Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303880 | XP_003609980.3 | 90.870 | 460 | 6 | 2 | 1 | 424 | 34 | 493 | 0.0 | 844 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303880 | sp|A7PZL3|PGLR_VITVI | 43.317 | 404 | 191 | 5 | 43 | 409 | 64 | 466 | 1.03e-107 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303880 | A0A396IG09 | 90.870 | 460 | 6 | 2 | 1 | 424 | 34 | 493 | 0.0 | 844 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0108630 | Msa1303880 | 0.811555 | 6.601929e-51 | -8.615850e-47 |
| Msa0689660 | Msa1303880 | 0.899978 | 1.159738e-77 | -8.615850e-47 |
| Msa0752780 | Msa1303880 | 0.872990 | 2.079547e-67 | -8.615850e-47 |
| Msa0811690 | Msa1303880 | 0.801214 | 1.000758e-48 | -8.615850e-47 |
| Msa1301980 | Msa1303880 | 0.827742 | 1.322135e-54 | -8.615850e-47 |
| Msa1302000 | Msa1303880 | 0.820673 | 6.056150e-53 | -8.615850e-47 |
| Msa1303880 | Msa1333500 | 0.800589 | 1.342667e-48 | -8.615850e-47 |
| Msa1303880 | Msa1349690 | 0.866731 | 2.301625e-65 | -8.615850e-47 |
| Msa1303880 | Msa1358290 | 0.842856 | 2.002241e-58 | -8.615850e-47 |
| Msa1303880 | Msa1363010 | 0.910159 | 2.557564e-82 | -8.615850e-47 |
| Msa1303880 | Msa1392740 | 0.859980 | 2.840999e-63 | -8.615850e-47 |
| Msa1104110 | Msa1303880 | 0.811199 | 7.890701e-51 | -8.615850e-47 |
| Msa1147700 | Msa1303880 | 0.811105 | 8.266527e-51 | -8.615850e-47 |
| Msa1216090 | Msa1303880 | 0.854439 | 1.229776e-61 | -8.615850e-47 |
| Msa1216340 | Msa1303880 | 0.842727 | 2.167708e-58 | -8.615850e-47 |
| Msa1219930 | Msa1303880 | 0.898300 | 6.072467e-77 | -8.615850e-47 |
| Msa0521510 | Msa1303880 | 0.806450 | 8.177411e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303880 | MtrunA17_Chr4g0070281 | 90.870 | 460 | 6 | 2 | 1 | 424 | 34 | 493 | 0.0 | 844 |
| Msa1303880 | MtrunA17_Chr2g0301091 | 75.328 | 458 | 75 | 4 | 3 | 423 | 17 | 473 | 0.0 | 694 |
| Msa1303880 | MtrunA17_Chr7g0270821 | 44.104 | 424 | 193 | 5 | 34 | 416 | 35 | 455 | 2.95e-117 | 350 |
| Msa1303880 | MtrunA17_Chr8g0387391 | 43.073 | 397 | 189 | 5 | 36 | 396 | 38 | 433 | 3.58e-113 | 340 |
| Msa1303880 | MtrunA17_Chr1g0193961 | 44.089 | 406 | 182 | 6 | 34 | 401 | 35 | 433 | 1.39e-111 | 336 |
| Msa1303880 | MtrunA17_Chr1g0202651 | 43.367 | 392 | 185 | 4 | 44 | 399 | 57 | 447 | 6.72e-108 | 327 |
| Msa1303880 | MtrunA17_Chr7g0248451 | 43.003 | 393 | 187 | 5 | 43 | 399 | 56 | 447 | 1.04e-107 | 326 |
| Msa1303880 | MtrunA17_Chr7g0255311 | 44.332 | 397 | 181 | 6 | 44 | 401 | 65 | 460 | 6.33e-104 | 317 |
| Msa1303880 | MtrunA17_Chr2g0295241 | 38.741 | 413 | 214 | 5 | 25 | 399 | 17 | 428 | 1.82e-103 | 314 |
| Msa1303880 | MtrunA17_Chr3g0130251 | 42.788 | 416 | 185 | 8 | 26 | 401 | 66 | 468 | 1.33e-101 | 310 |
| Msa1303880 | MtrunA17_Chr4g0067811 | 39.109 | 404 | 210 | 3 | 32 | 400 | 30 | 432 | 3.45e-101 | 308 |
| Msa1303880 | MtrunA17_Chr1g0202641 | 43.367 | 392 | 185 | 5 | 44 | 399 | 557 | 947 | 4.28e-100 | 320 |
| Msa1303880 | MtrunA17_Chr1g0202641 | 41.878 | 394 | 192 | 5 | 44 | 401 | 57 | 449 | 2.49e-97 | 312 |
| Msa1303880 | MtrunA17_Chr3g0095221 | 41.608 | 423 | 203 | 8 | 27 | 412 | 36 | 451 | 1.73e-99 | 304 |
| Msa1303880 | MtrunA17_Chr8g0348491 | 39.192 | 421 | 209 | 7 | 38 | 422 | 51 | 460 | 3.19e-99 | 304 |
| Msa1303880 | MtrunA17_Chr1g0202621 | 41.192 | 386 | 196 | 4 | 44 | 399 | 50 | 434 | 7.70e-99 | 303 |
| Msa1303880 | MtrunA17_Chr5g0442221 | 43.424 | 403 | 187 | 6 | 36 | 399 | 38 | 438 | 1.76e-95 | 294 |
| Msa1303880 | MtrunA17_Chr2g0319881 | 48.299 | 147 | 65 | 2 | 34 | 170 | 35 | 180 | 2.02e-38 | 137 |
| Msa1303880 | MtrunA17_Chr2g0301101 | 45.205 | 146 | 26 | 4 | 3 | 146 | 29 | 122 | 3.26e-25 | 100 |
| Msa1303880 | MtrunA17_Chr6g0449961 | 24.623 | 398 | 245 | 12 | 36 | 403 | 39 | 411 | 2.89e-22 | 98.2 |
| Msa1303880 | MtrunA17_Chr6g0468871 | 52.055 | 73 | 35 | 0 | 199 | 271 | 21 | 93 | 1.52e-19 | 83.2 |
| Msa1303880 | MtrunA17_Chr5g0413141 | 22.172 | 442 | 272 | 13 | 1 | 394 | 13 | 430 | 5.59e-19 | 89.0 |
| Msa1303880 | MtrunA17_Chr7g0270361 | 24.586 | 362 | 227 | 15 | 41 | 368 | 66 | 415 | 5.14e-17 | 82.8 |
| Msa1303880 | MtrunA17_Chr8g0365901 | 23.284 | 408 | 245 | 16 | 40 | 407 | 63 | 442 | 7.23e-17 | 82.4 |
| Msa1303880 | MtrunA17_Chr5g0418411 | 25.439 | 342 | 190 | 13 | 42 | 345 | 29 | 343 | 8.87e-17 | 81.6 |
| Msa1303880 | MtrunA17_Chr1g0194231 | 25.613 | 367 | 218 | 16 | 41 | 368 | 80 | 430 | 2.46e-16 | 80.9 |
| Msa1303880 | MtrunA17_Chr1g0173451 | 22.683 | 410 | 251 | 15 | 41 | 414 | 75 | 454 | 2.25e-14 | 74.7 |
| Msa1303880 | MtrunA17_Chr4g0052621 | 23.989 | 371 | 219 | 14 | 40 | 368 | 63 | 412 | 1.23e-13 | 72.4 |
| Msa1303880 | MtrunA17_Chr3g0089021 | 22.518 | 413 | 248 | 13 | 23 | 393 | 52 | 434 | 2.09e-12 | 68.6 |
| Msa1303880 | MtrunA17_Chr3g0100091 | 23.322 | 283 | 165 | 8 | 139 | 391 | 80 | 340 | 4.39e-12 | 67.0 |
| Msa1303880 | MtrunA17_Chr8g0337581 | 24.156 | 385 | 234 | 14 | 40 | 394 | 29 | 385 | 7.67e-12 | 66.6 |
| Msa1303880 | MtrunA17_Chr2g0332801 | 22.943 | 401 | 232 | 15 | 42 | 396 | 59 | 428 | 3.50e-11 | 64.7 |
| Msa1303880 | MtrunA17_Chr2g0293681 | 25.562 | 356 | 208 | 11 | 30 | 347 | 55 | 391 | 5.31e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303880 | AT1G19170.1 | 69.723 | 469 | 94 | 5 | 3 | 423 | 37 | 505 | 0.0 | 665 |
| Msa1303880 | AT3G42950.1 | 67.804 | 469 | 104 | 4 | 2 | 423 | 15 | 483 | 0.0 | 653 |
| Msa1303880 | AT3G48950.1 | 42.410 | 415 | 201 | 5 | 44 | 421 | 47 | 460 | 5.15e-111 | 335 |
| Msa1303880 | AT3G62110.1 | 43.523 | 386 | 178 | 4 | 38 | 385 | 39 | 422 | 8.37e-107 | 324 |
| Msa1303880 | AT3G62110.2 | 43.523 | 386 | 178 | 4 | 38 | 385 | 39 | 422 | 8.37e-107 | 324 |
| Msa1303880 | AT3G61490.2 | 40.288 | 417 | 210 | 6 | 43 | 423 | 46 | 459 | 1.54e-103 | 315 |
| Msa1303880 | AT3G61490.3 | 40.288 | 417 | 210 | 6 | 43 | 423 | 46 | 459 | 1.54e-103 | 315 |
| Msa1303880 | AT3G61490.1 | 40.288 | 417 | 210 | 6 | 43 | 423 | 46 | 459 | 1.54e-103 | 315 |
| Msa1303880 | AT3G61490.5 | 40.288 | 417 | 210 | 6 | 43 | 423 | 61 | 474 | 1.71e-103 | 316 |
| Msa1303880 | AT4G23500.1 | 42.180 | 422 | 206 | 5 | 36 | 421 | 62 | 481 | 2.55e-103 | 316 |
| Msa1303880 | AT3G61490.4 | 40.288 | 417 | 210 | 6 | 43 | 423 | 159 | 572 | 1.24e-102 | 317 |
| Msa1303880 | AT5G41870.1 | 42.752 | 407 | 194 | 7 | 36 | 406 | 39 | 442 | 3.50e-102 | 311 |
| Msa1303880 | AT2G23900.1 | 41.476 | 393 | 192 | 5 | 44 | 399 | 58 | 449 | 4.80e-102 | 312 |
| Msa1303880 | AT4G23820.1 | 40.233 | 430 | 216 | 5 | 5 | 399 | 8 | 431 | 1.83e-101 | 309 |
| Msa1303880 | AT4G33440.1 | 43.382 | 408 | 192 | 5 | 40 | 412 | 70 | 473 | 3.75e-101 | 309 |
| Msa1303880 | AT3G06770.2 | 39.702 | 403 | 199 | 5 | 38 | 401 | 39 | 436 | 6.54e-99 | 303 |
| Msa1303880 | AT3G06770.5 | 39.702 | 403 | 199 | 5 | 38 | 401 | 40 | 437 | 6.60e-99 | 303 |
| Msa1303880 | AT5G49215.2 | 37.355 | 431 | 227 | 6 | 11 | 404 | 15 | 439 | 1.38e-96 | 297 |
| Msa1303880 | AT5G49215.1 | 37.355 | 431 | 227 | 6 | 11 | 404 | 17 | 441 | 2.08e-96 | 296 |
| Msa1303880 | AT3G16850.1 | 41.310 | 397 | 195 | 4 | 38 | 399 | 36 | 429 | 3.06e-95 | 293 |
| Msa1303880 | AT3G06770.1 | 38.275 | 371 | 185 | 5 | 70 | 401 | 2 | 367 | 9.72e-87 | 269 |
| Msa1303880 | AT3G06770.3 | 38.275 | 371 | 185 | 5 | 70 | 401 | 2 | 367 | 9.72e-87 | 269 |
| Msa1303880 | AT3G06770.4 | 34.670 | 349 | 181 | 6 | 95 | 401 | 6 | 349 | 4.69e-67 | 218 |
| Msa1303880 | AT1G56710.1 | 27.628 | 409 | 224 | 17 | 36 | 396 | 42 | 426 | 4.35e-23 | 101 |
| Msa1303880 | AT3G15720.2 | 27.424 | 361 | 200 | 14 | 41 | 368 | 22 | 353 | 1.04e-20 | 94.4 |
| Msa1303880 | AT3G15720.3 | 27.747 | 364 | 198 | 15 | 41 | 368 | 22 | 356 | 1.39e-20 | 94.0 |
| Msa1303880 | AT3G15720.1 | 27.747 | 364 | 198 | 15 | 41 | 368 | 23 | 357 | 1.51e-20 | 94.0 |
| Msa1303880 | AT1G80170.1 | 24.703 | 421 | 250 | 15 | 23 | 400 | 31 | 427 | 1.14e-18 | 88.2 |
| Msa1303880 | AT5G14650.1 | 23.020 | 404 | 243 | 15 | 41 | 404 | 50 | 425 | 6.58e-18 | 85.9 |
| Msa1303880 | AT1G48100.1 | 25.464 | 377 | 206 | 15 | 40 | 368 | 78 | 427 | 3.44e-17 | 84.0 |
| Msa1303880 | AT3G26610.1 | 22.604 | 407 | 247 | 11 | 33 | 394 | 58 | 441 | 1.05e-16 | 82.4 |
| Msa1303880 | AT1G23460.1 | 22.782 | 417 | 262 | 14 | 41 | 421 | 66 | 458 | 2.87e-16 | 80.9 |
| Msa1303880 | AT1G23460.2 | 22.782 | 417 | 262 | 14 | 41 | 421 | 42 | 434 | 2.94e-16 | 80.9 |
| Msa1303880 | AT5G44840.1 | 23.485 | 396 | 233 | 13 | 41 | 396 | 23 | 388 | 5.94e-16 | 79.7 |
| Msa1303880 | AT1G02460.1 | 25.806 | 372 | 214 | 14 | 41 | 368 | 88 | 441 | 6.53e-16 | 80.1 |
| Msa1303880 | AT3G15720.4 | 29.845 | 258 | 141 | 10 | 137 | 368 | 50 | 293 | 1.17e-15 | 78.6 |
| Msa1303880 | AT5G44830.1 | 26.296 | 270 | 166 | 9 | 145 | 396 | 75 | 329 | 1.90e-15 | 77.4 |
| Msa1303880 | AT1G70500.1 | 22.821 | 390 | 242 | 13 | 41 | 394 | 66 | 432 | 3.61e-15 | 77.8 |
| Msa1303880 | AT3G57790.2 | 24.194 | 310 | 163 | 10 | 40 | 300 | 33 | 319 | 9.34e-14 | 73.6 |
| Msa1303880 | AT3G57790.1 | 24.194 | 310 | 163 | 10 | 40 | 300 | 33 | 319 | 9.34e-14 | 73.6 |
| Msa1303880 | AT1G80140.1 | 26.715 | 277 | 167 | 11 | 145 | 396 | 70 | 335 | 2.01e-13 | 71.6 |
| Msa1303880 | AT5G27530.1 | 23.760 | 383 | 247 | 13 | 23 | 386 | 42 | 398 | 6.57e-13 | 70.5 |
| Msa1303880 | AT2G43880.1 | 23.834 | 386 | 240 | 16 | 42 | 396 | 31 | 393 | 4.12e-11 | 64.7 |
Find 125 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCTGTCCTTGTCCATTTA+TGG | 0.154896 | 8_3:+67182330 | None:intergenic |
| TATGGTTGTTGGTGGGTTTA+TGG | 0.198875 | 8_3:-67184592 | Msa1303880:CDS |
| TTTGTACATGGCCGTGTAAT+AGG | 0.250601 | 8_3:-67180769 | Msa1303880:CDS |
| AAAGATGTGCTTCTTCTTGT+AGG | 0.280475 | 8_3:+67180801 | None:intergenic |
| GGGCATAATGGCACCATAAA+TGG | 0.292506 | 8_3:-67182343 | Msa1303880:CDS |
| AATCTATATCTGTTACATTC+TGG | 0.301959 | 8_3:+67180671 | None:intergenic |
| GATCAGTATGGAATTGCTTA+TGG | 0.314592 | 8_3:-67181392 | Msa1303880:CDS |
| GTTTCTGCTATATCTAAATT+CGG | 0.317289 | 8_3:-67184450 | Msa1303880:CDS |
| ATCTTCTTGTGTGGGATTCT+AGG | 0.317361 | 8_3:-67181104 | Msa1303880:CDS |
| ATATGGCTGGTAAGATTAAA+AGG | 0.322427 | 8_3:+67184375 | None:intergenic |
| TTGTATAGTTGAGACGCTTC+TGG | 0.326600 | 8_3:+67182290 | None:intergenic |
| CTCGCATGGAGATGGGAAAA+TGG | 0.361958 | 8_3:+67180744 | None:intergenic |
| ATAAGCTTCACCAGTGTCTA+TGG | 0.362272 | 8_3:-67180913 | Msa1303880:CDS |
| AAGCTTATGTCTCTTATAAC+TGG | 0.364953 | 8_3:+67180928 | None:intergenic |
| GAGCGTCCTGGGCCTCGATA+TGG | 0.368513 | 8_3:-67183157 | Msa1303880:CDS |
| TAGAGCGAACAACGAGGTTT+CGG | 0.369617 | 8_3:+67181345 | None:intergenic |
| AAACCTCGTTGTTCGCTCTA+TGG | 0.372844 | 8_3:-67181342 | Msa1303880:CDS |
| ATCTATATCTGTTACATTCT+GGG | 0.380122 | 8_3:+67180672 | None:intergenic |
| CGATATGGCAGTTTGATTCA+TGG | 0.394177 | 8_3:-67183142 | Msa1303880:intron |
| GACCAGGAGGAACATTCAAC+TGG | 0.395818 | 8_3:+67184412 | None:intergenic |
| CCATGATTGACAGGGCATAA+TGG | 0.414765 | 8_3:-67182355 | Msa1303880:intron |
| AAGAGTGGTTGGGATCAGTA+TGG | 0.421829 | 8_3:-67181404 | Msa1303880:CDS |
| TCTTGTGTGGGATTCTAGGC+GGG | 0.427041 | 8_3:-67181100 | Msa1303880:CDS |
| TTGTACATGGCCGTGTAATA+GGG | 0.427652 | 8_3:-67180768 | Msa1303880:CDS |
| ATGTGCGGCAAATAACTTAT+CGG | 0.434253 | 8_3:-67181041 | Msa1303880:CDS |
| GTAGGGTCATATCCATCATC+AGG | 0.436532 | 8_3:+67180958 | None:intergenic |
| GTTTCGGATCAATATATTCA+TGG | 0.446289 | 8_3:+67181361 | None:intergenic |
| GAAGGCAATGGAGGCATTAG+TGG | 0.446838 | 8_3:+67183196 | None:intergenic |
| ACCGGTCTCATCTTCGGAAT+CGG | 0.449026 | 8_3:+67184546 | None:intergenic |
| CTTGCTCATTGTACCGATCA+AGG | 0.450350 | 8_3:+67180719 | None:intergenic |
| TTTCTGCTATATCTAAATTC+GGG | 0.451005 | 8_3:-67184449 | Msa1303880:CDS |
| GAGCTAGAAAGAGAGTGATA+TGG | 0.460193 | 8_3:+67184358 | None:intergenic |
| TATGGATGGAGCGTCCAAAA+AGG | 0.462287 | 8_3:+67182199 | None:intergenic |
| ATCTTCGGAATCGGCCGGAC+CGG | 0.462711 | 8_3:+67184555 | None:intergenic |
| GGGTATGGAAGGGAGCGTCC+TGG | 0.464121 | 8_3:-67183169 | Msa1303880:CDS |
| ATGCCTCCATTGCCTTCGTA+TGG | 0.465957 | 8_3:-67183190 | Msa1303880:CDS |
| AAAACCACCGGTCTCATCTT+CGG | 0.472379 | 8_3:+67184540 | None:intergenic |
| CCATTGCCTTCGTATGGGTA+TGG | 0.477012 | 8_3:-67183184 | Msa1303880:CDS |
| GGTATGGAAGGGAGCGTCCT+GGG | 0.478476 | 8_3:-67183168 | Msa1303880:CDS |
| GTACAATGAGCAAGGACAAC+TGG | 0.482555 | 8_3:-67180710 | Msa1303880:CDS |
| CAATAGCAATAAAGAGTGGT+TGG | 0.485498 | 8_3:-67181415 | Msa1303880:CDS |
| TCAAGGTTCTCGCATGGAGA+TGG | 0.487309 | 8_3:+67180736 | None:intergenic |
| CGCACATATCCGCCTCGTCC+AGG | 0.489333 | 8_3:+67181057 | None:intergenic |
| TGAATGTTCCTCCTGGTCGT+TGG | 0.493807 | 8_3:-67184407 | Msa1303880:CDS |
| TTTCAGTGTGCATTTGTACA+TGG | 0.494342 | 8_3:-67180781 | Msa1303880:CDS |
| TACAATGAACACCCTGATGA+TGG | 0.498736 | 8_3:-67180970 | Msa1303880:CDS |
| TCGTTGTTCGCTCTATGGTC+AGG | 0.500862 | 8_3:-67181337 | Msa1303880:intron |
| ATATCTAAATTCGGGAAGAA+AGG | 0.501858 | 8_3:-67184441 | Msa1303880:CDS |
| CTTATAACTGGAAGTGCCGT+AGG | 0.502358 | 8_3:+67180940 | None:intergenic |
| AACAGTGCTGGTATCTCAAT+AGG | 0.503794 | 8_3:-67181168 | Msa1303880:intron |
| GCCCAGTTGAATGTTCCTCC+TGG | 0.506464 | 8_3:-67184414 | Msa1303880:CDS |
| AAGATTCTCCACCGTGACAT+TGG | 0.511289 | 8_3:+67181122 | None:intergenic |
| ATCTGTTACATTCTGGGACA+TGG | 0.514970 | 8_3:+67180678 | None:intergenic |
| CAAGGTTCTCGCATGGAGAT+GGG | 0.517048 | 8_3:+67180737 | None:intergenic |
| CGGTGGAGAATCTTCTTGTG+TGG | 0.518175 | 8_3:-67181113 | Msa1303880:CDS |
| TGCCTTCGTATGGGTATGGA+AGG | 0.520366 | 8_3:-67183180 | Msa1303880:CDS |
| CACCATAAATGGACAAGGAC+AGG | 0.524495 | 8_3:-67182332 | Msa1303880:CDS |
| AATAGCAATAAAGAGTGGTT+GGG | 0.528054 | 8_3:-67181414 | Msa1303880:CDS |
| TCTAAATTCGGGAAGAAAGG+TGG | 0.532571 | 8_3:-67184438 | Msa1303880:CDS |
| TCAATAGGCAGTGAGATGTC+TGG | 0.537106 | 8_3:-67181153 | Msa1303880:CDS |
| TTGCGAGGATATGTTGATAG+AGG | 0.543214 | 8_3:-67181465 | Msa1303880:CDS |
| TGGCCATGGAGTTCGTGTGC+CGG | 0.544487 | 8_3:-67180893 | Msa1303880:CDS |
| TGGCAGAGAAATATGGTTGT+TGG | 0.545952 | 8_3:-67184603 | Msa1303880:CDS |
| AGAAGCGTCTCAACTATACA+AGG | 0.547927 | 8_3:-67182288 | Msa1303880:CDS |
| TTCACCAGTGTCTATGGCCA+TGG | 0.553675 | 8_3:-67180907 | Msa1303880:CDS |
| GGTGGAGAATCTTCTTGTGT+GGG | 0.553858 | 8_3:-67181112 | Msa1303880:CDS |
| CTAAATTCGGGAAGAAAGGT+GGG | 0.555450 | 8_3:-67184437 | Msa1303880:CDS |
| AAACTGCCATATCGAGGCCC+AGG | 0.556888 | 8_3:+67183151 | None:intergenic |
| CGAAAAGTTACATTTCTCAC+AGG | 0.557026 | 8_3:+67180844 | None:intergenic |
| CGGATCAATATATTCATGGA+AGG | 0.557077 | 8_3:+67181365 | None:intergenic |
| ATAAAGACTGCACCTGGACG+AGG | 0.558213 | 8_3:-67181069 | Msa1303880:CDS |
| TGCCTCCATTGCCTTCGTAT+GGG | 0.559447 | 8_3:-67183189 | Msa1303880:CDS |
| GCTAACAGGATGAGAAGTAT+TGG | 0.559461 | 8_3:-67183219 | Msa1303880:intron |
| GTCTCATCTTCGGAATCGGC+CGG | 0.559511 | 8_3:+67184550 | None:intergenic |
| AACTCCATGGCCATAGACAC+TGG | 0.562611 | 8_3:+67180903 | None:intergenic |
| GGCCACTTGTTCAGATCATG+TGG | 0.563541 | 8_3:-67182264 | Msa1303880:CDS |
| TTCTTGTGTGGGATTCTAGG+CGG | 0.572910 | 8_3:-67181101 | Msa1303880:CDS |
| GGGATTCTAGGCGGGGTGTG+AGG | 0.573008 | 8_3:-67181092 | Msa1303880:CDS |
| GACCACATGATCTGAACAAG+TGG | 0.577629 | 8_3:+67182262 | None:intergenic |
| CTTGTGTGGGATTCTAGGCG+GGG | 0.583944 | 8_3:-67181099 | Msa1303880:CDS |
| CAGAGAAATATGGTTGTTGG+TGG | 0.585896 | 8_3:-67184600 | Msa1303880:CDS |
| GCCGATTCCGAAGATGAGAC+CGG | 0.586173 | 8_3:-67184547 | Msa1303880:CDS |
| CTCCATGCGAGAACCTTGAT+CGG | 0.593522 | 8_3:-67180732 | Msa1303880:CDS |
| TACCGATCAAGGTTCTCGCA+TGG | 0.601717 | 8_3:+67180730 | None:intergenic |
| AGAGGACTGTTACATGAGCG+TGG | 0.605909 | 8_3:-67181447 | Msa1303880:CDS |
| CGTGTGCCGGTACGTATTCA+CGG | 0.606425 | 8_3:-67180880 | Msa1303880:CDS |
| GTGAGGATAAAGACTGCACC+TGG | 0.609634 | 8_3:-67181075 | Msa1303880:CDS |
| TAGAAAGAGAGTGATATGGC+TGG | 0.610232 | 8_3:+67184362 | None:intergenic |
| ACGTTTGAGAATGTCCGTGT+TGG | 0.610358 | 8_3:-67181012 | Msa1303880:CDS |
| GAGGACTGTTACATGAGCGT+GGG | 0.610911 | 8_3:-67181446 | Msa1303880:CDS |
| AGAGAAATATGGTTGTTGGT+GGG | 0.613387 | 8_3:-67184599 | Msa1303880:CDS |
| AGTATGGAATTGCTTATGGA+AGG | 0.613405 | 8_3:-67181388 | Msa1303880:CDS |
| CCATACCCATACGAAGGCAA+TGG | 0.614853 | 8_3:+67183184 | None:intergenic |
| TACCCATACGAAGGCAATGG+AGG | 0.617610 | 8_3:+67183187 | None:intergenic |
| TCACTACCGTGAATACGTAC+CGG | 0.621904 | 8_3:+67180874 | None:intergenic |
| TGATGATGGATATGACCCTA+CGG | 0.624117 | 8_3:-67180956 | Msa1303880:CDS |
| TTATAACTGGAAGTGCCGTA+GGG | 0.625551 | 8_3:+67180941 | None:intergenic |
| GTACCGGCACACGAACTCCA+TGG | 0.628417 | 8_3:+67180890 | None:intergenic |
| ATAGGCAGTGAGATGTCTGG+TGG | 0.634420 | 8_3:-67181150 | Msa1303880:CDS |
| GGTGCAGTAAGCCAACGACC+AGG | 0.635900 | 8_3:+67184396 | None:intergenic |
| AAGCGTCTCAACTATACAAG+GGG | 0.641739 | 8_3:-67182286 | Msa1303880:CDS |
| CTGGACGAGGCGGATATGTG+CGG | 0.643013 | 8_3:-67181056 | Msa1303880:CDS |
| GAAGCGTCTCAACTATACAA+GGG | 0.652119 | 8_3:-67182287 | Msa1303880:CDS |
| CTTGATCGGTACAATGAGCA+AGG | 0.653027 | 8_3:-67180718 | Msa1303880:CDS |
| TGAATCAAACTGCCATATCG+AGG | 0.653937 | 8_3:+67183145 | None:intergenic |
| GGAAAATGGTCCCTATTACA+CGG | 0.656452 | 8_3:+67180758 | None:intergenic |
| GATGCAATAGCAATAAAGAG+TGG | 0.657676 | 8_3:-67181419 | Msa1303880:CDS |
| TAGGCAGTGAGATGTCTGGT+GGG | 0.661719 | 8_3:-67181149 | Msa1303880:CDS |
| GCCTTCGTATGGGTATGGAA+GGG | 0.661840 | 8_3:-67183179 | Msa1303880:CDS |
| TAAATTCGGGAAGAAAGGTG+GGG | 0.665836 | 8_3:-67184436 | Msa1303880:CDS |
| ACCAGGAGGAACATTCAACT+GGG | 0.666212 | 8_3:+67184413 | None:intergenic |
| TGGTGGGATATCCAATGTCA+CGG | 0.666291 | 8_3:-67181133 | Msa1303880:CDS |
| TCCCTTCCATACCCATACGA+AGG | 0.671608 | 8_3:+67183178 | None:intergenic |
| TAGGGTCATATCCATCATCA+GGG | 0.672022 | 8_3:+67180959 | None:intergenic |
| AAGACTGCACCTGGACGAGG+CGG | 0.675169 | 8_3:-67181066 | Msa1303880:CDS |
| ATGGACAAGGACAGGCATGG+TGG | 0.685955 | 8_3:-67182324 | Msa1303880:CDS |
| GGCTTGCACAGACTCTTGCG+AGG | 0.691384 | 8_3:-67181480 | Msa1303880:intron |
| TAAATGGACAAGGACAGGCA+TGG | 0.697306 | 8_3:-67182327 | Msa1303880:CDS |
| GATTCCGAAGATGAGACCGG+TGG | 0.698458 | 8_3:-67184544 | Msa1303880:CDS |
| GCAGTAAGCCAACGACCAGG+AGG | 0.722188 | 8_3:+67184399 | None:intergenic |
| AATGGCACCATAAATGGACA+AGG | 0.731657 | 8_3:-67182337 | Msa1303880:CDS |
| TCTTCATCACAATTCCAACA+CGG | 0.739063 | 8_3:+67180998 | None:intergenic |
| AGCGTCTCAACTATACAAGG+GGG | 0.750070 | 8_3:-67182285 | Msa1303880:CDS |
| TGGGATATCCAATGTCACGG+TGG | 0.786411 | 8_3:-67181130 | Msa1303880:CDS |
| TGACCATAGAGCGAACAACG+AGG | 0.809677 | 8_3:+67181339 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATGTTTTGATTTTAAATT+AGG | - | chr8_3:67181038-67181057 | Msa1303880:CDS | 10.0% |
| !!! | TTTCCTTATTTTTAATAATA+AGG | - | chr8_3:67183478-67183497 | Msa1303880:intron | 10.0% |
| !!! | TTACTTTTAAAATTAGCAAA+TGG | + | chr8_3:67181705-67181724 | None:intergenic | 15.0% |
| !!! | CTAATTTTAAAAGTAAGATA+GGG | - | chr8_3:67181709-67181728 | Msa1303880:intron | 15.0% |
| !!! | AATAGCAAATTTTTATATAG+TGG | + | chr8_3:67181844-67181863 | None:intergenic | 15.0% |
| !! | TGTAAAAACATTACAATAAA+AGG | - | chr8_3:67183130-67183149 | Msa1303880:intron | 15.0% |
| !! | AATCATAATATATGATAAGA+AGG | + | chr8_3:67184086-67184105 | None:intergenic | 15.0% |
| !! | TATAAAAACCGATAAAAATG+CGG | + | chr8_3:67180679-67180698 | None:intergenic | 20.0% |
| !!! | CATTTTTATCGGTTTTTATA+TGG | - | chr8_3:67180679-67180698 | Msa1303880:CDS | 20.0% |
| !! | ATATGTATGATAGAAGATTA+TGG | - | chr8_3:67181434-67181453 | Msa1303880:CDS | 20.0% |
| !!! | GCTAATTTTAAAAGTAAGAT+AGG | - | chr8_3:67181708-67181727 | Msa1303880:intron | 20.0% |
| !!! | TCTTGCTTTAAATTAGTTAA+AGG | - | chr8_3:67182226-67182245 | Msa1303880:CDS | 20.0% |
| !!! | CTTGCTTTAAATTAGTTAAA+GGG | - | chr8_3:67182227-67182246 | Msa1303880:CDS | 20.0% |
| !!! | ATTTTGCAATACAATCTATT+TGG | - | chr8_3:67182338-67182357 | Msa1303880:CDS | 20.0% |
| !!! | CAATTTTAGAAGTTTTGTAT+TGG | - | chr8_3:67182535-67182554 | Msa1303880:intron | 20.0% |
| !! | TTTCCTTTAATAAGGTTTAT+GGG | + | chr8_3:67182626-67182645 | None:intergenic | 20.0% |
| !!! | TTTTCCTTTAATAAGGTTTA+TGG | + | chr8_3:67182627-67182646 | None:intergenic | 20.0% |
| !! | TAAACCTTATTAAAGGAAAA+AGG | - | chr8_3:67182627-67182646 | Msa1303880:intron | 20.0% |
| !! | TATAAGATTAATGAAGGATT+CGG | + | chr8_3:67182684-67182703 | None:intergenic | 20.0% |
| !! | AATCAGTATAAGATTAATGA+AGG | + | chr8_3:67182690-67182709 | None:intergenic | 20.0% |
| !!! | AATAAAAGGTGTTACAATTT+TGG | - | chr8_3:67183144-67183163 | Msa1303880:CDS | 20.0% |
| !!! | ATGAAATAAAGTTTTGTACT+TGG | + | chr8_3:67183231-67183250 | None:intergenic | 20.0% |
| !!! | CTGCCTTATTATTAAAAATA+AGG | + | chr8_3:67183484-67183503 | None:intergenic | 20.0% |
| !!! | CTTATTTTTAATAATAAGGC+AGG | - | chr8_3:67183482-67183501 | Msa1303880:intron | 20.0% |
| !!! | TCTTTTTTCTTCTATTTGTT+TGG | - | chr8_3:67183519-67183538 | Msa1303880:intron | 20.0% |
| !!! | TGTTAATGTGTCAATATTTT+CGG | - | chr8_3:67183554-67183573 | Msa1303880:intron | 20.0% |
| !! | CAATTATATACCATAAAGAT+AGG | - | chr8_3:67183720-67183739 | Msa1303880:intron | 20.0% |
| !! | TTAATAATCCCAAATTTCTA+TGG | - | chr8_3:67183801-67183820 | Msa1303880:intron | 20.0% |
| !! | TCATAAAAAAATATGCCAAA+AGG | + | chr8_3:67184036-67184055 | None:intergenic | 20.0% |
| !! | TTTTATATGGCAGAGAAATA+TGG | - | chr8_3:67180692-67180711 | Msa1303880:CDS | 25.0% |
| !!! | GTTTTTAATTTGACGGATTT+TGG | - | chr8_3:67180780-67180799 | Msa1303880:CDS | 25.0% |
| ! | GTTTCTGCTATATCTAAATT+CGG | - | chr8_3:67180852-67180871 | Msa1303880:CDS | 25.0% |
| ! | TTTCTGCTATATCTAAATTC+GGG | - | chr8_3:67180853-67180872 | Msa1303880:CDS | 25.0% |
| ! | AGAGTAAAAACTAACATCAA+TGG | + | chr8_3:67180988-67181007 | None:intergenic | 25.0% |
| ! | TAAAAAAGATGGTAGAAACT+TGG | - | chr8_3:67181244-67181263 | Msa1303880:intron | 25.0% |
| ! | TACAAGAGAAACTATTAAGA+AGG | - | chr8_3:67181377-67181396 | Msa1303880:CDS | 25.0% |
| ! | GGATTTAGAAATTAAAGAGT+TGG | - | chr8_3:67181398-67181417 | Msa1303880:CDS | 25.0% |
| ! | TAGAAATTAAAGAGTTGGAT+AGG | - | chr8_3:67181403-67181422 | Msa1303880:CDS | 25.0% |
| ! | AGAAATTAAAGAGTTGGATA+GGG | - | chr8_3:67181404-67181423 | Msa1303880:CDS | 25.0% |
| ! | TGTAATTCTATGTTTCTCTT+TGG | - | chr8_3:67181974-67181993 | Msa1303880:intron | 25.0% |
| ! | TAAAATGTTTAGTTACACGA+GGG | + | chr8_3:67182033-67182052 | None:intergenic | 25.0% |
| ! | ATAAAATGTTTAGTTACACG+AGG | + | chr8_3:67182034-67182053 | None:intergenic | 25.0% |
| ! | AGCTTAAGCATTAGAAATAT+TGG | + | chr8_3:67182468-67182487 | None:intergenic | 25.0% |
| ! | ATTTCTAATGCTTAAGCTAA+TGG | - | chr8_3:67182470-67182489 | Msa1303880:intron | 25.0% |
| ! | TTCCTTTAATAAGGTTTATG+GGG | + | chr8_3:67182625-67182644 | None:intergenic | 25.0% |
| !! | TAAGCCTTTTTCCTTTAATA+AGG | + | chr8_3:67182634-67182653 | None:intergenic | 25.0% |
| ! | TTATTAAAGGAAAAAGGCTT+AGG | - | chr8_3:67182633-67182652 | Msa1303880:intron | 25.0% |
| ! | TGATTAAGAAATCACTCTTA+AGG | - | chr8_3:67182709-67182728 | Msa1303880:intron | 25.0% |
| ! | GATTAAGAAATCACTCTTAA+GGG | - | chr8_3:67182710-67182729 | Msa1303880:intron | 25.0% |
| ! | CACTATTAAGGATAAATTCA+TGG | - | chr8_3:67182743-67182762 | Msa1303880:intron | 25.0% |
| !! | TTTTTCTTCTATTTGTTTGG+AGG | - | chr8_3:67183522-67183541 | Msa1303880:intron | 25.0% |
| !! | TTTTCTTCTATTTGTTTGGA+GGG | - | chr8_3:67183523-67183542 | Msa1303880:intron | 25.0% |
| !! | TATTTTTCTGCCTATCTTTA+TGG | + | chr8_3:67183733-67183752 | None:intergenic | 25.0% |
| ! | ATAGGCAGAAAAATATTACT+TGG | - | chr8_3:67183738-67183757 | Msa1303880:intron | 25.0% |
| ! | ATCTATATCTGTTACATTCT+GGG | + | chr8_3:67184633-67184652 | None:intergenic | 25.0% |
| ! | AATCTATATCTGTTACATTC+TGG | + | chr8_3:67184634-67184653 | None:intergenic | 25.0% |
| !!! | TTTAATTTGACGGATTTTGG+AGG | - | chr8_3:67180783-67180802 | Msa1303880:CDS | 30.0% |
| ATATCTAAATTCGGGAAGAA+AGG | - | chr8_3:67180861-67180880 | Msa1303880:CDS | 30.0% | |
| ATATGGCTGGTAAGATTAAA+AGG | + | chr8_3:67180930-67180949 | None:intergenic | 30.0% | |
| TAGGAAATTCATAATTGCTG+TGG | - | chr8_3:67181057-67181076 | Msa1303880:CDS | 30.0% | |
| AGTACCTATCGTAAAAAAGA+TGG | - | chr8_3:67181233-67181252 | Msa1303880:intron | 30.0% | |
| !!! | TCTACCATCTTTTTTACGAT+AGG | + | chr8_3:67181240-67181259 | None:intergenic | 30.0% |
| TGTATGATAGAAGATTATGG+CGG | - | chr8_3:67181437-67181456 | Msa1303880:CDS | 30.0% | |
| TACGAAGATGAAATTTCTGA+AGG | - | chr8_3:67181516-67181535 | Msa1303880:intron | 30.0% | |
| ACGAAGATGAAATTTCTGAA+GGG | - | chr8_3:67181517-67181536 | Msa1303880:intron | 30.0% | |
| ! | GTACATATTCCTGAGTTTTA+CGG | + | chr8_3:67181571-67181590 | None:intergenic | 30.0% |
| AGCAACTAATGAAATGTCTT+TGG | - | chr8_3:67181751-67181770 | Msa1303880:intron | 30.0% | |
| CAGCGAAATACATTATATAG+TGG | + | chr8_3:67181915-67181934 | None:intergenic | 30.0% | |
| CTTAAAGATGTTGTGATAAC+AGG | - | chr8_3:67182190-67182209 | Msa1303880:intron | 30.0% | |
| TGAACAAATATAAGTCAACC+AGG | + | chr8_3:67182517-67182536 | None:intergenic | 30.0% | |
| ! | GGAGTATTAGTAAACTATGT+TGG | + | chr8_3:67182568-67182587 | None:intergenic | 30.0% |
| ACCAAACTAAGATACATCAA+GGG | + | chr8_3:67182589-67182608 | None:intergenic | 30.0% | |
| TCCTTTAATAAGGTTTATGG+GGG | + | chr8_3:67182624-67182643 | None:intergenic | 30.0% | |
| AAATTCATGGATAACAATCC+AGG | - | chr8_3:67182756-67182775 | Msa1303880:intron | 30.0% | |
| AGTCATGTTATAGTCTATCT+TGG | + | chr8_3:67182831-67182850 | None:intergenic | 30.0% | |
| !! | GTAATGTTTTTACAGTCGTA+TGG | + | chr8_3:67183124-67183143 | None:intergenic | 30.0% |
| CGAATATAGAACGAATATCT+TGG | + | chr8_3:67183421-67183440 | None:intergenic | 30.0% | |
| ! | AGTCTCTGGATGATTAATTT+TGG | - | chr8_3:67183589-67183608 | Msa1303880:intron | 30.0% |
| CCTGATAAAGAATAACAGAA+AGG | + | chr8_3:67183691-67183710 | None:intergenic | 30.0% | |
| CCTTTCTGTTATTCTTTATC+AGG | - | chr8_3:67183688-67183707 | Msa1303880:intron | 30.0% | |
| !!! | ATCTATGCTTGTTTTGTTGT+TGG | - | chr8_3:67183768-67183787 | Msa1303880:intron | 30.0% |
| !!! | TCTATGCTTGTTTTGTTGTT+GGG | - | chr8_3:67183769-67183788 | Msa1303880:intron | 30.0% |
| AATAGCAATAAAGAGTGGTT+GGG | - | chr8_3:67183888-67183907 | Msa1303880:intron | 30.0% | |
| GTTTCGGATCAATATATTCA+TGG | + | chr8_3:67183944-67183963 | None:intergenic | 30.0% | |
| ! | AAAAATATGCCAAAAGGCAT+GGG | + | chr8_3:67184030-67184049 | None:intergenic | 30.0% |
| AAAAAATATGCCAAAAGGCA+TGG | + | chr8_3:67184031-67184050 | None:intergenic | 30.0% | |
| TTTATGAAATGAAACAGTGC+TGG | - | chr8_3:67184122-67184141 | Msa1303880:intron | 30.0% | |
| AAGCTTATGTCTCTTATAAC+TGG | + | chr8_3:67184377-67184396 | None:intergenic | 30.0% | |
| AGAGAAATATGGTTGTTGGT+GGG | - | chr8_3:67180703-67180722 | Msa1303880:CDS | 35.0% | |
| !!! | ACCGGTGGTTTTTAATTTGA+CGG | - | chr8_3:67180773-67180792 | Msa1303880:CDS | 35.0% |
| TCCGTCAAATTAAAAACCAC+CGG | + | chr8_3:67180777-67180796 | None:intergenic | 35.0% | |
| CGAAGATAAAGATGTTGTGT+TGG | - | chr8_3:67181144-67181163 | Msa1303880:CDS | 35.0% | |
| TGTTGGATGTGTAGTAAGAT+TGG | - | chr8_3:67181161-67181180 | Msa1303880:CDS | 35.0% | |
| ACAATATTAGAGAGAGAGAG+AGG | - | chr8_3:67181204-67181223 | Msa1303880:intron | 35.0% | |
| ! | AAACTTGGTTCAAGTGGTTT+TGG | - | chr8_3:67181259-67181278 | Msa1303880:intron | 35.0% |
| ! | TGAAATTTCTGAAGGGTACA+TGG | - | chr8_3:67181524-67181543 | Msa1303880:intron | 35.0% |
| ! | GAAATTTCTGAAGGGTACAT+GGG | - | chr8_3:67181525-67181544 | Msa1303880:intron | 35.0% |
| GACATTTCATTAGTTGCTAG+CGG | + | chr8_3:67181749-67181768 | None:intergenic | 35.0% | |
| TGACTCATTGTTGATCTCTT+TGG | - | chr8_3:67181933-67181952 | Msa1303880:intron | 35.0% | |
| AGACATGCATTGTAAGAAAC+AGG | + | chr8_3:67182004-67182023 | None:intergenic | 35.0% | |
| TACATTGTATCTGTCGTCTT+TGG | - | chr8_3:67182055-67182074 | Msa1303880:intron | 35.0% | |
| CTGAAGACCTTTATCATGAA+CGG | + | chr8_3:67182267-67182286 | None:intergenic | 35.0% | |
| ACAGAAATCTGAACATTTCC+TGG | - | chr8_3:67182496-67182515 | Msa1303880:intron | 35.0% | |
| TCCCTTGATGTATCTTAGTT+TGG | - | chr8_3:67182585-67182604 | Msa1303880:intron | 35.0% | |
| CACCAAACTAAGATACATCA+AGG | + | chr8_3:67182590-67182609 | None:intergenic | 35.0% | |
| ACCCCCATAAACCTTATTAA+AGG | - | chr8_3:67182620-67182639 | Msa1303880:intron | 35.0% | |
| TAAGAAATCACTCTTAAGGG+AGG | - | chr8_3:67182713-67182732 | Msa1303880:intron | 35.0% | |
| ! | CTAATCTATCTAGAGTATCC+TGG | + | chr8_3:67182777-67182796 | None:intergenic | 35.0% |
| AAGCATTACATAGAGAAGGA+TGG | + | chr8_3:67182891-67182910 | None:intergenic | 35.0% | |
| TCCTTCTCTATGTAATGCTT+CGG | - | chr8_3:67182891-67182910 | Msa1303880:intron | 35.0% | |
| ATCTATTGCCATGATTGACA+GGG | - | chr8_3:67182939-67182958 | Msa1303880:intron | 35.0% | |
| !! | TGTTTTTACAGTCGTATGGA+TGG | + | chr8_3:67183120-67183139 | None:intergenic | 35.0% |
| TAGAATAGAAGATACTTGCC+AGG | + | chr8_3:67183208-67183227 | None:intergenic | 35.0% | |
| AAGAACTGATCAGAAACTAG+TGG | + | chr8_3:67183268-67183287 | None:intergenic | 35.0% | |
| CCTATAACTACTCAAGATAG+GGG | + | chr8_3:67183291-67183310 | None:intergenic | 35.0% | |
| CCCTATAACTACTCAAGATA+GGG | + | chr8_3:67183292-67183311 | None:intergenic | 35.0% | |
| CCCTATCTTGAGTAGTTATA+GGG | - | chr8_3:67183289-67183308 | Msa1303880:intron | 35.0% | |
| ACCCTATAACTACTCAAGAT+AGG | + | chr8_3:67183293-67183312 | None:intergenic | 35.0% | |
| TGTGCAAGCCATAGAAATTT+GGG | + | chr8_3:67183812-67183831 | None:intergenic | 35.0% | |
| GATGCAATAGCAATAAAGAG+TGG | - | chr8_3:67183883-67183902 | Msa1303880:intron | 35.0% | |
| CAATAGCAATAAAGAGTGGT+TGG | - | chr8_3:67183887-67183906 | Msa1303880:intron | 35.0% | |
| GATCAGTATGGAATTGCTTA+TGG | - | chr8_3:67183910-67183929 | Msa1303880:intron | 35.0% | |
| AGTATGGAATTGCTTATGGA+AGG | - | chr8_3:67183914-67183933 | Msa1303880:intron | 35.0% | |
| CGGATCAATATATTCATGGA+AGG | + | chr8_3:67183940-67183959 | None:intergenic | 35.0% | |
| ATGTGCGGCAAATAACTTAT+CGG | - | chr8_3:67184261-67184280 | Msa1303880:intron | 35.0% | |
| TCTTCATCACAATTCCAACA+CGG | + | chr8_3:67184307-67184326 | None:intergenic | 35.0% | |
| CGAAAAGTTACATTTCTCAC+AGG | + | chr8_3:67184461-67184480 | None:intergenic | 35.0% | |
| AAAGATGTGCTTCTTCTTGT+AGG | + | chr8_3:67184504-67184523 | None:intergenic | 35.0% | |
| TTTCAGTGTGCATTTGTACA+TGG | - | chr8_3:67184521-67184540 | Msa1303880:CDS | 35.0% | |
| ! | ATGGATCGCCGCATTTTTAT+CGG | - | chr8_3:67180668-67180687 | Msa1303880:CDS | 40.0% |
| TGGCAGAGAAATATGGTTGT+TGG | - | chr8_3:67180699-67180718 | Msa1303880:CDS | 40.0% | |
| CAGAGAAATATGGTTGTTGG+TGG | - | chr8_3:67180702-67180721 | Msa1303880:CDS | 40.0% | |
| !! | TATGGTTGTTGGTGGGTTTA+TGG | - | chr8_3:67180710-67180729 | Msa1303880:CDS | 40.0% |
| !!! | GTTGGTGGGTTTATGGTTTT+CGG | - | chr8_3:67180717-67180736 | Msa1303880:CDS | 40.0% |
| TCTAAATTCGGGAAGAAAGG+TGG | - | chr8_3:67180864-67180883 | Msa1303880:CDS | 40.0% | |
| CTAAATTCGGGAAGAAAGGT+GGG | - | chr8_3:67180865-67180884 | Msa1303880:CDS | 40.0% | |
| TAAATTCGGGAAGAAAGGTG+GGG | - | chr8_3:67180866-67180885 | Msa1303880:CDS | 40.0% | |
| TAGAAAGAGAGTGATATGGC+TGG | + | chr8_3:67180943-67180962 | None:intergenic | 40.0% | |
| GAGCTAGAAAGAGAGTGATA+TGG | + | chr8_3:67180947-67180966 | None:intergenic | 40.0% | |
| ATATTAGAGAGAGAGAGAGG+TGG | - | chr8_3:67181207-67181226 | Msa1303880:intron | 40.0% | |
| TATTAGAGAGAGAGAGAGGT+GGG | - | chr8_3:67181208-67181227 | Msa1303880:intron | 40.0% | |
| TGGTAGAAACTTGGTTCAAG+TGG | - | chr8_3:67181253-67181272 | Msa1303880:intron | 40.0% | |
| !! | AGTAAGCAGTGTTGATCCTA+TGG | - | chr8_3:67181311-67181330 | Msa1303880:intron | 40.0% |
| !! | GTAAGCAGTGTTGATCCTAT+GGG | - | chr8_3:67181312-67181331 | Msa1303880:intron | 40.0% |
| !! | TAAGCAGTGTTGATCCTATG+GGG | - | chr8_3:67181313-67181332 | Msa1303880:intron | 40.0% |
| ACTAAGTGGGATCAGCTATA+TGG | + | chr8_3:67181471-67181490 | None:intergenic | 40.0% | |
| ATATAGCTGATCCCACTTAG+TGG | - | chr8_3:67181470-67181489 | Msa1303880:CDS | 40.0% | |
| TATAGCTGATCCCACTTAGT+GGG | - | chr8_3:67181471-67181490 | Msa1303880:CDS | 40.0% | |
| CAAACCTTATCCCACTAAGT+GGG | + | chr8_3:67181484-67181503 | None:intergenic | 40.0% | |
| ACATGATTGCCGTAAAACTC+AGG | - | chr8_3:67181559-67181578 | Msa1303880:intron | 40.0% | |
| ! | GCTAACAGGATGAGAAGTAT+TGG | - | chr8_3:67182083-67182102 | Msa1303880:intron | 40.0% |
| TGAATCAAACTGCCATATCG+AGG | + | chr8_3:67182160-67182179 | None:intergenic | 40.0% | |
| CGATATGGCAGTTTGATTCA+TGG | - | chr8_3:67182160-67182179 | Msa1303880:intron | 40.0% | |
| AGATGTTGTGATAACAGGCA+AGG | - | chr8_3:67182195-67182214 | Msa1303880:CDS | 40.0% | |
| GTCTTCACCGTTCATGATAA+AGG | - | chr8_3:67182257-67182276 | Msa1303880:CDS | 40.0% | |
| GGAGGCTTAATGCACTATTA+AGG | - | chr8_3:67182731-67182750 | Msa1303880:intron | 40.0% | |
| TAGAGAAGGATGGAAAGCAA+AGG | + | chr8_3:67182881-67182900 | None:intergenic | 40.0% | |
| CATCTATTGCCATGATTGAC+AGG | - | chr8_3:67182938-67182957 | Msa1303880:intron | 40.0% | |
| AATGGCACCATAAATGGACA+AGG | - | chr8_3:67182965-67182984 | Msa1303880:intron | 40.0% | |
| TTGTATAGTTGAGACGCTTC+TGG | + | chr8_3:67183015-67183034 | None:intergenic | 40.0% | |
| !! | AGAAGCGTCTCAACTATACA+AGG | - | chr8_3:67183014-67183033 | Msa1303880:intron | 40.0% |
| ! | GAAGCGTCTCAACTATACAA+GGG | - | chr8_3:67183015-67183034 | Msa1303880:intron | 40.0% |
| AAGCGTCTCAACTATACAAG+GGG | - | chr8_3:67183016-67183035 | Msa1303880:intron | 40.0% | |
| ! | GTGTTTGGAGCTTCAAATAC+AGG | + | chr8_3:67183172-67183191 | None:intergenic | 40.0% |
| ! | TTTGAAGCTCCAAACACTGA+CGG | - | chr8_3:67183175-67183194 | Msa1303880:CDS | 40.0% |
| CCCCTATCTTGAGTAGTTAT+AGG | - | chr8_3:67183288-67183307 | Msa1303880:intron | 40.0% | |
| CTGTGCAAGCCATAGAAATT+TGG | + | chr8_3:67183813-67183832 | None:intergenic | 40.0% | |
| ! | TTGCGAGGATATGTTGATAG+AGG | - | chr8_3:67183837-67183856 | Msa1303880:intron | 40.0% |
| !! | AACAGTGCTGGTATCTCAAT+AGG | - | chr8_3:67184134-67184153 | Msa1303880:intron | 40.0% |
| ATCTTCTTGTGTGGGATTCT+AGG | - | chr8_3:67184198-67184217 | Msa1303880:intron | 40.0% | |
| TACAATGAACACCCTGATGA+TGG | - | chr8_3:67184332-67184351 | Msa1303880:CDS | 40.0% | |
| TAGGGTCATATCCATCATCA+GGG | + | chr8_3:67184346-67184365 | None:intergenic | 40.0% | |
| !! | TGATGATGGATATGACCCTA+CGG | - | chr8_3:67184346-67184365 | Msa1303880:CDS | 40.0% |
| !! | TTATAACTGGAAGTGCCGTA+GGG | + | chr8_3:67184364-67184383 | None:intergenic | 40.0% |
| ATAAGCTTCACCAGTGTCTA+TGG | - | chr8_3:67184389-67184408 | Msa1303880:CDS | 40.0% | |
| ! | ACTTTTCGTGACATGTCAGT+TGG | - | chr8_3:67184473-67184492 | Msa1303880:CDS | 40.0% |
| ! | CTTTTCGTGACATGTCAGTT+GGG | - | chr8_3:67184474-67184493 | Msa1303880:CDS | 40.0% |
| TTTGTACATGGCCGTGTAAT+AGG | - | chr8_3:67184533-67184552 | Msa1303880:CDS | 40.0% | |
| TTGTACATGGCCGTGTAATA+GGG | - | chr8_3:67184534-67184553 | Msa1303880:CDS | 40.0% | |
| GGAAAATGGTCCCTATTACA+CGG | + | chr8_3:67184547-67184566 | None:intergenic | 40.0% | |
| !! | ATCTGTTACATTCTGGGACA+TGG | + | chr8_3:67184627-67184646 | None:intergenic | 40.0% |
| ! | GTGGGTTTATGGTTTTCGGT+CGG | - | chr8_3:67180721-67180740 | Msa1303880:CDS | 45.0% |
| ! | TGGGTTTATGGTTTTCGGTC+GGG | - | chr8_3:67180722-67180741 | Msa1303880:CDS | 45.0% |
| AAAACCACCGGTCTCATCTT+CGG | + | chr8_3:67180765-67180784 | None:intergenic | 45.0% | |
| !!! | TTTGACGGATTTTGGAGGTG+TGG | - | chr8_3:67180788-67180807 | Msa1303880:CDS | 45.0% |
| !!! | TTGACGGATTTTGGAGGTGT+GGG | - | chr8_3:67180789-67180808 | Msa1303880:CDS | 45.0% |
| !! | ATTTTGGAGGTGTGGGTGAT+GGG | - | chr8_3:67180796-67180815 | Msa1303880:CDS | 45.0% |
| ACCAGGAGGAACATTCAACT+GGG | + | chr8_3:67180892-67180911 | None:intergenic | 45.0% | |
| ATTAGAGAGAGAGAGAGGTG+GGG | - | chr8_3:67181209-67181228 | Msa1303880:intron | 45.0% | |
| GTGATTTGACTACTCCCCAT+AGG | + | chr8_3:67181330-67181349 | None:intergenic | 45.0% | |
| ATGGGGAGTAGTCAAATCAC+TGG | - | chr8_3:67181330-67181349 | Msa1303880:intron | 45.0% | |
| AGTAGTCAAATCACTGGAGG+CGG | - | chr8_3:67181336-67181355 | Msa1303880:intron | 45.0% | |
| TGATCCCACTTAGTGGGATA+AGG | - | chr8_3:67181477-67181496 | Msa1303880:intron | 45.0% | |
| CCAAACCTTATCCCACTAAG+TGG | + | chr8_3:67181485-67181504 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGGTT+TGG | - | chr8_3:67181482-67181501 | Msa1303880:intron | 45.0% | |
| GTATCTGTCGTCTTTGGTGA+CGG | - | chr8_3:67182061-67182080 | Msa1303880:intron | 45.0% | |
| !! | GAAGCAGTGCACTGATTAGA+AGG | - | chr8_3:67182796-67182815 | Msa1303880:intron | 45.0% |
| ! | GCCGAAGCATTACATAGAGA+AGG | + | chr8_3:67182895-67182914 | None:intergenic | 45.0% |
| CCATTATGCCCTGTCAATCA+TGG | + | chr8_3:67182950-67182969 | None:intergenic | 45.0% | |
| CCATGATTGACAGGGCATAA+TGG | - | chr8_3:67182947-67182966 | Msa1303880:intron | 45.0% | |
| GGGCATAATGGCACCATAAA+TGG | - | chr8_3:67182959-67182978 | Msa1303880:intron | 45.0% | |
| CACCATAAATGGACAAGGAC+AGG | - | chr8_3:67182970-67182989 | Msa1303880:intron | 45.0% | |
| TGCCTGTCCTTGTCCATTTA+TGG | + | chr8_3:67182975-67182994 | None:intergenic | 45.0% | |
| TAAATGGACAAGGACAGGCA+TGG | - | chr8_3:67182975-67182994 | Msa1303880:intron | 45.0% | |
| AGCGTCTCAACTATACAAGG+GGG | - | chr8_3:67183017-67183036 | Msa1303880:intron | 45.0% | |
| GACCACATGATCTGAACAAG+TGG | + | chr8_3:67183043-67183062 | None:intergenic | 45.0% | |
| ! | CTCTACGTGACTCTCCTTTT+TGG | - | chr8_3:67183089-67183108 | Msa1303880:intron | 45.0% |
| ! | TATGGATGGAGCGTCCAAAA+AGG | + | chr8_3:67183106-67183125 | None:intergenic | 45.0% |
| TTTCCTTAACTAGTGCCCCT+GGG | + | chr8_3:67183331-67183350 | None:intergenic | 45.0% | |
| CGTTTCTTTAACTAGTGCCC+CGG | - | chr8_3:67183439-67183458 | Msa1303880:intron | 45.0% | |
| GTTTCTTTAACTAGTGCCCC+GGG | - | chr8_3:67183440-67183459 | Msa1303880:intron | 45.0% | |
| TTTCTTTAACTAGTGCCCCG+GGG | - | chr8_3:67183441-67183460 | Msa1303880:intron | 45.0% | |
| AAAATGCTAACTAGTGCCCC+CGG | + | chr8_3:67183461-67183480 | None:intergenic | 45.0% | |
| AAGAGTGGTTGGGATCAGTA+TGG | - | chr8_3:67183898-67183917 | Msa1303880:intron | 45.0% | |
| TAGAGCGAACAACGAGGTTT+CGG | + | chr8_3:67183960-67183979 | None:intergenic | 45.0% | |
| AAACCTCGTTGTTCGCTCTA+TGG | - | chr8_3:67183960-67183979 | Msa1303880:intron | 45.0% | |
| TCAATAGGCAGTGAGATGTC+TGG | - | chr8_3:67184149-67184168 | Msa1303880:intron | 45.0% | |
| TGGTGGGATATCCAATGTCA+CGG | - | chr8_3:67184169-67184188 | Msa1303880:intron | 45.0% | |
| AAGATTCTCCACCGTGACAT+TGG | + | chr8_3:67184183-67184202 | None:intergenic | 45.0% | |
| GGTGGAGAATCTTCTTGTGT+GGG | - | chr8_3:67184190-67184209 | Msa1303880:intron | 45.0% | |
| TTCTTGTGTGGGATTCTAGG+CGG | - | chr8_3:67184201-67184220 | Msa1303880:intron | 45.0% | |
| ACGTTTGAGAATGTCCGTGT+TGG | - | chr8_3:67184290-67184309 | Msa1303880:intron | 45.0% | |
| GTAGGGTCATATCCATCATC+AGG | + | chr8_3:67184347-67184366 | None:intergenic | 45.0% | |
| !! | CTTATAACTGGAAGTGCCGT+AGG | + | chr8_3:67184365-67184384 | None:intergenic | 45.0% |
| TCACTACCGTGAATACGTAC+CGG | + | chr8_3:67184431-67184450 | None:intergenic | 45.0% | |
| ! | CTTGCTCATTGTACCGATCA+AGG | + | chr8_3:67184586-67184605 | None:intergenic | 45.0% |
| CTTGATCGGTACAATGAGCA+AGG | - | chr8_3:67184584-67184603 | Msa1303880:CDS | 45.0% | |
| GTACAATGAGCAAGGACAAC+TGG | - | chr8_3:67184592-67184611 | Msa1303880:CDS | 45.0% | |
| ! | TATGGTTTTCGGTCGGGTTC+CGG | - | chr8_3:67180728-67180747 | Msa1303880:CDS | 50.0% |
| ACCGGTCTCATCTTCGGAAT+CGG | + | chr8_3:67180759-67180778 | None:intergenic | 50.0% | |
| !! | GATTTTGGAGGTGTGGGTGA+TGG | - | chr8_3:67180795-67180814 | Msa1303880:CDS | 50.0% |
| !! | TTTTGGAGGTGTGGGTGATG+GGG | - | chr8_3:67180797-67180816 | Msa1303880:CDS | 50.0% |
| GACCAGGAGGAACATTCAAC+TGG | + | chr8_3:67180893-67180912 | None:intergenic | 50.0% | |
| TGAATGTTCCTCCTGGTCGT+TGG | - | chr8_3:67180895-67180914 | Msa1303880:CDS | 50.0% | |
| GGGAGTAGTCAAATCACTGG+AGG | - | chr8_3:67181333-67181352 | Msa1303880:intron | 50.0% | |
| TAGTTGCTAGCGGCTACAGT+CGG | + | chr8_3:67181739-67181758 | None:intergenic | 50.0% | |
| !! | GAAGGCAATGGAGGCATTAG+TGG | + | chr8_3:67182109-67182128 | None:intergenic | 50.0% |
| ATGCCTCCATTGCCTTCGTA+TGG | - | chr8_3:67182112-67182131 | Msa1303880:intron | 50.0% | |
| TGCCTCCATTGCCTTCGTAT+GGG | - | chr8_3:67182113-67182132 | Msa1303880:intron | 50.0% | |
| TACCCATACGAAGGCAATGG+AGG | + | chr8_3:67182118-67182137 | None:intergenic | 50.0% | |
| CCATACCCATACGAAGGCAA+TGG | + | chr8_3:67182121-67182140 | None:intergenic | 50.0% | |
| CCATTGCCTTCGTATGGGTA+TGG | - | chr8_3:67182118-67182137 | Msa1303880:intron | 50.0% | |
| TGCCTTCGTATGGGTATGGA+AGG | - | chr8_3:67182122-67182141 | Msa1303880:intron | 50.0% | |
| GCCTTCGTATGGGTATGGAA+GGG | - | chr8_3:67182123-67182142 | Msa1303880:intron | 50.0% | |
| TCCCTTCCATACCCATACGA+AGG | + | chr8_3:67182127-67182146 | None:intergenic | 50.0% | |
| GGCCACTTGTTCAGATCATG+TGG | - | chr8_3:67183038-67183057 | Msa1303880:intron | 50.0% | |
| GGATCTATGCCGTCAGTGTT+TGG | + | chr8_3:67183187-67183206 | None:intergenic | 50.0% | |
| AACACTGACGGCATAGATCC+TGG | - | chr8_3:67183187-67183206 | Msa1303880:CDS | 50.0% | |
| ! | TCATGCTAACTTGTGCCCCA+GGG | - | chr8_3:67183312-67183331 | Msa1303880:intron | 50.0% |
| TTCCTTAACTAGTGCCCCTG+GGG | + | chr8_3:67183330-67183349 | None:intergenic | 50.0% | |
| GTTTCCTTAACTAGTGCCCC+TGG | + | chr8_3:67183332-67183351 | None:intergenic | 50.0% | |
| TTCTTTAACTAGTGCCCCGG+GGG | - | chr8_3:67183442-67183461 | Msa1303880:intron | 50.0% | |
| AAATGCTAACTAGTGCCCCC+GGG | + | chr8_3:67183460-67183479 | None:intergenic | 50.0% | |
| GGAGTGTGTCTTCAAGTCTC+TGG | - | chr8_3:67183575-67183594 | Msa1303880:intron | 50.0% | |
| AGAGGACTGTTACATGAGCG+TGG | - | chr8_3:67183855-67183874 | Msa1303880:intron | 50.0% | |
| GAGGACTGTTACATGAGCGT+GGG | - | chr8_3:67183856-67183875 | Msa1303880:intron | 50.0% | |
| TGACCATAGAGCGAACAACG+AGG | + | chr8_3:67183966-67183985 | None:intergenic | 50.0% | |
| TCGTTGTTCGCTCTATGGTC+AGG | - | chr8_3:67183965-67183984 | Msa1303880:intron | 50.0% | |
| !! | GGTACGGGTTAGTTGAGCTA+GGG | + | chr8_3:67183996-67184015 | None:intergenic | 50.0% |
| !! | AGGTACGGGTTAGTTGAGCT+AGG | + | chr8_3:67183997-67184016 | None:intergenic | 50.0% |
| CTAACCCGTACCTTTCTGCA+TGG | - | chr8_3:67184004-67184023 | Msa1303880:intron | 50.0% | |
| ATGGGCCATGCAGAAAGGTA+CGG | + | chr8_3:67184012-67184031 | None:intergenic | 50.0% | |
| ATAGGCAGTGAGATGTCTGG+TGG | - | chr8_3:67184152-67184171 | Msa1303880:intron | 50.0% | |
| TAGGCAGTGAGATGTCTGGT+GGG | - | chr8_3:67184153-67184172 | Msa1303880:intron | 50.0% | |
| TGGGATATCCAATGTCACGG+TGG | - | chr8_3:67184172-67184191 | Msa1303880:intron | 50.0% | |
| CGGTGGAGAATCTTCTTGTG+TGG | - | chr8_3:67184189-67184208 | Msa1303880:intron | 50.0% | |
| TCTTGTGTGGGATTCTAGGC+GGG | - | chr8_3:67184202-67184221 | Msa1303880:intron | 50.0% | |
| GTGAGGATAAAGACTGCACC+TGG | - | chr8_3:67184227-67184246 | Msa1303880:intron | 50.0% | |
| ATAAAGACTGCACCTGGACG+AGG | - | chr8_3:67184233-67184252 | Msa1303880:intron | 50.0% | |
| TTCACCAGTGTCTATGGCCA+TGG | - | chr8_3:67184395-67184414 | Msa1303880:CDS | 50.0% | |
| AACTCCATGGCCATAGACAC+TGG | + | chr8_3:67184402-67184421 | None:intergenic | 50.0% | |
| CTCGCATGGAGATGGGAAAA+TGG | + | chr8_3:67184561-67184580 | None:intergenic | 50.0% | |
| CAAGGTTCTCGCATGGAGAT+GGG | + | chr8_3:67184568-67184587 | None:intergenic | 50.0% | |
| TCAAGGTTCTCGCATGGAGA+TGG | + | chr8_3:67184569-67184588 | None:intergenic | 50.0% | |
| CTCCATGCGAGAACCTTGAT+CGG | - | chr8_3:67184570-67184589 | Msa1303880:CDS | 50.0% | |
| TACCGATCAAGGTTCTCGCA+TGG | + | chr8_3:67184575-67184594 | None:intergenic | 50.0% | |
| GTCTCATCTTCGGAATCGGC+CGG | + | chr8_3:67180755-67180774 | None:intergenic | 55.0% | |
| ! | GCCGATTCCGAAGATGAGAC+CGG | - | chr8_3:67180755-67180774 | Msa1303880:CDS | 55.0% |
| GATTCCGAAGATGAGACCGG+TGG | - | chr8_3:67180758-67180777 | Msa1303880:CDS | 55.0% | |
| GCCCAGTTGAATGTTCCTCC+TGG | - | chr8_3:67180888-67180907 | Msa1303880:CDS | 55.0% | |
| !! | CGTCTTTGGTGACGGCTAAC+AGG | - | chr8_3:67182069-67182088 | Msa1303880:intron | 55.0% |
| AAACTGCCATATCGAGGCCC+AGG | + | chr8_3:67182154-67182173 | None:intergenic | 55.0% | |
| ATGGACAAGGACAGGCATGG+TGG | - | chr8_3:67182978-67182997 | Msa1303880:intron | 55.0% | |
| ! | GTCATGCTAACTTGTGCCCC+AGG | - | chr8_3:67183311-67183330 | Msa1303880:intron | 55.0% |
| ! | CATGCTAACTTGTGCCCCAG+GGG | - | chr8_3:67183313-67183332 | Msa1303880:intron | 55.0% |
| AATGCTAACTAGTGCCCCCG+GGG | + | chr8_3:67183459-67183478 | None:intergenic | 55.0% | |
| ! | TGGGCCATGCAGAAAGGTAC+GGG | + | chr8_3:67184011-67184030 | None:intergenic | 55.0% |
| AAGGCATGGGCCATGCAGAA+AGG | + | chr8_3:67184017-67184036 | None:intergenic | 55.0% | |
| ! | TCTGCATGGCCCATGCCTTT+TGG | - | chr8_3:67184018-67184037 | Msa1303880:intron | 55.0% |
| CTTGTGTGGGATTCTAGGCG+GGG | - | chr8_3:67184203-67184222 | Msa1303880:intron | 55.0% | |
| ! | CGTGTGCCGGTACGTATTCA+CGG | - | chr8_3:67184422-67184441 | Msa1303880:CDS | 55.0% |
| ! | TTTTCGGTCGGGTTCCGGTC+CGG | - | chr8_3:67180733-67180752 | Msa1303880:CDS | 60.0% |
| ATCTTCGGAATCGGCCGGAC+CGG | + | chr8_3:67180750-67180769 | None:intergenic | 60.0% | |
| GCAGTAAGCCAACGACCAGG+AGG | + | chr8_3:67180906-67180925 | None:intergenic | 60.0% | |
| GGTGCAGTAAGCCAACGACC+AGG | + | chr8_3:67180909-67180928 | None:intergenic | 60.0% | |
| !! | GGTATGGAAGGGAGCGTCCT+GGG | - | chr8_3:67182134-67182153 | Msa1303880:intron | 60.0% |
| !! | TGCCCCAGGGGCACTAGTTA+AGG | - | chr8_3:67183325-67183344 | Msa1303880:intron | 60.0% |
| GGCTTGCACAGACTCTTGCG+AGG | - | chr8_3:67183822-67183841 | Msa1303880:intron | 60.0% | |
| AAGACTGCACCTGGACGAGG+CGG | - | chr8_3:67184236-67184255 | Msa1303880:intron | 60.0% | |
| CTGGACGAGGCGGATATGTG+CGG | - | chr8_3:67184246-67184265 | Msa1303880:intron | 60.0% | |
| TGGCCATGGAGTTCGTGTGC+CGG | - | chr8_3:67184409-67184428 | Msa1303880:CDS | 60.0% | |
| ! | GTACCGGCACACGAACTCCA+TGG | + | chr8_3:67184415-67184434 | None:intergenic | 60.0% |
| !! | GGGTATGGAAGGGAGCGTCC+TGG | - | chr8_3:67182133-67182152 | Msa1303880:intron | 65.0% |
| GAGCGTCCTGGGCCTCGATA+TGG | - | chr8_3:67182145-67182164 | Msa1303880:intron | 65.0% | |
| GGGATTCTAGGCGGGGTGTG+AGG | - | chr8_3:67184210-67184229 | Msa1303880:intron | 65.0% | |
| CGCACATATCCGCCTCGTCC+AGG | + | chr8_3:67184248-67184267 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 67180660 | 67184664 | 67180660 | ID=Msa1303880;Name=Msa1303880 |
| chr8_3 | mRNA | 67180660 | 67184664 | 67180660 | ID=Msa1303880-mRNA-1;Parent=Msa1303880;Name=Msa1303880-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|5|0|424 |
| chr8_3 | exon | 67184332 | 67184664 | 67184332 | ID=Msa1303880-mRNA-1:exon:20523;Parent=Msa1303880-mRNA-1 |
| chr8_3 | exon | 67183143 | 67183233 | 67183143 | ID=Msa1303880-mRNA-1:exon:20522;Parent=Msa1303880-mRNA-1 |
| chr8_3 | exon | 67182194 | 67182364 | 67182194 | ID=Msa1303880-mRNA-1:exon:20521;Parent=Msa1303880-mRNA-1 |
| chr8_3 | exon | 67181338 | 67181491 | 67181338 | ID=Msa1303880-mRNA-1:exon:20520;Parent=Msa1303880-mRNA-1 |
| chr8_3 | exon | 67180660 | 67181185 | 67180660 | ID=Msa1303880-mRNA-1:exon:20519;Parent=Msa1303880-mRNA-1 |
| chr8_3 | CDS | 67184332 | 67184664 | 67184332 | ID=Msa1303880-mRNA-1:cds;Parent=Msa1303880-mRNA-1 |
| chr8_3 | CDS | 67183143 | 67183233 | 67183143 | ID=Msa1303880-mRNA-1:cds;Parent=Msa1303880-mRNA-1 |
| chr8_3 | CDS | 67182194 | 67182364 | 67182194 | ID=Msa1303880-mRNA-1:cds;Parent=Msa1303880-mRNA-1 |
| chr8_3 | CDS | 67181338 | 67181491 | 67181338 | ID=Msa1303880-mRNA-1:cds;Parent=Msa1303880-mRNA-1 |
| chr8_3 | CDS | 67180660 | 67181185 | 67180660 | ID=Msa1303880-mRNA-1:cds;Parent=Msa1303880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
