 | Msa0103240:CDS |
| AGTAGTGTGAGCAAAAGTCA+TGG | 0.676316 | 1_3:+10373383 | Msa0103240:CDS |
| AGGTTCCGCAACTTATCCCG+AGG | 0.678766 | 1_3:+10375857 | Msa0103240:CDS |
| ACTTCCAATTGTCATGCATG+GGG | 0.679789 | 1_3:+10375966 | Msa0103240:CDS |
| GTAGGACCCTCAAATGCCTG+AGG | 0.688180 | 1_3:+10376738 | Msa0103240:three_prime_UTR |
| TTTACTGTGAGATAAAATGG+TGG | 0.702614 | 1_3:+10376631 | Msa0103240:three_prime_UTR |
| CAAGATATTCAAGCGCACGA+AGG | 0.706142 | 1_3:+10373836 | Msa0103240:CDS |
| AGTTTGGTGAGGAGTTCGAG+GGG | 0.707819 | 1_3:+10373603 | Msa0103240:CDS |
| GGGTTGAATAAGAAGCACAA+TGG | 0.710264 | 1_3:+10373061 | Msa0103240:exon |
| TGCATGATGGATGTACAACA+AGG | 0.718046 | 1_3:+10373695 | Msa0103240:CDS |
| AGAAGATTAAGTCCTGCGAG+CGG | 0.742727 | 1_3:+10375664 | Msa0103240:CDS |
| ATCAGGCCGATAGCACACTG+CGG | 0.805171 | 1_3:-10374670 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATCAATTAATTAACTA+CGG | - | chr1_3:10375288-10375307 | None:intergenic | 10.0% |
| !!! | TACAATTATTAATTTTACAA+AGG | - | chr1_3:10376988-10377007 | None:intergenic | 10.0% |
| !!! | TTTTTAACGAAAATTCAAAA+GGG | - | chr1_3:10372671-10372690 | None:intergenic | 15.0% |
| !!! | ATTTTTAACGAAAATTCAAA+AGG | - | chr1_3:10372672-10372691 | None:intergenic | 15.0% |
| !!! | TGATTTTTGTGATAAAAAAT+TGG | + | chr1_3:10372794-10372813 | Msa0103240:intron | 15.0% |
| !!! | GATTTTTGTGATAAAAAATT+GGG | + | chr1_3:10372795-10372814 | Msa0103240:intron | 15.0% |
| !! | CTAAATTTCATAGTAAAAAT+TGG | - | chr1_3:10373863-10373882 | None:intergenic | 15.0% |
| !! | TTCAAAATTCTATGAAAAAT+TGG | + | chr1_3:10374269-10374288 | Msa0103240:intron | 15.0% |
| !!! | CATTGAAAATTCTAAAAAAT+TGG | + | chr1_3:10375740-10375759 | Msa0103240:CDS | 15.0% |
| !!! | ATTTTTAAGGTTTATTGAAG+AGG | - | chr1_3:10372581-10372600 | None:intergenic | 20.0% |
| !! | TTTCGTTAAAAATATCTTGA+TGG | + | chr1_3:10372679-10372698 | Msa0103240:intron | 20.0% |
| !! | TTCGTTAAAAATATCTTGAT+GGG | + | chr1_3:10372680-10372699 | Msa0103240:intron | 20.0% |
| !! | TTGTTTGAAGGTTATTTAAT+GGG | + | chr1_3:10373041-10373060 | Msa0103240:five_prime_UTR | 20.0% |
| !!! | TTTTACTATGAAATTTAGTC+CGG | + | chr1_3:10373865-10373884 | Msa0103240:CDS | 20.0% |
| !! | TGAAAAATTGGAAATTGATT+TGG | + | chr1_3:10374281-10374300 | Msa0103240:intron | 20.0% |
| !! | TAATTTCTTTACATTTCCTT+CGG | + | chr1_3:10374702-10374721 | Msa0103240:intron | 20.0% |
| !!! | CAATTTTCTCAAACTATTAT+CGG | + | chr1_3:10374966-10374985 | Msa0103240:intron | 20.0% |
| !!! | AAATTTGTTTTGTGAAAAGA+GGG | + | chr1_3:10375063-10375082 | Msa0103240:intron | 20.0% |
| !! | ATAACTTTGTTAAAATCTTG+TGG | - | chr1_3:10375327-10375346 | None:intergenic | 20.0% |
| !!! | ACAAGATTTTAACAAAGTTA+TGG | + | chr1_3:10375326-10375345 | Msa0103240:CDS | 20.0% |
| !! | AAAAGTCAAATTAGATAGAT+AGG | - | chr1_3:10375468-10375487 | None:intergenic | 20.0% |
| !! | TAGAATCCAAATAAAAATCT+TGG | - | chr1_3:10375830-10375849 | None:intergenic | 20.0% |
| !! | ATAAAATCATTCCACAATTA+CGG | + | chr1_3:10376023-10376042 | Msa0103240:CDS | 20.0% |
| !! | GTATTTGTGGATTTAATTAT+TGG | + | chr1_3:10376660-10376679 | Msa0103240:three_prime_UTR | 20.0% |
| !! | AAAAGATGTATTGGAAAATT+AGG | + | chr1_3:10377018-10377037 | Msa0103240:three_prime_UTR | 20.0% |
| !! | AAAGATGTATTGGAAAATTA+GGG | + | chr1_3:10377019-10377038 | Msa0103240:three_prime_UTR | 20.0% |
| ! | CTTACATAGATGTTGATATT+TGG | - | chr1_3:10372540-10372559 | None:intergenic | 25.0% |
| ! | GAAGAGGAAAAAAAAAACAT+GGG | - | chr1_3:10372565-10372584 | None:intergenic | 25.0% |
| ! | TGAAGAGGAAAAAAAAAACA+TGG | - | chr1_3:10372566-10372585 | None:intergenic | 25.0% |
| ! | AAATGAAAATTGTACTTCGT+TGG | - | chr1_3:10372618-10372637 | None:intergenic | 25.0% |
| ! | TTGTGTCTGTATATATAGTT+TGG | + | chr1_3:10372967-10372986 | Msa0103240:intron | 25.0% |
| ! | TGTGTCTGTATATATAGTTT+GGG | + | chr1_3:10372968-10372987 | Msa0103240:intron | 25.0% |
| !! | AAAAAATGTTGCTTGTTTGA+AGG | + | chr1_3:10373029-10373048 | Msa0103240:five_prime_UTR | 25.0% |
| ! | CTTGTTTGAAGGTTATTTAA+TGG | + | chr1_3:10373040-10373059 | Msa0103240:five_prime_UTR | 25.0% |
| ! | GAGATTAATAGAATGAAAGA+TGG | + | chr1_3:10373356-10373375 | Msa0103240:CDS | 25.0% |
| ! | ATTAATAGAATGAAAGATGG+TGG | + | chr1_3:10373359-10373378 | Msa0103240:CDS | 25.0% |
| ! | TACATCCTGTATTTACTTTA+CGG | + | chr1_3:10373988-10374007 | Msa0103240:CDS | 25.0% |
| ! | TTATCCTTATCCATAAACAA+GGG | - | chr1_3:10374037-10374056 | None:intergenic | 25.0% |
| ! | TTTATCCTTATCCATAAACA+AGG | - | chr1_3:10374038-10374057 | None:intergenic | 25.0% |
| ! | AATACATAAGAAGAACAGAA+AGG | - | chr1_3:10374438-10374457 | None:intergenic | 25.0% |
| !!! | TTAGCTTTAACTTCTTGTTT+TGG | + | chr1_3:10374465-10374484 | Msa0103240:intron | 25.0% |
| ! | GATGATGATTATTTCATTAG+CGG | + | chr1_3:10374567-10374586 | Msa0103240:CDS | 25.0% |
| !! | TGAATTTGTTTACCTTATAC+AGG | + | chr1_3:10374759-10374778 | Msa0103240:intron | 25.0% |
| !!! | CAAATTTGTTTTGTGAAAAG+AGG | + | chr1_3:10375062-10375081 | Msa0103240:intron | 25.0% |
| ! | GAACTTAATTGGTGTAAAAA+AGG | - | chr1_3:10375232-10375251 | None:intergenic | 25.0% |
| ! | AAAAGACAACAGAACTTAAT+TGG | - | chr1_3:10375243-10375262 | None:intergenic | 25.0% |
| ! | AATGTCGTTGAAAAATTCAA+AGG | + | chr1_3:10375390-10375409 | Msa0103240:CDS | 25.0% |
| !!! | CATTTCATGTTTTAAGTCTA+AGG | + | chr1_3:10375493-10375512 | Msa0103240:intron | 25.0% |
| !! | TCTAAGCCAAGATTTTTATT+TGG | + | chr1_3:10375821-10375840 | Msa0103240:CDS | 25.0% |
| !!! | GTGAAGATTTTTTACTCTTA+GGG | - | chr1_3:10375902-10375921 | None:intergenic | 25.0% |
| !!! | AGTGAAGATTTTTTACTCTT+AGG | - | chr1_3:10375903-10375922 | None:intergenic | 25.0% |
| ! | AAGTTTACTGTGAGATAAAA+TGG | + | chr1_3:10376628-10376647 | Msa0103240:three_prime_UTR | 25.0% |
| ! | TTGTGGATTTAATTATTGGT+TGG | + | chr1_3:10376664-10376683 | Msa0103240:three_prime_UTR | 25.0% |
| !! | TGTGGATTTAATTATTGGTT+GGG | + | chr1_3:10376665-10376684 | Msa0103240:three_prime_UTR | 25.0% |
| ! | TAATCTTTCTATCCATTTCA+TGG | + | chr1_3:10376716-10376735 | Msa0103240:three_prime_UTR | 25.0% |
| !! | CTGTATATAGTCTCATTTTA+AGG | + | chr1_3:10376928-10376947 | Msa0103240:three_prime_UTR | 25.0% |
| ! | AAAATGGTCAAAAGATGTAT+TGG | + | chr1_3:10377009-10377028 | Msa0103240:three_prime_UTR | 25.0% |
| ! | AAGATGTATTGGAAAATTAG+GGG | + | chr1_3:10377020-10377039 | Msa0103240:three_prime_UTR | 25.0% |
| ! | CTTTTCGTGTTACAAAACAT+GGG | + | chr1_3:10372720-10372739 | Msa0103240:intron | 30.0% |
| TCATTGTTCTTTGTAAGACT+TGG | + | chr1_3:10372820-10372839 | Msa0103240:intron | 30.0% | |
| ! | TTTGTAAGACTTGGTTCAAT+GGG | + | chr1_3:10372829-10372848 | Msa0103240:intron | 30.0% |
| GTGTCTGTATATATAGTTTG+GGG | + | chr1_3:10372969-10372988 | Msa0103240:intron | 30.0% | |
| TGTCTGTATATATAGTTTGG+GGG | + | chr1_3:10372970-10372989 | Msa0103240:intron | 30.0% | |
| !!! | CAACATTTTTTCAAGCTAGT+GGG | - | chr1_3:10373020-10373039 | None:intergenic | 30.0% |
| ! | GAGATTTTGGATATGAATTG+TGG | + | chr1_3:10373213-10373232 | Msa0103240:CDS | 30.0% |
| GTAGGAGTAAGTTTATAAAG+TGG | + | chr1_3:10373264-10373283 | Msa0103240:CDS | 30.0% | |
| GAGTAAGTTTATAAAGTGGA+TGG | + | chr1_3:10373268-10373287 | Msa0103240:CDS | 30.0% | |
| TCAGAAAAACCTTGAGAATT+CGG | + | chr1_3:10373304-10373323 | Msa0103240:CDS | 30.0% | |
| TCCATGAATTCTTCAGAATT+TGG | + | chr1_3:10373455-10373474 | Msa0103240:CDS | 30.0% | |
| ! | ACCAAATTCTGAAGAATTCA+TGG | - | chr1_3:10373459-10373478 | None:intergenic | 30.0% |
| ! | TTCTTTGTTTCTTGCATTGA+CGG | - | chr1_3:10373790-10373809 | None:intergenic | 30.0% |
| TCAATGCAAGAAACAAAGAA+AGG | + | chr1_3:10373790-10373809 | Msa0103240:CDS | 30.0% | |
| GAACTTTCAGCTCTTTATAT+GGG | + | chr1_3:10373812-10373831 | Msa0103240:CDS | 30.0% | |
| ATTCACCGTAAAGTAAATAC+AGG | - | chr1_3:10373996-10374015 | None:intergenic | 30.0% | |
| !! | TGAATCTGATGTCTTTTTCA+GGG | - | chr1_3:10374077-10374096 | None:intergenic | 30.0% |
| TTGATAAAACTGTTCGTCTA+TGG | + | chr1_3:10374350-10374369 | Msa0103240:CDS | 30.0% | |
| ATGAAATAATCATCATCCAC+AGG | - | chr1_3:10374564-10374583 | None:intergenic | 30.0% | |
| GGAAGAAATGAAGATTCTAT+GGG | + | chr1_3:10374723-10374742 | Msa0103240:intron | 30.0% | |
| TTTGTTTACCTTATACAGGT+AGG | + | chr1_3:10374763-10374782 | Msa0103240:intron | 30.0% | |
| TTGTTTACCTTATACAGGTA+GGG | + | chr1_3:10374764-10374783 | Msa0103240:intron | 30.0% | |
| ! | AAAGAGGGATAATAACTTGT+TGG | + | chr1_3:10375078-10375097 | Msa0103240:intron | 30.0% |
| !! | AAGAGGGATAATAACTTGTT+GGG | + | chr1_3:10375079-10375098 | Msa0103240:intron | 30.0% |
| CTTGGTAAAAAGAAATCTTC+TGG | + | chr1_3:10375163-10375182 | Msa0103240:CDS | 30.0% | |
| ! | AAAAAGAAATCTTCTGGAAG+AGG | + | chr1_3:10375169-10375188 | Msa0103240:CDS | 30.0% |
| AAAAAACAATACCTGAAAGC+CGG | - | chr1_3:10375200-10375219 | None:intergenic | 30.0% | |
| GAACCAAAACCTTATAAAGT+GGG | - | chr1_3:10375430-10375449 | None:intergenic | 30.0% | |
| TGAACCAAAACCTTATAAAG+TGG | - | chr1_3:10375431-10375450 | None:intergenic | 30.0% | |
| AGGATTTCTATATTGTTGTC+AGG | + | chr1_3:10375513-10375532 | Msa0103240:intron | 30.0% | |
| GGATTTCTATATTGTTGTCA+GGG | + | chr1_3:10375514-10375533 | Msa0103240:intron | 30.0% | |
| ATATACATTTGAGTCTTCAC+AGG | - | chr1_3:10375601-10375620 | None:intergenic | 30.0% | |
| AAGACTCAAATGTATATCTG+TGG | + | chr1_3:10375604-10375623 | Msa0103240:CDS | 30.0% | |
| !! | CTTAATCTTCTTAGCTTTTG+TGG | - | chr1_3:10375655-10375674 | None:intergenic | 30.0% |
| AATTGGATGTCCTAAATAAG+AGG | + | chr1_3:10375757-10375776 | Msa0103240:CDS | 30.0% | |
| TATTTGGATTCTATTCCGAA+AGG | + | chr1_3:10375837-10375856 | Msa0103240:CDS | 30.0% | |
| AAAGACCACTTTCATTTCAA+AGG | - | chr1_3:10376061-10376080 | None:intergenic | 30.0% | |
| ATGAGTCTATTATCCATTCT+AGG | - | chr1_3:10376084-10376103 | None:intergenic | 30.0% | |
| CAAATCCATAATTGAGGAAA+AGG | - | chr1_3:10376114-10376133 | None:intergenic | 30.0% | |
| CAAAGTCATATATCAGTACA+TGG | + | chr1_3:10376484-10376503 | Msa0103240:three_prime_UTR | 30.0% | |
| CATATATCAGTACATGGAAA+AGG | + | chr1_3:10376490-10376509 | Msa0103240:three_prime_UTR | 30.0% | |
| ! | TTACAAAAGCATATCTGATG+GGG | - | chr1_3:10376516-10376535 | None:intergenic | 30.0% |
| ! | CTTACAAAAGCATATCTGAT+GGG | - | chr1_3:10376517-10376536 | None:intergenic | 30.0% |
| ! | TCTTACAAAAGCATATCTGA+TGG | - | chr1_3:10376518-10376537 | None:intergenic | 30.0% |
| TTTACTGTGAGATAAAATGG+TGG | + | chr1_3:10376631-10376650 | Msa0103240:three_prime_UTR | 30.0% | |
| CAGACAAAGAGATTCTAAAT+TGG | - | chr1_3:10376695-10376714 | None:intergenic | 30.0% | |
| !!! | ATATAGTCTCATTTTAAGGC+TGG | + | chr1_3:10376932-10376951 | Msa0103240:three_prime_UTR | 30.0% |
| GAGAATGTTCCAATCTTTCA+TGG | + | chr1_3:10372453-10372472 | Msa0103240:five_prime_UTR | 35.0% | |
| AAGATTGTGTCTTGAAAGTG+AGG | - | chr1_3:10372501-10372520 | None:intergenic | 35.0% | |
| ! | CCATGTTTTGTAACACGAAA+AGG | - | chr1_3:10372722-10372741 | None:intergenic | 35.0% |
| ! | CCTTTTCGTGTTACAAAACA+TGG | + | chr1_3:10372719-10372738 | Msa0103240:intron | 35.0% |
| ! | CTTTGTAAGACTTGGTTCAA+TGG | + | chr1_3:10372828-10372847 | Msa0103240:intron | 35.0% |
| !! | TTGGTTCAATGGGTTTTGAT+TGG | + | chr1_3:10372839-10372858 | Msa0103240:intron | 35.0% |
| !!! | TGGTTCAATGGGTTTTGATT+GGG | + | chr1_3:10372840-10372859 | Msa0103240:intron | 35.0% |
| !!! | GCAACATTTTTTCAAGCTAG+TGG | - | chr1_3:10373021-10373040 | None:intergenic | 35.0% |
| AAAGTGGATGGAATTGAGTT+TGG | + | chr1_3:10373280-10373299 | Msa0103240:CDS | 35.0% | |
| !! | GAGCAAAAGTCATGGTTTTA+TGG | + | chr1_3:10373391-10373410 | Msa0103240:CDS | 35.0% |
| !!! | CAAAAGTCATGGTTTTATGG+AGG | + | chr1_3:10373394-10373413 | Msa0103240:CDS | 35.0% |
| !!! | TGGAGGATTTCTTTTCAAGT+CGG | + | chr1_3:10373411-10373430 | Msa0103240:CDS | 35.0% |
| !! | TTCTTCAGAATTTGGTGCTT+TGG | + | chr1_3:10373463-10373482 | Msa0103240:CDS | 35.0% |
| CAAAGAGGGTTAAAAAGAGT+TGG | + | chr1_3:10373648-10373667 | Msa0103240:CDS | 35.0% | |
| AACAAGGAGAATCTGATAAC+AGG | + | chr1_3:10373711-10373730 | Msa0103240:CDS | 35.0% | |
| GGAACTTTCAGCTCTTTATA+TGG | + | chr1_3:10373811-10373830 | Msa0103240:CDS | 35.0% | |
| ACTATGAAATTTAGTCCGGA+CGG | + | chr1_3:10373869-10373888 | Msa0103240:CDS | 35.0% | |
| ATACAGGATGTATCAACTTC+TGG | - | chr1_3:10373980-10373999 | None:intergenic | 35.0% | |
| ! | CTGAATCTGATGTCTTTTTC+AGG | - | chr1_3:10374078-10374097 | None:intergenic | 35.0% |
| !! | TTGCATCATTTTTCCTCCTA+AGG | + | chr1_3:10374099-10374118 | Msa0103240:CDS | 35.0% |
| AAACCACTTCATGAGTTTCA+TGG | + | chr1_3:10374139-10374158 | Msa0103240:CDS | 35.0% | |
| ! | GTGAAATTTTGGATCTCTCT+TGG | + | chr1_3:10374170-10374189 | Msa0103240:CDS | 35.0% |
| ! | GTTTTCTCACACAGTAACTA+TGG | + | chr1_3:10374400-10374419 | Msa0103240:CDS | 35.0% |
| ATGCATACAATTCAATCCTG+TGG | + | chr1_3:10374545-10374564 | Msa0103240:CDS | 35.0% | |
| ! | TTCATTAGCGGATCAATAGA+TGG | + | chr1_3:10374579-10374598 | Msa0103240:CDS | 35.0% |
| CAATCAACAACATGACAATC+AGG | - | chr1_3:10374627-10374646 | None:intergenic | 35.0% | |
| CTGATTGTCATGTTGTTGAT+TGG | + | chr1_3:10374625-10374644 | Msa0103240:CDS | 35.0% | |
| AGAAATTATACCTGTCCATC+AGG | - | chr1_3:10374690-10374709 | None:intergenic | 35.0% | |
| AGAATCTTCATTTCTTCCGA+AGG | - | chr1_3:10374721-10374740 | None:intergenic | 35.0% | |
| CGGAAGAAATGAAGATTCTA+TGG | + | chr1_3:10374722-10374741 | Msa0103240:intron | 35.0% | |
| CAATAATCCCTACCTGTATA+AGG | - | chr1_3:10374774-10374793 | None:intergenic | 35.0% | |
| CTTATACAGGTAGGGATTAT+TGG | + | chr1_3:10374772-10374791 | Msa0103240:intron | 35.0% | |
| !!! | TGTCGGTTTTACAATGTATC+AGG | + | chr1_3:10374811-10374830 | Msa0103240:CDS | 35.0% |
| TTTATCTGCATATGTAGCAC+CGG | + | chr1_3:10374870-10374889 | Msa0103240:intron | 35.0% | |
| !! | AACTATTATCGGTGTCAACA+TGG | + | chr1_3:10374977-10374996 | Msa0103240:intron | 35.0% |
| ! | ATTTGAAGCACTTGCTAAAC+TGG | - | chr1_3:10375047-10375066 | None:intergenic | 35.0% |
| !!! | GTTGGGTTTGCTTTTGTTTT+TGG | + | chr1_3:10375096-10375115 | Msa0103240:intron | 35.0% |
| CAATCACAACTATGCTTACT+TGG | + | chr1_3:10375145-10375164 | Msa0103240:CDS | 35.0% | |
| GAAAAAGATGCTTCGATCTT+TGG | - | chr1_3:10375266-10375285 | None:intergenic | 35.0% | |
| TCACAAGTCAGAATCATTGA+AGG | + | chr1_3:10375363-10375382 | Msa0103240:CDS | 35.0% | |
| CACAAGTCAGAATCATTGAA+GGG | + | chr1_3:10375364-10375383 | Msa0103240:CDS | 35.0% | |
| ! | AATGTCCGCATCTTTTACTT+CGG | + | chr1_3:10375554-10375573 | Msa0103240:CDS | 35.0% |
| !! | AAAAAGAAGATGGTGGATCA+AGG | - | chr1_3:10375800-10375819 | None:intergenic | 35.0% |
| CTTAGAGAAAAAGAAGATGG+TGG | - | chr1_3:10375807-10375826 | None:intergenic | 35.0% | |
| TGGCTTAGAGAAAAAGAAGA+TGG | - | chr1_3:10375810-10375829 | None:intergenic | 35.0% | |
| TACTTCCAATTGTCATGCAT+GGG | + | chr1_3:10375965-10375984 | Msa0103240:CDS | 35.0% | |
| ! | CTTTCATTTCAAAGGAGTAC+AGG | - | chr1_3:10376053-10376072 | None:intergenic | 35.0% |
| !! | GTACTCCTTTGAAATGAAAG+TGG | + | chr1_3:10376053-10376072 | Msa0103240:exon | 35.0% |
| ! | AGTGTCCTTTTCCTCAATTA+TGG | + | chr1_3:10376106-10376125 | Msa0103240:three_prime_UTR | 35.0% |
| ! | CCTCAATTATGGATTTGCTT+CGG | + | chr1_3:10376117-10376136 | Msa0103240:three_prime_UTR | 35.0% |
| !!! | CGAAACTGCAGTCTTTTTTA+AGG | - | chr1_3:10376255-10376274 | None:intergenic | 35.0% |
| ACTTATCAGTTCATGACAAG+TGG | + | chr1_3:10376335-10376354 | Msa0103240:three_prime_UTR | 35.0% | |
| !! | AGTGGATTACATTAGAACCA+CGG | - | chr1_3:10376369-10376388 | None:intergenic | 35.0% |
| TCCACTGAAAAATGAAGAAG+TGG | + | chr1_3:10376383-10376402 | Msa0103240:three_prime_UTR | 35.0% | |
| !! | ACCACTTCTTCATTTTTCAG+TGG | - | chr1_3:10376387-10376406 | None:intergenic | 35.0% |
| !! | TGGTTAAGTGTTGATTGTCT+TGG | + | chr1_3:10376403-10376422 | Msa0103240:three_prime_UTR | 35.0% |
| ! | TGACTTTGCACCTCTTTTAA+GGG | - | chr1_3:10376472-10376491 | None:intergenic | 35.0% |
| ! | ATGACTTTGCACCTCTTTTA+AGG | - | chr1_3:10376473-10376492 | None:intergenic | 35.0% |
| ! | GCTTTTGTAAGACTCTTGTT+TGG | + | chr1_3:10376526-10376545 | Msa0103240:three_prime_UTR | 35.0% |
| GGAAAAGAGATTCATTCAAG+AGG | + | chr1_3:10376596-10376615 | Msa0103240:three_prime_UTR | 35.0% | |
| CTTTCTATCCATTTCATGGT+AGG | + | chr1_3:10376720-10376739 | Msa0103240:three_prime_UTR | 35.0% | |
| AAAACTGCAACTGTTCAACT+AGG | - | chr1_3:10376793-10376812 | None:intergenic | 35.0% | |
| ! | TAGTTGAACAGTTGCAGTTT+TGG | + | chr1_3:10376792-10376811 | Msa0103240:three_prime_UTR | 35.0% |
| AAGCAGCAACCATGAAAGAT+TGG | - | chr1_3:10372465-10372484 | None:intergenic | 40.0% | |
| !!! | GTTTTGATTGGGATCTCTGT+TGG | + | chr1_3:10372851-10372870 | Msa0103240:intron | 40.0% |
| ! | ATAGTTTGGGGGTGTAGATA+AGG | + | chr1_3:10372981-10373000 | Msa0103240:intron | 40.0% |
| ! | GGGTTGAATAAGAAGCACAA+TGG | + | chr1_3:10373061-10373080 | Msa0103240:exon | 40.0% |
| ! | GAATAAGAAGCACAATGGCT+AGG | + | chr1_3:10373066-10373085 | Msa0103240:exon | 40.0% |
| GTGTCAATCTCAGATGCAAA+TGG | + | chr1_3:10373134-10373153 | Msa0103240:CDS | 40.0% | |
| TTGGATATGAATTGTGGACC+AGG | + | chr1_3:10373219-10373238 | Msa0103240:CDS | 40.0% | |
| AACCTTGAGAATTCGGTAGA+TGG | + | chr1_3:10373311-10373330 | Msa0103240:CDS | 40.0% | |
| TTCCATCTACCGAATTCTCA+AGG | - | chr1_3:10373316-10373335 | None:intergenic | 40.0% | |
| AGTAGTGTGAGCAAAAGTCA+TGG | + | chr1_3:10373383-10373402 | Msa0103240:CDS | 40.0% | |
| !! | TTCAGAATTTGGTGCTTTGG+TGG | + | chr1_3:10373466-10373485 | Msa0103240:CDS | 40.0% |
| TTTGGATCAGTCAGTGGTTT+CGG | + | chr1_3:10373532-10373551 | Msa0103240:CDS | 40.0% | |
| !! | TGCATGATGGATGTACAACA+AGG | + | chr1_3:10373695-10373714 | Msa0103240:CDS | 40.0% |
| GTGTTTCATTCTCTGGTTGT+AGG | + | chr1_3:10373747-10373766 | Msa0103240:CDS | 40.0% | |
| TTGTAGGATTCAGCGAGTTA+AGG | + | chr1_3:10373763-10373782 | Msa0103240:CDS | 40.0% | |
| AAGATGGAATTGTGCGATTG+TGG | + | chr1_3:10373915-10373934 | Msa0103240:CDS | 40.0% | |
| CTTTACGGTGAATGATCTCT+CGG | + | chr1_3:10374003-10374022 | Msa0103240:CDS | 40.0% | |
| ! | GGAATTGACACCCTTGTTTA+TGG | + | chr1_3:10374024-10374043 | Msa0103240:CDS | 40.0% |
| ! | GACACCCTTGTTTATGGATA+AGG | + | chr1_3:10374030-10374049 | Msa0103240:CDS | 40.0% |
| GAAGTGGTTTCTCCATCAAA+CGG | - | chr1_3:10374129-10374148 | None:intergenic | 40.0% | |
| TGACCATGAAACTCATGAAG+TGG | - | chr1_3:10374145-10374164 | None:intergenic | 40.0% | |
| CTTCATGAGTTTCATGGTCA+TGG | + | chr1_3:10374145-10374164 | Msa0103240:CDS | 40.0% | |
| ! | TGGTCATGGAGGTGAAATTT+TGG | + | chr1_3:10374159-10374178 | Msa0103240:CDS | 40.0% |
| ! | TAGATGGAAAAGTGCGCATA+TGG | + | chr1_3:10374595-10374614 | Msa0103240:CDS | 40.0% |
| ! | AGATGGAAAAGTGCGCATAT+GGG | + | chr1_3:10374596-10374615 | Msa0103240:CDS | 40.0% |
| ! | GGTGCTACATATGCAGATAA+AGG | - | chr1_3:10374871-10374890 | None:intergenic | 40.0% |
| ACGCATCCAATATGAAGTAC+CGG | - | chr1_3:10374892-10374911 | None:intergenic | 40.0% | |
| TTGAATGTTGCATGTCGTGT+CGG | - | chr1_3:10374941-10374960 | None:intergenic | 40.0% | |
| TTCAACTTACGTATCGTGTC+TGG | + | chr1_3:10375004-10375023 | Msa0103240:intron | 40.0% | |
| ! | TCTTCTGGAAGAGGAATAAC+CGG | + | chr1_3:10375178-10375197 | Msa0103240:CDS | 40.0% |
| TGTTTCGCTCCCACTTTATA+AGG | + | chr1_3:10375418-10375437 | Msa0103240:intron | 40.0% | |
| ! | GCTCCCACTTTATAAGGTTT+TGG | + | chr1_3:10375424-10375443 | Msa0103240:intron | 40.0% |
| TCCATCCGAAGTAAAAGATG+CGG | - | chr1_3:10375562-10375581 | None:intergenic | 40.0% | |
| ! | CTTGAGGTGACCTCTTATTT+AGG | - | chr1_3:10375770-10375789 | None:intergenic | 40.0% |
| TGAAGTAGGAAGTTTCTCCT+CGG | - | chr1_3:10375877-10375896 | None:intergenic | 40.0% | |
| TTACTCTTAGGGCTTGAAGT+AGG | - | chr1_3:10375891-10375910 | None:intergenic | 40.0% | |
| GTACTTCCAATTGTCATGCA+TGG | + | chr1_3:10375964-10375983 | Msa0103240:CDS | 40.0% | |
| ACTTCCAATTGTCATGCATG+GGG | + | chr1_3:10375966-10375985 | Msa0103240:CDS | 40.0% | |
| GTACAGGTAATCCGTAATTG+TGG | - | chr1_3:10376037-10376056 | None:intergenic | 40.0% | |
| GAAAGTGGTCTTTCCTAGAA+TGG | + | chr1_3:10376068-10376087 | Msa0103240:three_prime_UTR | 40.0% | |
| CCGAAGCAAATCCATAATTG+AGG | - | chr1_3:10376120-10376139 | None:intergenic | 40.0% | |
| TCAACTTCGACAGCATCAAA+AGG | + | chr1_3:10376198-10376217 | Msa0103240:three_prime_UTR | 40.0% | |
| !! | ACTTTTCGAGCTTCCACTTT+CGG | + | chr1_3:10376293-10376312 | Msa0103240:three_prime_UTR | 40.0% |
| AAATTGCCTTTACCTCACAC+AGG | + | chr1_3:10376436-10376455 | Msa0103240:three_prime_UTR | 40.0% | |
| CATATTCCTGTGTGAGGTAA+AGG | - | chr1_3:10376445-10376464 | None:intergenic | 40.0% | |
| AATATGCTGGCCCTTAAAAG+AGG | + | chr1_3:10376459-10376478 | Msa0103240:three_prime_UTR | 40.0% | |
| GAGATTCATTCAAGAGGAAG+TGG | + | chr1_3:10376602-10376621 | Msa0103240:three_prime_UTR | 40.0% | |
| ACTGTGAGATAAAATGGTGG+TGG | + | chr1_3:10376634-10376653 | Msa0103240:three_prime_UTR | 40.0% | |
| CTGTGAGATAAAATGGTGGT+GGG | + | chr1_3:10376635-10376654 | Msa0103240:three_prime_UTR | 40.0% | |
| ! | TGTGAGATAAAATGGTGGTG+GGG | + | chr1_3:10376636-10376655 | Msa0103240:three_prime_UTR | 40.0% |
| TAGCTGATTGTTACAGCCTA+TGG | + | chr1_3:10376859-10376878 | Msa0103240:three_prime_UTR | 40.0% | |
| AGAGAGAAACACACACAGAG+AGG | + | chr1_3:10372424-10372443 | Msa0103240:five_prime_UTR | 45.0% | |
| ! | GACAACCCTGAAGTTGATTC+TGG | + | chr1_3:10373164-10373183 | Msa0103240:CDS | 45.0% |
| GAGGACCAGAATCAACTTCA+GGG | - | chr1_3:10373172-10373191 | None:intergenic | 45.0% | |
| ! | AGTTGATTCTGGTCCTCCTT+TGG | + | chr1_3:10373175-10373194 | Msa0103240:CDS | 45.0% |
| !!! | GAGGGTTTGCTGAGAGATTT+TGG | + | chr1_3:10373200-10373219 | Msa0103240:CDS | 45.0% |
| TGGTGCTTTGGTGGAGAATT+CGG | + | chr1_3:10373475-10373494 | Msa0103240:CDS | 45.0% | |
| AGAATTCGGCATGCGAAGAT+AGG | + | chr1_3:10373489-10373508 | Msa0103240:CDS | 45.0% | |
| GCATGCGAAGATAGGAATGA+TGG | + | chr1_3:10373497-10373516 | Msa0103240:CDS | 45.0% | |
| ! | CGAAGATAGGAATGATGGAG+TGG | + | chr1_3:10373502-10373521 | Msa0103240:CDS | 45.0% |
| ! | AGGAATGATGGAGTGGAAGT+AGG | + | chr1_3:10373509-10373528 | Msa0103240:CDS | 45.0% |
| TGATGGAGTGGAAGTAGGTT+TGG | + | chr1_3:10373514-10373533 | Msa0103240:CDS | 45.0% | |
| AGTAGGTTTGGATCAGTCAG+TGG | + | chr1_3:10373526-10373545 | Msa0103240:CDS | 45.0% | |
| ACCAGTTACCAGCATGAGTT+TGG | + | chr1_3:10373587-10373606 | Msa0103240:CDS | 45.0% | |
| ACCAAACTCATGCTGGTAAC+TGG | - | chr1_3:10373591-10373610 | None:intergenic | 45.0% | |
| ! | TTACCAGCATGAGTTTGGTG+AGG | + | chr1_3:10373592-10373611 | Msa0103240:CDS | 45.0% |
| TGTTTGAGTCGTGGACAAAG+AGG | + | chr1_3:10373633-10373652 | Msa0103240:CDS | 45.0% | |
| GTTTGAGTCGTGGACAAAGA+GGG | + | chr1_3:10373634-10373653 | Msa0103240:CDS | 45.0% | |
| GCGTTCAATGACATGCATGA+TGG | + | chr1_3:10373682-10373701 | Msa0103240:CDS | 45.0% | |
| ! | GATAACAGGAAGCACGAAGA+CGG | + | chr1_3:10373725-10373744 | Msa0103240:CDS | 45.0% |
| GAAGACGGTGTTTCATTCTC+TGG | + | chr1_3:10373740-10373759 | Msa0103240:CDS | 45.0% | |
| CAAGATATTCAAGCGCACGA+AGG | + | chr1_3:10373836-10373855 | Msa0103240:CDS | 45.0% | |
| ATCAAACGGAAGACCTTAGG+AGG | - | chr1_3:10374115-10374134 | None:intergenic | 45.0% | |
| TCCTAAGGTCTTCCGTTTGA+TGG | + | chr1_3:10374114-10374133 | Msa0103240:CDS | 45.0% | |
| TCCATCAAACGGAAGACCTT+AGG | - | chr1_3:10374118-10374137 | None:intergenic | 45.0% | |
| CATGAGTTTCATGGTCATGG+AGG | + | chr1_3:10374148-10374167 | Msa0103240:CDS | 45.0% | |
| !! | GCAGTATTTGCTGTCATCGT+CGG | + | chr1_3:10374327-10374346 | Msa0103240:intron | 45.0% |
| AACTGTTCGTCTATGGCAAG+TGG | + | chr1_3:10374357-10374376 | Msa0103240:CDS | 45.0% | |
| ACTGTTCGTCTATGGCAAGT+GGG | + | chr1_3:10374358-10374377 | Msa0103240:CDS | 45.0% | |
| !! | AGAAGAACAGAAAGGCGTTG+AGG | - | chr1_3:10374430-10374449 | None:intergenic | 45.0% |
| ! | TGTTGATTGGACTGACGTCA+AGG | + | chr1_3:10374638-10374657 | Msa0103240:CDS | 45.0% |
| AAACCGACAATTGCCTGTCA+TGG | - | chr1_3:10374800-10374819 | None:intergenic | 45.0% | |
| !! | GTAGCACCGGTACTTCATAT+TGG | + | chr1_3:10374883-10374902 | Msa0103240:intron | 45.0% |
| ! | AAGAGGAATAACCGGCTTTC+AGG | + | chr1_3:10375186-10375205 | Msa0103240:CDS | 45.0% |
| ! | TCTGACTTGTGAATCAGCAC+AGG | - | chr1_3:10375355-10375374 | None:intergenic | 45.0% |
| ! | TCCGCATCTTTTACTTCGGA+TGG | + | chr1_3:10375558-10375577 | Msa0103240:CDS | 45.0% |
| CTGTGGAATGTTAGTGACGA+CGG | + | chr1_3:10375621-10375640 | Msa0103240:CDS | 45.0% | |
| TGTGGAATGTTAGTGACGAC+GGG | + | chr1_3:10375622-10375641 | Msa0103240:CDS | 45.0% | |
| AGAAGATTAAGTCCTGCGAG+CGG | + | chr1_3:10375664-10375683 | Msa0103240:CDS | 45.0% | |
| TCAGATTTCAAACCACCCCA+AGG | - | chr1_3:10375717-10375736 | None:intergenic | 45.0% | |
| GGATAAGTTGCGGAACCTTT+CGG | - | chr1_3:10375855-10375874 | None:intergenic | 45.0% | |
| TTTCTCCTCGGGATAAGTTG+CGG | - | chr1_3:10375865-10375884 | None:intergenic | 45.0% | |
| GAAGTAGGAAGTTTCTCCTC+GGG | - | chr1_3:10375876-10375895 | None:intergenic | 45.0% | |
| TAGACCCCATGCATGACAAT+TGG | - | chr1_3:10375973-10375992 | None:intergenic | 45.0% | |
| TAGTAATCGTGACTGCTGGT+TGG | + | chr1_3:10375991-10376010 | Msa0103240:CDS | 45.0% | |
| ! | AGTAATCGTGACTGCTGGTT+GGG | + | chr1_3:10375992-10376011 | Msa0103240:CDS | 45.0% |
| CGATGTCCTTGGAAAATTGC+TGG | + | chr1_3:10376142-10376161 | Msa0103240:three_prime_UTR | 45.0% | |
| ! | TAGCAGCCAGCAATTTTCCA+AGG | - | chr1_3:10376151-10376170 | None:intergenic | 45.0% |
| CATCAAAAGGATAACCGAGC+AGG | + | chr1_3:10376211-10376230 | Msa0103240:three_prime_UTR | 45.0% | |
| AGCTTCCACTTTCGGATTTC+AGG | + | chr1_3:10376301-10376320 | Msa0103240:three_prime_UTR | 45.0% | |
| GCTTCCACTTTCGGATTTCA+GGG | + | chr1_3:10376302-10376321 | Msa0103240:three_prime_UTR | 45.0% | |
| CTTCCACTTTCGGATTTCAG+GGG | + | chr1_3:10376303-10376322 | Msa0103240:three_prime_UTR | 45.0% | |
| AATCCCCTGAAATCCGAAAG+TGG | - | chr1_3:10376309-10376328 | None:intergenic | 45.0% | |
| TACCTCACACAGGAATATGC+TGG | + | chr1_3:10376446-10376465 | Msa0103240:three_prime_UTR | 45.0% | |
| TGTGTGAAAGAGAGAGAGAG+AGG | + | chr1_3:10376565-10376584 | Msa0103240:three_prime_UTR | 45.0% | |
| GTGTGAAAGAGAGAGAGAGA+GGG | + | chr1_3:10376566-10376585 | Msa0103240:three_prime_UTR | 45.0% | |
| !! | GTGAGATAAAATGGTGGTGG+GGG | + | chr1_3:10376637-10376656 | Msa0103240:three_prime_UTR | 45.0% |
| !! | TGAGATAAAATGGTGGTGGG+GGG | + | chr1_3:10376638-10376657 | Msa0103240:three_prime_UTR | 45.0% |
| TTGAGGGTCCTACCATGAAA+TGG | - | chr1_3:10376731-10376750 | None:intergenic | 45.0% | |
| TTCCAACCTCAGGCATTTGA+GGG | - | chr1_3:10376747-10376766 | None:intergenic | 45.0% | |
| TCAAATGCCTGAGGTTGGAA+GGG | + | chr1_3:10376747-10376766 | Msa0103240:three_prime_UTR | 45.0% | |
| AGGTTGGAAGGGTGATGATT+GGG | + | chr1_3:10376758-10376777 | Msa0103240:three_prime_UTR | 45.0% | |
| AGTACTGTAGCAGTAGCCAT+AGG | - | chr1_3:10376878-10376897 | None:intergenic | 45.0% | |
| !!! | AAAAAAATAAAACATTTTTA+AGG | - | chr1_3:10372594-10372613 | None:intergenic | 5.0% |
| !! | AAATTAATAATTGTATAAAA+TGG | + | chr1_3:10376993-10377012 | Msa0103240:three_prime_UTR | 5.0% |
| GGGATCTCTGTTGGATCTCT+TGG | + | chr1_3:10372860-10372879 | Msa0103240:intron | 50.0% | |
| GGAGGACCAGAATCAACTTC+AGG | - | chr1_3:10373173-10373192 | None:intergenic | 50.0% | |
| TGATTCTGGTCCTCCTTTGG+TGG | + | chr1_3:10373178-10373197 | Msa0103240:CDS | 50.0% | |
| TGAATTGTGGACCAGGAGTC+CGG | + | chr1_3:10373226-10373245 | Msa0103240:CDS | 50.0% | |
| CTACGCTCTCTAACACTACC+CGG | - | chr1_3:10373248-10373267 | None:intergenic | 50.0% | |
| TGAATCTGTGAACGCTGCTG+AGG | + | chr1_3:10373556-10373575 | Msa0103240:CDS | 50.0% | |
| ACTCCTCACCAAACTCATGC+TGG | - | chr1_3:10373598-10373617 | None:intergenic | 50.0% | |
| ! | TGAGTTTGGTGAGGAGTTCG+AGG | + | chr1_3:10373601-10373620 | Msa0103240:CDS | 50.0% |
| ! | GAGTTTGGTGAGGAGTTCGA+GGG | + | chr1_3:10373602-10373621 | Msa0103240:CDS | 50.0% |
| ! | AGTTTGGTGAGGAGTTCGAG+GGG | + | chr1_3:10373603-10373622 | Msa0103240:CDS | 50.0% |
| GGACAGGTATGTTTGAGTCG+TGG | + | chr1_3:10373624-10373643 | Msa0103240:CDS | 50.0% | |
| TCGCACAATTCCATCTTCGC+CGG | - | chr1_3:10373912-10373931 | None:intergenic | 50.0% | |
| GCGATTGTGGCAAGTTGTTG+AGG | + | chr1_3:10373928-10373947 | Msa0103240:CDS | 50.0% | |
| GGCAAGTTGTTGAGGATGAG+AGG | + | chr1_3:10373936-10373955 | Msa0103240:CDS | 50.0% | |
| TTGTCACCGCAGTGTGCTAT+CGG | + | chr1_3:10374664-10374683 | Msa0103240:CDS | 50.0% | |
| !! | GGGATTATTGGCTCCATGAC+AGG | + | chr1_3:10374784-10374803 | Msa0103240:CDS | 50.0% |
| GCTCCATGACAGGCAATTGT+CGG | + | chr1_3:10374794-10374813 | Msa0103240:CDS | 50.0% | |
| GTTTGAAAAGAACCGCTCGC+AGG | - | chr1_3:10375679-10375698 | None:intergenic | 50.0% | |
| ACGCATCTGTTGCAGTACCT+TGG | + | chr1_3:10375697-10375716 | Msa0103240:CDS | 50.0% | |
| CGCATCTGTTGCAGTACCTT+GGG | + | chr1_3:10375698-10375717 | Msa0103240:CDS | 50.0% | |
| GCATCTGTTGCAGTACCTTG+GGG | + | chr1_3:10375699-10375718 | Msa0103240:CDS | 50.0% | |
| GGATCAAGGCATACAGCTTG+AGG | - | chr1_3:10375786-10375805 | None:intergenic | 50.0% | |
| GGTCTAGTAATCGTGACTGC+TGG | + | chr1_3:10375987-10376006 | Msa0103240:CDS | 50.0% | |
| CTTCCAACCTCAGGCATTTG+AGG | - | chr1_3:10376748-10376767 | None:intergenic | 50.0% | |
| CTCAAATGCCTGAGGTTGGA+AGG | + | chr1_3:10376746-10376765 | Msa0103240:three_prime_UTR | 50.0% | |
| ATCATCACCCTTCCAACCTC+AGG | - | chr1_3:10376757-10376776 | None:intergenic | 50.0% | |
| GAGGTTGGAAGGGTGATGAT+TGG | + | chr1_3:10376757-10376776 | Msa0103240:three_prime_UTR | 50.0% | |
| TGGAAGGGTGATGATTGGGA+TGG | + | chr1_3:10376762-10376781 | Msa0103240:three_prime_UTR | 50.0% | |
| TTCTGGTCCTCCTTTGGTGG+AGG | + | chr1_3:10373181-10373200 | Msa0103240:CDS | 55.0% | |
| TCTGGTCCTCCTTTGGTGGA+GGG | + | chr1_3:10373182-10373201 | Msa0103240:CDS | 55.0% | |
| AGCAAACCCTCCACCAAAGG+AGG | - | chr1_3:10373191-10373210 | None:intergenic | 55.0% | |
| CTCAGCAAACCCTCCACCAA+AGG | - | chr1_3:10373194-10373213 | None:intergenic | 55.0% | |
| GAATTGTGGACCAGGAGTCC+GGG | + | chr1_3:10373227-10373246 | Msa0103240:CDS | 55.0% | |
| TCTAACACTACCCGGACTCC+TGG | - | chr1_3:10373240-10373259 | None:intergenic | 55.0% | |
| ! | CGGGTAGTGTTAGAGAGCGT+AGG | + | chr1_3:10373246-10373265 | Msa0103240:CDS | 55.0% |
| CTAGCAAGATACTGGCCGTC+CGG | - | chr1_3:10373887-10373906 | None:intergenic | 55.0% | |
| GGCCAGTATCTTGCTAGTGC+CGG | + | chr1_3:10373890-10373909 | Msa0103240:CDS | 55.0% | |
| ATCAGGCCGATAGCACACTG+CGG | - | chr1_3:10374673-10374692 | None:intergenic | 55.0% | |
| TGTCGGACACTGACACAGGT+GGG | - | chr1_3:10374924-10374943 | None:intergenic | 55.0% | |
| TCTGTTGCAGTACCTTGGGG+TGG | + | chr1_3:10375702-10375721 | Msa0103240:CDS | 55.0% | |
| AGGTTCCGCAACTTATCCCG+AGG | + | chr1_3:10375857-10375876 | Msa0103240:CDS | 55.0% | |
| ! | ATCGTGACTGCTGGTTGGGA+TGG | + | chr1_3:10375996-10376015 | Msa0103240:CDS | 55.0% |
| ! | TCGTGACTGCTGGTTGGGAT+GGG | + | chr1_3:10375997-10376016 | Msa0103240:CDS | 55.0% |
| TTGCTTCGGCACGATGTCCT+TGG | + | chr1_3:10376131-10376150 | Msa0103240:three_prime_UTR | 55.0% | |
| ACCTTTGACTGCAGCCTGCT+CGG | - | chr1_3:10376228-10376247 | None:intergenic | 55.0% | |
| GGCCAGCATATTCCTGTGTG+AGG | - | chr1_3:10376451-10376470 | None:intergenic | 55.0% | |
| AGAGAGAGAGAGGGAGAGAG+AGG | + | chr1_3:10376575-10376594 | Msa0103240:three_prime_UTR | 55.0% | |
| !! | ATGGTGGTGGGGGGTATTTG+TGG | + | chr1_3:10376647-10376666 | Msa0103240:three_prime_UTR | 55.0% |
| GTAGGACCCTCAAATGCCTG+AGG | + | chr1_3:10376738-10376757 | Msa0103240:three_prime_UTR | 55.0% | |
| GACCCTCAAATGCCTGAGGT+TGG | + | chr1_3:10376742-10376761 | Msa0103240:three_prime_UTR | 55.0% | |
| CGCCGGCACTAGCAAGATAC+TGG | - | chr1_3:10373895-10373914 | None:intergenic | 60.0% | |
| !! | CTTGCTAGTGCCGGCGAAGA+TGG | + | chr1_3:10373899-10373918 | Msa0103240:CDS | 60.0% |
| GCAGTGTGCTATCGGCCTGA+TGG | + | chr1_3:10374672-10374691 | Msa0103240:CDS | 60.0% | |
| ! | GTGCTATCGGCCTGATGGAC+AGG | + | chr1_3:10374677-10374696 | Msa0103240:CDS | 60.0% |
| GTGTCGGACACTGACACAGG+TGG | - | chr1_3:10374925-10374944 | None:intergenic | 60.0% | |
| GTCGTGTCGGACACTGACAC+AGG | - | chr1_3:10374928-10374947 | None:intergenic | 60.0% | |
| ACCGAGCAGGCTGCAGTCAA+AGG | + | chr1_3:10376224-10376243 | Msa0103240:three_prime_UTR | 60.0% | |
| GACAAGTGGCTTCACGACCG+TGG | + | chr1_3:10376349-10376368 | Msa0103240:three_prime_UTR | 60.0% | |
| GGTGAGGAGTTCGAGGGGAC+AGG | + | chr1_3:10373608-10373627 | Msa0103240:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 10372406 | 10377074 | 10372406 | ID=Msa0103240;Name=Msa0103240 |
| chr1_3 | mRNA | 10372406 | 10377074 | 10372406 | ID=Msa0103240-mRNA-1;Parent=Msa0103240;Name=Msa0103240-mRNA-1;_AED=0.04;_eAED=0.04;_QI=244|1|1|1|0.85|0.75|8|1010|709 |
| chr1_3 | exon | 10372406 | 10372554 | 10372406 | ID=Msa0103240-mRNA-1:exon:4273;Parent=Msa0103240-mRNA-1 |
| chr1_3 | exon | 10372985 | 10374204 | 10372985 | ID=Msa0103240-mRNA-1:exon:4274;Parent=Msa0103240-mRNA-1 |
| chr1_3 | exon | 10374331 | 10374421 | 10374331 | ID=Msa0103240-mRNA-1:exon:4275;Parent=Msa0103240-mRNA-1 |
| chr1_3 | exon | 10374541 | 10374698 | 10374541 | ID=Msa0103240-mRNA-1:exon:4276;Parent=Msa0103240-mRNA-1 |
| chr1_3 | exon | 10374781 | 10374832 | 10374781 | ID=Msa0103240-mRNA-1:exon:4277;Parent=Msa0103240-mRNA-1 |
| chr1_3 | exon | 10375128 | 10375207 | 10375128 | ID=Msa0103240-mRNA-1:exon:4278;Parent=Msa0103240-mRNA-1 |
| chr1_3 | exon | 10375318 | 10375411 | 10375318 | ID=Msa0103240-mRNA-1:exon:4279;Parent=Msa0103240-mRNA-1 |
| chr1_3 | exon | 10375535 | 10377074 | 10375535 | ID=Msa0103240-mRNA-1:exon:4280;Parent=Msa0103240-mRNA-1 |
| chr1_3 | five_prime_UTR | 10372406 | 10372554 | 10372406 | ID=Msa0103240-mRNA-1:five_prime_utr;Parent=Msa0103240-mRNA-1 |
| chr1_3 | five_prime_UTR | 10372985 | 10373079 | 10372985 | ID=Msa0103240-mRNA-1:five_prime_utr;Parent=Msa0103240-mRNA-1 |
| chr1_3 | CDS | 10373080 | 10374204 | 10373080 | ID=Msa0103240-mRNA-1:cds;Parent=Msa0103240-mRNA-1 |
| chr1_3 | CDS | 10374331 | 10374421 | 10374331 | ID=Msa0103240-mRNA-1:cds;Parent=Msa0103240-mRNA-1 |
| chr1_3 | CDS | 10374541 | 10374698 | 10374541 | ID=Msa0103240-mRNA-1:cds;Parent=Msa0103240-mRNA-1 |
| chr1_3 | CDS | 10374781 | 10374832 | 10374781 | ID=Msa0103240-mRNA-1:cds;Parent=Msa0103240-mRNA-1 |
| chr1_3 | CDS | 10375128 | 10375207 | 10375128 | ID=Msa0103240-mRNA-1:cds;Parent=Msa0103240-mRNA-1 |
| chr1_3 | CDS | 10375318 | 10375411 | 10375318 | ID=Msa0103240-mRNA-1:cds;Parent=Msa0103240-mRNA-1 |
| chr1_3 | CDS | 10375535 | 10376064 | 10375535 | ID=Msa0103240-mRNA-1:cds;Parent=Msa0103240-mRNA-1 |
| chr1_3 | three_prime_UTR | 10376065 | 10377074 | 10376065 | ID=Msa0103240-mRNA-1:three_prime_utr;Parent=Msa0103240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
