Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969380 | XP_013450732.1 | 94.798 | 346 | 17 | 1 | 3 | 348 | 16 | 360 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969380 | sp|Q93ZC9|GLAK1_ARATH | 71.387 | 346 | 98 | 1 | 4 | 349 | 17 | 361 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969380 | I3SE96 | 94.798 | 346 | 17 | 1 | 3 | 348 | 16 | 360 | 0.0 | 677 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0969380 | -0.808847 | 2.532428e-50 | -8.615850e-47 |
| Msa0017300 | Msa0969380 | -0.813272 | 2.783802e-51 | -8.615850e-47 |
| Msa0026780 | Msa0969380 | 0.839392 | 1.628922e-57 | -8.615850e-47 |
| Msa0029520 | Msa0969380 | -0.808913 | 2.451260e-50 | -8.615850e-47 |
| Msa0033840 | Msa0969380 | -0.826976 | 2.018413e-54 | -8.615850e-47 |
| Msa0037180 | Msa0969380 | 0.844186 | 8.837158e-59 | -8.615850e-47 |
| Msa0037280 | Msa0969380 | 0.804200 | 2.420969e-49 | -8.615850e-47 |
| Msa0052780 | Msa0969380 | 0.863221 | 2.905086e-64 | -8.615850e-47 |
| Msa0053640 | Msa0969380 | 0.813158 | 2.948396e-51 | -8.615850e-47 |
| Msa0059080 | Msa0969380 | 0.818925 | 1.519707e-52 | -8.615850e-47 |
| Msa0067590 | Msa0969380 | -0.855551 | 5.848144e-62 | -8.615850e-47 |
| Msa0075990 | Msa0969380 | -0.833456 | 5.278239e-56 | -8.615850e-47 |
| Msa0077370 | Msa0969380 | 0.814371 | 1.593684e-51 | -8.615850e-47 |
| Msa0081610 | Msa0969380 | -0.846425 | 2.189973e-59 | -8.615850e-47 |
| Msa0085450 | Msa0969380 | 0.808223 | 3.441688e-50 | -8.615850e-47 |
| Msa0091730 | Msa0969380 | 0.826229 | 3.042303e-54 | -8.615850e-47 |
| Msa0092220 | Msa0969380 | 0.832579 | 8.720957e-56 | -8.615850e-47 |
| Msa0095810 | Msa0969380 | -0.803612 | 3.208430e-49 | -8.615850e-47 |
| Msa0097570 | Msa0969380 | 0.866469 | 2.786699e-65 | -8.615850e-47 |
| Msa0111110 | Msa0969380 | -0.800272 | 1.558134e-48 | -8.615850e-47 |
| Msa0112880 | Msa0969380 | -0.803276 | 3.765902e-49 | -8.615850e-47 |
| Msa0603310 | Msa0969380 | 0.800614 | 1.327220e-48 | -8.615850e-47 |
| Msa0611060 | Msa0969380 | 0.834965 | 2.209197e-56 | -8.615850e-47 |
| Msa0621670 | Msa0969380 | -0.808028 | 3.786540e-50 | -8.615850e-47 |
| Msa0626920 | Msa0969380 | 0.876518 | 1.310147e-68 | -8.615850e-47 |
| Msa0632420 | Msa0969380 | 0.806363 | 8.532855e-50 | -8.615850e-47 |
| Msa0639110 | Msa0969380 | 0.824794 | 6.654053e-54 | -8.615850e-47 |
| Msa0651870 | Msa0969380 | 0.849296 | 3.541051e-60 | -8.615850e-47 |
| Msa0651890 | Msa0969380 | 0.846235 | 2.466675e-59 | -8.615850e-47 |
| Msa0657710 | Msa0969380 | 0.811935 | 5.457498e-51 | -8.615850e-47 |
| Msa0671170 | Msa0969380 | 0.810865 | 9.320316e-51 | -8.615850e-47 |
| Msa0671210 | Msa0969380 | 0.817077 | 3.975778e-52 | -8.615850e-47 |
| Msa0682160 | Msa0969380 | 0.807650 | 4.557664e-50 | -8.615850e-47 |
| Msa0693340 | Msa0969380 | -0.806784 | 6.951173e-50 | -8.615850e-47 |
| Msa0694140 | Msa0969380 | 0.827392 | 1.605005e-54 | -8.615850e-47 |
| Msa0697680 | Msa0969380 | 0.804669 | 1.933611e-49 | -8.615850e-47 |
| Msa0699800 | Msa0969380 | 0.803886 | 2.814105e-49 | -8.615850e-47 |
| Msa0701800 | Msa0969380 | -0.812826 | 3.486833e-51 | -8.615850e-47 |
| Msa0702800 | Msa0969380 | 0.818383 | 2.017166e-52 | -8.615850e-47 |
| Msa0742370 | Msa0969380 | -0.829198 | 5.886305e-55 | -8.615850e-47 |
| Msa0744640 | Msa0969380 | 0.823362 | 1.443306e-53 | -8.615850e-47 |
| Msa0753270 | Msa0969380 | 0.801813 | 7.544086e-49 | -8.615850e-47 |
| Msa0772490 | Msa0969380 | 0.838910 | 2.171164e-57 | -8.615850e-47 |
| Msa0779450 | Msa0969380 | -0.823716 | 1.192176e-53 | -8.615850e-47 |
| Msa0798450 | Msa0969380 | 0.802528 | 5.376065e-49 | -8.615850e-47 |
| Msa0828960 | Msa0969380 | 0.818624 | 1.778818e-52 | -8.615850e-47 |
| Msa0832160 | Msa0969380 | -0.811237 | 7.741231e-51 | -8.615850e-47 |
| Msa0832520 | Msa0969380 | 0.816695 | 4.843360e-52 | -8.615850e-47 |
| Msa0832760 | Msa0969380 | 0.801083 | 1.064425e-48 | -8.615850e-47 |
| Msa0841730 | Msa0969380 | 0.824135 | 9.507452e-54 | -8.615850e-47 |
| Msa0122530 | Msa0969380 | 0.825154 | 5.470593e-54 | -8.615850e-47 |
| Msa0127220 | Msa0969380 | -0.801283 | 9.684634e-49 | -8.615850e-47 |
| Msa0127350 | Msa0969380 | -0.806880 | 6.636753e-50 | -8.615850e-47 |
| Msa0138990 | Msa0969380 | -0.808528 | 2.962361e-50 | -8.615850e-47 |
| Msa0143630 | Msa0969380 | 0.808591 | 2.872033e-50 | -8.615850e-47 |
| Msa0145430 | Msa0969380 | 0.857427 | 1.644342e-62 | -8.615850e-47 |
| Msa0150330 | Msa0969380 | 0.824130 | 9.534522e-54 | -8.615850e-47 |
| Msa0168770 | Msa0969380 | -0.836687 | 8.088462e-57 | -8.615850e-47 |
| Msa0173950 | Msa0969380 | -0.857415 | 1.657602e-62 | -8.615850e-47 |
| Msa0177320 | Msa0969380 | 0.850694 | 1.438765e-60 | -8.615850e-47 |
| Msa0178000 | Msa0969380 | 0.822755 | 1.998951e-53 | -8.615850e-47 |
| Msa0194920 | Msa0969380 | 0.809829 | 1.559226e-50 | -8.615850e-47 |
| Msa0197170 | Msa0969380 | 0.801453 | 8.940719e-49 | -8.615850e-47 |
| Msa0199350 | Msa0969380 | 0.810190 | 1.303888e-50 | -8.615850e-47 |
| Msa0216150 | Msa0969380 | -0.813112 | 3.018230e-51 | -8.615850e-47 |
| Msa0216340 | Msa0969380 | 0.810385 | 1.183705e-50 | -8.615850e-47 |
| Msa0219280 | Msa0969380 | 0.815167 | 1.061941e-51 | -8.615850e-47 |
| Msa0220990 | Msa0969380 | 0.831365 | 1.739393e-55 | -8.615850e-47 |
| Msa0224110 | Msa0969380 | 0.800095 | 1.692310e-48 | -8.615850e-47 |
| Msa0226260 | Msa0969380 | 0.811915 | 5.513618e-51 | -8.615850e-47 |
| Msa0233920 | Msa0969380 | 0.844800 | 6.038513e-59 | -8.615850e-47 |
| Msa0236920 | Msa0969380 | 0.824179 | 9.287719e-54 | -8.615850e-47 |
| Msa0384590 | Msa0969380 | 0.801645 | 8.166373e-49 | -8.615850e-47 |
| Msa0389080 | Msa0969380 | -0.828246 | 9.999272e-55 | -8.615850e-47 |
| Msa0399810 | Msa0969380 | 0.808314 | 3.292181e-50 | -8.615850e-47 |
| Msa0399820 | Msa0969380 | 0.813787 | 2.144912e-51 | -8.615850e-47 |
| Msa0403740 | Msa0969380 | -0.802447 | 5.586804e-49 | -8.615850e-47 |
| Msa0405470 | Msa0969380 | -0.801056 | 1.077764e-48 | -8.615850e-47 |
| Msa0417790 | Msa0969380 | -0.807461 | 4.997819e-50 | -8.615850e-47 |
| Msa0456450 | Msa0969380 | -0.801197 | 1.008546e-48 | -8.615850e-47 |
| Msa0458220 | Msa0969380 | 0.834012 | 3.832278e-56 | -8.615850e-47 |
| Msa0478430 | Msa0969380 | 0.812304 | 4.534591e-51 | -8.615850e-47 |
| Msa0481310 | Msa0969380 | 0.843552 | 1.306264e-58 | -8.615850e-47 |
| Msa0239560 | Msa0969380 | 0.800525 | 1.383493e-48 | -8.615850e-47 |
| Msa0241750 | Msa0969380 | 0.821054 | 4.950838e-53 | -8.615850e-47 |
| Msa0254470 | Msa0969380 | 0.814987 | 1.164084e-51 | -8.615850e-47 |
| Msa0256540 | Msa0969380 | 0.808751 | 2.655051e-50 | -8.615850e-47 |
| Msa0274720 | Msa0969380 | 0.800008 | 1.762576e-48 | -8.615850e-47 |
| Msa0281050 | Msa0969380 | 0.800149 | 1.650220e-48 | -8.615850e-47 |
| Msa0285420 | Msa0969380 | 0.803148 | 4.002551e-49 | -8.615850e-47 |
| Msa0293720 | Msa0969380 | 0.807918 | 3.997864e-50 | -8.615850e-47 |
| Msa0294200 | Msa0969380 | 0.816339 | 5.819347e-52 | -8.615850e-47 |
| Msa0298400 | Msa0969380 | 0.817258 | 3.619259e-52 | -8.615850e-47 |
| Msa0300280 | Msa0969380 | 0.802338 | 5.883563e-49 | -8.615850e-47 |
| Msa0304730 | Msa0969380 | 0.811538 | 6.659258e-51 | -8.615850e-47 |
| Msa0312640 | Msa0969380 | 0.855074 | 8.052248e-62 | -8.615850e-47 |
| Msa0316740 | Msa0969380 | 0.804761 | 1.849829e-49 | -8.615850e-47 |
| Msa0320230 | Msa0969380 | 0.828516 | 8.608811e-55 | -8.615850e-47 |
| Msa0326170 | Msa0969380 | -0.808628 | 2.820896e-50 | -8.615850e-47 |
| Msa0331580 | Msa0969380 | 0.809526 | 1.811615e-50 | -8.615850e-47 |
| Msa0332760 | Msa0969380 | 0.813161 | 2.943705e-51 | -8.615850e-47 |
| Msa0334320 | Msa0969380 | 0.822137 | 2.782645e-53 | -8.615850e-47 |
| Msa0334450 | Msa0969380 | -0.832322 | 1.009818e-55 | -8.615850e-47 |
| Msa0345050 | Msa0969380 | 0.809581 | 1.763014e-50 | -8.615850e-47 |
| Msa0364030 | Msa0969380 | -0.802457 | 5.560129e-49 | -8.615850e-47 |
| Msa0504700 | Msa0969380 | 0.833728 | 4.514370e-56 | -8.615850e-47 |
| Msa0522540 | Msa0969380 | 0.800896 | 1.162498e-48 | -8.615850e-47 |
| Msa0523420 | Msa0969380 | -0.810139 | 1.337160e-50 | -8.615850e-47 |
| Msa0526500 | Msa0969380 | -0.820408 | 6.969632e-53 | -8.615850e-47 |
| Msa0526520 | Msa0969380 | -0.801376 | 9.272164e-49 | -8.615850e-47 |
| Msa0528930 | Msa0969380 | 0.837896 | 3.965506e-57 | -8.615850e-47 |
| Msa0529000 | Msa0969380 | 0.812190 | 4.803404e-51 | -8.615850e-47 |
| Msa0536350 | Msa0969380 | 0.814228 | 1.714568e-51 | -8.615850e-47 |
| Msa0548420 | Msa0969380 | 0.808953 | 2.403339e-50 | -8.615850e-47 |
| Msa0559450 | Msa0969380 | -0.805405 | 1.356312e-49 | -8.615850e-47 |
| Msa0559690 | Msa0969380 | -0.809327 | 1.998414e-50 | -8.615850e-47 |
| Msa0560460 | Msa0969380 | 0.822450 | 2.353186e-53 | -8.615850e-47 |
| Msa0563440 | Msa0969380 | 0.863778 | 1.952090e-64 | -8.615850e-47 |
| Msa0572730 | Msa0969380 | -0.803604 | 3.220035e-49 | -8.615850e-47 |
| Msa0576020 | Msa0969380 | -0.805285 | 1.437367e-49 | -8.615850e-47 |
| Msa0578460 | Msa0969380 | 0.805131 | 1.547909e-49 | -8.615850e-47 |
| Msa0580850 | Msa0969380 | 0.802045 | 6.757613e-49 | -8.615850e-47 |
| Msa0581350 | Msa0969380 | 0.835118 | 2.021136e-56 | -8.615850e-47 |
| Msa0588110 | Msa0969380 | -0.815686 | 8.142362e-52 | -8.615850e-47 |
| Msa0590620 | Msa0969380 | -0.818946 | 1.502768e-52 | -8.615850e-47 |
| Msa0592330 | Msa0969380 | 0.804735 | 1.872786e-49 | -8.615850e-47 |
| Msa0862480 | Msa0969380 | -0.818254 | 2.157297e-52 | -8.615850e-47 |
| Msa0873910 | Msa0969380 | 0.851532 | 8.347244e-61 | -8.615850e-47 |
| Msa0878860 | Msa0969380 | 0.807317 | 5.363156e-50 | -8.615850e-47 |
| Msa0906660 | Msa0969380 | 0.812610 | 3.888610e-51 | -8.615850e-47 |
| Msa0925030 | Msa0969380 | -0.800036 | 1.739566e-48 | -8.615850e-47 |
| Msa0931550 | Msa0969380 | -0.800955 | 1.130443e-48 | -8.615850e-47 |
| Msa0940910 | Msa0969380 | 0.816803 | 4.580665e-52 | -8.615850e-47 |
| Msa0946110 | Msa0969380 | 0.814450 | 1.531567e-51 | -8.615850e-47 |
| Msa0969380 | Msa0969590 | 0.965376 | 1.592584e-124 | -8.615850e-47 |
| Msa0969380 | Msa0969720 | 0.992530 | 7.539072e-194 | -8.615850e-47 |
| Msa0969380 | Msa0975960 | 0.852057 | 5.925640e-61 | -8.615850e-47 |
| Msa0969380 | Msa0982190 | 0.811705 | 6.125177e-51 | -8.615850e-47 |
| Msa0969380 | Msa1014550 | -0.800335 | 1.512807e-48 | -8.615850e-47 |
| Msa0969380 | Msa1039440 | -0.809895 | 1.508965e-50 | -8.615850e-47 |
| Msa0969380 | Msa1080130 | 0.808384 | 3.180013e-50 | -8.615850e-47 |
| Msa0969380 | Msa1087890 | 0.846171 | 2.568069e-59 | -8.615850e-47 |
| Msa0969380 | Msa1094810 | 0.803555 | 3.296421e-49 | -8.615850e-47 |
| Msa0969380 | Msa1121720 | -0.822819 | 1.931741e-53 | -8.615850e-47 |
| Msa0969380 | Msa1129120 | -0.808897 | 2.471074e-50 | -8.615850e-47 |
| Msa0969380 | Msa1156120 | -0.805527 | 1.278608e-49 | -8.615850e-47 |
| Msa0969380 | Msa1158600 | -0.803249 | 3.814839e-49 | -8.615850e-47 |
| Msa0969380 | Msa1167310 | 0.817964 | 2.509465e-52 | -8.615850e-47 |
| Msa0969380 | Msa1173150 | 0.863910 | 1.776678e-64 | -8.615850e-47 |
| Msa0969380 | Msa1180300 | 0.801434 | 9.021850e-49 | -8.615850e-47 |
| Msa0969380 | Msa1184230 | 0.810814 | 9.558089e-51 | -8.615850e-47 |
| Msa0969380 | Msa1193910 | 0.825731 | 3.995532e-54 | -8.615850e-47 |
| Msa0969380 | Msa1202470 | 0.837302 | 5.632158e-57 | -8.615850e-47 |
| Msa0969380 | Msa1205270 | -0.805465 | 1.317695e-49 | -8.615850e-47 |
| Msa0969380 | Msa1207920 | -0.840623 | 7.777144e-58 | -8.615850e-47 |
| Msa0969380 | Msa1221270 | 0.830854 | 2.322267e-55 | -8.615850e-47 |
| Msa0969380 | Msa1221630 | 0.821621 | 3.662813e-53 | -8.615850e-47 |
| Msa0969380 | Msa1221960 | 0.878769 | 2.148176e-69 | -8.615850e-47 |
| Msa0969380 | Msa1249600 | 0.852075 | 5.854370e-61 | -8.615850e-47 |
| Msa0969380 | Msa1254910 | 0.844577 | 6.936935e-59 | -8.615850e-47 |
| Msa0969380 | Msa1265020 | 0.884863 | 1.332847e-71 | -8.615850e-47 |
| Msa0969380 | Msa1265520 | -0.804731 | 1.876514e-49 | -8.615850e-47 |
| Msa0969380 | Msa1273620 | -0.826155 | 3.167493e-54 | -8.615850e-47 |
| Msa0969380 | Msa1284020 | 0.825754 | 3.945784e-54 | -8.615850e-47 |
| Msa0969380 | Msa1290900 | 0.831978 | 1.228705e-55 | -8.615850e-47 |
| Msa0969380 | Msa1300100 | 0.816819 | 4.542077e-52 | -8.615850e-47 |
| Msa0969380 | Msa1311600 | -0.806379 | 8.465036e-50 | -8.615850e-47 |
| Msa0969380 | Msa1312770 | 0.816494 | 5.373242e-52 | -8.615850e-47 |
| Msa0969380 | Msa1323070 | 0.825889 | 3.664345e-54 | -8.615850e-47 |
| Msa0969380 | Msa1326180 | 0.830380 | 3.033603e-55 | -8.615850e-47 |
| Msa0969380 | Msa1326780 | -0.823134 | 1.631313e-53 | -8.615850e-47 |
| Msa0969380 | Msa1329730 | 0.806711 | 7.202668e-50 | -8.615850e-47 |
| Msa0969380 | Msa1331570 | -0.832188 | 1.090045e-55 | -8.615850e-47 |
| Msa0969380 | Msa1337850 | 0.880005 | 7.837669e-70 | -8.615850e-47 |
| Msa0969380 | Msa1342360 | -0.801918 | 7.176390e-49 | -8.615850e-47 |
| Msa0969380 | Msa1352600 | -0.809527 | 1.810316e-50 | -8.615850e-47 |
| Msa0969380 | Msa1356100 | -0.821501 | 3.904210e-53 | -8.615850e-47 |
| Msa0969380 | Msa1357990 | 0.815108 | 1.094735e-51 | -8.615850e-47 |
| Msa0969380 | Msa1363280 | -0.835107 | 2.033519e-56 | -8.615850e-47 |
| Msa0969380 | Msa1363310 | -0.803413 | 3.527184e-49 | -8.615850e-47 |
| Msa0969380 | Msa1377980 | -0.802571 | 5.267852e-49 | -8.615850e-47 |
| Msa0969380 | Msa1380180 | -0.806260 | 8.967640e-50 | -8.615850e-47 |
| Msa0969380 | Msa1383630 | 0.815626 | 8.394405e-52 | -8.615850e-47 |
| Msa0969380 | Msa1385970 | 0.841941 | 3.501079e-58 | -8.615850e-47 |
| Msa0969380 | Msa1386580 | -0.802732 | 4.877957e-49 | -8.615850e-47 |
| Msa0969380 | Msa1388720 | -0.807542 | 4.803475e-50 | -8.615850e-47 |
| Msa0969380 | Msa1408280 | -0.802324 | 5.922592e-49 | -8.615850e-47 |
| Msa0969380 | Msa1411370 | 0.827137 | 1.847214e-54 | -8.615850e-47 |
| Msa0969380 | Msa1413150 | 0.817557 | 3.099539e-52 | -8.615850e-47 |
| Msa0969380 | Msa1414780 | -0.831915 | 1.273057e-55 | -8.615850e-47 |
| Msa0969380 | Msa1417110 | 0.841559 | 4.415039e-58 | -8.615850e-47 |
| Msa0969380 | Msa1422860 | 0.817335 | 3.477854e-52 | -8.615850e-47 |
| Msa0969380 | Msa1429470 | 0.817823 | 2.699739e-52 | -8.615850e-47 |
| Msa0969380 | Msa1439250 | 0.808263 | 3.374391e-50 | -8.615850e-47 |
| Msa0969380 | Msa1439270 | 0.803010 | 4.273838e-49 | -8.615850e-47 |
| Msa0969380 | Msa1439860 | 0.826177 | 3.130800e-54 | -8.615850e-47 |
| Msa0969380 | Msa1453430 | 0.856874 | 2.395308e-62 | -8.615850e-47 |
| Msa0969380 | Msa1459130 | -0.813833 | 2.095722e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969380 | MtrunA17_Chr6g0449231 | 94.798 | 346 | 17 | 1 | 3 | 348 | 16 | 360 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969380 | AT3G01640.2 | 71.387 | 346 | 98 | 1 | 4 | 349 | 33 | 377 | 0.0 | 528 |
| Msa0969380 | AT3G01640.1 | 71.387 | 346 | 98 | 1 | 4 | 349 | 17 | 361 | 0.0 | 526 |
| Msa0969380 | AT5G14470.1 | 69.253 | 348 | 105 | 2 | 3 | 349 | 16 | 362 | 2.10e-180 | 504 |
Find 111 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTTCAATGTTTCAAAAT+TGG | 0.111579 | 6_4:+905829 | Msa0969380:three_prime_UTR |
| TGATAATGGTACTATAATTT+TGG | 0.120067 | 6_4:-905902 | None:intergenic |
| GAAAATTCCAACTCAATTAA+TGG | 0.200200 | 6_4:-905686 | None:intergenic |
| CGGTATGAGGTGAGTTATTT+TGG | 0.205195 | 6_4:+901559 | Msa0969380:five_prime_UTR |
| GATCGGGTGGCGCAAGTTTA+TGG | 0.220839 | 6_4:+903548 | Msa0969380:CDS |
| ATCTTCAATGTTTCAAAATT+GGG | 0.226774 | 6_4:+905830 | Msa0969380:three_prime_UTR |
| ATCATAGGAGAGAGTGAAAT+TGG | 0.247472 | 6_4:-902294 | None:intergenic |
| GCAGCGAATCCTAGTGATTC+TGG | 0.253457 | 6_4:+903770 | Msa0969380:CDS |
| GTGTTTCAGAGTGGACTTTC+GGG | 0.255531 | 6_4:+903389 | Msa0969380:intron |
| GACTAGTACATTACATCTTC+AGG | 0.269562 | 6_4:-905620 | None:intergenic |
| CTTAACGGTTGCAAAGAAAT+TGG | 0.270327 | 6_4:-901854 | None:intergenic |
| ATAAATGCTGAAGGTTATTA+TGG | 0.304600 | 6_4:+902191 | Msa0969380:CDS |
| TATGCAAGAGTTGGATTGTT+AGG | 0.308744 | 6_4:+901784 | Msa0969380:CDS |
| AAAATTCCAACTCAATTAAT+GGG | 0.326678 | 6_4:-905685 | None:intergenic |
| TGGGATGGATGTGCTTCTTC+TGG | 0.327466 | 6_4:-905666 | None:intergenic |
| ACCTTCGCAGGTCAAAATTT+CGG | 0.328226 | 6_4:-904344 | None:intergenic |
| TCCGTTTCATTTAAACGATA+AGG | 0.331050 | 6_4:-905587 | None:intergenic |
| TGGAGGAGTTCGATTGCTTA+TGG | 0.341365 | 6_4:+902211 | Msa0969380:CDS |
| TGGAAATCAAATTGGGTACT+TGG | 0.346692 | 6_4:-905882 | None:intergenic |
| TTCTTGATTTCTACAAAGTT+AGG | 0.363177 | 6_4:+903447 | Msa0969380:CDS |
| GTTCATGAGAGATGCAAGTT+TGG | 0.363925 | 6_4:-904322 | None:intergenic |
| TGTGTTTCAGAGTGGACTTT+CGG | 0.376289 | 6_4:+903388 | Msa0969380:intron |
| CTTTCTCTGCTGCAAGGATA+AGG | 0.382614 | 6_4:-903499 | None:intergenic |
| ACGAGGGATGTTAGTATCAT+AGG | 0.390246 | 6_4:-902309 | None:intergenic |
| AAAGAACTGGGAATAGTTGC+AGG | 0.395186 | 6_4:+903518 | Msa0969380:CDS |
| TCCTTATCGTTTAAATGAAA+CGG | 0.408438 | 6_4:+905586 | Msa0969380:CDS |
| AATCCAAGCGATGTTTATTA+CGG | 0.415951 | 6_4:+901808 | Msa0969380:CDS |
| ATCCATCCCATTAATTGAGT+TGG | 0.439867 | 6_4:+905679 | Msa0969380:three_prime_UTR |
| ATATTGTACAGGTCAATGTT+TGG | 0.439879 | 6_4:+905377 | Msa0969380:intron |
| GTTATGTTATGCAGGTTGAT+AGG | 0.454420 | 6_4:+902168 | Msa0969380:intron |
| CTTCTCTTCTCATCATCAAC+TGG | 0.454470 | 6_4:+901933 | Msa0969380:CDS |
| GTACGGCAGAGGTGGCTTGA+TGG | 0.458445 | 6_4:+904216 | Msa0969380:CDS |
| GAAATCAAGAAAGCAGTTCA+AGG | 0.463436 | 6_4:-903435 | None:intergenic |
| GAGAAAGAGAAAGAGAAAAG+AGG | 0.470273 | 6_4:+901694 | Msa0969380:five_prime_UTR |
| ACTAGTACATTACATCTTCA+GGG | 0.471589 | 6_4:-905619 | None:intergenic |
| CCTTGCAGCAGAGAAAGAAC+TGG | 0.472846 | 6_4:+903505 | Msa0969380:CDS |
| TCGTGACTTGTCAGCAGGGG+TGG | 0.475395 | 6_4:-901530 | None:intergenic |
| CAGCGAATCCTAGTGATTCT+GGG | 0.475772 | 6_4:+903771 | Msa0969380:CDS |
| ATTGGAAGGAACGAGCTTAA+CGG | 0.479671 | 6_4:-901869 | None:intergenic |
| ACTCATCGTGACTTGTCAGC+AGG | 0.479780 | 6_4:-901535 | None:intergenic |
| TGATACTAACATCCCTCGTC+AGG | 0.483235 | 6_4:+902313 | Msa0969380:CDS |
| AATGGTAGAGGTTGCTAGGA+AGG | 0.485870 | 6_4:+905430 | Msa0969380:CDS |
| TCATTTAAACGATAAGGAAA+AGG | 0.488851 | 6_4:-905581 | None:intergenic |
| TTGCCGTAATAAACATCGCT+TGG | 0.491017 | 6_4:-901811 | None:intergenic |
| GGAAATCAAATTGGGTACTT+GGG | 0.491916 | 6_4:-905881 | None:intergenic |
| GGAGCCGCATCAAAATTTAC+AGG | 0.492323 | 6_4:+905455 | Msa0969380:CDS |
| CACAAAGCATATGCAAGAGT+TGG | 0.502332 | 6_4:+901775 | Msa0969380:CDS |
| TCTTCAATGTTTCAAAATTG+GGG | 0.502571 | 6_4:+905831 | Msa0969380:three_prime_UTR |
| AGTGGACTTTCGGGTTCTAG+TGG | 0.508326 | 6_4:+903398 | Msa0969380:CDS |
| CAAAGTTAGGCATCTAATCA+AGG | 0.511075 | 6_4:+903460 | Msa0969380:CDS |
| TTCCAACTCAATTAATGGGA+TGG | 0.514507 | 6_4:-905681 | None:intergenic |
| AGTTGCAGGTCTTCAAGATC+GGG | 0.515184 | 6_4:+903532 | Msa0969380:CDS |
| GTGGACGGCTAAATTGATAA+TGG | 0.520649 | 6_4:-905916 | None:intergenic |
| ATCTAATCAAGGTGGAGGTT+AGG | 0.525850 | 6_4:+903471 | Msa0969380:CDS |
| GTAGAGGTTGCTAGGAAGGT+TGG | 0.526618 | 6_4:+905434 | Msa0969380:CDS |
| TAGTTGCAGGTCTTCAAGAT+CGG | 0.535657 | 6_4:+903531 | Msa0969380:CDS |
| AAGGAAAACATGGATAAACT+AGG | 0.536324 | 6_4:+903689 | Msa0969380:CDS |
| GCATCAAAATTTACAGGTAG+CGG | 0.536936 | 6_4:+905461 | Msa0969380:CDS |
| TAGGATTCGCTGCATAGATA+AGG | 0.537333 | 6_4:-903760 | None:intergenic |
| CTCATCGTGACTTGTCAGCA+GGG | 0.544692 | 6_4:-901534 | None:intergenic |
| TTATATTTGTATCGTGCACA+TGG | 0.544887 | 6_4:+905801 | Msa0969380:three_prime_UTR |
| CGTGACTTGTCAGCAGGGGT+GGG | 0.549287 | 6_4:-901529 | None:intergenic |
| TTTGCTTGAGAAGTCCCCTC+AGG | 0.550365 | 6_4:-905506 | None:intergenic |
| CCAGTTCTTTCTCTGCTGCA+AGG | 0.550986 | 6_4:-903505 | None:intergenic |
| AGGTTGAATGATGAGTTCAT+TGG | 0.552268 | 6_4:-901887 | None:intergenic |
| TTTGTTTCCGTGTGAGAATG+AGG | 0.554641 | 6_4:-901418 | None:intergenic |
| GCATGGAATTTATACACCAA+TGG | 0.555262 | 6_4:+903712 | Msa0969380:CDS |
| GCTGCATAGATAAGGTATAG+AGG | 0.555467 | 6_4:-903752 | None:intergenic |
| GAGGATGAATGTCATAAAGC+AGG | 0.556500 | 6_4:+905536 | Msa0969380:CDS |
| TTCTCAAGCAAAGCTTCTTG+AGG | 0.557200 | 6_4:+905517 | Msa0969380:CDS |
| AACATGGATAAACTAGGGCA+TGG | 0.559912 | 6_4:+903695 | Msa0969380:CDS |
| CGATAAGGAAAAGGTTCAAG+AGG | 0.561564 | 6_4:-905572 | None:intergenic |
| TTATGGTGGACTAGTTTACA+TGG | 0.565357 | 6_4:+903565 | Msa0969380:CDS |
| CTAACCTTCCCAGAATCACT+AGG | 0.566815 | 6_4:-903779 | None:intergenic |
| AAAACAGCAATTACCTTCGC+AGG | 0.567464 | 6_4:-904356 | None:intergenic |
| GGGAGTAGACTCAAATCCAT+TGG | 0.573580 | 6_4:-903728 | None:intergenic |
| GTGGACTTTCGGGTTCTAGT+GGG | 0.575814 | 6_4:+903399 | Msa0969380:CDS |
| TGCAGGTTCATAGTAAAGTA+CGG | 0.579586 | 6_4:+904199 | Msa0969380:intron |
| GTTGTTGCATATTGTCCTGA+GGG | 0.579897 | 6_4:+905491 | Msa0969380:CDS |
| TCTGCTGCAAGGATAAGGTT+AGG | 0.582026 | 6_4:-903494 | None:intergenic |
| AGGAAAACATGGATAAACTA+GGG | 0.585507 | 6_4:+903690 | Msa0969380:CDS |
| CTGACAAGTCACGATGAGTA+CGG | 0.586349 | 6_4:+901539 | Msa0969380:five_prime_UTR |
| ATGTATTGCGAGAGAAGGAA+AGG | 0.589757 | 6_4:+904275 | Msa0969380:CDS |
| AAGTTGACAAGATCATGAGT+AGG | 0.590139 | 6_4:-901913 | None:intergenic |
| GTCACGATGAGTACGGTATG+AGG | 0.591048 | 6_4:+901546 | Msa0969380:five_prime_UTR |
| ACAAGATCATGAGTAGGATG+AGG | 0.597219 | 6_4:-901907 | None:intergenic |
| ATAGTAAAGTACGGCAGAGG+TGG | 0.599440 | 6_4:+904208 | Msa0969380:CDS |
| CATAGATAAGGTATAGAGGT+GGG | 0.601717 | 6_4:-903748 | None:intergenic |
| TGTTGTTGCATATTGTCCTG+AGG | 0.601777 | 6_4:+905490 | Msa0969380:CDS |
| TAGGCATCTAATCAAGGTGG+AGG | 0.602151 | 6_4:+903466 | Msa0969380:CDS |
| AATGCTGAAGGTTATTATGG+AGG | 0.608746 | 6_4:+902194 | Msa0969380:CDS |
| CTTGCAGCAGAGAAAGAACT+GGG | 0.609467 | 6_4:+903506 | Msa0969380:CDS |
| TTCATAGTAAAGTACGGCAG+AGG | 0.610781 | 6_4:+904205 | Msa0969380:CDS |
| TGTGAAATCAATGCTTGAAG+TGG | 0.615009 | 6_4:+904251 | Msa0969380:CDS |
| GTGGCATGTATTGCGAGAGA+AGG | 0.618829 | 6_4:+904270 | Msa0969380:CDS |
| GAACTTCAACAAGGAAAACA+TGG | 0.620661 | 6_4:+903679 | Msa0969380:intron |
| TCAAAATTTACAGGTAGCGG+AGG | 0.626651 | 6_4:+905464 | Msa0969380:CDS |
| TGCAGGTCTTCAAGATCGGG+TGG | 0.627175 | 6_4:+903535 | Msa0969380:CDS |
| CGGGTGGCGCAAGTTTATGG+TGG | 0.637422 | 6_4:+903551 | Msa0969380:CDS |
| GTTGATAGGATAAATGCTGA+AGG | 0.640418 | 6_4:+902182 | Msa0969380:CDS |
| GCATAGATAAGGTATAGAGG+TGG | 0.644266 | 6_4:-903749 | None:intergenic |
| GAATCCTAGTGATTCTGGGA+AGG | 0.644944 | 6_4:+903775 | Msa0969380:CDS |
| TGAATGATGAGTTCATTGGA+AGG | 0.645465 | 6_4:-901883 | None:intergenic |
| AGATGGTTATATACCTGACG+AGG | 0.645733 | 6_4:-902326 | None:intergenic |
| TCATCGTGACTTGTCAGCAG+GGG | 0.666297 | 6_4:-901533 | None:intergenic |
| ATGTTTGGAGATGATGCACT+TGG | 0.681123 | 6_4:+905392 | Msa0969380:CDS |
| AGTTAGGCATCTAATCAAGG+TGG | 0.684662 | 6_4:+903463 | Msa0969380:CDS |
| TTGTTGCATATTGTCCTGAG+GGG | 0.685114 | 6_4:+905492 | Msa0969380:CDS |
| GTCGCCACCTCATTCTCACA+CGG | 0.685145 | 6_4:+901411 | Msa0969380:five_prime_UTR |
| GTTTCCGTGTGAGAATGAGG+TGG | 0.699837 | 6_4:-901415 | None:intergenic |
| GATGGTTATATACCTGACGA+GGG | 0.721558 | 6_4:-902325 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATAAAAATAAAAGAAAA+CGG | + | chr6_4:901588-901607 | Msa0969380:five_prime_UTR | 10.0% |
| !!! | ATAATTTGAAAATTTTGAAA+GGG | + | chr6_4:904869-904888 | Msa0969380:intron | 10.0% |
| !!! | ATAAAATTCAAAGATTGTTT+TGG | - | chr6_4:902440-902459 | None:intergenic | 15.0% |
| !! | CATAATAATAGATAGAAAAA+TGG | - | chr6_4:902713-902732 | None:intergenic | 15.0% |
| !! | TATCAGTTATAAAAATCAAA+TGG | - | chr6_4:904413-904432 | None:intergenic | 15.0% |
| !!! | TTCAAAATTTTCAAATTATC+CGG | - | chr6_4:904868-904887 | None:intergenic | 15.0% |
| !!! | GATAATTTGAAAATTTTGAA+AGG | + | chr6_4:904868-904887 | Msa0969380:intron | 15.0% |
| !!! | TTTGTATTAAACTTTGTTAT+TGG | + | chr6_4:905343-905362 | Msa0969380:intron | 15.0% |
| !! | AATTTAAAAATGAAAACACA+TGG | + | chr6_4:905740-905759 | Msa0969380:three_prime_UTR | 15.0% |
| !! | ATTTAAAAATGAAAACACAT+GGG | + | chr6_4:905741-905760 | Msa0969380:three_prime_UTR | 15.0% |
| !!! | ATAATTTTGGAAATCAAATT+GGG | - | chr6_4:905892-905911 | None:intergenic | 15.0% |
| !!! | TATAATTTTGGAAATCAAAT+TGG | - | chr6_4:905893-905912 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAACAAGTGATT+GGG | - | chr6_4:901457-901476 | None:intergenic | 20.0% |
| !! | AACAACATAAAAACTCTTAA+AGG | - | chr6_4:902393-902412 | None:intergenic | 20.0% |
| !! | TTATAAAGTAGTAAGTCATA+TGG | + | chr6_4:902577-902596 | Msa0969380:intron | 20.0% |
| !!! | TAAACAATCTAGTTTAGTTT+GGG | - | chr6_4:902842-902861 | None:intergenic | 20.0% |
| !!! | TTAAACAATCTAGTTTAGTT+TGG | - | chr6_4:902843-902862 | None:intergenic | 20.0% |
| !!! | TTATTTTAGAGAAAAGAATC+GGG | - | chr6_4:903963-903982 | None:intergenic | 20.0% |
| !!! | CTTATTTTAGAGAAAAGAAT+CGG | - | chr6_4:903964-903983 | None:intergenic | 20.0% |
| !!! | ATTCTTTTCTCTAAAATAAG+AGG | + | chr6_4:903964-903983 | Msa0969380:intron | 20.0% |
| !!! | TTAATTTTAATTGATGATGC+AGG | + | chr6_4:904182-904201 | Msa0969380:intron | 20.0% |
| !! | TATGTATATCTATATTGTAC+AGG | + | chr6_4:905366-905385 | Msa0969380:intron | 20.0% |
| !! | AAAATTCCAACTCAATTAAT+GGG | - | chr6_4:905688-905707 | None:intergenic | 20.0% |
| !!! | GAGATTCATATGTTTTTTTA+TGG | + | chr6_4:905714-905733 | Msa0969380:three_prime_UTR | 20.0% |
| !! | AATCTTCAATGTTTCAAAAT+TGG | + | chr6_4:905829-905848 | Msa0969380:three_prime_UTR | 20.0% |
| !! | ATCTTCAATGTTTCAAAATT+GGG | + | chr6_4:905830-905849 | Msa0969380:three_prime_UTR | 20.0% |
| !!! | TGATAATGGTACTATAATTT+TGG | - | chr6_4:905905-905924 | None:intergenic | 20.0% |
| ! | GAAGAAAAAAAACAAGTGAT+TGG | - | chr6_4:901458-901477 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTTTTCTTCTTCA+AGG | + | chr6_4:901462-901481 | Msa0969380:five_prime_UTR | 25.0% |
| ! | ATGTAATCAATCACATGTAT+AGG | - | chr6_4:902080-902099 | None:intergenic | 25.0% |
| ! | CATTTAATTCAAATGATCAG+TGG | + | chr6_4:902101-902120 | Msa0969380:intron | 25.0% |
| ! | ATAAATGCTGAAGGTTATTA+TGG | + | chr6_4:902191-902210 | Msa0969380:CDS | 25.0% |
| !! | AACCATCTTGCTATAATTTA+TGG | + | chr6_4:902341-902360 | Msa0969380:intron | 25.0% |
| ! | ATCCATAAATTATAGCAAGA+TGG | - | chr6_4:902346-902365 | None:intergenic | 25.0% |
| ! | TTACATTCAACACAAGAAAA+AGG | - | chr6_4:902689-902708 | None:intergenic | 25.0% |
| !!! | CAGTGTTTTAAAAATCAAAC+TGG | + | chr6_4:902786-902805 | Msa0969380:intron | 25.0% |
| !! | TTTTTAATGTCTCTACAACA+TGG | - | chr6_4:903065-903084 | None:intergenic | 25.0% |
| ! | AAAAATCCTGACTCTAATTT+GGG | - | chr6_4:903102-903121 | None:intergenic | 25.0% |
| ! | AAAAAATCCTGACTCTAATT+TGG | - | chr6_4:903103-903122 | None:intergenic | 25.0% |
| !!! | ATTAGAGTCAGGATTTTTTT+TGG | + | chr6_4:903104-903123 | Msa0969380:intron | 25.0% |
| ! | AAATAATGAATGAGTGAATC+CGG | - | chr6_4:903287-903306 | None:intergenic | 25.0% |
| ! | CAACAGATAGAAATATGAAA+AGG | - | chr6_4:903330-903349 | None:intergenic | 25.0% |
| ! | TTCTTGATTTCTACAAAGTT+AGG | + | chr6_4:903447-903466 | Msa0969380:CDS | 25.0% |
| ! | TGTAATAGCACTATTGTAAA+AGG | - | chr6_4:903861-903880 | None:intergenic | 25.0% |
| !! | AACACCATAAAGTGATATTT+TGG | + | chr6_4:904094-904113 | Msa0969380:intron | 25.0% |
| !! | ACACCATAAAGTGATATTTT+GGG | + | chr6_4:904095-904114 | Msa0969380:intron | 25.0% |
| ! | TCTGTATCATTACATATAGT+TGG | + | chr6_4:904380-904399 | Msa0969380:intron | 25.0% |
| !! | TGATGTTTAAGTTTCAAAGT+TGG | - | chr6_4:904449-904468 | None:intergenic | 25.0% |
| ! | ACATCAACTTACTTATTGAT+AGG | + | chr6_4:904463-904482 | Msa0969380:intron | 25.0% |
| ! | TGATCAATAAATTAGTACAC+TGG | - | chr6_4:904594-904613 | None:intergenic | 25.0% |
| ! | GTACTAATTTATTGATCAGT+AGG | + | chr6_4:904596-904615 | Msa0969380:intron | 25.0% |
| ! | CAAAGCATAATCATATATGA+TGG | - | chr6_4:904971-904990 | None:intergenic | 25.0% |
| !!! | AGATGATAGCTCTTTTATTT+GGG | - | chr6_4:905118-905137 | None:intergenic | 25.0% |
| ! | TTCCCATTCATTTAATTAGT+TGG | - | chr6_4:905308-905327 | None:intergenic | 25.0% |
| ! | TCATTTAAACGATAAGGAAA+AGG | - | chr6_4:905584-905603 | None:intergenic | 25.0% |
| ! | TCCTTATCGTTTAAATGAAA+CGG | + | chr6_4:905586-905605 | Msa0969380:CDS | 25.0% |
| ! | GAAAATTCCAACTCAATTAA+TGG | - | chr6_4:905689-905708 | None:intergenic | 25.0% |
| ! | TCTTCAATGTTTCAAAATTG+GGG | + | chr6_4:905831-905850 | Msa0969380:three_prime_UTR | 25.0% |
| AATCCAAGCGATGTTTATTA+CGG | + | chr6_4:901808-901827 | Msa0969380:CDS | 30.0% | |
| TTAATTCAAATGATCAGTGG+TGG | + | chr6_4:902104-902123 | Msa0969380:intron | 30.0% | |
| ATCCTTGTTAATGTACTTGA+GGG | + | chr6_4:902733-902752 | Msa0969380:intron | 30.0% | |
| ! | TTCTTTTGGCAATTTGATTG+TGG | + | chr6_4:902893-902912 | Msa0969380:intron | 30.0% |
| ! | CAGTTCGGTTTTTATAACAT+TGG | + | chr6_4:902974-902993 | Msa0969380:intron | 30.0% |
| CATTAAAAACCTTTATGTCG+CGG | + | chr6_4:903076-903095 | Msa0969380:intron | 30.0% | |
| !!! | TTTTTGGAACCTTTATGTCA+CGG | + | chr6_4:903120-903139 | Msa0969380:intron | 30.0% |
| GACCTTAAAAAGATGTAACA+TGG | - | chr6_4:903146-903165 | None:intergenic | 30.0% | |
| AAACAAAAGAAAGACCGTAA+GGG | - | chr6_4:903230-903249 | None:intergenic | 30.0% | |
| TAAACAAAAGAAAGACCGTA+AGG | - | chr6_4:903231-903250 | None:intergenic | 30.0% | |
| ! | TTGAATTTTGTGTTTCAGAG+TGG | + | chr6_4:903380-903399 | Msa0969380:intron | 30.0% |
| AGTTGCATCACATGATTAAT+TGG | - | chr6_4:903644-903663 | None:intergenic | 30.0% | |
| ! | GCTTTTATAGAACTTCAACA+AGG | + | chr6_4:903670-903689 | Msa0969380:intron | 30.0% |
| AAGGAAAACATGGATAAACT+AGG | + | chr6_4:903689-903708 | Msa0969380:CDS | 30.0% | |
| AGGAAAACATGGATAAACTA+GGG | + | chr6_4:903690-903709 | Msa0969380:CDS | 30.0% | |
| ! | GCACTATTGTAAAAGGTATA+AGG | - | chr6_4:903854-903873 | None:intergenic | 30.0% |
| TAGCCCAAAATATCACTTTA+TGG | - | chr6_4:904101-904120 | None:intergenic | 30.0% | |
| TATCACTTCTAATAAGAGCA+CGG | + | chr6_4:904119-904138 | Msa0969380:intron | 30.0% | |
| TCATTACATATAGTTGGACT+TGG | + | chr6_4:904386-904405 | Msa0969380:intron | 30.0% | |
| TTAGGCTTAAGTCTATATGT+TGG | - | chr6_4:904538-904557 | None:intergenic | 30.0% | |
| ! | TTAGTAGACTTGCTTAGATT+AGG | - | chr6_4:904556-904575 | None:intergenic | 30.0% |
| TGTGTATTCATGAATCATGT+TGG | - | chr6_4:904705-904724 | None:intergenic | 30.0% | |
| TTAGAACATCGTATTCAACA+AGG | + | chr6_4:904762-904781 | Msa0969380:intron | 30.0% | |
| TAGAACATCGTATTCAACAA+GGG | + | chr6_4:904763-904782 | Msa0969380:intron | 30.0% | |
| CTGGCATCTAATATAAAACA+AGG | + | chr6_4:904787-904806 | Msa0969380:intron | 30.0% | |
| !! | AAAATTTTGAAAGGGACATG+AGG | + | chr6_4:904877-904896 | Msa0969380:intron | 30.0% |
| TATGCTTTGCAAAATCCTTA+AGG | + | chr6_4:904982-905001 | Msa0969380:intron | 30.0% | |
| ATTATGAAATGTGGTCCTTA+AGG | - | chr6_4:905000-905019 | None:intergenic | 30.0% | |
| CTTGAGATGATTATGAAATG+TGG | - | chr6_4:905009-905028 | None:intergenic | 30.0% | |
| TTCATAATCATCTCAAGCTA+AGG | + | chr6_4:905012-905031 | Msa0969380:intron | 30.0% | |
| AACTAATCTGGTAATTCTCA+AGG | + | chr6_4:905040-905059 | Msa0969380:intron | 30.0% | |
| ! | GAGATGATAGCTCTTTTATT+TGG | - | chr6_4:905119-905138 | None:intergenic | 30.0% |
| ! | GTAGGTTATGAGAGTATATT+AGG | - | chr6_4:905143-905162 | None:intergenic | 30.0% |
| !! | ACCTACTTTAATTTTTCCCT+AGG | + | chr6_4:905157-905176 | Msa0969380:intron | 30.0% |
| ACCTAGGGAAAAATTAAAGT+AGG | - | chr6_4:905161-905180 | None:intergenic | 30.0% | |
| GAAAAATACTGTGTAACCTA+GGG | - | chr6_4:905176-905195 | None:intergenic | 30.0% | |
| AGAAAAATACTGTGTAACCT+AGG | - | chr6_4:905177-905196 | None:intergenic | 30.0% | |
| ACGCCAACTAATTAAATGAA+TGG | + | chr6_4:905302-905321 | Msa0969380:intron | 30.0% | |
| CGCCAACTAATTAAATGAAT+GGG | + | chr6_4:905303-905322 | Msa0969380:intron | 30.0% | |
| ATATTGTACAGGTCAATGTT+TGG | + | chr6_4:905377-905396 | Msa0969380:intron | 30.0% | |
| ! | TGGTGATGTGAACATAAAAA+TGG | + | chr6_4:905412-905431 | Msa0969380:CDS | 30.0% |
| TGTGAACATAAAAATGGTAG+AGG | + | chr6_4:905418-905437 | Msa0969380:CDS | 30.0% | |
| TCCGTTTCATTTAAACGATA+AGG | - | chr6_4:905590-905609 | None:intergenic | 30.0% | |
| ACTAGTACATTACATCTTCA+GGG | - | chr6_4:905622-905641 | None:intergenic | 30.0% | |
| TTATATTTGTATCGTGCACA+TGG | + | chr6_4:905801-905820 | Msa0969380:three_prime_UTR | 30.0% | |
| ! | CTCACACGGAAACAAATTTT+AGG | + | chr6_4:901425-901444 | Msa0969380:five_prime_UTR | 35.0% |
| GAGAAAGAGAAAGAGAAAAG+AGG | + | chr6_4:901694-901713 | Msa0969380:five_prime_UTR | 35.0% | |
| TATGCAAGAGTTGGATTGTT+AGG | + | chr6_4:901784-901803 | Msa0969380:CDS | 35.0% | |
| CTTAACGGTTGCAAAGAAAT+TGG | - | chr6_4:901857-901876 | None:intergenic | 35.0% | |
| TGAATGATGAGTTCATTGGA+AGG | - | chr6_4:901886-901905 | None:intergenic | 35.0% | |
| AGGTTGAATGATGAGTTCAT+TGG | - | chr6_4:901890-901909 | None:intergenic | 35.0% | |
| AAGTTGACAAGATCATGAGT+AGG | - | chr6_4:901916-901935 | None:intergenic | 35.0% | |
| TTATGATCACGATCGAAAGA+AGG | + | chr6_4:902002-902021 | Msa0969380:intron | 35.0% | |
| CATGTTGTGTTATGTTATGC+AGG | + | chr6_4:902160-902179 | Msa0969380:intron | 35.0% | |
| !! | GTTATGTTATGCAGGTTGAT+AGG | + | chr6_4:902168-902187 | Msa0969380:intron | 35.0% |
| ! | GTTGATAGGATAAATGCTGA+AGG | + | chr6_4:902182-902201 | Msa0969380:CDS | 35.0% |
| AATGCTGAAGGTTATTATGG+AGG | + | chr6_4:902194-902213 | Msa0969380:CDS | 35.0% | |
| ATCATAGGAGAGAGTGAAAT+TGG | - | chr6_4:902297-902316 | None:intergenic | 35.0% | |
| GATCCTTGTTAATGTACTTG+AGG | + | chr6_4:902732-902751 | Msa0969380:intron | 35.0% | |
| TACCCTCAAGTACATTAACA+AGG | - | chr6_4:902738-902757 | None:intergenic | 35.0% | |
| TCAAACTGGTGAGACATATA+GGG | - | chr6_4:902950-902969 | None:intergenic | 35.0% | |
| ATCAAACTGGTGAGACATAT+AGG | - | chr6_4:902951-902970 | None:intergenic | 35.0% | |
| CACCAGTTTGATTATCAGTT+CGG | + | chr6_4:902959-902978 | Msa0969380:intron | 35.0% | |
| AACCGAACTGATAATCAAAC+TGG | - | chr6_4:902964-902983 | None:intergenic | 35.0% | |
| GTTGTGATCCTTGATATTGT+GGG | + | chr6_4:902996-903015 | Msa0969380:intron | 35.0% | |
| TACGATTTCCCACAATATCA+AGG | - | chr6_4:903007-903026 | None:intergenic | 35.0% | |
| ! | GGCCATGTTACATCTTTTTA+AGG | + | chr6_4:903141-903160 | Msa0969380:intron | 35.0% |
| TTATTTAGCAAGTGCCCTTA+CGG | + | chr6_4:903213-903232 | Msa0969380:intron | 35.0% | |
| !!! | TTCTATCTGTTGTTTTGCTG+AGG | + | chr6_4:903338-903357 | Msa0969380:intron | 35.0% |
| ! | GTTTTGCTGAGGAAATAGTA+TGG | + | chr6_4:903349-903368 | Msa0969380:intron | 35.0% |
| GAAATCAAGAAAGCAGTTCA+AGG | - | chr6_4:903438-903457 | None:intergenic | 35.0% | |
| CAAAGTTAGGCATCTAATCA+AGG | + | chr6_4:903460-903479 | Msa0969380:CDS | 35.0% | |
| !! | TTATGGTGGACTAGTTTACA+TGG | + | chr6_4:903565-903584 | Msa0969380:CDS | 35.0% |
| GAACTTCAACAAGGAAAACA+TGG | + | chr6_4:903679-903698 | Msa0969380:intron | 35.0% | |
| GCATGGAATTTATACACCAA+TGG | + | chr6_4:903712-903731 | Msa0969380:CDS | 35.0% | |
| CATAGATAAGGTATAGAGGT+GGG | - | chr6_4:903751-903770 | None:intergenic | 35.0% | |
| AGAAACAGAACATGCAAGTT+AGG | - | chr6_4:903889-903908 | None:intergenic | 35.0% | |
| ! | ATCACTTCTAATAAGAGCAC+GGG | + | chr6_4:904120-904139 | Msa0969380:intron | 35.0% |
| TGCAGGTTCATAGTAAAGTA+CGG | + | chr6_4:904199-904218 | Msa0969380:intron | 35.0% | |
| TGTGAAATCAATGCTTGAAG+TGG | + | chr6_4:904251-904270 | Msa0969380:CDS | 35.0% | |
| !! | GTAGTTTAGAGCTTTTAGTG+GGG | - | chr6_4:904513-904532 | None:intergenic | 35.0% |
| !! | CGTAGTTTAGAGCTTTTAGT+GGG | - | chr6_4:904514-904533 | None:intergenic | 35.0% |
| !! | TCGTAGTTTAGAGCTTTTAG+TGG | - | chr6_4:904515-904534 | None:intergenic | 35.0% |
| ! | ATGTTGGAACTTTTACCACT+GGG | - | chr6_4:904689-904708 | None:intergenic | 35.0% |
| !! | TAAACTTTTAAGAGCCGACT+GGG | - | chr6_4:904745-904764 | None:intergenic | 35.0% |
| ! | GAGAATTACCAGATTAGTTG+TGG | - | chr6_4:905039-905058 | None:intergenic | 35.0% |
| ! | CACCTTTTGTCCAAACAAAT+AGG | + | chr6_4:905069-905088 | Msa0969380:intron | 35.0% |
| TGCCTATTTGTTTGGACAAA+AGG | - | chr6_4:905074-905093 | None:intergenic | 35.0% | |
| TGTCCAAACAAATAGGCAAA+TGG | + | chr6_4:905076-905095 | Msa0969380:intron | 35.0% | |
| !! | TCTTTTATTTGGGTGTTAGG+TGG | - | chr6_4:905108-905127 | None:intergenic | 35.0% |
| !! | AGCTCTTTTATTTGGGTGTT+AGG | - | chr6_4:905111-905130 | None:intergenic | 35.0% |
| TAAAAATGGTAGAGGTTGCT+AGG | + | chr6_4:905426-905445 | Msa0969380:CDS | 35.0% | |
| !! | GCTACCTGTAAATTTTGATG+CGG | - | chr6_4:905462-905481 | None:intergenic | 35.0% |
| GCATCAAAATTTACAGGTAG+CGG | + | chr6_4:905461-905480 | Msa0969380:CDS | 35.0% | |
| GACTAGTACATTACATCTTC+AGG | - | chr6_4:905623-905642 | None:intergenic | 35.0% | |
| ATCCATCCCATTAATTGAGT+TGG | + | chr6_4:905679-905698 | Msa0969380:three_prime_UTR | 35.0% | |
| TTCCAACTCAATTAATGGGA+TGG | - | chr6_4:905684-905703 | None:intergenic | 35.0% | |
| GGAAATCAAATTGGGTACTT+GGG | - | chr6_4:905884-905903 | None:intergenic | 35.0% | |
| TGGAAATCAAATTGGGTACT+TGG | - | chr6_4:905885-905904 | None:intergenic | 35.0% | |
| TTTGTTTCCGTGTGAGAATG+AGG | - | chr6_4:901421-901440 | None:intergenic | 40.0% | |
| ! | CGGTATGAGGTGAGTTATTT+TGG | + | chr6_4:901559-901578 | Msa0969380:five_prime_UTR | 40.0% |
| !!! | TGAGGTGAGTTATTTTGGTC+TGG | + | chr6_4:901564-901583 | Msa0969380:five_prime_UTR | 40.0% |
| CACAAAGCATATGCAAGAGT+TGG | + | chr6_4:901775-901794 | Msa0969380:CDS | 40.0% | |
| TTGCCGTAATAAACATCGCT+TGG | - | chr6_4:901814-901833 | None:intergenic | 40.0% | |
| ATTGGAAGGAACGAGCTTAA+CGG | - | chr6_4:901872-901891 | None:intergenic | 40.0% | |
| ACAAGATCATGAGTAGGATG+AGG | - | chr6_4:901910-901929 | None:intergenic | 40.0% | |
| CTTCTCTTCTCATCATCAAC+TGG | + | chr6_4:901933-901952 | Msa0969380:CDS | 40.0% | |
| ! | GATCGAAAGAAGGTGTATCT+GGG | + | chr6_4:902012-902031 | Msa0969380:intron | 40.0% |
| ! | ATCGAAAGAAGGTGTATCTG+GGG | + | chr6_4:902013-902032 | Msa0969380:intron | 40.0% |
| ACGAGGGATGTTAGTATCAT+AGG | - | chr6_4:902312-902331 | None:intergenic | 40.0% | |
| GATGGTTATATACCTGACGA+GGG | - | chr6_4:902328-902347 | None:intergenic | 40.0% | |
| AGATGGTTATATACCTGACG+AGG | - | chr6_4:902329-902348 | None:intergenic | 40.0% | |
| !! | GAGGGTATGATTTTAAGTCC+TGG | + | chr6_4:902751-902770 | Msa0969380:intron | 40.0% |
| ATCAAACTGGACAGTTCAAC+CGG | + | chr6_4:902799-902818 | Msa0969380:intron | 40.0% | |
| !! | GGCTTTAAAACACTGATGAC+CGG | - | chr6_4:902821-902840 | None:intergenic | 40.0% |
| AACCTTGAATCGTCCTGATT+CGG | + | chr6_4:902870-902889 | Msa0969380:intron | 40.0% | |
| ATTGCCAAAAGAACCGAATC+AGG | - | chr6_4:902886-902905 | None:intergenic | 40.0% | |
| ! | TGTGGTTTCGTCCTTGTTTA+AGG | + | chr6_4:902911-902930 | Msa0969380:intron | 40.0% |
| ! | GTGGTTTCGTCCTTGTTTAA+GGG | + | chr6_4:902912-902931 | Msa0969380:intron | 40.0% |
| TGGTTCAACTCCCTTAAACA+AGG | - | chr6_4:902925-902944 | None:intergenic | 40.0% | |
| GGTTGTGATCCTTGATATTG+TGG | + | chr6_4:902995-903014 | Msa0969380:intron | 40.0% | |
| ! | TGTGTTTCAGAGTGGACTTT+CGG | + | chr6_4:903388-903407 | Msa0969380:intron | 40.0% |
| AGTTAGGCATCTAATCAAGG+TGG | + | chr6_4:903463-903482 | Msa0969380:CDS | 40.0% | |
| ATCTAATCAAGGTGGAGGTT+AGG | + | chr6_4:903471-903490 | Msa0969380:CDS | 40.0% | |
| AAAGAACTGGGAATAGTTGC+AGG | + | chr6_4:903518-903537 | Msa0969380:CDS | 40.0% | |
| TAGTTGCAGGTCTTCAAGAT+CGG | + | chr6_4:903531-903550 | Msa0969380:CDS | 40.0% | |
| AACATGGATAAACTAGGGCA+TGG | + | chr6_4:903695-903714 | Msa0969380:CDS | 40.0% | |
| GCATAGATAAGGTATAGAGG+TGG | - | chr6_4:903752-903771 | None:intergenic | 40.0% | |
| GCTGCATAGATAAGGTATAG+AGG | - | chr6_4:903755-903774 | None:intergenic | 40.0% | |
| TAGGATTCGCTGCATAGATA+AGG | - | chr6_4:903763-903782 | None:intergenic | 40.0% | |
| ACGGGAAAGTTCGCTTAATT+TGG | + | chr6_4:904138-904157 | Msa0969380:intron | 40.0% | |
| TTCATAGTAAAGTACGGCAG+AGG | + | chr6_4:904205-904224 | Msa0969380:CDS | 40.0% | |
| ATGTATTGCGAGAGAAGGAA+AGG | + | chr6_4:904275-904294 | Msa0969380:CDS | 40.0% | |
| GTTCATGAGAGATGCAAGTT+TGG | - | chr6_4:904325-904344 | None:intergenic | 40.0% | |
| ACCTTCGCAGGTCAAAATTT+CGG | - | chr6_4:904347-904366 | None:intergenic | 40.0% | |
| AAAACAGCAATTACCTTCGC+AGG | - | chr6_4:904359-904378 | None:intergenic | 40.0% | |
| ! | TGTTGGAACTTTTACCACTG+GGG | - | chr6_4:904688-904707 | None:intergenic | 40.0% |
| ! | CATGTTGGAACTTTTACCAC+TGG | - | chr6_4:904690-904709 | None:intergenic | 40.0% |
| !! | AAACTTTTAAGAGCCGACTG+GGG | - | chr6_4:904744-904763 | None:intergenic | 40.0% |
| !! | CTAAACTTTTAAGAGCCGAC+TGG | - | chr6_4:904746-904765 | None:intergenic | 40.0% |
| GTAGTCACATAGAATCTCAG+AGG | + | chr6_4:904899-904918 | Msa0969380:intron | 40.0% | |
| GGACCATTTGCCTATTTGTT+TGG | - | chr6_4:905082-905101 | None:intergenic | 40.0% | |
| ATGTTTGGAGATGATGCACT+TGG | + | chr6_4:905392-905411 | Msa0969380:CDS | 40.0% | |
| ! | TCAAAATTTACAGGTAGCGG+AGG | + | chr6_4:905464-905483 | Msa0969380:CDS | 40.0% |
| TGTTGTTGCATATTGTCCTG+AGG | + | chr6_4:905490-905509 | Msa0969380:CDS | 40.0% | |
| GTTGTTGCATATTGTCCTGA+GGG | + | chr6_4:905491-905510 | Msa0969380:CDS | 40.0% | |
| TTGTTGCATATTGTCCTGAG+GGG | + | chr6_4:905492-905511 | Msa0969380:CDS | 40.0% | |
| TTCTCAAGCAAAGCTTCTTG+AGG | + | chr6_4:905517-905536 | Msa0969380:CDS | 40.0% | |
| GAGGATGAATGTCATAAAGC+AGG | + | chr6_4:905536-905555 | Msa0969380:CDS | 40.0% | |
| CGATAAGGAAAAGGTTCAAG+AGG | - | chr6_4:905575-905594 | None:intergenic | 40.0% | |
| CTGACAAGTCACGATGAGTA+CGG | + | chr6_4:901539-901558 | Msa0969380:five_prime_UTR | 45.0% | |
| ! | CGATCGAAAGAAGGTGTATC+TGG | + | chr6_4:902011-902030 | Msa0969380:intron | 45.0% |
| AACACCTACACATGTGTCGT+CGG | - | chr6_4:902042-902061 | None:intergenic | 45.0% | |
| TCTCTCTGTGCACAATCCAA+TGG | + | chr6_4:902128-902147 | Msa0969380:intron | 45.0% | |
| TGTGCACAATCCAATGGCAT+TGG | + | chr6_4:902134-902153 | Msa0969380:intron | 45.0% | |
| GTGCACAATCCAATGGCATT+GGG | + | chr6_4:902135-902154 | Msa0969380:intron | 45.0% | |
| CAACATGAACCCAATGCCAT+TGG | - | chr6_4:902147-902166 | None:intergenic | 45.0% | |
| TGGAGGAGTTCGATTGCTTA+TGG | + | chr6_4:902211-902230 | Msa0969380:CDS | 45.0% | |
| TGATACTAACATCCCTCGTC+AGG | + | chr6_4:902313-902332 | Msa0969380:CDS | 45.0% | |
| AACCGAATCAGGACGATTCA+AGG | - | chr6_4:902875-902894 | None:intergenic | 45.0% | |
| !!! | TCGTCCTGATTCGGTTCTTT+TGG | + | chr6_4:902879-902898 | Msa0969380:intron | 45.0% |
| CTGGTGAGACATATAGGGTA+TGG | - | chr6_4:902945-902964 | None:intergenic | 45.0% | |
| TAATTTGGGCCGCGACATAA+AGG | - | chr6_4:903088-903107 | None:intergenic | 45.0% | |
| GTAACATGGCCGTGACATAA+AGG | - | chr6_4:903132-903151 | None:intergenic | 45.0% | |
| ! | GTGTTTCAGAGTGGACTTTC+GGG | + | chr6_4:903389-903408 | Msa0969380:intron | 45.0% |
| TAGGCATCTAATCAAGGTGG+AGG | + | chr6_4:903466-903485 | Msa0969380:CDS | 45.0% | |
| TCTGCTGCAAGGATAAGGTT+AGG | - | chr6_4:903497-903516 | None:intergenic | 45.0% | |
| CTTTCTCTGCTGCAAGGATA+AGG | - | chr6_4:903502-903521 | None:intergenic | 45.0% | |
| CTTGCAGCAGAGAAAGAACT+GGG | + | chr6_4:903506-903525 | Msa0969380:CDS | 45.0% | |
| AGTTGCAGGTCTTCAAGATC+GGG | + | chr6_4:903532-903551 | Msa0969380:CDS | 45.0% | |
| GGGAGTAGACTCAAATCCAT+TGG | - | chr6_4:903731-903750 | None:intergenic | 45.0% | |
| CAGCGAATCCTAGTGATTCT+GGG | + | chr6_4:903771-903790 | Msa0969380:CDS | 45.0% | |
| ! | GAATCCTAGTGATTCTGGGA+AGG | + | chr6_4:903775-903794 | Msa0969380:CDS | 45.0% |
| CTAACCTTCCCAGAATCACT+AGG | - | chr6_4:903782-903801 | None:intergenic | 45.0% | |
| GGAAGGTTAGTGTCATCGAA+TGG | + | chr6_4:903792-903811 | Msa0969380:intron | 45.0% | |
| TTGCTGTAGCATGTGCTATG+AGG | + | chr6_4:903990-904009 | Msa0969380:intron | 45.0% | |
| TGTGCTATGAGGCTAAGAAG+AGG | + | chr6_4:904001-904020 | Msa0969380:intron | 45.0% | |
| ATAGTAAAGTACGGCAGAGG+TGG | + | chr6_4:904208-904227 | Msa0969380:CDS | 45.0% | |
| !! | ACCGAAATTTTGACCTGCGA+AGG | + | chr6_4:904343-904362 | Msa0969380:CDS | 45.0% |
| TTGATAGGTAGTCCTTCCCT+TGG | + | chr6_4:904478-904497 | Msa0969380:intron | 45.0% | |
| ! | TAGTCCTTCCCTTGGTTCTT+TGG | + | chr6_4:904486-904505 | Msa0969380:intron | 45.0% |
| CATCGTATTCAACAAGGGTC+TGG | + | chr6_4:904768-904787 | Msa0969380:intron | 45.0% | |
| GCTAAGGACCACAACTAATC+TGG | + | chr6_4:905028-905047 | Msa0969380:intron | 45.0% | |
| TATTTGGGTGTTAGGTGGAG+AGG | - | chr6_4:905103-905122 | None:intergenic | 45.0% | |
| AATGGTAGAGGTTGCTAGGA+AGG | + | chr6_4:905430-905449 | Msa0969380:CDS | 45.0% | |
| GGAGCCGCATCAAAATTTAC+AGG | + | chr6_4:905455-905474 | Msa0969380:CDS | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTAAGA+AGG | + | chr6_4:905226-905245 | Msa0969380:intron | 5.0% |
| GTTTCCGTGTGAGAATGAGG+TGG | - | chr6_4:901418-901437 | None:intergenic | 50.0% | |
| ! | TCATCGTGACTTGTCAGCAG+GGG | - | chr6_4:901536-901555 | None:intergenic | 50.0% |
| ! | CTCATCGTGACTTGTCAGCA+GGG | - | chr6_4:901537-901556 | None:intergenic | 50.0% |
| ! | ACTCATCGTGACTTGTCAGC+AGG | - | chr6_4:901538-901557 | None:intergenic | 50.0% |
| GTCACGATGAGTACGGTATG+AGG | + | chr6_4:901546-901565 | Msa0969380:five_prime_UTR | 50.0% | |
| GTATCCGACGACACATGTGT+AGG | + | chr6_4:902035-902054 | Msa0969380:intron | 50.0% | |
| ACACTGATCACGACACAACC+AGG | - | chr6_4:902772-902791 | None:intergenic | 50.0% | |
| GATGTGAGTGACGTCAATCG+CGG | + | chr6_4:903039-903058 | Msa0969380:intron | 50.0% | |
| TAACCAGTACAGTGCCCTGA+AGG | + | chr6_4:903252-903271 | Msa0969380:intron | 50.0% | |
| !! | AGTGGACTTTCGGGTTCTAG+TGG | + | chr6_4:903398-903417 | Msa0969380:CDS | 50.0% |
| !! | GTGGACTTTCGGGTTCTAGT+GGG | + | chr6_4:903399-903418 | Msa0969380:CDS | 50.0% |
| CCAGTTCTTTCTCTGCTGCA+AGG | - | chr6_4:903508-903527 | None:intergenic | 50.0% | |
| CCTTGCAGCAGAGAAAGAAC+TGG | + | chr6_4:903505-903524 | Msa0969380:CDS | 50.0% | |
| GCAGCGAATCCTAGTGATTC+TGG | + | chr6_4:903770-903789 | Msa0969380:CDS | 50.0% | |
| GTGGCATGTATTGCGAGAGA+AGG | + | chr6_4:904270-904289 | Msa0969380:CDS | 50.0% | |
| AGTGGGGACCAAAGAACCAA+GGG | - | chr6_4:904497-904516 | None:intergenic | 50.0% | |
| TAGTGGGGACCAAAGAACCA+AGG | - | chr6_4:904498-904517 | None:intergenic | 50.0% | |
| GGAGTTGAGCTCAGTATCGT+CGG | + | chr6_4:904617-904636 | Msa0969380:intron | 50.0% | |
| AGCACAAGTTCTTCCCCAGT+CGG | + | chr6_4:904728-904747 | Msa0969380:intron | 50.0% | |
| TCTGCGTGGCATCTTTCTTG+TGG | - | chr6_4:904819-904838 | None:intergenic | 50.0% | |
| ! | CATGCTGGCTGTCTAACTTC+CGG | + | chr6_4:904846-904865 | Msa0969380:intron | 50.0% |
| GTAGAGGTTGCTAGGAAGGT+TGG | + | chr6_4:905434-905453 | Msa0969380:CDS | 50.0% | |
| TTTGCTTGAGAAGTCCCCTC+AGG | - | chr6_4:905509-905528 | None:intergenic | 50.0% | |
| TGGGATGGATGTGCTTCTTC+TGG | - | chr6_4:905669-905688 | None:intergenic | 50.0% | |
| GTCGCCACCTCATTCTCACA+CGG | + | chr6_4:901411-901430 | Msa0969380:five_prime_UTR | 55.0% | |
| TCGCGGCCCAAATTAGAGTC+AGG | + | chr6_4:903093-903112 | Msa0969380:intron | 55.0% | |
| TCCGGCTAAGAACGCCTTCA+GGG | - | chr6_4:903269-903288 | None:intergenic | 55.0% | |
| ATCCGGCTAAGAACGCCTTC+AGG | - | chr6_4:903270-903289 | None:intergenic | 55.0% | |
| TGCAGGTCTTCAAGATCGGG+TGG | + | chr6_4:903535-903554 | Msa0969380:CDS | 55.0% | |
| GATCGGGTGGCGCAAGTTTA+TGG | + | chr6_4:903548-903567 | Msa0969380:CDS | 55.0% | |
| GGGACCAAAGAACCAAGGGA+AGG | - | chr6_4:904493-904512 | None:intergenic | 55.0% | |
| CCACTGGGGTTTAGCACAAG+TGG | - | chr6_4:904674-904693 | None:intergenic | 55.0% | |
| CCACTTGTGCTAAACCCCAG+TGG | + | chr6_4:904671-904690 | Msa0969380:intron | 55.0% | |
| CGGAAGTTAGACAGCCAGCA+TGG | - | chr6_4:904848-904867 | None:intergenic | 55.0% | |
| ! | CGTGACTTGTCAGCAGGGGT+GGG | - | chr6_4:901532-901551 | None:intergenic | 60.0% |
| ! | TCGTGACTTGTCAGCAGGGG+TGG | - | chr6_4:901533-901552 | None:intergenic | 60.0% |
| AGCAGCAGCAGCAGCAGCAA+TGG | + | chr6_4:901741-901760 | Msa0969380:exon | 60.0% | |
| !! | ACGCCTTCAGGGCACTGTAC+TGG | - | chr6_4:903258-903277 | None:intergenic | 60.0% |
| !! | GCCCTGAAGGCGTTCTTAGC+CGG | + | chr6_4:903265-903284 | Msa0969380:intron | 60.0% |
| CGGGTGGCGCAAGTTTATGG+TGG | + | chr6_4:903551-903570 | Msa0969380:CDS | 60.0% | |
| GTACGGCAGAGGTGGCTTGA+TGG | + | chr6_4:904216-904235 | Msa0969380:CDS | 60.0% | |
| CAGCATGGAGCTTGTCTGCG+TGG | - | chr6_4:904833-904852 | None:intergenic | 60.0% | |
| CACGCAGACAAGCTCCATGC+TGG | + | chr6_4:904831-904850 | Msa0969380:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 901375 | 905931 | 901375 | ID=Msa0969380;Name=Msa0969380 |
| chr6_4 | mRNA | 901375 | 905931 | 901375 | ID=Msa0969380-mRNA-1;Parent=Msa0969380;Name=Msa0969380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=385|1|1|1|1|1|6|291|355 |
| chr6_4 | exon | 901375 | 901954 | 901375 | ID=Msa0969380-mRNA-1:exon:433;Parent=Msa0969380-mRNA-1 |
| chr6_4 | exon | 902182 | 902334 | 902182 | ID=Msa0969380-mRNA-1:exon:434;Parent=Msa0969380-mRNA-1 |
| chr6_4 | exon | 903398 | 903586 | 903398 | ID=Msa0969380-mRNA-1:exon:435;Parent=Msa0969380-mRNA-1 |
| chr6_4 | exon | 903680 | 903796 | 903680 | ID=Msa0969380-mRNA-1:exon:436;Parent=Msa0969380-mRNA-1 |
| chr6_4 | exon | 904204 | 904364 | 904204 | ID=Msa0969380-mRNA-1:exon:437;Parent=Msa0969380-mRNA-1 |
| chr6_4 | exon | 905388 | 905931 | 905388 | ID=Msa0969380-mRNA-1:exon:438;Parent=Msa0969380-mRNA-1 |
| chr6_4 | five_prime_UTR | 901375 | 901759 | 901375 | ID=Msa0969380-mRNA-1:five_prime_utr;Parent=Msa0969380-mRNA-1 |
| chr6_4 | CDS | 901760 | 901954 | 901760 | ID=Msa0969380-mRNA-1:cds;Parent=Msa0969380-mRNA-1 |
| chr6_4 | CDS | 902182 | 902334 | 902182 | ID=Msa0969380-mRNA-1:cds;Parent=Msa0969380-mRNA-1 |
| chr6_4 | CDS | 903398 | 903586 | 903398 | ID=Msa0969380-mRNA-1:cds;Parent=Msa0969380-mRNA-1 |
| chr6_4 | CDS | 903680 | 903796 | 903680 | ID=Msa0969380-mRNA-1:cds;Parent=Msa0969380-mRNA-1 |
| chr6_4 | CDS | 904204 | 904364 | 904204 | ID=Msa0969380-mRNA-1:cds;Parent=Msa0969380-mRNA-1 |
| chr6_4 | CDS | 905388 | 905640 | 905388 | ID=Msa0969380-mRNA-1:cds;Parent=Msa0969380-mRNA-1 |
| chr6_4 | three_prime_UTR | 905641 | 905931 | 905641 | ID=Msa0969380-mRNA-1:three_prime_utr;Parent=Msa0969380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
