AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1266600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1266600 MtrunA17_Chr4g0069881 96.262 535 20 0 1 535 1 535 0.0 1022
Msa1266600 MtrunA17_Chr2g0302001 80.709 254 47 1 282 535 186 437 3.42e-155 450
Msa1266600 MtrunA17_Chr2g0302001 69.832 179 52 2 1 177 1 179 9.22e-64 214
Msa1266600 MtrunA17_Chr8g0354911 44.341 539 249 13 44 535 78 612 1.66e-143 427
Msa1266600 MtrunA17_Chr7g0269541 43.376 551 273 15 6 531 16 552 2.29e-143 424
Msa1266600 MtrunA17_Chr1g0192331 42.342 555 271 12 1 534 1 527 1.42e-135 403
Msa1266600 MtrunA17_Chr2g0302021 45.455 440 225 8 105 535 92 525 1.73e-134 400
Msa1266600 MtrunA17_Chr1g0147051 39.759 581 278 14 4 535 50 607 1.19e-133 401
Msa1266600 MtrunA17_Chr1g0195331 41.948 534 264 9 41 535 29 555 1.88e-133 399
Msa1266600 MtrunA17_Chr1g0195301 41.760 534 265 9 41 535 29 555 3.72e-133 398
Msa1266600 MtrunA17_Chr1g0195321 41.760 534 265 9 41 535 29 555 3.72e-133 398
Msa1266600 MtrunA17_Chr3g0080381 41.959 541 261 10 44 535 92 628 7.20e-133 400
Msa1266600 MtrunA17_Chr8g0345281 43.074 527 264 12 40 535 68 589 1.07e-131 395
Msa1266600 MtrunA17_Chr7g0272141 38.378 555 309 8 1 535 1 542 1.26e-131 394
Msa1266600 MtrunA17_Chr7g0269511 40.106 566 289 12 8 535 11 564 1.52e-131 394
Msa1266600 MtrunA17_Chr3g0126771 39.688 577 279 14 4 535 45 597 3.20e-131 394
Msa1266600 MtrunA17_Chr7g0269531 40.643 529 269 9 41 531 40 561 5.88e-131 393
Msa1266600 MtrunA17_Chr1g0175661 40.917 567 279 13 7 535 10 558 4.72e-130 390
Msa1266600 MtrunA17_Chr7g0233801 42.348 477 253 7 75 535 83 553 5.09e-130 390
Msa1266600 MtrunA17_Chr1g0195351 41.698 530 261 10 41 531 29 549 1.90e-129 389
Msa1266600 MtrunA17_Chr8g0391291 40.647 556 277 14 14 535 3 539 1.14e-128 386
Msa1266600 MtrunA17_Chr8g0391311 42.035 521 258 12 44 535 36 541 1.82e-128 385
Msa1266600 MtrunA17_Chr4g0069841 41.785 493 259 11 54 535 41 516 2.03e-128 384
Msa1266600 MtrunA17_Chr4g0011791 42.802 521 255 16 29 535 18 509 1.53e-127 382
Msa1266600 MtrunA17_Chr7g0269521 40.713 533 271 10 41 535 37 562 1.54e-127 384
Msa1266600 MtrunA17_Chr8g0354901 41.782 505 268 9 38 524 74 570 2.79e-127 384
Msa1266600 MtrunA17_Chr7g0233831 39.959 488 266 6 67 535 76 555 8.44e-127 382
Msa1266600 MtrunA17_Chr7g0233771 41.053 475 263 7 75 535 83 554 1.02e-125 379
Msa1266600 MtrunA17_Chr3g0080391 40.000 515 281 11 39 535 70 574 8.83e-124 374
Msa1266600 MtrunA17_Chr4g0069861 41.010 495 262 10 54 535 40 517 2.75e-121 366
Msa1266600 MtrunA17_Chr3g0090091 38.911 514 283 10 38 535 30 528 3.18e-121 366
Msa1266600 MtrunA17_Chr4g0011771 39.522 544 277 14 4 531 2 509 7.18e-121 365
Msa1266600 MtrunA17_Chr3g0079361 39.250 507 290 10 38 535 30 527 1.23e-120 365
Msa1266600 MtrunA17_Chr3g0079351 37.684 544 313 12 1 535 1 527 1.44e-120 365
Msa1266600 MtrunA17_Chr3g0079341 39.250 507 290 10 38 535 30 527 3.10e-120 364
Msa1266600 MtrunA17_Chr4g0011751 40.588 510 258 13 37 535 14 489 2.46e-119 360
Msa1266600 MtrunA17_Chr4g0018371 39.726 511 286 10 40 535 36 539 1.56e-118 360
Msa1266600 MtrunA17_Chr7g0272151 35.182 577 313 11 6 534 19 582 2.56e-115 353
Msa1266600 MtrunA17_Chr1g0192321 36.813 546 293 13 31 534 47 582 1.46e-111 343
Msa1266600 MtrunA17_Chr1g0192311 35.534 515 309 9 37 531 55 566 1.32e-109 338
Msa1266600 MtrunA17_Chr1g0192281 35.534 515 309 9 37 531 55 566 1.32e-109 338
Msa1266600 MtrunA17_Chr4g0000121 36.449 535 305 12 21 531 30 553 3.90e-109 337
Msa1266600 MtrunA17_Chr1g0192301 36.449 535 305 12 21 531 48 571 3.90e-109 337
Msa1266600 MtrunA17_Chr1g0194091 38.046 481 257 8 87 531 90 565 7.15e-108 333
Msa1266600 MtrunA17_Chr1g0195311 55.805 267 116 1 269 535 50 314 7.17e-107 322
Msa1266600 MtrunA17_Chr8g0345211 39.114 519 284 14 38 535 75 582 3.89e-106 329
Msa1266600 MtrunA17_Chr7g0270691 36.187 514 305 11 40 534 39 548 9.74e-101 314
Msa1266600 MtrunA17_Chr4g0069891 36.782 522 295 12 40 535 81 593 5.21e-100 314
Msa1266600 MtrunA17_Chr1g0194081 34.747 495 282 11 69 534 80 562 5.57e-95 300
Msa1266600 MtrunA17_Chr7g0270661 37.558 434 229 8 105 502 108 535 1.39e-91 291
Msa1266600 MtrunA17_Chr7g0270671 37.558 434 229 8 105 502 108 535 1.39e-91 291
Msa1266600 MtrunA17_Chr7g0270651 35.938 448 244 8 105 515 108 549 1.73e-91 291
Msa1266600 MtrunA17_Chr8g0384121 34.574 564 308 16 8 534 24 563 9.41e-91 289
Msa1266600 MtrunA17_Chr3g0129921 33.993 556 319 15 8 534 27 563 2.04e-87 280
Msa1266600 MtrunA17_Chr4g0067611 33.652 523 309 13 40 534 59 571 7.01e-87 279
Msa1266600 MtrunA17_Chr4g0067601 33.141 519 317 11 40 534 59 571 2.45e-86 278
Msa1266600 MtrunA17_Chr7g0234711 51.724 232 110 2 305 535 39 269 4.86e-86 267
Msa1266600 MtrunA17_Chr2g0295531 31.712 514 315 11 40 531 43 542 6.99e-84 272
Msa1266600 MtrunA17_Chr2g0301931 45.105 286 151 3 250 535 13 292 3.57e-82 258
Msa1266600 MtrunA17_Chr7g0270631 34.956 452 243 9 105 515 96 537 1.07e-81 276
Msa1266600 MtrunA17_Chr7g0270631 34.590 451 254 9 105 515 644 1093 2.49e-71 247
Msa1266600 MtrunA17_Chr5g0437831 42.433 337 179 6 207 534 52 382 3.64e-81 258
Msa1266600 MtrunA17_Chr2g0295551 32.571 525 307 14 40 534 56 563 5.94e-81 263
Msa1266600 MtrunA17_Chr8g0380581 40.061 327 192 4 207 531 48 372 2.75e-79 253
Msa1266600 MtrunA17_Chr7g0268241 41.433 321 173 5 217 535 43 350 2.22e-78 250
Msa1266600 MtrunA17_Chr2g0334111 39.623 318 176 4 219 535 21 323 3.30e-74 238
Msa1266600 MtrunA17_Chr2g0295541 30.811 555 308 15 40 534 56 594 4.64e-74 246
Msa1266600 MtrunA17_Chr7g0271381 29.672 519 328 12 35 534 55 555 1.13e-63 217
Msa1266600 MtrunA17_Chr6g0453551 37.255 306 167 5 223 518 5 295 3.06e-58 196
Msa1266600 MtrunA17_Chr7g0217941 35.948 306 171 6 223 518 5 295 4.56e-54 185
Msa1266600 MtrunA17_Chr1g0194311 34.104 346 194 7 189 524 47 368 1.32e-52 183
Msa1266600 MtrunA17_Chr6g0487101 37.171 304 164 9 232 524 93 380 2.09e-52 182
Msa1266600 MtrunA17_Chr6g0466961 36.218 312 171 8 224 529 40 329 1.24e-51 179
Msa1266600 MtrunA17_Chr8g0389771 36.039 308 168 9 232 526 88 379 1.33e-51 180
Msa1266600 MtrunA17_Chr6g0466951 33.333 312 180 9 224 529 69 358 5.33e-49 173
Msa1266600 MtrunA17_Chr7g0258341 33.544 316 187 6 219 524 85 387 1.04e-46 167
Msa1266600 MtrunA17_Chr5g0446301 35.390 308 169 8 230 524 67 357 4.44e-46 165
Msa1266600 MtrunA17_Chr5g0399221 31.420 331 198 8 209 527 49 362 1.10e-45 164
Msa1266600 MtrunA17_Chr1g0161731 31.034 319 196 6 213 524 38 339 5.14e-44 159
Msa1266600 MtrunA17_Chr4g0070051 29.938 324 196 9 211 524 41 343 7.03e-43 156
Msa1266600 MtrunA17_Chr7g0265201 34.641 306 172 7 226 524 101 385 1.11e-42 156
Msa1266600 MtrunA17_Chr8g0351871 31.833 311 183 8 223 524 32 322 6.12e-38 142
Msa1266600 MtrunA17_Chr2g0294321 31.746 315 187 8 219 524 51 346 8.84e-37 139
Msa1266600 MtrunA17_Chr8g0391261 45.985 137 71 2 400 535 32 166 3.00e-35 129
Msa1266600 MtrunA17_Chr5g0440871 31.629 313 187 7 212 524 33 318 2.15e-34 132
Msa1266600 MtrunA17_Chr4g0037751 30.744 309 192 9 222 524 69 361 1.81e-33 130
Msa1266600 MtrunA17_Chr2g0299431 36.036 222 129 6 214 427 40 256 7.75e-33 127
Msa1266600 MtrunA17_Chr5g0420831 30.824 279 173 7 223 495 70 334 1.65e-31 125
Msa1266600 MtrunA17_Chr2g0295851 29.114 316 185 10 219 524 50 336 1.85e-30 121
Msa1266600 MtrunA17_Chr8g0391281 32.759 290 154 10 44 305 34 310 1.04e-29 119
Msa1266600 MtrunA17_Chr6g0459781 34.682 173 101 4 223 385 12 182 9.70e-28 110
Msa1266600 MtrunA17_Chr5g0437821 39.259 135 81 1 337 470 4 138 1.04e-25 102
Msa1266600 MtrunA17_Chr4g0025841 31.148 244 151 4 224 467 37 263 1.15e-25 106
Msa1266600 MtrunA17_Chr7g0265161 35.838 173 78 4 298 465 14 158 6.33e-23 97.8
Msa1266600 MtrunA17_Chr7g0234731 29.197 274 178 8 38 303 49 314 1.48e-21 95.5
Msa1266600 MtrunA17_Chr5g0440901 33.813 139 83 1 329 467 13 142 1.23e-20 88.6
Msa1266600 MtrunA17_Chr2g0314691 32.597 181 97 5 321 496 15 175 3.27e-20 89.0
Msa1266600 MtrunA17_Chr5g0440891 34.524 168 101 3 222 388 46 205 3.10e-18 83.6
Msa1266600 MtrunA17_Chr6g0460141 36.842 133 76 3 254 378 7 139 1.07e-16 77.4
Msa1266600 MtrunA17_Chr6g0459791 36.000 125 68 3 400 524 4 116 2.33e-16 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1266600 AT2G26440.1 62.188 521 178 6 32 535 29 547 0.0 652
Msa1266600 AT4G33220.1 45.714 490 233 9 74 535 39 523 1.96e-143 424
Msa1266600 AT3G43270.1 48.230 452 207 9 105 535 80 525 4.64e-140 415
Msa1266600 AT4G02330.1 41.368 585 275 14 4 535 2 571 2.61e-138 412
Msa1266600 AT1G02810.1 40.168 595 275 13 4 535 1 577 6.55e-137 409
Msa1266600 AT4G33220.2 49.630 405 179 7 153 535 1 402 2.60e-134 396
Msa1266600 AT4G02320.1 43.326 487 245 8 68 531 36 514 6.83e-133 396
Msa1266600 AT3G05620.1 44.321 449 221 5 105 535 104 541 1.03e-132 397
Msa1266600 AT1G53830.1 41.513 542 270 12 27 531 52 583 5.87e-128 386
Msa1266600 AT2G47550.1 44.731 465 220 7 104 535 98 558 1.19e-126 382
Msa1266600 AT4G02300.1 42.531 482 258 6 69 534 53 531 1.46e-126 380
Msa1266600 AT3G10720.2 38.447 541 276 12 44 535 83 615 4.94e-126 382
Msa1266600 AT3G49220.1 41.923 520 270 10 39 535 86 596 6.42e-125 379
Msa1266600 AT3G49220.3 41.923 520 270 10 39 535 131 641 1.85e-124 379
Msa1266600 AT3G14310.1 39.179 536 284 9 40 535 59 592 2.65e-124 377
Msa1266600 AT5G53370.1 40.504 516 284 10 39 535 74 585 4.41e-124 376
Msa1266600 AT5G51500.1 40.154 518 285 8 30 531 28 536 1.20e-123 374
Msa1266600 AT5G53370.2 40.504 516 284 10 39 535 110 621 2.61e-123 375
Msa1266600 AT3G10710.1 40.316 506 280 10 39 535 69 561 3.32e-123 373
Msa1266600 AT1G11580.1 42.350 451 240 8 95 533 113 555 4.27e-122 370
Msa1266600 AT1G11580.2 42.350 451 240 8 95 533 134 576 6.02e-122 370
Msa1266600 AT5G51490.1 40.711 506 281 9 43 535 37 536 6.97e-122 369
Msa1266600 AT5G04970.1 38.476 538 280 11 44 535 88 620 5.21e-121 369
Msa1266600 AT2G43050.1 43.172 454 223 11 94 535 86 516 1.03e-117 357
Msa1266600 AT5G04960.1 38.386 508 286 11 39 532 67 561 2.81e-117 358
Msa1266600 AT1G23200.1 38.534 532 272 13 44 535 38 554 7.22e-117 357
Msa1266600 AT5G27870.1 37.187 519 296 9 37 535 54 562 3.37e-115 358
Msa1266600 AT3G60730.1 44.573 433 196 9 137 535 97 519 8.55e-115 350
Msa1266600 AT3G59010.1 44.820 444 214 12 106 535 102 528 1.66e-114 350
Msa1266600 AT4G00190.1 39.357 498 259 14 43 531 7 470 1.79e-113 345
Msa1266600 AT3G05610.1 35.932 526 303 10 33 535 51 565 1.44e-112 349
Msa1266600 AT2G45220.1 40.039 517 254 16 40 535 30 511 3.32e-112 343
Msa1266600 AT3G47400.1 37.170 530 274 12 43 535 87 594 2.75e-111 343
Msa1266600 AT1G53840.1 38.246 536 286 13 24 527 57 579 2.75e-111 343
Msa1266600 AT5G49180.1 35.036 548 328 9 10 531 21 566 5.42e-109 337
Msa1266600 AT2G26450.1 37.182 511 298 8 40 535 109 611 9.19e-109 337
Msa1266600 AT4G33230.1 37.765 519 293 12 40 535 95 606 2.19e-108 336
Msa1266600 AT5G20860.2 39.545 440 240 7 109 535 112 538 4.17e-106 328
Msa1266600 AT3G10720.1 54.023 261 118 1 275 535 1 259 2.97e-105 316
Msa1266600 AT4G03930.1 39.770 435 246 7 110 535 97 524 3.58e-105 325
Msa1266600 AT1G11590.1 39.168 457 251 9 95 535 79 524 1.77e-104 323
Msa1266600 AT3G27980.1 42.289 402 215 7 140 535 107 497 4.04e-104 322
Msa1266600 AT3G14300.1 38.343 519 271 16 38 524 457 958 1.01e-103 333
Msa1266600 AT3G06830.1 34.043 517 315 9 39 531 50 564 3.27e-96 303
Msa1266600 AT1G11370.1 52.066 242 116 0 224 465 46 287 3.56e-88 273
Msa1266600 AT5G20860.1 36.277 419 213 6 109 514 112 489 2.59e-86 276
Msa1266600 AT4G15980.1 42.903 310 174 2 224 532 392 699 1.34e-80 266
Msa1266600 AT4G15980.2 42.903 310 174 2 224 532 402 709 2.62e-80 266
Msa1266600 AT5G09760.1 33.461 523 292 15 38 523 43 546 4.71e-80 261
Msa1266600 AT5G09760.2 33.461 523 292 15 38 523 69 572 1.07e-79 261
Msa1266600 AT5G64640.1 32.775 537 292 18 37 528 90 602 1.07e-76 253
Msa1266600 AT3G62170.1 41.083 314 179 4 225 535 278 588 1.20e-70 237
Msa1266600 AT2G47030.1 28.353 589 347 15 10 535 12 588 2.03e-69 234
Msa1266600 AT2G47040.1 41.083 314 179 4 225 535 285 595 2.22e-67 228
Msa1266600 AT3G29090.1 35.806 310 174 6 219 518 2 296 3.21e-56 191
Msa1266600 AT2G36710.1 37.231 325 181 7 207 524 77 385 7.19e-54 187
Msa1266600 AT5G19730.1 37.500 304 163 8 232 524 94 381 1.52e-53 186
Msa1266600 AT1G05310.1 35.220 318 177 6 220 524 87 388 2.91e-51 180
Msa1266600 AT2G36700.1 35.505 307 179 5 223 524 41 333 2.18e-49 173
Msa1266600 AT5G47500.1 31.611 329 198 8 208 524 44 357 2.16e-48 172
Msa1266600 AT2G21610.2 36.066 305 170 9 223 524 55 337 1.08e-46 167
Msa1266600 AT2G21610.1 36.066 305 170 9 223 524 50 332 1.18e-46 167
Msa1266600 AT3G17060.1 33.866 313 183 7 219 524 41 336 4.02e-46 165
Msa1266600 AT5G55590.1 35.350 314 175 8 223 524 81 378 1.67e-44 162
Msa1266600 AT5G07430.1 32.372 312 189 7 218 524 61 355 3.32e-42 155
Msa1266600 AT5G55590.2 37.354 257 137 6 223 467 81 325 6.09e-42 153
Msa1266600 AT1G44980.1 46.061 165 89 0 224 388 78 242 2.17e-41 149
Msa1266600 AT3G24130.1 30.189 318 194 7 224 530 34 334 4.04e-38 143
Msa1266600 AT5G18990.1 30.573 314 192 7 197 499 2 300 6.55e-38 142
Msa1266600 AT5G07420.1 31.847 314 188 8 218 524 61 355 3.55e-37 141
Msa1266600 AT5G61680.1 30.794 315 191 9 218 524 63 358 2.07e-36 139
Msa1266600 AT2G19150.1 33.684 285 164 7 224 499 41 309 3.35e-36 138
Msa1266600 AT1G69940.1 29.393 313 197 9 218 524 61 355 1.30e-34 134
Msa1266600 AT5G07410.1 29.393 313 197 9 218 524 61 355 2.08e-34 133
Msa1266600 AT5G26810.1 31.210 314 193 6 222 524 32 333 2.79e-33 130
Msa1266600 AT2G47280.1 30.745 322 191 10 224 534 35 335 4.63e-32 126
Msa1266600 AT2G19150.2 33.333 255 147 6 224 469 41 281 8.09e-32 124
Msa1266600 AT3G49220.2 32.343 303 159 10 39 312 131 416 3.76e-27 114

Find 88 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGACAATAGATTACATATT+TGG 0.158912 8_2:+71459873 Msa1266600:CDS
TATGGTGAGTTTGCAAATTA+TGG 0.168452 8_2:+71460206 Msa1266600:CDS
ATCCTAGCATAGCTGTTATT+TGG 0.183966 8_2:-71459120 None:intergenic
GCAAATTATGGACCTGGTTC+TGG 0.184725 8_2:+71460218 Msa1266600:CDS
GGCCTTGGAGGGTTTATTCT+AGG 0.265089 8_2:+71460087 Msa1266600:CDS
TAGCTAAAATCGAACAGTTT+TGG 0.265371 8_2:-71460016 None:intergenic
GGGTTGGACACTTTGTATTA+TGG 0.267381 8_2:+71460188 Msa1266600:CDS
ACATGGAAACCGGCGTTTAA+TGG 0.268525 8_2:+71458972 Msa1266600:CDS
ACTGTTTCAGAGTTTATTAT+TGG 0.274401 8_2:+71460305 Msa1266600:CDS
GAAAGCTTAGATTCTGCTTC+AGG 0.295028 8_2:+71458847 Msa1266600:CDS
ATCACCAAGTAGAACAATAT+TGG 0.295403 8_2:-71459202 None:intergenic
ATGGTTAGGGTATCATTTAA+TGG 0.316270 8_2:+71460259 Msa1266600:CDS
GATGAATTGAAGCAAACTTC+AGG 0.327484 8_2:-71458535 None:intergenic
AAAGTCAATGGCTTCATTAA+TGG 0.338627 8_2:-71459094 None:intergenic
TTCTAAACATGTGTTCTTGT+TGG 0.356337 8_2:-71458827 None:intergenic
TGGTCTTCTGATGATGATAA+AGG 0.357864 8_2:+71460167 Msa1266600:CDS
ACCTTCAGATCTGCAACTTT+AGG 0.361505 8_2:+71459279 Msa1266600:CDS
AGAAGGATGTTAATGATGTT+TGG 0.368270 8_2:-71458586 None:intergenic
CAAATTATGGACCTGGTTCT+GGG 0.376661 8_2:+71460219 Msa1266600:CDS
CTGTCAGCGGTTTCTGGTGA+AGG 0.388701 8_2:+71459675 Msa1266600:intron
GCAACTGCTTGATGCTTCTC+TGG 0.401565 8_2:-71459738 None:intergenic
GATAACCGAGTGAAATGGTT+AGG 0.402758 8_2:+71460245 Msa1266600:CDS
TCCATCAACATCACTTCTAT+TGG 0.413607 8_2:-71459250 None:intergenic
AACATGTGTTCTTGTTGGTA+AGG 0.427562 8_2:-71458822 None:intergenic
GAAGCTCTTACCTCAGGCTT+AGG 0.446698 8_2:-71458943 None:intergenic
AGTTTATTATTGGTGATGCT+TGG 0.457881 8_2:+71460315 Msa1266600:CDS
CCTTTAGAAGCTCTTACCTC+AGG 0.459729 8_2:-71458949 None:intergenic
CTTCTAAAGGACATGGAAAC+CGG 0.462530 8_2:+71458962 Msa1266600:CDS
AAAACCAATATTGTTCTACT+TGG 0.463086 8_2:+71459198 Msa1266600:CDS
ATGAATTGAAGCAAACTTCA+GGG 0.465621 8_2:-71458534 None:intergenic
ATTATTGGTGATGCTTGGAT+TGG 0.469612 8_2:+71460320 Msa1266600:CDS
ATAATAATCTATGTGAAAGA+AGG 0.472192 8_2:+71459141 Msa1266600:CDS
AGAGTTACCTTGGAAGGCCT+TGG 0.474243 8_2:+71460072 Msa1266600:CDS
GATCAAATCCCATCATCATA+AGG 0.490605 8_2:-71460356 None:intergenic
GTTATTTGGAGCAAAGTCAA+TGG 0.493661 8_2:-71459106 None:intergenic
GCCAATAGAAGTGATGTTGA+TGG 0.496027 8_2:+71459249 Msa1266600:CDS
TTGAAGCAAACTTCAGGGTA+TGG 0.499680 8_2:-71458529 None:intergenic
CGGTTATCCGTCCCAGAACC+AGG 0.500538 8_2:-71460230 None:intergenic
GAAATGCCAGTGTCTTCATC+AGG 0.503049 8_2:-71459990 None:intergenic
TTTCAGATATTGATACTTGG+AGG 0.508364 8_2:-71458615 None:intergenic
AGCCACAACAATCACATTGT+CGG 0.515378 8_2:-71459046 None:intergenic
GGACGGATAACCGAGTGAAA+TGG 0.516534 8_2:+71460240 Msa1266600:CDS
AATATTGTTCTACTTGGTGA+TGG 0.519268 8_2:+71459204 Msa1266600:CDS
TAATAATCTATGTGAAAGAA+GGG 0.519631 8_2:+71459142 Msa1266600:CDS
TGATGTGTTCATTGATCCAA+TGG 0.520276 8_2:+71460133 Msa1266600:CDS
GTTACCTTGGAAGGCCTTGG+AGG 0.522680 8_2:+71460075 Msa1266600:CDS
AACATCATAGAGAACAAAAG+AGG 0.532418 8_2:+71458676 Msa1266600:CDS
GTGATTGTTGTGGCTGCAGA+TGG 0.533920 8_2:+71459054 Msa1266600:CDS
TGGTTTCAGATATTGATACT+TGG 0.536909 8_2:-71458618 None:intergenic
GAATTGATTAGATAGCTTTG+TGG 0.536977 8_2:-71458638 None:intergenic
ACAGTGTATTGGTTAGGTAA+TGG 0.537504 8_2:-71459942 None:intergenic
TGAAAGCTAAAGTGTGTGAA+TGG 0.538443 8_2:-71458435 None:intergenic
GTTGTGGCTGCAGATGGAAC+TGG 0.540466 8_2:+71459060 Msa1266600:CDS
TTCTGATGATGATAAAGGGT+TGG 0.540730 8_2:+71460172 Msa1266600:CDS
GGTCTTCTGATGATGATAAA+GGG 0.547079 8_2:+71460168 Msa1266600:CDS
TTCAGATATTGATACTTGGA+GGG 0.549415 8_2:-71458614 None:intergenic
ACATGTGTTCTTGTTGGTAA+GGG 0.551234 8_2:-71458821 None:intergenic
ACCTAAAGTTGCAGATCTGA+AGG 0.551357 8_2:-71459280 None:intergenic
ATACTTGGAGGGAATGAAGA+AGG 0.552774 8_2:-71458603 None:intergenic
AACAACATGAAGAGTTACCT+TGG 0.555010 8_2:+71460062 Msa1266600:CDS
GTGATGACAGTGTATTGGTT+AGG 0.562594 8_2:-71459948 None:intergenic
TTACCTTGGAAGGCCTTGGA+GGG 0.578441 8_2:+71460076 Msa1266600:CDS
AAACCCTCCAAGGCCTTCCA+AGG 0.578788 8_2:-71460079 None:intergenic
GTGCAGTGATGACAGTGTAT+TGG 0.580428 8_2:-71459953 None:intergenic
ATAACCGAGTGAAATGGTTA+GGG 0.580443 8_2:+71460246 Msa1266600:CDS
GACCACTTAGTCCATCCCAT+TGG 0.585134 8_2:-71460149 None:intergenic
ATCCAATGGGATGGACTAAG+TGG 0.585499 8_2:+71460147 Msa1266600:CDS
GTAAGAGCTTCTAAAGGACA+TGG 0.586185 8_2:+71458955 Msa1266600:CDS
ACATGAAGAGTTACCTTGGA+AGG 0.588730 8_2:+71460066 Msa1266600:CDS
GAGTTTGCAAATTATGGACC+TGG 0.593606 8_2:+71460212 Msa1266600:CDS
AGTGAACATAAAGTGTGTCT+TGG 0.595293 8_2:-71459815 None:intergenic
CTCCAAATAACAGCTATGCT+AGG 0.598592 8_2:+71459118 Msa1266600:CDS
GTTTAATGGATTCTCTCATG+TGG 0.602528 8_2:+71458986 Msa1266600:CDS
TTATGGACCTGGTTCTGGGA+CGG 0.609432 8_2:+71460223 Msa1266600:CDS
GTCCTAGAATAAACCCTCCA+AGG 0.611715 8_2:-71460089 None:intergenic
CCTGAGGTAAGAGCTTCTAA+AGG 0.619587 8_2:+71458949 Msa1266600:CDS
GTCAATGTTTCCTAAGCCTG+AGG 0.626799 8_2:+71458933 Msa1266600:CDS
CAATGTTGTTGTGGAAGAAG+TGG 0.630302 8_2:-71458464 None:intergenic
GTATGGAGTAGTTCTGCAGA+AGG 0.632268 8_2:-71458512 None:intergenic
TGTTCATTGATCCAATGGGA+TGG 0.634149 8_2:+71460138 Msa1266600:CDS
GATGTGTTCATTGATCCAAT+GGG 0.636999 8_2:+71460134 Msa1266600:CDS
ATAGAAGTGATGTTGATGGA+TGG 0.641423 8_2:+71459253 Msa1266600:CDS
GATTCACCTGATGAAGACAC+TGG 0.652328 8_2:+71459984 Msa1266600:CDS
GATACCCTAACCATTTCACT+CGG 0.660268 8_2:-71460250 None:intergenic
CACCGACAATGTGATTGTTG+TGG 0.664096 8_2:+71459044 Msa1266600:CDS
TGAGAGAATCCATTAAACGC+CGG 0.664960 8_2:-71458981 None:intergenic
TAAAGTTGCAGATCTGAAGG+TGG 0.679551 8_2:-71459277 None:intergenic
TGTGAAAGAAGGGATATACG+AGG 0.755347 8_2:+71459152 Msa1266600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAAAATGTCTCAATTTT+TGG + chr8_2:71459460-71459479 Msa1266600:intron 15.0%
!!! ATAAAAAATGTCTCAATTTT+TGG + chr8_2:71459460-71459479 Msa1266600:intron 15.0%
!! ATAATAATCTATGTGAAAGA+AGG + chr8_2:71459141-71459160 Msa1266600:CDS 20.0%
!! TAATAATCTATGTGAAAGAA+GGG + chr8_2:71459142-71459161 Msa1266600:CDS 20.0%
!! CTGACAGAAAAAAAAAATAA+GGG - chr8_2:71459662-71459681 None:intergenic 20.0%
!!! TTATTTTTTTTTTCTGTCAG+CGG + chr8_2:71459662-71459681 Msa1266600:intron 20.0%
!! ATAATAATCTATGTGAAAGA+AGG + chr8_2:71459141-71459160 Msa1266600:CDS 20.0%
!! TAATAATCTATGTGAAAGAA+GGG + chr8_2:71459142-71459161 Msa1266600:CDS 20.0%
!! CTGACAGAAAAAAAAAATAA+GGG - chr8_2:71459662-71459681 None:intergenic 20.0%
!!! TTATTTTTTTTTTCTGTCAG+CGG + chr8_2:71459662-71459681 Msa1266600:intron 20.0%
!!! TGATCTTTTTAGTGAAGATA+AGG - chr8_2:71458737-71458756 None:intergenic 25.0%
! TCACTAAAAAGATCATTATC+TGG + chr8_2:71458742-71458761 Msa1266600:CDS 25.0%
! AAAACCAATATTGTTCTACT+TGG + chr8_2:71459198-71459217 Msa1266600:CDS 25.0%
! ACTCAATTTCTAACGAATAA+AGG - chr8_2:71459398-71459417 None:intergenic 25.0%
!!! CTCAATTTTTGGATAGTAAT+AGG + chr8_2:71459471-71459490 Msa1266600:intron 25.0%
!! TTGGATAGTAATAGGTATTT+TGG + chr8_2:71459479-71459498 Msa1266600:intron 25.0%
! GACACAATACTATAATTTCA+AGG - chr8_2:71459570-71459589 None:intergenic 25.0%
! GCTGACAGAAAAAAAAAATA+AGG - chr8_2:71459663-71459682 None:intergenic 25.0%
!! TTTTACAAATGTGCAATGTA+TGG + chr8_2:71459789-71459808 Msa1266600:CDS 25.0%
! ACTGTTTCAGAGTTTATTAT+TGG + chr8_2:71460305-71460324 Msa1266600:CDS 25.0%
!!! TGATCTTTTTAGTGAAGATA+AGG - chr8_2:71458737-71458756 None:intergenic 25.0%
! TCACTAAAAAGATCATTATC+TGG + chr8_2:71458742-71458761 Msa1266600:CDS 25.0%
! AAAACCAATATTGTTCTACT+TGG + chr8_2:71459198-71459217 Msa1266600:CDS 25.0%
! ACTCAATTTCTAACGAATAA+AGG - chr8_2:71459398-71459417 None:intergenic 25.0%
!!! CTCAATTTTTGGATAGTAAT+AGG + chr8_2:71459471-71459490 Msa1266600:intron 25.0%
!! TTGGATAGTAATAGGTATTT+TGG + chr8_2:71459479-71459498 Msa1266600:intron 25.0%
! GACACAATACTATAATTTCA+AGG - chr8_2:71459570-71459589 None:intergenic 25.0%
! GCTGACAGAAAAAAAAAATA+AGG - chr8_2:71459663-71459682 None:intergenic 25.0%
!! TTTTACAAATGTGCAATGTA+TGG + chr8_2:71459789-71459808 Msa1266600:CDS 25.0%
! ACTGTTTCAGAGTTTATTAT+TGG + chr8_2:71460305-71460324 Msa1266600:CDS 25.0%
ATGAATTGAAGCAAACTTCA+GGG - chr8_2:71458537-71458556 None:intergenic 30.0%
AGAAGGATGTTAATGATGTT+TGG - chr8_2:71458589-71458608 None:intergenic 30.0%
TTCAGATATTGATACTTGGA+GGG - chr8_2:71458617-71458636 None:intergenic 30.0%
TTTCAGATATTGATACTTGG+AGG - chr8_2:71458618-71458637 None:intergenic 30.0%
TGGTTTCAGATATTGATACT+TGG - chr8_2:71458621-71458640 None:intergenic 30.0%
! GAATTGATTAGATAGCTTTG+TGG - chr8_2:71458641-71458660 None:intergenic 30.0%
AACATCATAGAGAACAAAAG+AGG + chr8_2:71458676-71458695 Msa1266600:CDS 30.0%
TTCTAAACATGTGTTCTTGT+TGG - chr8_2:71458830-71458849 None:intergenic 30.0%
AAAGTCAATGGCTTCATTAA+TGG - chr8_2:71459097-71459116 None:intergenic 30.0%
ATCACCAAGTAGAACAATAT+TGG - chr8_2:71459205-71459224 None:intergenic 30.0%
! AATATTGTTCTACTTGGTGA+TGG + chr8_2:71459204-71459223 Msa1266600:CDS 30.0%
TGAGTCAATTGACTAAATGT+TGG + chr8_2:71459413-71459432 Msa1266600:intron 30.0%
!!! TTTTGGTTTCTTAGAAATCC+TGG + chr8_2:71459496-71459515 Msa1266600:intron 30.0%
CTCAATTGTGAGAATAACAA+CGG - chr8_2:71459530-71459549 None:intergenic 30.0%
TTGACATATCGATGATATGA+GGG - chr8_2:71459601-71459620 None:intergenic 30.0%
TTTGACATATCGATGATATG+AGG - chr8_2:71459602-71459621 None:intergenic 30.0%
!! TGATATAGCTTTTGAGAACA+AGG + chr8_2:71459710-71459729 Msa1266600:CDS 30.0%
!! TATAGAGAGTGTGACATTTT+TGG + chr8_2:71459852-71459871 Msa1266600:CDS 30.0%
!! ATAGAGAGTGTGACATTTTT+GGG + chr8_2:71459853-71459872 Msa1266600:CDS 30.0%
GGGACAATAGATTACATATT+TGG + chr8_2:71459873-71459892 Msa1266600:CDS 30.0%
! TAGCTAAAATCGAACAGTTT+TGG - chr8_2:71460019-71460038 None:intergenic 30.0%
TATGGTGAGTTTGCAAATTA+TGG + chr8_2:71460206-71460225 Msa1266600:CDS 30.0%
! ATGGTTAGGGTATCATTTAA+TGG + chr8_2:71460259-71460278 Msa1266600:CDS 30.0%
!! AGTTTATTATTGGTGATGCT+TGG + chr8_2:71460315-71460334 Msa1266600:CDS 30.0%
! ACTTCTTTTCCTTATGATGA+TGG + chr8_2:71460347-71460366 Msa1266600:CDS 30.0%
! CTTCTTTTCCTTATGATGAT+GGG + chr8_2:71460348-71460367 Msa1266600:CDS 30.0%
ATGAATTGAAGCAAACTTCA+GGG - chr8_2:71458537-71458556 None:intergenic 30.0%
AGAAGGATGTTAATGATGTT+TGG - chr8_2:71458589-71458608 None:intergenic 30.0%
TTCAGATATTGATACTTGGA+GGG - chr8_2:71458617-71458636 None:intergenic 30.0%
TTTCAGATATTGATACTTGG+AGG - chr8_2:71458618-71458637 None:intergenic 30.0%
TGGTTTCAGATATTGATACT+TGG - chr8_2:71458621-71458640 None:intergenic 30.0%
! GAATTGATTAGATAGCTTTG+TGG - chr8_2:71458641-71458660 None:intergenic 30.0%
AACATCATAGAGAACAAAAG+AGG + chr8_2:71458676-71458695 Msa1266600:CDS 30.0%
TTCTAAACATGTGTTCTTGT+TGG - chr8_2:71458830-71458849 None:intergenic 30.0%
AAAGTCAATGGCTTCATTAA+TGG - chr8_2:71459097-71459116 None:intergenic 30.0%
ATCACCAAGTAGAACAATAT+TGG - chr8_2:71459205-71459224 None:intergenic 30.0%
! AATATTGTTCTACTTGGTGA+TGG + chr8_2:71459204-71459223 Msa1266600:CDS 30.0%
TGAGTCAATTGACTAAATGT+TGG + chr8_2:71459413-71459432 Msa1266600:intron 30.0%
!!! TTTTGGTTTCTTAGAAATCC+TGG + chr8_2:71459496-71459515 Msa1266600:intron 30.0%
CTCAATTGTGAGAATAACAA+CGG - chr8_2:71459530-71459549 None:intergenic 30.0%
TTGACATATCGATGATATGA+GGG - chr8_2:71459601-71459620 None:intergenic 30.0%
TTTGACATATCGATGATATG+AGG - chr8_2:71459602-71459621 None:intergenic 30.0%
!! TGATATAGCTTTTGAGAACA+AGG + chr8_2:71459710-71459729 Msa1266600:CDS 30.0%
!! TATAGAGAGTGTGACATTTT+TGG + chr8_2:71459852-71459871 Msa1266600:CDS 30.0%
!! ATAGAGAGTGTGACATTTTT+GGG + chr8_2:71459853-71459872 Msa1266600:CDS 30.0%
GGGACAATAGATTACATATT+TGG + chr8_2:71459873-71459892 Msa1266600:CDS 30.0%
! TAGCTAAAATCGAACAGTTT+TGG - chr8_2:71460019-71460038 None:intergenic 30.0%
TATGGTGAGTTTGCAAATTA+TGG + chr8_2:71460206-71460225 Msa1266600:CDS 30.0%
! ATGGTTAGGGTATCATTTAA+TGG + chr8_2:71460259-71460278 Msa1266600:CDS 30.0%
!! AGTTTATTATTGGTGATGCT+TGG + chr8_2:71460315-71460334 Msa1266600:CDS 30.0%
! ACTTCTTTTCCTTATGATGA+TGG + chr8_2:71460347-71460366 Msa1266600:CDS 30.0%
! CTTCTTTTCCTTATGATGAT+GGG + chr8_2:71460348-71460367 Msa1266600:CDS 30.0%
TGAAAGCTAAAGTGTGTGAA+TGG - chr8_2:71458438-71458457 None:intergenic 35.0%
! TTTTGCATGCAATGTTGTTG+TGG - chr8_2:71458476-71458495 None:intergenic 35.0%
GATGAATTGAAGCAAACTTC+AGG - chr8_2:71458538-71458557 None:intergenic 35.0%
! ACATGTGTTCTTGTTGGTAA+GGG - chr8_2:71458824-71458843 None:intergenic 35.0%
AACATGTGTTCTTGTTGGTA+AGG - chr8_2:71458825-71458844 None:intergenic 35.0%
!! GTTTAATGGATTCTCTCATG+TGG + chr8_2:71458986-71459005 Msa1266600:CDS 35.0%
! GTTATTTGGAGCAAAGTCAA+TGG - chr8_2:71459109-71459128 None:intergenic 35.0%
ATCCTAGCATAGCTGTTATT+TGG - chr8_2:71459123-71459142 None:intergenic 35.0%
TCCATCAACATCACTTCTAT+TGG - chr8_2:71459253-71459272 None:intergenic 35.0%
! ATAGAAGTGATGTTGATGGA+TGG + chr8_2:71459253-71459272 Msa1266600:CDS 35.0%
AGTTGAAATTCATGTGTCAC+CGG + chr8_2:71459367-71459386 Msa1266600:intron 35.0%
AGTGAACATAAAGTGTGTCT+TGG - chr8_2:71459818-71459837 None:intergenic 35.0%
!! AAATGCAGCAGTAGTTTTAC+AGG + chr8_2:71459896-71459915 Msa1266600:CDS 35.0%
!! ACAGTGTATTGGTTAGGTAA+TGG - chr8_2:71459945-71459964 None:intergenic 35.0%
AACAACATGAAGAGTTACCT+TGG + chr8_2:71460062-71460081 Msa1266600:CDS 35.0%
TGATGTGTTCATTGATCCAA+TGG + chr8_2:71460133-71460152 Msa1266600:CDS 35.0%
GATGTGTTCATTGATCCAAT+GGG + chr8_2:71460134-71460153 Msa1266600:CDS 35.0%
! TGGTCTTCTGATGATGATAA+AGG + chr8_2:71460167-71460186 Msa1266600:CDS 35.0%
! GGTCTTCTGATGATGATAAA+GGG + chr8_2:71460168-71460187 Msa1266600:CDS 35.0%
! TTCTGATGATGATAAAGGGT+TGG + chr8_2:71460172-71460191 Msa1266600:CDS 35.0%
ATAACCGAGTGAAATGGTTA+GGG + chr8_2:71460246-71460265 Msa1266600:CDS 35.0%
!! ATTATTGGTGATGCTTGGAT+TGG + chr8_2:71460320-71460339 Msa1266600:CDS 35.0%
TGAAAGCTAAAGTGTGTGAA+TGG - chr8_2:71458438-71458457 None:intergenic 35.0%
! TTTTGCATGCAATGTTGTTG+TGG - chr8_2:71458476-71458495 None:intergenic 35.0%
GATGAATTGAAGCAAACTTC+AGG - chr8_2:71458538-71458557 None:intergenic 35.0%
! ACATGTGTTCTTGTTGGTAA+GGG - chr8_2:71458824-71458843 None:intergenic 35.0%
AACATGTGTTCTTGTTGGTA+AGG - chr8_2:71458825-71458844 None:intergenic 35.0%
!! GTTTAATGGATTCTCTCATG+TGG + chr8_2:71458986-71459005 Msa1266600:CDS 35.0%
! GTTATTTGGAGCAAAGTCAA+TGG - chr8_2:71459109-71459128 None:intergenic 35.0%
ATCCTAGCATAGCTGTTATT+TGG - chr8_2:71459123-71459142 None:intergenic 35.0%
TCCATCAACATCACTTCTAT+TGG - chr8_2:71459253-71459272 None:intergenic 35.0%
! ATAGAAGTGATGTTGATGGA+TGG + chr8_2:71459253-71459272 Msa1266600:CDS 35.0%
AGTTGAAATTCATGTGTCAC+CGG + chr8_2:71459367-71459386 Msa1266600:intron 35.0%
AGTGAACATAAAGTGTGTCT+TGG - chr8_2:71459818-71459837 None:intergenic 35.0%
!! AAATGCAGCAGTAGTTTTAC+AGG + chr8_2:71459896-71459915 Msa1266600:CDS 35.0%
!! ACAGTGTATTGGTTAGGTAA+TGG - chr8_2:71459945-71459964 None:intergenic 35.0%
AACAACATGAAGAGTTACCT+TGG + chr8_2:71460062-71460081 Msa1266600:CDS 35.0%
TGATGTGTTCATTGATCCAA+TGG + chr8_2:71460133-71460152 Msa1266600:CDS 35.0%
GATGTGTTCATTGATCCAAT+GGG + chr8_2:71460134-71460153 Msa1266600:CDS 35.0%
! TGGTCTTCTGATGATGATAA+AGG + chr8_2:71460167-71460186 Msa1266600:CDS 35.0%
! GGTCTTCTGATGATGATAAA+GGG + chr8_2:71460168-71460187 Msa1266600:CDS 35.0%
! TTCTGATGATGATAAAGGGT+TGG + chr8_2:71460172-71460191 Msa1266600:CDS 35.0%
ATAACCGAGTGAAATGGTTA+GGG + chr8_2:71460246-71460265 Msa1266600:CDS 35.0%
!! ATTATTGGTGATGCTTGGAT+TGG + chr8_2:71460320-71460339 Msa1266600:CDS 35.0%
CAATGTTGTTGTGGAAGAAG+TGG - chr8_2:71458467-71458486 None:intergenic 40.0%
TTGAAGCAAACTTCAGGGTA+TGG - chr8_2:71458532-71458551 None:intergenic 40.0%
ATACTTGGAGGGAATGAAGA+AGG - chr8_2:71458606-71458625 None:intergenic 40.0%
GAAAGCTTAGATTCTGCTTC+AGG + chr8_2:71458847-71458866 Msa1266600:CDS 40.0%
! GTAAGAGCTTCTAAAGGACA+TGG + chr8_2:71458955-71458974 Msa1266600:CDS 40.0%
! CTTCTAAAGGACATGGAAAC+CGG + chr8_2:71458962-71458981 Msa1266600:CDS 40.0%
TGAGAGAATCCATTAAACGC+CGG - chr8_2:71458984-71459003 None:intergenic 40.0%
TGTCAAGCAAAAATCATCGC+AGG + chr8_2:71459010-71459029 Msa1266600:CDS 40.0%
AGCCACAACAATCACATTGT+CGG - chr8_2:71459049-71459068 None:intergenic 40.0%
CTCCAAATAACAGCTATGCT+AGG + chr8_2:71459118-71459137 Msa1266600:CDS 40.0%
TGTGAAAGAAGGGATATACG+AGG + chr8_2:71459152-71459171 Msa1266600:CDS 40.0%
GCCAATAGAAGTGATGTTGA+TGG + chr8_2:71459249-71459268 Msa1266600:CDS 40.0%
TAAAGTTGCAGATCTGAAGG+TGG - chr8_2:71459280-71459299 None:intergenic 40.0%
ACCTTCAGATCTGCAACTTT+AGG + chr8_2:71459279-71459298 Msa1266600:CDS 40.0%
ACCTAAAGTTGCAGATCTGA+AGG - chr8_2:71459283-71459302 None:intergenic 40.0%
! CTAACGAATAAAGGACTAGC+CGG - chr8_2:71459389-71459408 None:intergenic 40.0%
!!! TTTTTTCTGTCAGCGGTTTC+TGG + chr8_2:71459669-71459688 Msa1266600:intron 40.0%
!! ATAGCTTTTGAGAACAAGGC+AGG + chr8_2:71459714-71459733 Msa1266600:CDS 40.0%
!! GTGATGACAGTGTATTGGTT+AGG - chr8_2:71459951-71459970 None:intergenic 40.0%
ACATGAAGAGTTACCTTGGA+AGG + chr8_2:71460066-71460085 Msa1266600:CDS 40.0%
TGTTCATTGATCCAATGGGA+TGG + chr8_2:71460138-71460157 Msa1266600:CDS 40.0%
GGGTTGGACACTTTGTATTA+TGG + chr8_2:71460188-71460207 Msa1266600:CDS 40.0%
GAGTTTGCAAATTATGGACC+TGG + chr8_2:71460212-71460231 Msa1266600:CDS 40.0%
! CAAATTATGGACCTGGTTCT+GGG + chr8_2:71460219-71460238 Msa1266600:CDS 40.0%
GATAACCGAGTGAAATGGTT+AGG + chr8_2:71460245-71460264 Msa1266600:CDS 40.0%
GATACCCTAACCATTTCACT+CGG - chr8_2:71460253-71460272 None:intergenic 40.0%
CAATGTTGTTGTGGAAGAAG+TGG - chr8_2:71458467-71458486 None:intergenic 40.0%
TTGAAGCAAACTTCAGGGTA+TGG - chr8_2:71458532-71458551 None:intergenic 40.0%
ATACTTGGAGGGAATGAAGA+AGG - chr8_2:71458606-71458625 None:intergenic 40.0%
GAAAGCTTAGATTCTGCTTC+AGG + chr8_2:71458847-71458866 Msa1266600:CDS 40.0%
! GTAAGAGCTTCTAAAGGACA+TGG + chr8_2:71458955-71458974 Msa1266600:CDS 40.0%
! CTTCTAAAGGACATGGAAAC+CGG + chr8_2:71458962-71458981 Msa1266600:CDS 40.0%
TGAGAGAATCCATTAAACGC+CGG - chr8_2:71458984-71459003 None:intergenic 40.0%
TGTCAAGCAAAAATCATCGC+AGG + chr8_2:71459010-71459029 Msa1266600:CDS 40.0%
AGCCACAACAATCACATTGT+CGG - chr8_2:71459049-71459068 None:intergenic 40.0%
CTCCAAATAACAGCTATGCT+AGG + chr8_2:71459118-71459137 Msa1266600:CDS 40.0%
TGTGAAAGAAGGGATATACG+AGG + chr8_2:71459152-71459171 Msa1266600:CDS 40.0%
GCCAATAGAAGTGATGTTGA+TGG + chr8_2:71459249-71459268 Msa1266600:CDS 40.0%
TAAAGTTGCAGATCTGAAGG+TGG - chr8_2:71459280-71459299 None:intergenic 40.0%
ACCTTCAGATCTGCAACTTT+AGG + chr8_2:71459279-71459298 Msa1266600:CDS 40.0%
ACCTAAAGTTGCAGATCTGA+AGG - chr8_2:71459283-71459302 None:intergenic 40.0%
! CTAACGAATAAAGGACTAGC+CGG - chr8_2:71459389-71459408 None:intergenic 40.0%
!!! TTTTTTCTGTCAGCGGTTTC+TGG + chr8_2:71459669-71459688 Msa1266600:intron 40.0%
!! ATAGCTTTTGAGAACAAGGC+AGG + chr8_2:71459714-71459733 Msa1266600:CDS 40.0%
!! GTGATGACAGTGTATTGGTT+AGG - chr8_2:71459951-71459970 None:intergenic 40.0%
ACATGAAGAGTTACCTTGGA+AGG + chr8_2:71460066-71460085 Msa1266600:CDS 40.0%
TGTTCATTGATCCAATGGGA+TGG + chr8_2:71460138-71460157 Msa1266600:CDS 40.0%
GGGTTGGACACTTTGTATTA+TGG + chr8_2:71460188-71460207 Msa1266600:CDS 40.0%
GAGTTTGCAAATTATGGACC+TGG + chr8_2:71460212-71460231 Msa1266600:CDS 40.0%
! CAAATTATGGACCTGGTTCT+GGG + chr8_2:71460219-71460238 Msa1266600:CDS 40.0%
GATAACCGAGTGAAATGGTT+AGG + chr8_2:71460245-71460264 Msa1266600:CDS 40.0%
GATACCCTAACCATTTCACT+CGG - chr8_2:71460253-71460272 None:intergenic 40.0%
! GTATGGAGTAGTTCTGCAGA+AGG - chr8_2:71458515-71458534 None:intergenic 45.0%
GTCAATGTTTCCTAAGCCTG+AGG + chr8_2:71458933-71458952 Msa1266600:CDS 45.0%
! CCTTTAGAAGCTCTTACCTC+AGG - chr8_2:71458952-71458971 None:intergenic 45.0%
CCTGAGGTAAGAGCTTCTAA+AGG + chr8_2:71458949-71458968 Msa1266600:CDS 45.0%
ACATGGAAACCGGCGTTTAA+TGG + chr8_2:71458972-71458991 Msa1266600:CDS 45.0%
CACCGACAATGTGATTGTTG+TGG + chr8_2:71459044-71459063 Msa1266600:CDS 45.0%
! ATAACAACGGACTTCTGACC+AGG - chr8_2:71459517-71459536 None:intergenic 45.0%
!!! GGTTTCTGGTGAAGGTTTTC+TGG + chr8_2:71459683-71459702 Msa1266600:CDS 45.0%
GTGCAGTGATGACAGTGTAT+TGG - chr8_2:71459956-71459975 None:intergenic 45.0%
GATTCACCTGATGAAGACAC+TGG + chr8_2:71459984-71460003 Msa1266600:CDS 45.0%
GAAATGCCAGTGTCTTCATC+AGG - chr8_2:71459993-71460012 None:intergenic 45.0%
GTCCTAGAATAAACCCTCCA+AGG - chr8_2:71460092-71460111 None:intergenic 45.0%
!! ATCCAATGGGATGGACTAAG+TGG + chr8_2:71460147-71460166 Msa1266600:CDS 45.0%
GCAAATTATGGACCTGGTTC+TGG + chr8_2:71460218-71460237 Msa1266600:CDS 45.0%
! GTATGGAGTAGTTCTGCAGA+AGG - chr8_2:71458515-71458534 None:intergenic 45.0%
GTCAATGTTTCCTAAGCCTG+AGG + chr8_2:71458933-71458952 Msa1266600:CDS 45.0%
! CCTTTAGAAGCTCTTACCTC+AGG - chr8_2:71458952-71458971 None:intergenic 45.0%
CCTGAGGTAAGAGCTTCTAA+AGG + chr8_2:71458949-71458968 Msa1266600:CDS 45.0%
ACATGGAAACCGGCGTTTAA+TGG + chr8_2:71458972-71458991 Msa1266600:CDS 45.0%
CACCGACAATGTGATTGTTG+TGG + chr8_2:71459044-71459063 Msa1266600:CDS 45.0%
! ATAACAACGGACTTCTGACC+AGG - chr8_2:71459517-71459536 None:intergenic 45.0%
!!! GGTTTCTGGTGAAGGTTTTC+TGG + chr8_2:71459683-71459702 Msa1266600:CDS 45.0%
GTGCAGTGATGACAGTGTAT+TGG - chr8_2:71459956-71459975 None:intergenic 45.0%
GATTCACCTGATGAAGACAC+TGG + chr8_2:71459984-71460003 Msa1266600:CDS 45.0%
GAAATGCCAGTGTCTTCATC+AGG - chr8_2:71459993-71460012 None:intergenic 45.0%
GTCCTAGAATAAACCCTCCA+AGG - chr8_2:71460092-71460111 None:intergenic 45.0%
!! ATCCAATGGGATGGACTAAG+TGG + chr8_2:71460147-71460166 Msa1266600:CDS 45.0%
GCAAATTATGGACCTGGTTC+TGG + chr8_2:71460218-71460237 Msa1266600:CDS 45.0%
GAAGCTCTTACCTCAGGCTT+AGG - chr8_2:71458946-71458965 None:intergenic 50.0%
GTGATTGTTGTGGCTGCAGA+TGG + chr8_2:71459054-71459073 Msa1266600:CDS 50.0%
GCAACTGCTTGATGCTTCTC+TGG - chr8_2:71459741-71459760 None:intergenic 50.0%
AGAGTTACCTTGGAAGGCCT+TGG + chr8_2:71460072-71460091 Msa1266600:CDS 50.0%
TTACCTTGGAAGGCCTTGGA+GGG + chr8_2:71460076-71460095 Msa1266600:CDS 50.0%
GGCCTTGGAGGGTTTATTCT+AGG + chr8_2:71460087-71460106 Msa1266600:CDS 50.0%
GACCACTTAGTCCATCCCAT+TGG - chr8_2:71460152-71460171 None:intergenic 50.0%
!! TTATGGACCTGGTTCTGGGA+CGG + chr8_2:71460223-71460242 Msa1266600:CDS 50.0%
GGACGGATAACCGAGTGAAA+TGG + chr8_2:71460240-71460259 Msa1266600:CDS 50.0%
GAAGCTCTTACCTCAGGCTT+AGG - chr8_2:71458946-71458965 None:intergenic 50.0%
GTGATTGTTGTGGCTGCAGA+TGG + chr8_2:71459054-71459073 Msa1266600:CDS 50.0%
GCAACTGCTTGATGCTTCTC+TGG - chr8_2:71459741-71459760 None:intergenic 50.0%
AGAGTTACCTTGGAAGGCCT+TGG + chr8_2:71460072-71460091 Msa1266600:CDS 50.0%
TTACCTTGGAAGGCCTTGGA+GGG + chr8_2:71460076-71460095 Msa1266600:CDS 50.0%
GGCCTTGGAGGGTTTATTCT+AGG + chr8_2:71460087-71460106 Msa1266600:CDS 50.0%
GACCACTTAGTCCATCCCAT+TGG - chr8_2:71460152-71460171 None:intergenic 50.0%
!! TTATGGACCTGGTTCTGGGA+CGG + chr8_2:71460223-71460242 Msa1266600:CDS 50.0%
GGACGGATAACCGAGTGAAA+TGG + chr8_2:71460240-71460259 Msa1266600:CDS 50.0%
GTTGTGGCTGCAGATGGAAC+TGG + chr8_2:71459060-71459079 Msa1266600:CDS 55.0%
!! CTGTCAGCGGTTTCTGGTGA+AGG + chr8_2:71459675-71459694 Msa1266600:intron 55.0%
GTTACCTTGGAAGGCCTTGG+AGG + chr8_2:71460075-71460094 Msa1266600:CDS 55.0%
AAACCCTCCAAGGCCTTCCA+AGG - chr8_2:71460082-71460101 None:intergenic 55.0%
GTTGTGGCTGCAGATGGAAC+TGG + chr8_2:71459060-71459079 Msa1266600:CDS 55.0%
!! CTGTCAGCGGTTTCTGGTGA+AGG + chr8_2:71459675-71459694 Msa1266600:intron 55.0%
GTTACCTTGGAAGGCCTTGG+AGG + chr8_2:71460075-71460094 Msa1266600:CDS 55.0%
AAACCCTCCAAGGCCTTCCA+AGG - chr8_2:71460082-71460101 None:intergenic 55.0%
CGGTTATCCGTCCCAGAACC+AGG - chr8_2:71460233-71460252 None:intergenic 60.0%
CGGTTATCCGTCCCAGAACC+AGG - chr8_2:71460233-71460252 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 71458388 71460376 71458388 ID=Msa1266600;Name=Msa1266600
chr8_2 mRNA 71458388 71460376 71458388 ID=Msa1266600-mRNA-1;Parent=Msa1266600;Name=Msa1266600-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|1|1|2|0|535
chr8_2 exon 71458388 71459300 71458388 ID=Msa1266600-mRNA-1:exon:23969;Parent=Msa1266600-mRNA-1
chr8_2 exon 71459682 71460376 71459682 ID=Msa1266600-mRNA-1:exon:23970;Parent=Msa1266600-mRNA-1
chr8_2 CDS 71458388 71459300 71458388 ID=Msa1266600-mRNA-1:cds;Parent=Msa1266600-mRNA-1
chr8_2 CDS 71459682 71460376 71459682 ID=Msa1266600-mRNA-1:cds;Parent=Msa1266600-mRNA-1
Gene Sequence

>Msa1266600

ATGGCTAATTTATCTTCTAAACTCTTTCTTCTTCTCTTAACAATCTTCCATTCACACACTTTAGCTTTCAACAACACCACTTCTTCCACAACAACATTGCATGCAAAAATCTCTTCAATAAAATCCTTCTGCAGAACTACTCCATACCCTGAAGTTTGCTTCAATTCATCAAAGCTATCAATCTCAATAAACATAAATCCAAACATCATTAACATCCTTCTTCATTCCCTCCAAGTATCAATATCTGAAACCACAAAGCTATCTAATCAATTCAACAATGCTCACTCAAACATCATAGAGAACAAAAGAGGAGCTATACAAGATTGCAAAGAACTTCAACAGTCTACCTTATCTTCACTAAAAAGATCATTATCTGGAATTCATTCATCAAAATATAGAAAGTTAGTTGATGCAAGAACTTATCTCAGTGCAGCCCTTACCAACAAGAACACATGTTTAGAAAGCTTAGATTCTGCTTCAGGTACAATGAAGCAAGTTTTAGTTGATTCAGTGATCAACACTTACAAGCATGTTAGTAATTCTCTGTCAATGTTTCCTAAGCCTGAGGTAAGAGCTTCTAAAGGACATGGAAACCGGCGTTTAATGGATTCTCTCATGTGGTTGTCAAGCAAAAATCATCGCAGGTTCTTACAAAGCACCGACAATGTGATTGTTGTGGCTGCAGATGGAACTGGAAACTTTAGCACCATTAATGAAGCCATTGACTTTGCTCCAAATAACAGCTATGCTAGGATAATAATCTATGTGAAAGAAGGGATATACGAGGAAAATGTTGAAATCTCAAGCAATAAAACCAATATTGTTCTACTTGGTGATGGAAGTGATCTCACTGTCATTACTGCCAATAGAAGTGATGTTGATGGATGGACCACCTTCAGATCTGCAACTTTAGCGGTTTCTGGTGAAGGTTTTCTGGCACGTGATATAGCTTTTGAGAACAAGGCAGGACCAGAGAAGCATCAAGCAGTTGCATTAAGAGTGAATGCAGACATAACAGCTTTTTACAAATGTGCAATGTATGGTTACCAAGACACACTTTATGTTCACTCATTTAGACAATTCTATAGAGAGTGTGACATTTTTGGGACAATAGATTACATATTTGGAAATGCAGCAGTAGTTTTACAGGCATGTAACATTATATCAAGAATGCCATTACCTAACCAATACACTGTCATCACTGCACAGTCAAGAGATTCACCTGATGAAGACACTGGCATTTCAATCCAAAACTGTTCGATTTTAGCTACTACTGATTTGTATAACAACTTTAACAACATGAAGAGTTACCTTGGAAGGCCTTGGAGGGTTTATTCTAGGACTGTTTTCATTGAATCTTACATTGATGTGTTCATTGATCCAATGGGATGGACTAAGTGGTCTTCTGATGATGATAAAGGGTTGGACACTTTGTATTATGGTGAGTTTGCAAATTATGGACCTGGTTCTGGGACGGATAACCGAGTGAAATGGTTAGGGTATCATTTAATGGATTTTGATAGTGCAAATAATTTCACTGTTTCAGAGTTTATTATTGGTGATGCTTGGATTGGTTCTACTTCTTTTCCTTATGATGATGGGATTTGA
Protein sequence

>Msa1266600

MANLSSKLFLLLLTIFHSHTLAFNNTTSSTTTLHAKISSIKSFCRTTPYPEVCFNSSKLSISININPNIINILLHSLQVSISETTKLSNQFNNAHSNIIENKRGAIQDCKELQQSTLSSLKRSLSGIHSSKYRKLVDARTYLSAALTNKNTCLESLDSASGTMKQVLVDSVINTYKHVSNSLSMFPKPEVRASKGHGNRRLMDSLMWLSSKNHRRFLQSTDNVIVVAADGTGNFSTINEAIDFAPNNSYARIIIYVKEGIYEENVEISSNKTNIVLLGDGSDLTVITANRSDVDGWTTFRSATLAVSGEGFLARDIAFENKAGPEKHQAVALRVNADITAFYKCAMYGYQDTLYVHSFRQFYRECDIFGTIDYIFGNAAVVLQACNIISRMPLPNQYTVITAQSRDSPDEDTGISIQNCSILATTDLYNNFNNMKSYLGRPWRVYSRTVFIESYIDVFIDPMGWTKWSSDDDKGLDTLYYGEFANYGPGSGTDNRVKWLGYHLMDFDSANNFTVSEFIIGDAWIGSTSFPYDDGI*