Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1265520 | AAU14795.1 | 98.860 | 351 | 4 | 0 | 50 | 400 | 61 | 411 | 0.0 | 699 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1265520 | sp|Q8VWJ1|HPT1_ARATH | 72.156 | 334 | 88 | 1 | 67 | 400 | 65 | 393 | 9.18e-173 | 490 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1265520 | Q647J9 | 98.860 | 351 | 4 | 0 | 50 | 400 | 61 | 411 | 0.0 | 699 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026780 | Msa1265520 | -0.800827 | 1.200612e-48 | -8.615850e-47 |
Msa0067590 | Msa1265520 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
Msa0091730 | Msa1265520 | -0.813238 | 2.832563e-51 | -8.615850e-47 |
Msa0646420 | Msa1265520 | -0.804991 | 1.655863e-49 | -8.615850e-47 |
Msa0662220 | Msa1265520 | -0.805291 | 1.432838e-49 | -8.615850e-47 |
Msa0122530 | Msa1265520 | -0.822823 | 1.927043e-53 | -8.615850e-47 |
Msa1265520 | Msa1307790 | -0.814570 | 1.440493e-51 | -8.615850e-47 |
Msa1265520 | Msa1337850 | -0.804733 | 1.875126e-49 | -8.615850e-47 |
Msa1265520 | Msa1392980 | -0.819998 | 8.649260e-53 | -8.615850e-47 |
Msa0312640 | Msa1265520 | -0.828263 | 9.910047e-55 | -8.615850e-47 |
Msa0549950 | Msa1265520 | -0.800839 | 1.194046e-48 | -8.615850e-47 |
Msa0940910 | Msa1265520 | -0.808231 | 3.427873e-50 | -8.615850e-47 |
Msa0969380 | Msa1265520 | -0.804731 | 1.876514e-49 | -8.615850e-47 |
Msa0969590 | Msa1265520 | -0.800568 | 1.355635e-48 | -8.615850e-47 |
Msa0969720 | Msa1265520 | -0.802690 | 4.977020e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1265520 | MtrunA17_Chr4g0072191 | 97.436 | 351 | 9 | 0 | 50 | 400 | 61 | 411 | 0.0 | 689 |
Msa1265520 | MtrunA17_Chr1g0176251 | 35.390 | 308 | 187 | 7 | 98 | 399 | 91 | 392 | 1.83e-46 | 164 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1265520 | AT2G18950.1 | 72.156 | 334 | 88 | 1 | 67 | 400 | 65 | 393 | 9.33e-174 | 490 |
Msa1265520 | AT2G18950.2 | 75.194 | 258 | 59 | 1 | 67 | 324 | 65 | 317 | 3.80e-135 | 390 |
Msa1265520 | AT3G11945.1 | 33.433 | 335 | 204 | 9 | 72 | 399 | 64 | 386 | 1.96e-44 | 158 |
Msa1265520 | AT3G11945.2 | 33.432 | 338 | 202 | 9 | 66 | 397 | 71 | 391 | 1.11e-43 | 157 |
Find 87 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAATCTCTGACAGGTATTT+TGG | 0.090566 | 8_2:-69899314 | Msa1265520:intron |
TGTTGTATCTTCTTCAATTC+TGG | 0.148269 | 8_2:-69901242 | Msa1265520:intron |
ATTGAAGGAGATAAAATATT+TGG | 0.210725 | 8_2:-69899436 | Msa1265520:CDS |
ACCCTTCTTGAATTGGCTTA+TGG | 0.218092 | 8_2:-69899282 | Msa1265520:CDS |
TAGGTTCATGGCCATTGTTT+TGG | 0.244456 | 8_2:-69901101 | Msa1265520:CDS |
TCCAGGCCACACACGGTTAT+TGG | 0.246004 | 8_2:-69902120 | Msa1265520:CDS |
CATCCTTCTACATGTTTATC+TGG | 0.262881 | 8_2:-69897721 | Msa1265520:CDS |
CAAGACTCCATCGAAATAAA+AGG | 0.314813 | 8_2:+69897179 | None:intergenic |
TTGTGTTACCCTTCTTGAAT+TGG | 0.325570 | 8_2:-69899289 | Msa1265520:CDS |
CAATATAAATGTTCATAAAC+AGG | 0.328480 | 8_2:+69901745 | None:intergenic |
CAAATCTCTTCCATCTCAAC+AGG | 0.335938 | 8_2:+69900146 | None:intergenic |
TTTATGAACATTTATATTGT+TGG | 0.348917 | 8_2:-69901741 | Msa1265520:CDS |
CCGGATGCCAAGGGAAGATA+TGG | 0.362386 | 8_2:+69901295 | None:intergenic |
AAGTTGCAGGTGGGAATCTT+TGG | 0.373594 | 8_2:-69902786 | Msa1265520:intron |
TCGGATTCAAAAGATTGTTC+AGG | 0.374186 | 8_2:+69902213 | None:intergenic |
TTGCCTGGATTGTAGGTTCA+TGG | 0.382656 | 8_2:-69901113 | Msa1265520:CDS |
AAACATGTAGAAGGATGTTA+TGG | 0.386693 | 8_2:+69897727 | None:intergenic |
ACAGGCATTAAGCATAATTT+CGG | 0.406456 | 8_2:-69901954 | Msa1265520:intron |
TGAAGAAGATACAACAATAA+TGG | 0.408142 | 8_2:+69901249 | None:intergenic |
GACAAAAGAACTCACGTTGA+TGG | 0.409674 | 8_2:+69901041 | None:intergenic |
CTGCATGCATGATGTATACT+TGG | 0.413429 | 8_2:-69897139 | Msa1265520:three_prime_UTR |
GCCAATAACCGTGTGTGGCC+TGG | 0.417281 | 8_2:+69902119 | None:intergenic |
TTAACTGCAATTGTAAATGA+AGG | 0.421617 | 8_2:-69897333 | Msa1265520:three_prime_UTR |
CTATTGCATTCTTGATATGT+AGG | 0.424870 | 8_2:+69902258 | None:intergenic |
AATGGTCTTGAAAAGACAAT+TGG | 0.432364 | 8_2:+69899627 | None:intergenic |
TATGGAGTCTCCCTTGTAGT+TGG | 0.436333 | 8_2:-69899264 | Msa1265520:CDS |
CTTCCAGATAAACATGTAGA+AGG | 0.437112 | 8_2:+69897718 | None:intergenic |
AAATGAAGGGTTATTTCTGT+TGG | 0.438474 | 8_2:-69897319 | Msa1265520:three_prime_UTR |
TGTAGTTATAGCATTGTTCA+AGG | 0.439585 | 8_2:-69899571 | Msa1265520:intron |
CATCAACTAAAAGACTATAT+AGG | 0.443945 | 8_2:-69897088 | Msa1265520:three_prime_UTR |
CCATATCTTCCCTTGGCATC+CGG | 0.448076 | 8_2:-69901295 | Msa1265520:CDS |
CGGATTCAAAAGATTGTTCA+GGG | 0.450897 | 8_2:+69902214 | None:intergenic |
GGAGAATATTCCTTTGCAAC+TGG | 0.454611 | 8_2:-69901274 | Msa1265520:CDS |
TGGATCAAAAGCAGGATGTT+CGG | 0.455346 | 8_2:+69902194 | None:intergenic |
TTTCCAATGTGTTAGAGTCT+GGG | 0.458228 | 8_2:-69897815 | Msa1265520:intron |
CTCATCTAACTAAAGGTATG+AGG | 0.465169 | 8_2:+69897442 | None:intergenic |
GAACAACATCTTCTTGCCTA+TGG | 0.469091 | 8_2:-69899242 | Msa1265520:CDS |
ACCAATTATAAAATCAAAGA+TGG | 0.475441 | 8_2:+69897356 | None:intergenic |
TTCATGGATTCATTACTTGT+TGG | 0.478510 | 8_2:-69902971 | Msa1265520:CDS |
TCGCAATAATGATTTAAACT+TGG | 0.478764 | 8_2:+69902297 | None:intergenic |
CCTATGGAGTAAAATTGTTA+CGG | 0.482072 | 8_2:-69899226 | Msa1265520:intron |
TTCAGGTGCCCCTGTTGAGA+TGG | 0.490811 | 8_2:-69900156 | Msa1265520:intron |
AATGAATATGAGCATGACTT+AGG | 0.494097 | 8_2:+69902941 | None:intergenic |
CTGCATTCTCATCTAACTAA+AGG | 0.499042 | 8_2:+69897435 | None:intergenic |
AATGAAGGGTTATTTCTGTT+GGG | 0.500548 | 8_2:-69897318 | Msa1265520:three_prime_UTR |
AAGGGTTATTTCTGTTGGGA+TGG | 0.503383 | 8_2:-69897314 | Msa1265520:three_prime_UTR |
CTTCTACATGTTTATCTGGA+AGG | 0.506016 | 8_2:-69897717 | Msa1265520:intron |
GGAATATTCTCCGGATGCCA+AGG | 0.511719 | 8_2:+69901285 | None:intergenic |
AATGATGCTGCTTTAGTCAT+CGG | 0.514151 | 8_2:-69897379 | Msa1265520:three_prime_UTR |
AAGATGTTGTTCCAACTACA+AGG | 0.518827 | 8_2:+69899253 | None:intergenic |
CTCCATAAGCCAATTCAAGA+AGG | 0.525019 | 8_2:+69899280 | None:intergenic |
TTGCAGGTGGGAATCTTTGG+CGG | 0.528625 | 8_2:-69902783 | Msa1265520:intron |
TAGGATATACCCGATATTGA+AGG | 0.534101 | 8_2:-69899451 | Msa1265520:CDS |
GTTTAAATCATTATTGCGAA+GGG | 0.536180 | 8_2:-69902293 | Msa1265520:CDS |
TAACTGCAATTGTAAATGAA+GGG | 0.541402 | 8_2:-69897332 | Msa1265520:three_prime_UTR |
TTCGGTGTCTCTCCTTGCAG+TGG | 0.543367 | 8_2:-69901936 | Msa1265520:CDS |
AAAATCTGTAGAAAGCATCC+AGG | 0.545036 | 8_2:+69902142 | None:intergenic |
AATGCAGTTGCAAAGATCAA+TGG | 0.545132 | 8_2:+69899609 | None:intergenic |
TACCTTGTCTATTTCAACAT+CGG | 0.553008 | 8_2:+69901704 | None:intergenic |
TGGCCATGAACCTACAATCC+AGG | 0.555447 | 8_2:+69901110 | None:intergenic |
CATTATTGCGAAGGGGCAGA+AGG | 0.557985 | 8_2:-69902285 | Msa1265520:CDS |
TCATATTCATTCACCACCAC+TGG | 0.560807 | 8_2:-69902929 | Msa1265520:intron |
AAACAAACCATATCTTCCCT+TGG | 0.565168 | 8_2:-69901302 | Msa1265520:CDS |
AATAATGGCACCAGTTGCAA+AGG | 0.570603 | 8_2:+69901264 | None:intergenic |
TGTATAAAACCTGCATGTGA+AGG | 0.571434 | 8_2:+69900062 | None:intergenic |
AGTTTAAATCATTATTGCGA+AGG | 0.584363 | 8_2:-69902294 | Msa1265520:CDS |
TTGAACTATAACAGCACGAA+CGG | 0.585160 | 8_2:+69900096 | None:intergenic |
AGTACGTTTAGGTCAGAAGC+GGG | 0.589952 | 8_2:-69899398 | Msa1265520:intron |
AGTTGCAAAGGAATATTCTC+CGG | 0.590284 | 8_2:+69901276 | None:intergenic |
TCCATAAGCCAATTCAAGAA+GGG | 0.593760 | 8_2:+69899281 | None:intergenic |
CTGATAATTTCTCCACTGCA+AGG | 0.606965 | 8_2:+69901924 | None:intergenic |
ATGAAAAGAGCCCAAAACAA+TGG | 0.618159 | 8_2:+69901090 | None:intergenic |
CAGTACGTTTAGGTCAGAAG+CGG | 0.623731 | 8_2:-69899399 | Msa1265520:CDS |
AAAGACTATATAGGTATAGA+CGG | 0.624585 | 8_2:-69897079 | Msa1265520:three_prime_UTR |
AAATCTGTAGAAAGCATCCA+GGG | 0.627217 | 8_2:+69902143 | None:intergenic |
GAATATTCTCCGGATGCCAA+GGG | 0.633819 | 8_2:+69901286 | None:intergenic |
AAATCTCTTCCATCTCAACA+GGG | 0.638024 | 8_2:+69900147 | None:intergenic |
AGTATACATCATGCATGCAG+AGG | 0.643931 | 8_2:+69897142 | None:intergenic |
TTTAAATCATTATTGCGAAG+GGG | 0.646603 | 8_2:-69902292 | Msa1265520:CDS |
AATATAAATGTTCATAAACA+GGG | 0.649234 | 8_2:+69901746 | None:intergenic |
GTCCGATGTTGAAATAGACA+AGG | 0.665037 | 8_2:-69901706 | Msa1265520:intron |
AGATGTTGTTCCAACTACAA+GGG | 0.670870 | 8_2:+69899254 | None:intergenic |
GGATTCAAAAGATTGTTCAG+GGG | 0.676357 | 8_2:+69902215 | None:intergenic |
ACTGTGCCAATAACCGTGTG+TGG | 0.678607 | 8_2:+69902114 | None:intergenic |
TATTGTTCTTATGTATCACG+AGG | 0.692656 | 8_2:-69903238 | Msa1265520:intron |
AATCTCTTCCATCTCAACAG+GGG | 0.710194 | 8_2:+69900148 | None:intergenic |
GTTGATATTGATACCAGTGG+TGG | 0.738459 | 8_2:+69902916 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTCACTTTTTTTTT+TGG | - | chr8_2:69897426-69897445 | Msa1265520:exon | 10.0% |
!! | TAAATTCTTAATTGATTAAT+AGG | - | chr8_2:69899571-69899590 | Msa1265520:intron | 10.0% |
!! | TTTACATTAAGATTAAAATA+AGG | + | chr8_2:69901418-69901437 | None:intergenic | 10.0% |
!!! | TTTTTAGTTTTTTTCATAAT+AGG | + | chr8_2:69903047-69903066 | None:intergenic | 10.0% |
!!! | AAAATGAGTATAATATTTTG+AGG | - | chr8_2:69897955-69897974 | Msa1265520:intron | 15.0% |
!! | AATATAAATGTTCATAAACA+GGG | + | chr8_2:69898541-69898560 | None:intergenic | 15.0% |
!! | TTTATGAACATTTATATTGT+TGG | - | chr8_2:69898543-69898562 | Msa1265520:intron | 15.0% |
!!! | AATAATTTGTAAGATGTAAA+AGG | + | chr8_2:69898900-69898919 | None:intergenic | 15.0% |
!! | TTTACATCTTACAAATTATT+TGG | - | chr8_2:69898900-69898919 | Msa1265520:intron | 15.0% |
!! | AAAACTATTTCAATTAAATG+TGG | - | chr8_2:69899461-69899480 | Msa1265520:intron | 15.0% |
!! | AAACTATTTCAATTAAATGT+GGG | - | chr8_2:69899462-69899481 | Msa1265520:intron | 15.0% |
!! | ATATATTAATCTATAGATAG+TGG | + | chr8_2:69900382-69900401 | None:intergenic | 15.0% |
!! | TTTAATTAATACTGTTGAAA+AGG | + | chr8_2:69900453-69900472 | None:intergenic | 15.0% |
!!! | CATTTTAACAATGATATTAT+TGG | - | chr8_2:69900514-69900533 | Msa1265520:intron | 15.0% |
!! | AATTAAGTAAAACAGAAAAA+CGG | - | chr8_2:69901464-69901483 | Msa1265520:intron | 15.0% |
!!! | AATTATAGTTTTATTCTTTC+AGG | + | chr8_2:69901548-69901567 | None:intergenic | 15.0% |
!! | AATTCAAGATTATAAATAGT+TGG | + | chr8_2:69902381-69902400 | None:intergenic | 15.0% |
!! | AAGTGAAAAAAAATGAAATC+TGG | + | chr8_2:69897419-69897438 | None:intergenic | 20.0% |
!! | ATAGTTGAATAATAATAAGC+TGG | + | chr8_2:69897584-69897603 | None:intergenic | 20.0% |
!!! | GTTGTTTTTATAAATTCTCT+CGG | + | chr8_2:69897693-69897712 | None:intergenic | 20.0% |
!! | ACAACTTATAAATAATCTCA+CGG | + | chr8_2:69897805-69897824 | None:intergenic | 20.0% |
!!! | GTAACTTCAATTTTTTTTCT+AGG | - | chr8_2:69897894-69897913 | Msa1265520:intron | 20.0% |
!!! | TTTTGATCCAAAAAACATTT+TGG | - | chr8_2:69898103-69898122 | Msa1265520:intron | 20.0% |
!! | AATATTGACCATAAAATTTG+AGG | + | chr8_2:69898236-69898255 | None:intergenic | 20.0% |
!! | TAAACTTGAAAGAGAAATAA+CGG | + | chr8_2:69898435-69898454 | None:intergenic | 20.0% |
!! | AAAAACAATTATGAAGTTAG+GGG | + | chr8_2:69898483-69898502 | None:intergenic | 20.0% |
!! | CAAAAACAATTATGAAGTTA+GGG | + | chr8_2:69898484-69898503 | None:intergenic | 20.0% |
!! | ACAAAAACAATTATGAAGTT+AGG | + | chr8_2:69898485-69898504 | None:intergenic | 20.0% |
!!! | GTTTGTTTTATTTATGTTTC+AGG | - | chr8_2:69898503-69898522 | Msa1265520:intron | 20.0% |
!! | CAATATAAATGTTCATAAAC+AGG | + | chr8_2:69898542-69898561 | None:intergenic | 20.0% |
!! | ACTATTAGAATAAAACAATC+TGG | - | chr8_2:69898611-69898630 | Msa1265520:intron | 20.0% |
!!! | CTGCATCATATTTTTTATAT+TGG | + | chr8_2:69898681-69898700 | None:intergenic | 20.0% |
!! | GTAAAATATCAGTGAAAAAT+GGG | + | chr8_2:69899084-69899103 | None:intergenic | 20.0% |
!! | TGTAAAATATCAGTGAAAAA+TGG | + | chr8_2:69899085-69899104 | None:intergenic | 20.0% |
!! | TAATGCATTAAAAATGTGAA+AGG | + | chr8_2:69899289-69899308 | None:intergenic | 20.0% |
!!! | AAATTCAATTGCATTTTTAC+TGG | - | chr8_2:69899615-69899634 | Msa1265520:CDS | 20.0% |
!! | TTTATATCAGATAGAAAATG+TGG | + | chr8_2:69899666-69899685 | None:intergenic | 20.0% |
!!! | AATTCATCTTTTTTATCAGA+AGG | - | chr8_2:69899893-69899912 | Msa1265520:intron | 20.0% |
!!! | ATTCATCTTTTTTATCAGAA+GGG | - | chr8_2:69899894-69899913 | Msa1265520:intron | 20.0% |
!!! | AATCTTTATCCCAAAATTTT+TGG | - | chr8_2:69900320-69900339 | Msa1265520:intron | 20.0% |
!! | TATTACTTATCAGAGAATAA+AGG | + | chr8_2:69900429-69900448 | None:intergenic | 20.0% |
!!! | TGTTTGAATTCTGATATTTT+CGG | - | chr8_2:69900590-69900609 | Msa1265520:intron | 20.0% |
!!! | TATTTTATCTCCTTCAATAT+CGG | + | chr8_2:69900846-69900865 | None:intergenic | 20.0% |
!! | ATTGAAGGAGATAAAATATT+TGG | - | chr8_2:69900848-69900867 | Msa1265520:intron | 20.0% |
!!! | TGTTGACTATTTCAAATTAA+GGG | + | chr8_2:69901320-69901339 | None:intergenic | 20.0% |
!!! | TTGTTGACTATTTCAAATTA+AGG | + | chr8_2:69901321-69901340 | None:intergenic | 20.0% |
!! | AATACAATTAATATGACTAG+CGG | + | chr8_2:69901503-69901522 | None:intergenic | 20.0% |
!!! | ATGTTGCATTTTCTATAAAT+TGG | - | chr8_2:69901682-69901701 | Msa1265520:intron | 20.0% |
!! | AAAGGATTGTTAAAATAGTT+CGG | + | chr8_2:69901740-69901759 | None:intergenic | 20.0% |
!!! | AACAATCAATTTTGATTGTT+AGG | + | chr8_2:69902225-69902244 | None:intergenic | 20.0% |
!! | AGAATAAAGTTAAAAATTGC+TGG | + | chr8_2:69902449-69902468 | None:intergenic | 20.0% |
!!! | TTACTGTTTATCATTCTTTT+TGG | - | chr8_2:69902597-69902616 | Msa1265520:intron | 20.0% |
!! | CAACATCGTTATTAAAAAAA+CGG | - | chr8_2:69902655-69902674 | Msa1265520:intron | 20.0% |
!! | TACTTTATATGTGAAAAAGA+CGG | + | chr8_2:69902763-69902782 | None:intergenic | 20.0% |
!! | ACCAATTATAAAATCAAAGA+TGG | + | chr8_2:69902931-69902950 | None:intergenic | 20.0% |
!!! | TTTTTGTTTTTAGCTTATAG+TGG | - | chr8_2:69902994-69903013 | Msa1265520:intron | 20.0% |
!! | GAAAAAAACTAAAAAAACTC+TGG | - | chr8_2:69903052-69903071 | Msa1265520:intron | 20.0% |
! | ACAATAATAGTACATGTTAG+TGG | - | chr8_2:69897101-69897120 | Msa1265520:three_prime_UTR | 25.0% |
! | AATACAACTAAATCTGTCTT+TGG | - | chr8_2:69897232-69897251 | Msa1265520:three_prime_UTR | 25.0% |
! | TAATTCAAAGAAGAAAGCAA+TGG | + | chr8_2:69897285-69897304 | None:intergenic | 25.0% |
!! | TTGAATTATTGCAGTTTTCA+TGG | - | chr8_2:69897297-69897316 | Msa1265520:three_prime_UTR | 25.0% |
! | CAACTTATAAATAATCTCAC+GGG | + | chr8_2:69897804-69897823 | None:intergenic | 25.0% |
!!! | ATTTTGAATTTTTTTGTGCC+TGG | + | chr8_2:69897940-69897959 | None:intergenic | 25.0% |
!!! | AGTATAATATTTTGAGGTTC+TGG | - | chr8_2:69897961-69897980 | Msa1265520:intron | 25.0% |
! | TCGCAATAATGATTTAAACT+TGG | + | chr8_2:69897990-69898009 | None:intergenic | 25.0% |
! | AGTTTAAATCATTATTGCGA+AGG | - | chr8_2:69897990-69898009 | Msa1265520:intron | 25.0% |
! | GTTTAAATCATTATTGCGAA+GGG | - | chr8_2:69897991-69898010 | Msa1265520:intron | 25.0% |
! | TTTAAATCATTATTGCGAAG+GGG | - | chr8_2:69897992-69898011 | Msa1265520:intron | 25.0% |
!! | GAACTAATCCTCAAATTTTA+TGG | - | chr8_2:69898225-69898244 | Msa1265520:intron | 25.0% |
! | ATCTGTATGAATCACTTATT+TGG | - | chr8_2:69898267-69898286 | Msa1265520:intron | 25.0% |
!! | TTTGGATGATTGTCTTATTA+TGG | - | chr8_2:69898285-69898304 | Msa1265520:intron | 25.0% |
!! | TTGGATGATTGTCTTATTAT+GGG | - | chr8_2:69898286-69898305 | Msa1265520:intron | 25.0% |
! | AATACACCTGTAAAAAATAG+CGG | + | chr8_2:69898394-69898413 | None:intergenic | 25.0% |
! | GCGCAAAATTAATTTATTAG+AGG | + | chr8_2:69898638-69898657 | None:intergenic | 25.0% |
!! | ATAAATTAATTTTGCGCCTT+TGG | - | chr8_2:69898641-69898660 | Msa1265520:intron | 25.0% |
!! | TAAATTAATTTTGCGCCTTT+GGG | - | chr8_2:69898642-69898661 | Msa1265520:intron | 25.0% |
!! | TGTTTCTAAATATCCAACTT+TGG | + | chr8_2:69898725-69898744 | None:intergenic | 25.0% |
! | TCAATATATAAACCAGAGTT+TGG | + | chr8_2:69898820-69898839 | None:intergenic | 25.0% |
! | ACATCTTACAAATTATTTGG+AGG | - | chr8_2:69898903-69898922 | Msa1265520:intron | 25.0% |
! | TGAAGAAGATACAACAATAA+TGG | + | chr8_2:69899038-69899057 | None:intergenic | 25.0% |
! | AAAAATGGGATGAATCTATA+TGG | + | chr8_2:69899070-69899089 | None:intergenic | 25.0% |
!! | ATTCTCTTTTACAGAGTTTT+TGG | - | chr8_2:69899147-69899166 | Msa1265520:intron | 25.0% |
! | TTAAAAATGTGAAAGGAGAA+AGG | + | chr8_2:69899282-69899301 | None:intergenic | 25.0% |
! | ACATGGAAAAGTTAAAGAAA+TGG | + | chr8_2:69899436-69899455 | None:intergenic | 25.0% |
!! | TGAAATAGTTTTTCTCTACA+TGG | + | chr8_2:69899453-69899472 | None:intergenic | 25.0% |
!!! | TTCATCTTTTTTATCAGAAG+GGG | - | chr8_2:69899895-69899914 | Msa1265520:intron | 25.0% |
!!! | AATTAAACTTTTGGGATAGT+TGG | + | chr8_2:69899979-69899998 | None:intergenic | 25.0% |
!! | ACCTGATCAATTAAACTTTT+GGG | + | chr8_2:69899987-69900006 | None:intergenic | 25.0% |
! | TCAAATAACTCTTCAAAATG+TGG | + | chr8_2:69900063-69900082 | None:intergenic | 25.0% |
! | TTTGAAGAGTTATTTGATGA+TGG | - | chr8_2:69900066-69900085 | Msa1265520:intron | 25.0% |
!! | GAAAGTTTTCAAAAGACAAA+AGG | + | chr8_2:69900111-69900130 | None:intergenic | 25.0% |
!!! | TTTGTCTTTTGAAAACTTTC+AGG | - | chr8_2:69900111-69900130 | Msa1265520:CDS | 25.0% |
! | AATAGTTGGTCATTAATTGA+AGG | + | chr8_2:69900354-69900373 | None:intergenic | 25.0% |
! | ATTAAAGTGAAAGAGATGAA+TGG | - | chr8_2:69900467-69900486 | Msa1265520:intron | 25.0% |
! | TTAAAGTGAAAGAGATGAAT+GGG | - | chr8_2:69900468-69900487 | Msa1265520:intron | 25.0% |
!!! | TGAATGGGGAATTTTTTTAA+AGG | - | chr8_2:69900483-69900502 | Msa1265520:intron | 25.0% |
! | TCAGAATTCAAACATAGATT+TGG | + | chr8_2:69900584-69900603 | None:intergenic | 25.0% |
! | CCTATATAAATTCAGTACAA+AGG | + | chr8_2:69900817-69900836 | None:intergenic | 25.0% |
! | CCTTTGTACTGAATTTATAT+AGG | - | chr8_2:69900814-69900833 | Msa1265520:intron | 25.0% |
!! | ATTTTATCTCCTTCAATATC+GGG | + | chr8_2:69900845-69900864 | None:intergenic | 25.0% |
! | GAGTAATTTAGATTACATCT+TGG | - | chr8_2:69901145-69901164 | Msa1265520:intron | 25.0% |
! | AAGTCAACAACAATCTATAA+AGG | - | chr8_2:69901252-69901271 | Msa1265520:CDS | 25.0% |
! | TTCAAATTAAGGGGTAAAAT+TGG | + | chr8_2:69901310-69901329 | None:intergenic | 25.0% |
! | GTTGACTATTTCAAATTAAG+GGG | + | chr8_2:69901319-69901338 | None:intergenic | 25.0% |
!! | TTAAAATAGTTCGGTACTTT+TGG | + | chr8_2:69901731-69901750 | None:intergenic | 25.0% |
!! | AAAACCTCTCTTTTCTTTTA+CGG | - | chr8_2:69902042-69902061 | Msa1265520:intron | 25.0% |
! | TTCCAAATTAATAGGGATTT+GGG | + | chr8_2:69902111-69902130 | None:intergenic | 25.0% |
! | CAATCAAAATTGATTGTTCA+TGG | - | chr8_2:69902227-69902246 | Msa1265520:CDS | 25.0% |
! | TAAACAAAAGTTGAAGACTA+GGG | + | chr8_2:69902266-69902285 | None:intergenic | 25.0% |
! | TTAAACAAAAGTTGAAGACT+AGG | + | chr8_2:69902267-69902286 | None:intergenic | 25.0% |
! | AAAGTTAAAAATTGCTGGAA+AGG | + | chr8_2:69902444-69902463 | None:intergenic | 25.0% |
!!! | TTCCATGTTTTGAGAAATAA+TGG | - | chr8_2:69902695-69902714 | Msa1265520:intron | 25.0% |
!! | AACCATTATTTCTCAAAACA+TGG | + | chr8_2:69902700-69902719 | None:intergenic | 25.0% |
!!! | GCCATCTTTGATTTTATAAT+TGG | - | chr8_2:69902927-69902946 | Msa1265520:intron | 25.0% |
! | TTAACTGCAATTGTAAATGA+AGG | - | chr8_2:69902951-69902970 | Msa1265520:CDS | 25.0% |
! | TAACTGCAATTGTAAATGAA+GGG | - | chr8_2:69902952-69902971 | Msa1265520:CDS | 25.0% |
! | CATCAACTAAAAGACTATAT+AGG | - | chr8_2:69903196-69903215 | Msa1265520:intron | 25.0% |
! | AAAGACTATATAGGTATAGA+CGG | - | chr8_2:69903205-69903224 | Msa1265520:intron | 25.0% |
TATTGTTCTTATGTATCACG+AGG | - | chr8_2:69897046-69897065 | Msa1265520:three_prime_UTR | 30.0% | |
AGAAACAGGTGTCAATAATT+CGG | + | chr8_2:69897152-69897171 | None:intergenic | 30.0% | |
TTCATGGATTCATTACTTGT+TGG | - | chr8_2:69897313-69897332 | Msa1265520:three_prime_UTR | 30.0% | |
AATGAATATGAGCATGACTT+AGG | + | chr8_2:69897346-69897365 | None:intergenic | 30.0% | |
AAAATGAAATCTGGAAGAAG+AGG | + | chr8_2:69897410-69897429 | None:intergenic | 30.0% | |
AATCCAAACAATCCCTTAAA+TGG | + | chr8_2:69897621-69897640 | None:intergenic | 30.0% | |
GTGAGTAAATAAGCTCAAAT+AGG | + | chr8_2:69897774-69897793 | None:intergenic | 30.0% | |
CTATTGCATTCTTGATATGT+AGG | + | chr8_2:69898029-69898048 | None:intergenic | 30.0% | |
!!! | ATGTTTTTTGGATCAAAAGC+AGG | + | chr8_2:69898101-69898120 | None:intergenic | 30.0% |
!!! | ACAGTGTCCAAAATGTTTTT+TGG | + | chr8_2:69898113-69898132 | None:intergenic | 30.0% |
TTAGTTCAGAGTAAATCTGA+GGG | + | chr8_2:69898212-69898231 | None:intergenic | 30.0% | |
ATTAGTTCAGAGTAAATCTG+AGG | + | chr8_2:69898213-69898232 | None:intergenic | 30.0% | |
! | TGGATGATTGTCTTATTATG+GGG | - | chr8_2:69898287-69898306 | Msa1265520:intron | 30.0% |
ACAGGCATTAAGCATAATTT+CGG | - | chr8_2:69898330-69898349 | Msa1265520:intron | 30.0% | |
ATACACCTGTAAAAAATAGC+GGG | + | chr8_2:69898393-69898412 | None:intergenic | 30.0% | |
!!! | GCTATTTTTTACAGGTGTAT+TGG | - | chr8_2:69898393-69898412 | Msa1265520:intron | 30.0% |
!!! | ATTTTTTACAGGTGTATTGG+AGG | - | chr8_2:69898396-69898415 | Msa1265520:intron | 30.0% |
!! | AAAGAGAAATAACGGATTTG+GGG | + | chr8_2:69898427-69898446 | None:intergenic | 30.0% |
!! | GAAAGAGAAATAACGGATTT+GGG | + | chr8_2:69898428-69898447 | None:intergenic | 30.0% |
!! | TGAAAGAGAAATAACGGATT+TGG | + | chr8_2:69898429-69898448 | None:intergenic | 30.0% |
TACCTTGTCTATTTCAACAT+CGG | + | chr8_2:69898583-69898602 | None:intergenic | 30.0% | |
TTATTGTAGTCTCTGATATG+TGG | - | chr8_2:69898858-69898877 | Msa1265520:intron | 30.0% | |
TATTTGGAGGAACTATCATA+TGG | - | chr8_2:69898916-69898935 | Msa1265520:intron | 30.0% | |
TGTTGTATCTTCTTCAATTC+TGG | - | chr8_2:69899042-69899061 | Msa1265520:intron | 30.0% | |
!! | TTTTCATCAGTTTTGTGCTA+GGG | - | chr8_2:69899210-69899229 | Msa1265520:intron | 30.0% |
TATCATACTCGTTAAGGATT+CGG | - | chr8_2:69899361-69899380 | Msa1265520:intron | 30.0% | |
ACATTTGTCACCATGATATT+TGG | + | chr8_2:69899403-69899422 | None:intergenic | 30.0% | |
ACCTAGTAACTTAAACGTTT+GGG | + | chr8_2:69899764-69899783 | None:intergenic | 30.0% | |
ATATAAGTGGATGTGTGTAT+TGG | + | chr8_2:69899865-69899884 | None:intergenic | 30.0% | |
GAATTCCAACACAATATAAG+TGG | + | chr8_2:69899878-69899897 | None:intergenic | 30.0% | |
TCCCAAAAGTTTAATTGATC+AGG | - | chr8_2:69899983-69900002 | Msa1265520:intron | 30.0% | |
! | CACCTGATCAATTAAACTTT+TGG | + | chr8_2:69899988-69900007 | None:intergenic | 30.0% |
CAAAAGTTTAATTGATCAGG+TGG | - | chr8_2:69899986-69900005 | Msa1265520:intron | 30.0% | |
! | CAATAGCTTATTGTGCTTTT+TGG | - | chr8_2:69900243-69900262 | Msa1265520:intron | 30.0% |
!! | TTATCCCAAAATTTTTGGAC+TGG | - | chr8_2:69900325-69900344 | Msa1265520:intron | 30.0% |
! | GAAACCAGTCCAAAAATTTT+GGG | + | chr8_2:69900332-69900351 | None:intergenic | 30.0% |
! | AGATAGTGGTTTCAAATAGT+TGG | + | chr8_2:69900368-69900387 | None:intergenic | 30.0% |
TAAAGTGAAAGAGATGAATG+GGG | - | chr8_2:69900469-69900488 | Msa1265520:intron | 30.0% | |
CAATGATATTATTGGAAGCA+TGG | - | chr8_2:69900522-69900541 | Msa1265520:intron | 30.0% | |
GAATTCAAACATAGATTTGG+TGG | + | chr8_2:69900581-69900600 | None:intergenic | 30.0% | |
! | AATGGTCTTGAAAAGACAAT+TGG | + | chr8_2:69900660-69900679 | None:intergenic | 30.0% |
TGTAGTTATAGCATTGTTCA+AGG | - | chr8_2:69900713-69900732 | Msa1265520:intron | 30.0% | |
TCAGTACAAAGGTTTGTATT+AGG | + | chr8_2:69900806-69900825 | None:intergenic | 30.0% | |
CTAAACGTACTGAAAAAGAT+TGG | + | chr8_2:69900877-69900896 | None:intergenic | 30.0% | |
!!! | CAATCTTTTTCAGTACGTTT+AGG | - | chr8_2:69900875-69900894 | Msa1265520:intron | 30.0% |
CCTATGGAGTAAAATTGTTA+CGG | - | chr8_2:69901058-69901077 | Msa1265520:CDS | 30.0% | |
ATTAAGGGGTAAAATTGGAA+AGG | + | chr8_2:69901305-69901324 | None:intergenic | 30.0% | |
TAGAAACAATCCACAACAAT+AGG | - | chr8_2:69901344-69901363 | Msa1265520:intron | 30.0% | |
! | CTGCACTTTTATGGAATATT+TGG | - | chr8_2:69901621-69901640 | Msa1265520:intron | 30.0% |
! | CACTTTTATGGAATATTTGG+TGG | - | chr8_2:69901624-69901643 | Msa1265520:intron | 30.0% |
ATAGAAAATGCAACATGAGA+AGG | + | chr8_2:69901678-69901697 | None:intergenic | 30.0% | |
!!! | TGTTTTTGAGTGAGTATAAC+CGG | + | chr8_2:69901813-69901832 | None:intergenic | 30.0% |
! | ATTTTGTAGGAGAATTTTCC+AGG | + | chr8_2:69901859-69901878 | None:intergenic | 30.0% |
GAAAGAATACTAGACTATCA+TGG | - | chr8_2:69901943-69901962 | Msa1265520:CDS | 30.0% | |
TGGTTCAAAAAAGATGAAAG+AGG | - | chr8_2:69901963-69901982 | Msa1265520:intron | 30.0% | |
GGTTCAAAAAAGATGAAAGA+GGG | - | chr8_2:69901964-69901983 | Msa1265520:intron | 30.0% | |
GTTCAAAAAAGATGAAAGAG+GGG | - | chr8_2:69901965-69901984 | Msa1265520:intron | 30.0% | |
TCCAAATTAATAGGGATTTG+GGG | + | chr8_2:69902110-69902129 | None:intergenic | 30.0% | |
CTTCCAAATTAATAGGGATT+TGG | + | chr8_2:69902112-69902131 | None:intergenic | 30.0% | |
CTGCTTCTTCCAAATTAATA+GGG | + | chr8_2:69902118-69902137 | None:intergenic | 30.0% | |
TAGGGAAATATTTCCATAGT+AGG | + | chr8_2:69902331-69902350 | None:intergenic | 30.0% | |
TGGAAATATTTCCCTAGTAA+TGG | - | chr8_2:69902335-69902354 | Msa1265520:intron | 30.0% | |
! | GCTTTTCAAATCTACAGATT+TGG | + | chr8_2:69902530-69902549 | None:intergenic | 30.0% |
AAACATGTAGAAGGATGTTA+TGG | + | chr8_2:69902560-69902579 | None:intergenic | 30.0% | |
AAACTCAAATGATAAACAGC+AGG | + | chr8_2:69902628-69902647 | None:intergenic | 30.0% | |
TCCAATTGAAATGCAAAAGA+TGG | - | chr8_2:69902737-69902756 | Msa1265520:intron | 30.0% | |
!! | AAATGAAGGGTTATTTCTGT+TGG | - | chr8_2:69902965-69902984 | Msa1265520:CDS | 30.0% |
!! | AATGAAGGGTTATTTCTGTT+GGG | - | chr8_2:69902966-69902985 | Msa1265520:CDS | 30.0% |
GATGTTGATATTGATACCAG+TGG | + | chr8_2:69897374-69897393 | None:intergenic | 35.0% | |
ATAAGCTGGAAAATGTTCCA+GGG | + | chr8_2:69897570-69897589 | None:intergenic | 35.0% | |
AATAAGCTGGAAAATGTTCC+AGG | + | chr8_2:69897571-69897590 | None:intergenic | 35.0% | |
TGACCATTTAAGGGATTGTT+TGG | - | chr8_2:69897615-69897634 | Msa1265520:intron | 35.0% | |
! | GATCTTTTCGTAAGCTATCT+TGG | + | chr8_2:69897852-69897871 | None:intergenic | 35.0% |
GGATTCAAAAGATTGTTCAG+GGG | + | chr8_2:69898072-69898091 | None:intergenic | 35.0% | |
CGGATTCAAAAGATTGTTCA+GGG | + | chr8_2:69898073-69898092 | None:intergenic | 35.0% | |
TCGGATTCAAAAGATTGTTC+AGG | + | chr8_2:69898074-69898093 | None:intergenic | 35.0% | |
!! | AAATCTGTAGAAAGCATCCA+GGG | + | chr8_2:69898144-69898163 | None:intergenic | 35.0% |
!! | AAAATCTGTAGAAAGCATCC+AGG | + | chr8_2:69898145-69898164 | None:intergenic | 35.0% |
! | ATGCTTTCTACAGATTTTCC+AGG | - | chr8_2:69898147-69898166 | Msa1265520:intron | 35.0% |
TAGTTCAGAGTAAATCTGAG+GGG | + | chr8_2:69898211-69898230 | None:intergenic | 35.0% | |
!!! | ATATCCCCGCTATTTTTTAC+AGG | - | chr8_2:69898385-69898404 | Msa1265520:intron | 35.0% |
TACACCTGTAAAAAATAGCG+GGG | + | chr8_2:69898392-69898411 | None:intergenic | 35.0% | |
TAAATATCCTATTGCTCCCT+TGG | - | chr8_2:69898453-69898472 | Msa1265520:intron | 35.0% | |
GCTCTTAGTTAATCCAAAGT+TGG | - | chr8_2:69898709-69898728 | Msa1265520:intron | 35.0% | |
!! | TGATTTTGACAACCAAACTC+TGG | - | chr8_2:69898805-69898824 | Msa1265520:intron | 35.0% |
! | GTAAAAGGATGTGTGTTTTC+TGG | + | chr8_2:69898885-69898904 | None:intergenic | 35.0% |
AAACAAACCATATCTTCCCT+TGG | - | chr8_2:69898982-69899001 | Msa1265520:intron | 35.0% | |
AGTTGCAAAGGAATATTCTC+CGG | + | chr8_2:69899011-69899030 | None:intergenic | 35.0% | |
ATGAAAAGAGCCCAAAACAA+TGG | + | chr8_2:69899197-69899216 | None:intergenic | 35.0% | |
!! | CTTTTCATCAGTTTTGTGCT+AGG | - | chr8_2:69899209-69899228 | Msa1265520:intron | 35.0% |
GAACAGTATCATACTCGTTA+AGG | - | chr8_2:69899355-69899374 | Msa1265520:intron | 35.0% | |
!! | GCTTGCTTTTCCAAATATCA+TGG | - | chr8_2:69899390-69899409 | Msa1265520:intron | 35.0% |
! | TCCCAAACGTTTAAGTTACT+AGG | - | chr8_2:69899760-69899779 | Msa1265520:intron | 35.0% |
CACCTAGTAACTTAAACGTT+TGG | + | chr8_2:69899765-69899784 | None:intergenic | 35.0% | |
CACATCCACTTATATTGTGT+TGG | - | chr8_2:69899870-69899889 | Msa1265520:intron | 35.0% | |
!!! | ATCTTTTTTATCAGAAGGGG+CGG | - | chr8_2:69899898-69899917 | Msa1265520:intron | 35.0% |
TCTAGATCACTTGGTCATAA+AGG | - | chr8_2:69899933-69899952 | Msa1265520:intron | 35.0% | |
!!! | CTTTTGGGATAGTTGGTTTA+TGG | + | chr8_2:69899972-69899991 | None:intergenic | 35.0% |
AAATCTCTTCCATCTCAACA+GGG | + | chr8_2:69900140-69900159 | None:intergenic | 35.0% | |
TTGAACTATAACAGCACGAA+CGG | + | chr8_2:69900191-69900210 | None:intergenic | 35.0% | |
TGTATAAAACCTGCATGTGA+AGG | + | chr8_2:69900225-69900244 | None:intergenic | 35.0% | |
!! | TAGCTTATTGTGCTTTTTGG+AGG | - | chr8_2:69900246-69900265 | Msa1265520:intron | 35.0% |
! | GGAAACCAGTCCAAAAATTT+TGG | + | chr8_2:69900333-69900352 | None:intergenic | 35.0% |
!! | TCAAACATAGATTTGGTGGA+TGG | + | chr8_2:69900577-69900596 | None:intergenic | 35.0% |
AATGCAGTTGCAAAGATCAA+TGG | + | chr8_2:69900678-69900697 | None:intergenic | 35.0% | |
TAGGATATACCCGATATTGA+AGG | - | chr8_2:69900833-69900852 | Msa1265520:intron | 35.0% | |
GACAACCATGGGATAAAAAA+GGG | + | chr8_2:69900945-69900964 | None:intergenic | 35.0% | |
! | CTAATCTCTGACAGGTATTT+TGG | - | chr8_2:69900970-69900989 | Msa1265520:intron | 35.0% |
AGATGTTGTTCCAACTACAA+GGG | + | chr8_2:69901033-69901052 | None:intergenic | 35.0% | |
AAGATGTTGTTCCAACTACA+AGG | + | chr8_2:69901034-69901053 | None:intergenic | 35.0% | |
! | CCGTAACAATTTTACTCCAT+AGG | + | chr8_2:69901061-69901080 | None:intergenic | 35.0% |
TAAAGGTAGTAAACCCTTTG+AGG | - | chr8_2:69901269-69901288 | Msa1265520:CDS | 35.0% | |
! | CATAAAAGTGCAGCATGAAA+AGG | + | chr8_2:69901614-69901633 | None:intergenic | 35.0% |
! | CTTTTCATGCTGCACTTTTA+TGG | - | chr8_2:69901612-69901631 | Msa1265520:intron | 35.0% |
AAAATGCAACATGAGAAGGA+AGG | + | chr8_2:69901674-69901693 | None:intergenic | 35.0% | |
ACTAAAGGGATAGTGAAAAC+TGG | + | chr8_2:69901776-69901795 | None:intergenic | 35.0% | |
ATGGGTGGAATCAAACTAAA+GGG | + | chr8_2:69901790-69901809 | None:intergenic | 35.0% | |
! | GGACAATTTTGCATTAGACT+GGG | + | chr8_2:69901838-69901857 | None:intergenic | 35.0% |
! | AGGACAATTTTGCATTAGAC+TGG | + | chr8_2:69901839-69901858 | None:intergenic | 35.0% |
AGTCTAATGCAAAATTGTCC+TGG | - | chr8_2:69901838-69901857 | Msa1265520:intron | 35.0% | |
AAAAAAGATGAAAGAGGGGT+TGG | - | chr8_2:69901969-69901988 | Msa1265520:intron | 35.0% | |
GATACCGTAAAAGAAAAGAG+AGG | + | chr8_2:69902049-69902068 | None:intergenic | 35.0% | |
CCAAATTAATAGGGATTTGG+GGG | + | chr8_2:69902109-69902128 | None:intergenic | 35.0% | |
GCTGCTTCTTCCAAATTAAT+AGG | + | chr8_2:69902119-69902138 | None:intergenic | 35.0% | |
CATTATTCAGCGCAATATGA+CGG | - | chr8_2:69902287-69902306 | Msa1265520:CDS | 35.0% | |
ATATTTCCATAGTAGGCACT+AGG | + | chr8_2:69902324-69902343 | None:intergenic | 35.0% | |
CAACAGAAACACCATTACTA+GGG | + | chr8_2:69902349-69902368 | None:intergenic | 35.0% | |
! | TTTTCCAATGTGTTAGAGTC+TGG | - | chr8_2:69902468-69902487 | Msa1265520:intron | 35.0% |
TTTCCAATGTGTTAGAGTCT+GGG | - | chr8_2:69902469-69902488 | Msa1265520:intron | 35.0% | |
CATCCTTCTACATGTTTATC+TGG | - | chr8_2:69902563-69902582 | Msa1265520:intron | 35.0% | |
CTTCCAGATAAACATGTAGA+AGG | + | chr8_2:69902569-69902588 | None:intergenic | 35.0% | |
CTTCTACATGTTTATCTGGA+AGG | - | chr8_2:69902567-69902586 | Msa1265520:intron | 35.0% | |
! | GCCATCTTTTGCATTTCAAT+TGG | + | chr8_2:69902741-69902760 | None:intergenic | 35.0% |
! | CTCATCTAACTAAAGGTATG+AGG | + | chr8_2:69902845-69902864 | None:intergenic | 35.0% |
CTGCATTCTCATCTAACTAA+AGG | + | chr8_2:69902852-69902871 | None:intergenic | 35.0% | |
!! | AATGATGCTGCTTTAGTCAT+CGG | - | chr8_2:69902905-69902924 | Msa1265520:intron | 35.0% |
!! | ATTCGTGCCTTTTATTTCGA+TGG | - | chr8_2:69903098-69903117 | Msa1265520:intron | 35.0% |
CAAGACTCCATCGAAATAAA+AGG | + | chr8_2:69903108-69903127 | None:intergenic | 35.0% | |
!! | TGACACCTGTTTCTACATCT+TGG | - | chr8_2:69897158-69897177 | Msa1265520:three_prime_UTR | 40.0% |
TGAAGCCAAGATGTAGAAAC+AGG | + | chr8_2:69897166-69897185 | None:intergenic | 40.0% | |
! | ATCTGTCTTTGGTAATTCGC+AGG | - | chr8_2:69897243-69897262 | Msa1265520:three_prime_UTR | 40.0% |
TCATATTCATTCACCACCAC+TGG | - | chr8_2:69897355-69897374 | Msa1265520:three_prime_UTR | 40.0% | |
GTTGATATTGATACCAGTGG+TGG | + | chr8_2:69897371-69897390 | None:intergenic | 40.0% | |
TTCAATTCCAAGTATGTCCC+TGG | - | chr8_2:69897550-69897569 | Msa1265520:intron | 40.0% | |
AAATGTTCCAGGGACATACT+TGG | + | chr8_2:69897560-69897579 | None:intergenic | 40.0% | |
ACAATCCCTTAAATGGTCAG+CGG | + | chr8_2:69897614-69897633 | None:intergenic | 40.0% | |
AAATTCTCTCGGAAAGTCTC+AGG | + | chr8_2:69897682-69897701 | None:intergenic | 40.0% | |
TGGATCAAAAGCAGGATGTT+CGG | + | chr8_2:69898093-69898112 | None:intergenic | 40.0% | |
GGACACTGTTAAAAATTCCC+TGG | - | chr8_2:69898124-69898143 | Msa1265520:intron | 40.0% | |
GACTATATCTGTGTTTGGAC+AGG | - | chr8_2:69898312-69898331 | Msa1265520:intron | 40.0% | |
CTGATAATTTCTCCACTGCA+AGG | + | chr8_2:69898363-69898382 | None:intergenic | 40.0% | |
GTCCGATGTTGAAATAGACA+AGG | - | chr8_2:69898578-69898597 | Msa1265520:intron | 40.0% | |
GGAGAATATTCCTTTGCAAC+TGG | - | chr8_2:69899010-69899029 | Msa1265520:intron | 40.0% | |
AATAATGGCACCAGTTGCAA+AGG | + | chr8_2:69899023-69899042 | None:intergenic | 40.0% | |
! | TAGGTTCATGGCCATTGTTT+TGG | - | chr8_2:69899183-69899202 | Msa1265520:intron | 40.0% |
! | AGGTTCATGGCCATTGTTTT+GGG | - | chr8_2:69899184-69899203 | Msa1265520:intron | 40.0% |
GACAAAAGAACTCACGTTGA+TGG | + | chr8_2:69899246-69899265 | None:intergenic | 40.0% | |
! | CGTTTGGGATTGTTAGTTCA+CGG | + | chr8_2:69899749-69899768 | None:intergenic | 40.0% |
AATCTCTTCCATCTCAACAG+GGG | + | chr8_2:69900139-69900158 | None:intergenic | 40.0% | |
CAAATCTCTTCCATCTCAAC+AGG | + | chr8_2:69900141-69900160 | None:intergenic | 40.0% | |
! | AGCATTTTTCCTTCACATGC+AGG | - | chr8_2:69900213-69900232 | Msa1265520:intron | 40.0% |
TTCGCCATTTAGTCCTCAAA+AGG | - | chr8_2:69900403-69900422 | Msa1265520:intron | 40.0% | |
!! | AAGGCCTTTTGAGGACTAAA+TGG | + | chr8_2:69900410-69900429 | None:intergenic | 40.0% |
! | CAGAGAATAAAGGCCTTTTG+AGG | + | chr8_2:69900419-69900438 | None:intergenic | 40.0% |
TGGTGTCTGACTAACTAGTA+TGG | - | chr8_2:69900542-69900561 | Msa1265520:intron | 40.0% | |
! | TCCAGACTTTTGTGTACAAG+AGG | - | chr8_2:69900634-69900653 | Msa1265520:intron | 40.0% |
CGACAACCATGGGATAAAAA+AGG | + | chr8_2:69900946-69900965 | None:intergenic | 40.0% | |
! | GATTAGTTAGCGACAACCAT+GGG | + | chr8_2:69900956-69900975 | None:intergenic | 40.0% |
! | AGATTAGTTAGCGACAACCA+TGG | + | chr8_2:69900957-69900976 | None:intergenic | 40.0% |
GAACAACATCTTCTTGCCTA+TGG | - | chr8_2:69901042-69901061 | Msa1265520:intron | 40.0% | |
ATACTGTGTTTGCACTTTGC+AGG | - | chr8_2:69901106-69901125 | Msa1265520:CDS | 40.0% | |
!! | GTAGTAAACCCTTTGAGGTT+GGG | - | chr8_2:69901274-69901293 | Msa1265520:CDS | 40.0% |
AGGTAAAACCCAACCTCAAA+GGG | + | chr8_2:69901285-69901304 | None:intergenic | 40.0% | |
AAGGTAAAACCCAACCTCAA+AGG | + | chr8_2:69901286-69901305 | None:intergenic | 40.0% | |
! | GACTGTTTCTCCTATTGTTG+TGG | + | chr8_2:69901357-69901376 | None:intergenic | 40.0% |
TAGACTAGCAAGTTCATCCA+CGG | - | chr8_2:69901580-69901599 | Msa1265520:intron | 40.0% | |
ATGAAAAGGAAGTCAATCCG+TGG | + | chr8_2:69901600-69901619 | None:intergenic | 40.0% | |
! | ACTGGTGGTGTCAAACTAAA+AGG | + | chr8_2:69901758-69901777 | None:intergenic | 40.0% |
AAAGGGATAGTGAAAACTGG+TGG | + | chr8_2:69901773-69901792 | None:intergenic | 40.0% | |
GATGGGTGGAATCAAACTAA+AGG | + | chr8_2:69901791-69901810 | None:intergenic | 40.0% | |
! | TTAGTTTGATTCCACCCATC+CGG | - | chr8_2:69901791-69901810 | Msa1265520:intron | 40.0% |
TTGAGTGAGTATAACCGGAT+GGG | + | chr8_2:69901808-69901827 | None:intergenic | 40.0% | |
TTTGAGTGAGTATAACCGGA+TGG | + | chr8_2:69901809-69901828 | None:intergenic | 40.0% | |
GATGAAAATCAAGTGTGCAG+GGG | + | chr8_2:69901887-69901906 | None:intergenic | 40.0% | |
CGATGAAAATCAAGTGTGCA+GGG | + | chr8_2:69901888-69901907 | None:intergenic | 40.0% | |
TCGATGAAAATCAAGTGTGC+AGG | + | chr8_2:69901889-69901908 | None:intergenic | 40.0% | |
!!! | AGGTTTTGAGCAATATGTGG+TGG | + | chr8_2:69902029-69902048 | None:intergenic | 40.0% |
!!! | GAGAGGTTTTGAGCAATATG+TGG | + | chr8_2:69902032-69902051 | None:intergenic | 40.0% |
CCCCCAAATCCCTATTAATT+TGG | - | chr8_2:69902106-69902125 | Msa1265520:intron | 40.0% | |
AAAGTTGAAGACTAGGGTGA+GGG | + | chr8_2:69902260-69902279 | None:intergenic | 40.0% | |
AAAAGTTGAAGACTAGGGTG+AGG | + | chr8_2:69902261-69902280 | None:intergenic | 40.0% | |
GCAACAGAAACACCATTACT+AGG | + | chr8_2:69902350-69902369 | None:intergenic | 40.0% | |
!! | AAGGGTTATTTCTGTTGGGA+TGG | - | chr8_2:69902970-69902989 | Msa1265520:CDS | 40.0% |
AGTATACATCATGCATGCAG+AGG | + | chr8_2:69903145-69903164 | None:intergenic | 40.0% | |
CTGCATGCATGATGTATACT+TGG | - | chr8_2:69903145-69903164 | Msa1265520:intron | 40.0% | |
AAGTTGCAGGTGGGAATCTT+TGG | - | chr8_2:69897498-69897517 | Msa1265520:intron | 45.0% | |
TCATTGCCGCTGACCATTTA+AGG | - | chr8_2:69897605-69897624 | Msa1265520:intron | 45.0% | |
CATTGCCGCTGACCATTTAA+GGG | - | chr8_2:69897606-69897625 | Msa1265520:intron | 45.0% | |
CTTGTGCATCAAAAGCTTCC+AGG | - | chr8_2:69897919-69897938 | Msa1265520:intron | 45.0% | |
GGGCTGACTATATCTGTGTT+TGG | - | chr8_2:69898307-69898326 | Msa1265520:intron | 45.0% | |
GGAAAGTTTCAGAAGCCCAA+AGG | + | chr8_2:69898660-69898679 | None:intergenic | 45.0% | |
GAATATTCTCCGGATGCCAA+GGG | + | chr8_2:69899001-69899020 | None:intergenic | 45.0% | |
!!! | TACAGAGTTTTTGGCTTGCC+TGG | - | chr8_2:69899156-69899175 | Msa1265520:intron | 45.0% |
!!! | TTTTGGCTTGCCTGGATTGT+AGG | - | chr8_2:69899164-69899183 | Msa1265520:intron | 45.0% |
TTGCCTGGATTGTAGGTTCA+TGG | - | chr8_2:69899171-69899190 | Msa1265520:intron | 45.0% | |
!! | CATCAGTTTTGTGCTAGGGA+CGG | - | chr8_2:69899214-69899233 | Msa1265520:intron | 45.0% |
TGCAAGCTCAAACATGGGTA+GGG | + | chr8_2:69899696-69899715 | None:intergenic | 45.0% | |
TTCACTCGTGAATTCCCTCT+GGG | - | chr8_2:69899827-69899846 | Msa1265520:intron | 45.0% | |
GGGTTAGACTCTAGATCACT+TGG | - | chr8_2:69899924-69899943 | Msa1265520:intron | 45.0% | |
GCCTCTTGTACACAAAAGTC+TGG | + | chr8_2:69900638-69900657 | None:intergenic | 45.0% | |
CAGTACGTTTAGGTCAGAAG+CGG | - | chr8_2:69900885-69900904 | Msa1265520:intron | 45.0% | |
AGTACGTTTAGGTCAGAAGC+GGG | - | chr8_2:69900886-69900905 | Msa1265520:intron | 45.0% | |
!!! | CTGCTCCCTTTTTTATCCCA+TGG | - | chr8_2:69900937-69900956 | Msa1265520:intron | 45.0% |
GTCGCTAACTAATCTCTGAC+AGG | - | chr8_2:69900962-69900981 | Msa1265520:intron | 45.0% | |
TATGGAGTCTCCCTTGTAGT+TGG | - | chr8_2:69901020-69901039 | Msa1265520:intron | 45.0% | |
!! | GGTAGTAAACCCTTTGAGGT+TGG | - | chr8_2:69901273-69901292 | Msa1265520:CDS | 45.0% |
!! | TGCAGGGGAGTTGATTTTGT+AGG | + | chr8_2:69901872-69901891 | None:intergenic | 45.0% |
! | CTTTGCTATGTGCGATTGCA+GGG | - | chr8_2:69902071-69902090 | Msa1265520:intron | 45.0% |
! | TTTGCTATGTGCGATTGCAG+GGG | - | chr8_2:69902072-69902091 | Msa1265520:intron | 45.0% |
AATGCATATTAGCCCCCTTC+TGG | + | chr8_2:69902151-69902170 | None:intergenic | 45.0% | |
ATACTGCCTAGTGCCTACTA+TGG | - | chr8_2:69902315-69902334 | Msa1265520:intron | 45.0% | |
TGTCCCAGACTCTAACACAT+TGG | + | chr8_2:69902475-69902494 | None:intergenic | 45.0% | |
!!! | GTATTTTTATATATAATATA+AGG | + | chr8_2:69901187-69901206 | None:intergenic | 5.0% |
! | TCTGTGCCATTGCAAGTTGC+AGG | - | chr8_2:69897485-69897504 | Msa1265520:intron | 50.0% |
TGCCATTGCAAGTTGCAGGT+GGG | - | chr8_2:69897489-69897508 | Msa1265520:intron | 50.0% | |
TTCCCACCTGCAACTTGCAA+TGG | + | chr8_2:69897494-69897513 | None:intergenic | 50.0% | |
TTGCAGGTGGGAATCTTTGG+CGG | - | chr8_2:69897501-69897520 | Msa1265520:intron | 50.0% | |
CATTATTGCGAAGGGGCAGA+AGG | - | chr8_2:69897999-69898018 | Msa1265520:intron | 50.0% | |
! | CAGATTTTCCAGGCCACACA+CGG | - | chr8_2:69898157-69898176 | Msa1265520:intron | 50.0% |
ACTGTGCCAATAACCGTGTG+TGG | + | chr8_2:69898173-69898192 | None:intergenic | 50.0% | |
TGAAGTTAGGGGCAAGCCAA+GGG | + | chr8_2:69898472-69898491 | None:intergenic | 50.0% | |
ATGAAGTTAGGGGCAAGCCA+AGG | + | chr8_2:69898473-69898492 | None:intergenic | 50.0% | |
CCATATCTTCCCTTGGCATC+CGG | - | chr8_2:69898989-69899008 | Msa1265520:intron | 50.0% | |
GGAATATTCTCCGGATGCCA+AGG | + | chr8_2:69899002-69899021 | None:intergenic | 50.0% | |
TGGCCATGAACCTACAATCC+AGG | + | chr8_2:69899177-69899196 | None:intergenic | 50.0% | |
CTGCAAGCTCAAACATGGGT+AGG | + | chr8_2:69899697-69899716 | None:intergenic | 50.0% | |
CTACCCATGTTTGAGCTTGC+AGG | - | chr8_2:69899695-69899714 | Msa1265520:intron | 50.0% | |
CTGCCTGCAAGCTCAAACAT+GGG | + | chr8_2:69899701-69899720 | None:intergenic | 50.0% | |
TCTGCCTGCAAGCTCAAACA+TGG | + | chr8_2:69899702-69899721 | None:intergenic | 50.0% | |
CAGAGGGAATTCACGAGTGA+AGG | + | chr8_2:69899828-69899847 | None:intergenic | 50.0% | |
CTTCACTCGTGAATTCCCTC+TGG | - | chr8_2:69899826-69899845 | Msa1265520:intron | 50.0% | |
! | TTTTATCAGAAGGGGCGGCA+AGG | - | chr8_2:69899903-69899922 | Msa1265520:intron | 50.0% |
TTTATCAGAAGGGGCGGCAA+GGG | - | chr8_2:69899904-69899923 | Msa1265520:intron | 50.0% | |
TGATCAGGTGGAGACAAGCA+CGG | - | chr8_2:69899998-69900017 | Msa1265520:intron | 50.0% | |
AGTGAGTATAACCGGATGGG+TGG | + | chr8_2:69901805-69901824 | None:intergenic | 50.0% | |
! | GCTTTGCTATGTGCGATTGC+AGG | - | chr8_2:69902070-69902089 | Msa1265520:intron | 50.0% |
! | GTGCCATTGCAAGTTGCAGG+TGG | - | chr8_2:69897488-69897507 | Msa1265520:intron | 55.0% |
TCCAGGCCACACACGGTTAT+TGG | - | chr8_2:69898164-69898183 | Msa1265520:intron | 55.0% | |
!! | TTCGGTGTCTCTCCTTGCAG+TGG | - | chr8_2:69898348-69898367 | Msa1265520:intron | 55.0% |
CCGGATGCCAAGGGAAGATA+TGG | + | chr8_2:69898992-69899011 | None:intergenic | 55.0% | |
TTCAGGTGCCCCTGTTGAGA+TGG | - | chr8_2:69900128-69900147 | Msa1265520:CDS | 55.0% | |
AGCAGCAGATGTCCTCCAGA+AGG | - | chr8_2:69902133-69902152 | Msa1265520:CDS | 55.0% | |
GCAGCAGATGTCCTCCAGAA+GGG | - | chr8_2:69902134-69902153 | Msa1265520:CDS | 55.0% | |
CAGCAGATGTCCTCCAGAAG+GGG | - | chr8_2:69902135-69902154 | Msa1265520:CDS | 55.0% | |
AGCAGATGTCCTCCAGAAGG+GGG | - | chr8_2:69902136-69902155 | Msa1265520:CDS | 55.0% | |
GCATATTAGCCCCCTTCTGG+AGG | + | chr8_2:69902148-69902167 | None:intergenic | 55.0% | |
GTTGAAGACTAGGGTGAGGG+TGG | + | chr8_2:69902257-69902276 | None:intergenic | 55.0% | |
GCCAATAACCGTGTGTGGCC+TGG | + | chr8_2:69898168-69898187 | None:intergenic | 60.0% | |
GGGCAAGCCAAGGGAGCAAT+AGG | + | chr8_2:69898463-69898482 | None:intergenic | 60.0% | |
GGCTGTGCTACAAGCCCAGA+GGG | + | chr8_2:69899844-69899863 | None:intergenic | 60.0% | |
TGGCTGTGCTACAAGCCCAG+AGG | + | chr8_2:69899845-69899864 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 69897018 | 69903288 | 69897018 | ID=Msa1265520;Name=Msa1265520 |
chr8_2 | mRNA | 69897018 | 69903288 | 69897018 | ID=Msa1265520-mRNA-1;Parent=Msa1265520;Name=Msa1265520-mRNA-1;_AED=0.20;_eAED=0.20;_QI=17|0.84|0.85|1|0.92|0.92|14|425|400 |
chr8_2 | exon | 69897018 | 69897484 | 69897018 | ID=Msa1265520-mRNA-1:exon:23187;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69897718 | 69897822 | 69897718 | ID=Msa1265520-mRNA-1:exon:23186;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69899227 | 69899322 | 69899227 | ID=Msa1265520-mRNA-1:exon:23185;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69899399 | 69899470 | 69899399 | ID=Msa1265520-mRNA-1:exon:23184;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69899572 | 69899667 | 69899572 | ID=Msa1265520-mRNA-1:exon:23183;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69900072 | 69900173 | 69900072 | ID=Msa1265520-mRNA-1:exon:23182;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69901056 | 69901145 | 69901056 | ID=Msa1265520-mRNA-1:exon:23181;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69901243 | 69901326 | 69901243 | ID=Msa1265520-mRNA-1:exon:23180;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69901707 | 69901781 | 69901707 | ID=Msa1265520-mRNA-1:exon:23179;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69901889 | 69901972 | 69901889 | ID=Msa1265520-mRNA-1:exon:23178;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69902116 | 69902319 | 69902116 | ID=Msa1265520-mRNA-1:exon:23177;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69902746 | 69902799 | 69902746 | ID=Msa1265520-mRNA-1:exon:23176;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69902930 | 69902995 | 69902930 | ID=Msa1265520-mRNA-1:exon:23175;Parent=Msa1265520-mRNA-1 |
chr8_2 | exon | 69903239 | 69903288 | 69903239 | ID=Msa1265520-mRNA-1:exon:23174;Parent=Msa1265520-mRNA-1 |
chr8_2 | five_prime_UTR | 69903272 | 69903288 | 69903272 | ID=Msa1265520-mRNA-1:five_prime_utr;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69903239 | 69903271 | 69903239 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69902930 | 69902995 | 69902930 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69902746 | 69902799 | 69902746 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69902116 | 69902319 | 69902116 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69901889 | 69901972 | 69901889 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69901707 | 69901781 | 69901707 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69901243 | 69901326 | 69901243 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69901056 | 69901145 | 69901056 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69900072 | 69900173 | 69900072 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69899572 | 69899667 | 69899572 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69899399 | 69899470 | 69899399 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69899227 | 69899322 | 69899227 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69897718 | 69897822 | 69897718 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | CDS | 69897443 | 69897484 | 69897443 | ID=Msa1265520-mRNA-1:cds;Parent=Msa1265520-mRNA-1 |
chr8_2 | three_prime_UTR | 69897018 | 69897442 | 69897018 | ID=Msa1265520-mRNA-1:three_prime_utr;Parent=Msa1265520-mRNA-1 |
Gene Sequence |
Protein sequence |