Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689660 | XP_003609980.3 | 91.087 | 460 | 5 | 2 | 1 | 424 | 34 | 493 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689660 | sp|A7PZL3|PGLR_VITVI | 43.564 | 404 | 190 | 5 | 43 | 409 | 64 | 466 | 4.06e-108 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689660 | A0A396IG09 | 91.087 | 460 | 5 | 2 | 1 | 424 | 34 | 493 | 0.0 | 845 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0689660 | 0.813777 | 2.155878e-51 | -8.615850e-47 |
| Msa0045620 | Msa0689660 | 0.807108 | 5.937821e-50 | -8.615850e-47 |
| Msa0050530 | Msa0689660 | 0.820329 | 7.267199e-53 | -8.615850e-47 |
| Msa0063190 | Msa0689660 | 0.801842 | 7.439407e-49 | -8.615850e-47 |
| Msa0100600 | Msa0689660 | 0.825233 | 5.240789e-54 | -8.615850e-47 |
| Msa0100890 | Msa0689660 | 0.814431 | 1.546503e-51 | -8.615850e-47 |
| Msa0108630 | Msa0689660 | 0.821284 | 4.381533e-53 | -8.615850e-47 |
| Msa0110240 | Msa0689660 | 0.802960 | 4.378153e-49 | -8.615850e-47 |
| Msa0630440 | Msa0689660 | 0.806996 | 6.271421e-50 | -8.615850e-47 |
| Msa0658120 | Msa0689660 | 0.819471 | 1.141353e-52 | -8.615850e-47 |
| Msa0687370 | Msa0689660 | 0.818707 | 1.702835e-52 | -8.615850e-47 |
| Msa0689660 | Msa0689830 | 0.811086 | 8.347286e-51 | -8.615850e-47 |
| Msa0689660 | Msa0702970 | 0.804806 | 1.810172e-49 | -8.615850e-47 |
| Msa0689660 | Msa0706690 | 0.813305 | 2.737827e-51 | -8.615850e-47 |
| Msa0689660 | Msa0752780 | 0.837562 | 4.829804e-57 | -8.615850e-47 |
| Msa0689660 | Msa0774060 | 0.813041 | 3.129008e-51 | -8.615850e-47 |
| Msa0689660 | Msa0811690 | 0.801060 | 1.075872e-48 | -8.615850e-47 |
| Msa0689660 | Msa0846900 | 0.817529 | 3.146167e-52 | -8.615850e-47 |
| Msa0689660 | Msa0900830 | 0.807255 | 5.526955e-50 | -8.615850e-47 |
| Msa0689660 | Msa0909260 | 0.800920 | 1.149260e-48 | -8.615850e-47 |
| Msa0689660 | Msa0921860 | 0.800109 | 1.681399e-48 | -8.615850e-47 |
| Msa0689660 | Msa0926310 | 0.810910 | 9.111990e-51 | -8.615850e-47 |
| Msa0689660 | Msa0945900 | 0.823478 | 1.355296e-53 | -8.615850e-47 |
| Msa0689660 | Msa0970040 | 0.812283 | 4.583220e-51 | -8.615850e-47 |
| Msa0689660 | Msa0970100 | 0.814369 | 1.595990e-51 | -8.615850e-47 |
| Msa0689660 | Msa0987670 | 0.819281 | 1.261155e-52 | -8.615850e-47 |
| Msa0689660 | Msa1000780 | 0.805263 | 1.452639e-49 | -8.615850e-47 |
| Msa0689660 | Msa1019090 | 0.814133 | 1.799092e-51 | -8.615850e-47 |
| Msa0689660 | Msa1019180 | 0.816611 | 5.057253e-52 | -8.615850e-47 |
| Msa0689660 | Msa1021560 | 0.814011 | 1.914048e-51 | -8.615850e-47 |
| Msa0689660 | Msa1050260 | 0.810800 | 9.625853e-51 | -8.615850e-47 |
| Msa0689660 | Msa1057620 | -0.831862 | 1.311863e-55 | -8.615850e-47 |
| Msa0689660 | Msa1073050 | 0.805785 | 1.128924e-49 | -8.615850e-47 |
| Msa0689660 | Msa1083380 | 0.808706 | 2.714557e-50 | -8.615850e-47 |
| Msa0689660 | Msa1104110 | 0.806025 | 1.005129e-49 | -8.615850e-47 |
| Msa0689660 | Msa1147700 | 0.831551 | 1.565296e-55 | -8.615850e-47 |
| Msa0689660 | Msa1148930 | 0.819670 | 1.027882e-52 | -8.615850e-47 |
| Msa0689660 | Msa1168310 | 0.809414 | 1.915073e-50 | -8.615850e-47 |
| Msa0689660 | Msa1190770 | 0.801388 | 9.220256e-49 | -8.615850e-47 |
| Msa0689660 | Msa1219930 | 0.915736 | 4.128520e-85 | -8.615850e-47 |
| Msa0689660 | Msa1226370 | 0.805559 | 1.258921e-49 | -8.615850e-47 |
| Msa0689660 | Msa1250660 | 0.802186 | 6.321710e-49 | -8.615850e-47 |
| Msa0689660 | Msa1283980 | 0.825938 | 3.567164e-54 | -8.615850e-47 |
| Msa0689660 | Msa1301980 | 0.809220 | 2.107010e-50 | -8.615850e-47 |
| Msa0689660 | Msa1303880 | 0.899978 | 1.159738e-77 | -8.615850e-47 |
| Msa0689660 | Msa1322980 | 0.813407 | 2.600627e-51 | -8.615850e-47 |
| Msa0689660 | Msa1343460 | 0.810553 | 1.088683e-50 | -8.615850e-47 |
| Msa0689660 | Msa1349690 | 0.834068 | 3.711545e-56 | -8.615850e-47 |
| Msa0689660 | Msa1352580 | 0.814109 | 1.821313e-51 | -8.615850e-47 |
| Msa0689660 | Msa1358290 | 0.800619 | 1.323747e-48 | -8.615850e-47 |
| Msa0689660 | Msa1363010 | 0.961225 | 1.864338e-119 | -8.615850e-47 |
| Msa0689660 | Msa1368170 | 0.804261 | 2.351026e-49 | -8.615850e-47 |
| Msa0689660 | Msa1371270 | 0.811117 | 8.216862e-51 | -8.615850e-47 |
| Msa0689660 | Msa1371800 | 0.804509 | 2.087297e-49 | -8.615850e-47 |
| Msa0689660 | Msa1376310 | 0.809455 | 1.876708e-50 | -8.615850e-47 |
| Msa0689660 | Msa1385570 | 0.820137 | 8.040200e-53 | -8.615850e-47 |
| Msa0689660 | Msa1392740 | 0.827194 | 1.790214e-54 | -8.615850e-47 |
| Msa0689660 | Msa1395050 | 0.806100 | 9.689265e-50 | -8.615850e-47 |
| Msa0689660 | Msa1420830 | 0.828879 | 7.033985e-55 | -8.615850e-47 |
| Msa0689660 | Msa1438510 | 0.817378 | 3.400991e-52 | -8.615850e-47 |
| Msa0689660 | Msa1462780 | 0.810988 | 8.764014e-51 | -8.615850e-47 |
| Msa0173250 | Msa0689660 | 0.801486 | 8.803761e-49 | -8.615850e-47 |
| Msa0192050 | Msa0689660 | 0.819429 | 1.166812e-52 | -8.615850e-47 |
| Msa0195230 | Msa0689660 | 0.813379 | 2.637497e-51 | -8.615850e-47 |
| Msa0195260 | Msa0689660 | 0.812379 | 4.366730e-51 | -8.615850e-47 |
| Msa0206370 | Msa0689660 | 0.802078 | 6.654507e-49 | -8.615850e-47 |
| Msa0219840 | Msa0689660 | 0.805733 | 1.157335e-49 | -8.615850e-47 |
| Msa0372100 | Msa0689660 | 0.817747 | 2.809636e-52 | -8.615850e-47 |
| Msa0384590 | Msa0689660 | 0.800001 | 1.768780e-48 | -8.615850e-47 |
| Msa0388250 | Msa0689660 | 0.821196 | 4.591009e-53 | -8.615850e-47 |
| Msa0401060 | Msa0689660 | 0.817544 | 3.120681e-52 | -8.615850e-47 |
| Msa0416210 | Msa0689660 | 0.830228 | 3.304904e-55 | -8.615850e-47 |
| Msa0433630 | Msa0689660 | 0.845128 | 4.927486e-59 | -8.615850e-47 |
| Msa0477480 | Msa0689660 | 0.806608 | 7.573210e-50 | -8.615850e-47 |
| Msa0279000 | Msa0689660 | 0.803066 | 4.162709e-49 | -8.615850e-47 |
| Msa0356640 | Msa0689660 | 0.834311 | 3.225291e-56 | -8.615850e-47 |
| Msa0495620 | Msa0689660 | 0.837607 | 4.704026e-57 | -8.615850e-47 |
| Msa0514540 | Msa0689660 | 0.807411 | 5.120692e-50 | -8.615850e-47 |
| Msa0521510 | Msa0689660 | 0.857565 | 1.497399e-62 | -8.615850e-47 |
| Msa0521530 | Msa0689660 | 0.830308 | 3.159579e-55 | -8.615850e-47 |
| Msa0566460 | Msa0689660 | 0.810283 | 1.245184e-50 | -8.615850e-47 |
| Msa0575950 | Msa0689660 | 0.815380 | 9.523243e-52 | -8.615850e-47 |
| Msa0579080 | Msa0689660 | 0.816190 | 6.284003e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689660 | MtrunA17_Chr4g0070281 | 91.087 | 460 | 5 | 2 | 1 | 424 | 34 | 493 | 0.0 | 845 |
| Msa0689660 | MtrunA17_Chr2g0301091 | 75.546 | 458 | 74 | 4 | 3 | 423 | 17 | 473 | 0.0 | 695 |
| Msa0689660 | MtrunA17_Chr7g0270821 | 44.340 | 424 | 192 | 5 | 34 | 416 | 35 | 455 | 1.57e-117 | 351 |
| Msa0689660 | MtrunA17_Chr8g0387391 | 43.325 | 397 | 188 | 5 | 36 | 396 | 38 | 433 | 1.56e-113 | 340 |
| Msa0689660 | MtrunA17_Chr1g0193961 | 44.335 | 406 | 181 | 6 | 34 | 401 | 35 | 433 | 8.08e-112 | 336 |
| Msa0689660 | MtrunA17_Chr1g0202651 | 43.622 | 392 | 184 | 4 | 44 | 399 | 57 | 447 | 3.02e-108 | 327 |
| Msa0689660 | MtrunA17_Chr7g0248451 | 43.257 | 393 | 186 | 5 | 43 | 399 | 56 | 447 | 4.08e-108 | 327 |
| Msa0689660 | MtrunA17_Chr7g0255311 | 44.584 | 397 | 180 | 6 | 44 | 401 | 65 | 460 | 2.47e-104 | 318 |
| Msa0689660 | MtrunA17_Chr2g0295241 | 38.741 | 413 | 214 | 5 | 25 | 399 | 17 | 428 | 1.26e-103 | 315 |
| Msa0689660 | MtrunA17_Chr3g0130251 | 43.029 | 416 | 184 | 8 | 26 | 401 | 66 | 468 | 4.99e-102 | 311 |
| Msa0689660 | MtrunA17_Chr4g0067811 | 39.356 | 404 | 209 | 3 | 32 | 400 | 30 | 432 | 1.25e-101 | 310 |
| Msa0689660 | MtrunA17_Chr1g0202641 | 43.622 | 392 | 184 | 5 | 44 | 399 | 557 | 947 | 1.92e-100 | 320 |
| Msa0689660 | MtrunA17_Chr1g0202641 | 42.132 | 394 | 191 | 5 | 44 | 401 | 57 | 449 | 1.12e-97 | 313 |
| Msa0689660 | MtrunA17_Chr3g0095221 | 41.844 | 423 | 202 | 8 | 27 | 412 | 36 | 451 | 8.78e-100 | 305 |
| Msa0689660 | MtrunA17_Chr8g0348491 | 39.430 | 421 | 208 | 7 | 38 | 422 | 51 | 460 | 1.16e-99 | 305 |
| Msa0689660 | MtrunA17_Chr1g0202621 | 41.451 | 386 | 195 | 4 | 44 | 399 | 50 | 434 | 3.15e-99 | 304 |
| Msa0689660 | MtrunA17_Chr5g0442221 | 43.672 | 403 | 186 | 6 | 36 | 399 | 38 | 438 | 7.59e-96 | 295 |
| Msa0689660 | MtrunA17_Chr2g0319881 | 48.299 | 147 | 65 | 2 | 34 | 170 | 35 | 180 | 2.05e-38 | 137 |
| Msa0689660 | MtrunA17_Chr2g0301101 | 45.205 | 146 | 26 | 4 | 3 | 146 | 29 | 122 | 3.19e-25 | 100 |
| Msa0689660 | MtrunA17_Chr6g0449961 | 24.623 | 398 | 245 | 12 | 36 | 403 | 39 | 411 | 2.94e-22 | 98.2 |
| Msa0689660 | MtrunA17_Chr6g0468871 | 53.425 | 73 | 34 | 0 | 199 | 271 | 21 | 93 | 5.56e-20 | 84.3 |
| Msa0689660 | MtrunA17_Chr5g0413141 | 22.398 | 442 | 271 | 13 | 1 | 394 | 13 | 430 | 2.51e-19 | 89.7 |
| Msa0689660 | MtrunA17_Chr7g0270361 | 24.862 | 362 | 226 | 15 | 41 | 368 | 66 | 415 | 2.53e-17 | 84.0 |
| Msa0689660 | MtrunA17_Chr8g0365901 | 23.529 | 408 | 244 | 16 | 40 | 407 | 63 | 442 | 2.71e-17 | 83.6 |
| Msa0689660 | MtrunA17_Chr5g0418411 | 25.731 | 342 | 189 | 13 | 42 | 345 | 29 | 343 | 4.02e-17 | 82.8 |
| Msa0689660 | MtrunA17_Chr1g0194231 | 25.613 | 367 | 218 | 16 | 41 | 368 | 80 | 430 | 1.42e-16 | 81.6 |
| Msa0689660 | MtrunA17_Chr1g0173451 | 22.927 | 410 | 250 | 15 | 41 | 414 | 75 | 454 | 9.48e-15 | 75.9 |
| Msa0689660 | MtrunA17_Chr4g0052621 | 24.259 | 371 | 218 | 14 | 40 | 368 | 63 | 412 | 5.16e-14 | 73.6 |
| Msa0689660 | MtrunA17_Chr3g0089021 | 22.760 | 413 | 247 | 13 | 23 | 393 | 52 | 434 | 1.07e-12 | 69.3 |
| Msa0689660 | MtrunA17_Chr3g0100091 | 23.675 | 283 | 164 | 8 | 139 | 391 | 80 | 340 | 2.22e-12 | 68.2 |
| Msa0689660 | MtrunA17_Chr2g0332801 | 23.192 | 401 | 231 | 15 | 42 | 396 | 59 | 428 | 1.88e-11 | 65.5 |
| Msa0689660 | MtrunA17_Chr2g0293681 | 25.843 | 356 | 207 | 11 | 30 | 347 | 55 | 391 | 2.42e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689660 | AT1G19170.1 | 69.936 | 469 | 93 | 5 | 3 | 423 | 37 | 505 | 0.0 | 665 |
| Msa0689660 | AT3G42950.1 | 68.017 | 469 | 103 | 4 | 2 | 423 | 15 | 483 | 0.0 | 654 |
| Msa0689660 | AT3G48950.1 | 42.651 | 415 | 200 | 5 | 44 | 421 | 47 | 460 | 1.76e-111 | 336 |
| Msa0689660 | AT3G62110.1 | 43.782 | 386 | 177 | 4 | 38 | 385 | 39 | 422 | 3.23e-107 | 325 |
| Msa0689660 | AT3G62110.2 | 43.782 | 386 | 177 | 4 | 38 | 385 | 39 | 422 | 3.23e-107 | 325 |
| Msa0689660 | AT3G61490.2 | 40.528 | 417 | 209 | 6 | 43 | 423 | 46 | 459 | 5.82e-104 | 317 |
| Msa0689660 | AT3G61490.3 | 40.528 | 417 | 209 | 6 | 43 | 423 | 46 | 459 | 5.82e-104 | 317 |
| Msa0689660 | AT3G61490.1 | 40.528 | 417 | 209 | 6 | 43 | 423 | 46 | 459 | 5.82e-104 | 317 |
| Msa0689660 | AT3G61490.5 | 40.528 | 417 | 209 | 6 | 43 | 423 | 61 | 474 | 6.63e-104 | 317 |
| Msa0689660 | AT4G23500.1 | 42.417 | 422 | 205 | 5 | 36 | 421 | 62 | 481 | 1.02e-103 | 317 |
| Msa0689660 | AT3G61490.4 | 40.528 | 417 | 209 | 6 | 43 | 423 | 159 | 572 | 4.41e-103 | 318 |
| Msa0689660 | AT5G41870.1 | 42.998 | 407 | 193 | 7 | 36 | 406 | 39 | 442 | 1.64e-102 | 312 |
| Msa0689660 | AT2G23900.1 | 41.476 | 393 | 192 | 5 | 44 | 399 | 58 | 449 | 2.38e-102 | 313 |
| Msa0689660 | AT4G23820.1 | 40.465 | 430 | 215 | 5 | 5 | 399 | 8 | 431 | 6.76e-102 | 310 |
| Msa0689660 | AT4G33440.1 | 43.627 | 408 | 191 | 5 | 40 | 412 | 70 | 473 | 1.74e-101 | 310 |
| Msa0689660 | AT3G06770.5 | 39.950 | 403 | 198 | 5 | 38 | 401 | 40 | 437 | 2.72e-99 | 304 |
| Msa0689660 | AT3G06770.2 | 39.950 | 403 | 198 | 5 | 38 | 401 | 39 | 436 | 3.11e-99 | 303 |
| Msa0689660 | AT5G49215.2 | 37.587 | 431 | 226 | 6 | 11 | 404 | 15 | 439 | 7.21e-97 | 297 |
| Msa0689660 | AT5G49215.1 | 37.587 | 431 | 226 | 6 | 11 | 404 | 17 | 441 | 7.81e-97 | 297 |
| Msa0689660 | AT3G16850.1 | 41.562 | 397 | 194 | 4 | 38 | 399 | 36 | 429 | 1.27e-95 | 295 |
| Msa0689660 | AT3G06770.1 | 38.544 | 371 | 184 | 5 | 70 | 401 | 2 | 367 | 4.67e-87 | 270 |
| Msa0689660 | AT3G06770.3 | 38.544 | 371 | 184 | 5 | 70 | 401 | 2 | 367 | 4.67e-87 | 270 |
| Msa0689660 | AT3G06770.4 | 34.957 | 349 | 180 | 6 | 95 | 401 | 6 | 349 | 1.97e-67 | 219 |
| Msa0689660 | AT1G56710.1 | 27.873 | 409 | 223 | 17 | 36 | 396 | 42 | 426 | 1.73e-23 | 102 |
| Msa0689660 | AT3G15720.2 | 27.701 | 361 | 199 | 14 | 41 | 368 | 22 | 353 | 4.23e-21 | 95.5 |
| Msa0689660 | AT3G15720.3 | 28.022 | 364 | 197 | 15 | 41 | 368 | 22 | 356 | 5.86e-21 | 95.1 |
| Msa0689660 | AT3G15720.1 | 28.022 | 364 | 197 | 15 | 41 | 368 | 23 | 357 | 6.41e-21 | 95.1 |
| Msa0689660 | AT1G80170.1 | 24.703 | 421 | 250 | 15 | 23 | 400 | 31 | 427 | 6.26e-19 | 89.0 |
| Msa0689660 | AT5G14650.1 | 23.020 | 404 | 243 | 15 | 41 | 404 | 50 | 425 | 7.48e-18 | 85.5 |
| Msa0689660 | AT1G48100.1 | 25.729 | 377 | 205 | 15 | 40 | 368 | 78 | 427 | 1.50e-17 | 85.1 |
| Msa0689660 | AT3G26610.1 | 22.850 | 407 | 246 | 11 | 33 | 394 | 58 | 441 | 5.03e-17 | 83.2 |
| Msa0689660 | AT1G23460.1 | 23.022 | 417 | 261 | 14 | 41 | 421 | 66 | 458 | 1.25e-16 | 82.0 |
| Msa0689660 | AT1G23460.2 | 23.022 | 417 | 261 | 14 | 41 | 421 | 42 | 434 | 1.37e-16 | 82.0 |
| Msa0689660 | AT2G41850.1 | 25.326 | 383 | 207 | 14 | 8 | 344 | 39 | 388 | 1.50e-16 | 81.6 |
| Msa0689660 | AT1G02460.1 | 26.075 | 372 | 213 | 14 | 41 | 368 | 88 | 441 | 3.12e-16 | 80.9 |
| Msa0689660 | AT5G44840.1 | 23.737 | 396 | 232 | 13 | 41 | 396 | 23 | 388 | 3.24e-16 | 80.5 |
| Msa0689660 | AT3G15720.4 | 30.233 | 258 | 140 | 10 | 137 | 368 | 50 | 293 | 4.62e-16 | 80.1 |
| Msa0689660 | AT5G44830.1 | 26.667 | 270 | 165 | 9 | 145 | 396 | 75 | 329 | 8.79e-16 | 78.6 |
| Msa0689660 | AT1G70500.1 | 23.077 | 390 | 241 | 13 | 41 | 394 | 66 | 432 | 1.65e-15 | 78.6 |
| Msa0689660 | AT4G01890.1 | 25.714 | 385 | 224 | 14 | 28 | 368 | 51 | 417 | 1.41e-14 | 75.9 |
| Msa0689660 | AT3G57790.2 | 24.516 | 310 | 162 | 10 | 40 | 300 | 33 | 319 | 3.96e-14 | 74.7 |
| Msa0689660 | AT3G57790.1 | 24.516 | 310 | 162 | 10 | 40 | 300 | 33 | 319 | 3.96e-14 | 74.7 |
| Msa0689660 | AT1G80140.1 | 27.240 | 279 | 163 | 12 | 145 | 396 | 70 | 335 | 1.62e-13 | 71.6 |
| Msa0689660 | AT5G27530.1 | 24.021 | 383 | 246 | 13 | 23 | 386 | 42 | 398 | 3.24e-13 | 71.6 |
Find 125 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCTGTCCTTGTCCATTTA+TGG | 0.154896 | 4_4:+56825396 | None:intergenic |
| TATGGTTGTTGGTGGGTTTA+TGG | 0.198875 | 4_4:-56827653 | Msa0689660:CDS |
| TTTGTACATGGCCGTGTAAT+AGG | 0.250601 | 4_4:-56823835 | Msa0689660:CDS |
| AAAGATGTGCTTCTTCTTGT+AGG | 0.280475 | 4_4:+56823867 | None:intergenic |
| GGGCATAATGGCACCATAAA+TGG | 0.292506 | 4_4:-56825409 | Msa0689660:CDS |
| AATCTATATCTGTTACATTC+TGG | 0.301959 | 4_4:+56823737 | None:intergenic |
| GATCAGTATGGAATTGCTTA+TGG | 0.314592 | 4_4:-56824458 | Msa0689660:CDS |
| GTTTCTGCTATATCTAAATT+CGG | 0.317289 | 4_4:-56827511 | Msa0689660:CDS |
| ATCTTCTTGTGTGGGATTCT+AGG | 0.317361 | 4_4:-56824170 | Msa0689660:CDS |
| ATATGGCTGGTAAGATTAAA+AGG | 0.322427 | 4_4:+56827436 | None:intergenic |
| TTGTATAGTTGAGACGCTTC+TGG | 0.326600 | 4_4:+56825356 | None:intergenic |
| CTCGCATGGAGATGGGAAAA+TGG | 0.361958 | 4_4:+56823810 | None:intergenic |
| ATAAGCTTCACCAGTGTCTA+TGG | 0.362272 | 4_4:-56823979 | Msa0689660:CDS |
| AAGCTTATGTCTCTTATAAC+TGG | 0.364953 | 4_4:+56823994 | None:intergenic |
| GAGCGTCCTGGGCCTCGATA+TGG | 0.368513 | 4_4:-56826221 | Msa0689660:CDS |
| TAGAGCGAACAACGAGGTTT+CGG | 0.369617 | 4_4:+56824411 | None:intergenic |
| AAACCTCGTTGTTCGCTCTA+TGG | 0.372844 | 4_4:-56824408 | Msa0689660:CDS |
| ATCTATATCTGTTACATTCT+GGG | 0.380122 | 4_4:+56823738 | None:intergenic |
| CGATATGGCAGTTTGATTCA+TGG | 0.394177 | 4_4:-56826206 | Msa0689660:intron |
| GACCAGGAGGAACATTCAAC+TGG | 0.395818 | 4_4:+56827473 | None:intergenic |
| CCATGATTGACAGGGCATAA+TGG | 0.414765 | 4_4:-56825421 | Msa0689660:intron |
| AAGAGTGGTTGGGATCAGTA+TGG | 0.421829 | 4_4:-56824470 | Msa0689660:CDS |
| TCTTGTGTGGGATTCTAGGC+GGG | 0.427041 | 4_4:-56824166 | Msa0689660:CDS |
| TTGTACATGGCCGTGTAATA+GGG | 0.427652 | 4_4:-56823834 | Msa0689660:CDS |
| ATGTGCGGCAAATAACTTAT+CGG | 0.434253 | 4_4:-56824107 | Msa0689660:CDS |
| GTAGGGTCATATCCATCATC+AGG | 0.436532 | 4_4:+56824024 | None:intergenic |
| GTTTCGGATCAATATATTCA+TGG | 0.446289 | 4_4:+56824427 | None:intergenic |
| GAAGGCAATGGAGGCATTAG+TGG | 0.446838 | 4_4:+56826260 | None:intergenic |
| ACCGGTCTCATCTTCGGAAT+CGG | 0.449026 | 4_4:+56827607 | None:intergenic |
| CTTGCTCATTGTACCGATCA+AGG | 0.450350 | 4_4:+56823785 | None:intergenic |
| TTTCTGCTATATCTAAATTC+GGG | 0.451005 | 4_4:-56827510 | Msa0689660:CDS |
| GAGCTAGAAAGAGAGTGATA+TGG | 0.460193 | 4_4:+56827419 | None:intergenic |
| TATGGATGGAGCGTCCAAAA+AGG | 0.462287 | 4_4:+56825265 | None:intergenic |
| ATCTTCGGAATCGGCCGGAC+CGG | 0.462711 | 4_4:+56827616 | None:intergenic |
| GGGTATGGAAGGGAGCGTCC+TGG | 0.464121 | 4_4:-56826233 | Msa0689660:CDS |
| ATGCCTCCATTGCCTTCGTA+TGG | 0.465957 | 4_4:-56826254 | Msa0689660:CDS |
| AAAACCACCGGTCTCATCTT+CGG | 0.472379 | 4_4:+56827601 | None:intergenic |
| CCATTGCCTTCGTATGGGTA+TGG | 0.477012 | 4_4:-56826248 | Msa0689660:CDS |
| GGTATGGAAGGGAGCGTCCT+GGG | 0.478476 | 4_4:-56826232 | Msa0689660:CDS |
| GTACAATGAGCAAGGACAAC+TGG | 0.482555 | 4_4:-56823776 | Msa0689660:CDS |
| CAATAGCAATAAAGAGTGGT+TGG | 0.485498 | 4_4:-56824481 | Msa0689660:CDS |
| TCAAGGTTCTCGCATGGAGA+TGG | 0.487309 | 4_4:+56823802 | None:intergenic |
| CGCACATATCCGCCTCGTCC+AGG | 0.489333 | 4_4:+56824123 | None:intergenic |
| TGAATGTTCCTCCTGGTCGT+TGG | 0.493807 | 4_4:-56827468 | Msa0689660:CDS |
| TTTCAGTGTGCATTTGTACA+TGG | 0.494342 | 4_4:-56823847 | Msa0689660:CDS |
| TACAATGAACACCCTGATGA+TGG | 0.498736 | 4_4:-56824036 | Msa0689660:CDS |
| TCGTTGTTCGCTCTATGGTC+AGG | 0.500862 | 4_4:-56824403 | Msa0689660:intron |
| ATATCTAAATTCGGGAAGAA+AGG | 0.501858 | 4_4:-56827502 | Msa0689660:CDS |
| CTTATAACTGGAAGTGCCGT+AGG | 0.502358 | 4_4:+56824006 | None:intergenic |
| AACAGTGCTGGTATCTCAAT+AGG | 0.503794 | 4_4:-56824234 | Msa0689660:intron |
| GCCCAGTTGAATGTTCCTCC+TGG | 0.506464 | 4_4:-56827475 | Msa0689660:CDS |
| AAGATTCTCCACCGTGACAT+TGG | 0.511289 | 4_4:+56824188 | None:intergenic |
| ATCTGTTACATTCTGGGACA+TGG | 0.514970 | 4_4:+56823744 | None:intergenic |
| CAAGGTTCTCGCATGGAGAT+GGG | 0.517048 | 4_4:+56823803 | None:intergenic |
| CGGTGGAGAATCTTCTTGTG+TGG | 0.518175 | 4_4:-56824179 | Msa0689660:CDS |
| TGCCTTCGTATGGGTATGGA+AGG | 0.520366 | 4_4:-56826244 | Msa0689660:CDS |
| CACCATAAATGGACAAGGAC+AGG | 0.524495 | 4_4:-56825398 | Msa0689660:CDS |
| AATAGCAATAAAGAGTGGTT+GGG | 0.528054 | 4_4:-56824480 | Msa0689660:CDS |
| TCTAAATTCGGGAAGAAAGG+TGG | 0.532571 | 4_4:-56827499 | Msa0689660:CDS |
| TCAATAGGCAGTGAGATGTC+TGG | 0.537106 | 4_4:-56824219 | Msa0689660:CDS |
| TTGCGAGGATATGTTGATAG+AGG | 0.543214 | 4_4:-56824531 | Msa0689660:CDS |
| TGGCCATGGAGTTCGTGTGC+CGG | 0.544487 | 4_4:-56823959 | Msa0689660:CDS |
| TGGCAGAGAAATATGGTTGT+TGG | 0.545952 | 4_4:-56827664 | Msa0689660:CDS |
| AGAAGCGTCTCAACTATACA+AGG | 0.547927 | 4_4:-56825354 | Msa0689660:CDS |
| TTCACCAGTGTCTATGGCCA+TGG | 0.553675 | 4_4:-56823973 | Msa0689660:CDS |
| GGTGGAGAATCTTCTTGTGT+GGG | 0.553858 | 4_4:-56824178 | Msa0689660:CDS |
| CTAAATTCGGGAAGAAAGGT+GGG | 0.555450 | 4_4:-56827498 | Msa0689660:CDS |
| AAACTGCCATATCGAGGCCC+AGG | 0.556888 | 4_4:+56826215 | None:intergenic |
| CGAAAAGTTACATTTCTCAC+AGG | 0.557026 | 4_4:+56823910 | None:intergenic |
| CGGATCAATATATTCATGGA+AGG | 0.557077 | 4_4:+56824431 | None:intergenic |
| ATAAAGACTGCACCTGGACG+AGG | 0.558213 | 4_4:-56824135 | Msa0689660:CDS |
| TGCCTCCATTGCCTTCGTAT+GGG | 0.559447 | 4_4:-56826253 | Msa0689660:CDS |
| GCTAACAGGATGAGAAGTAT+TGG | 0.559461 | 4_4:-56826283 | Msa0689660:intron |
| GTCTCATCTTCGGAATCGGC+CGG | 0.559511 | 4_4:+56827611 | None:intergenic |
| AACTCCATGGCCATAGACAC+TGG | 0.562611 | 4_4:+56823969 | None:intergenic |
| GGCCACTTGTTCAGATCATG+TGG | 0.563541 | 4_4:-56825330 | Msa0689660:CDS |
| TTCTTGTGTGGGATTCTAGG+CGG | 0.572910 | 4_4:-56824167 | Msa0689660:CDS |
| GGGATTCTAGGCGGGGTGTG+AGG | 0.573008 | 4_4:-56824158 | Msa0689660:CDS |
| GACCACATGATCTGAACAAG+TGG | 0.577629 | 4_4:+56825328 | None:intergenic |
| CTTGTGTGGGATTCTAGGCG+GGG | 0.583944 | 4_4:-56824165 | Msa0689660:CDS |
| CAGAGAAATATGGTTGTTGG+TGG | 0.585896 | 4_4:-56827661 | Msa0689660:CDS |
| GCCGATTCCGAAGATGAGAC+CGG | 0.586173 | 4_4:-56827608 | Msa0689660:CDS |
| CTCCATGCGAGAACCTTGAT+CGG | 0.593522 | 4_4:-56823798 | Msa0689660:CDS |
| TACCGATCAAGGTTCTCGCA+TGG | 0.601717 | 4_4:+56823796 | None:intergenic |
| CGTGTGCCGGTACGTATTCA+CGG | 0.606425 | 4_4:-56823946 | Msa0689660:CDS |
| GTGAGGATAAAGACTGCACC+TGG | 0.609634 | 4_4:-56824141 | Msa0689660:CDS |
| TAGAAAGAGAGTGATATGGC+TGG | 0.610232 | 4_4:+56827423 | None:intergenic |
| ACGTTTGAGAATGTCCGTGT+TGG | 0.610358 | 4_4:-56824078 | Msa0689660:CDS |
| AGAGAAATATGGTTGTTGGT+GGG | 0.613387 | 4_4:-56827660 | Msa0689660:CDS |
| AGTATGGAATTGCTTATGGA+AGG | 0.613405 | 4_4:-56824454 | Msa0689660:CDS |
| AGAGGACTGTTACATAAGCG+TGG | 0.614203 | 4_4:-56824513 | Msa0689660:CDS |
| CCATACCCATACGAAGGCAA+TGG | 0.614853 | 4_4:+56826248 | None:intergenic |
| TACCCATACGAAGGCAATGG+AGG | 0.617610 | 4_4:+56826251 | None:intergenic |
| TCACTACCGTGAATACGTAC+CGG | 0.621904 | 4_4:+56823940 | None:intergenic |
| TGATGATGGATATGACCCTA+CGG | 0.624117 | 4_4:-56824022 | Msa0689660:CDS |
| TTATAACTGGAAGTGCCGTA+GGG | 0.625551 | 4_4:+56824007 | None:intergenic |
| GAGGACTGTTACATAAGCGT+GGG | 0.628169 | 4_4:-56824512 | Msa0689660:CDS |
| GTACCGGCACACGAACTCCA+TGG | 0.628417 | 4_4:+56823956 | None:intergenic |
| ATAGGCAGTGAGATGTCTGG+TGG | 0.634420 | 4_4:-56824216 | Msa0689660:CDS |
| GGTGCAGTAAGCCAACGACC+AGG | 0.635900 | 4_4:+56827457 | None:intergenic |
| AAGCGTCTCAACTATACAAG+GGG | 0.641739 | 4_4:-56825352 | Msa0689660:CDS |
| CTGGACGAGGCGGATATGTG+CGG | 0.643013 | 4_4:-56824122 | Msa0689660:CDS |
| GAAGCGTCTCAACTATACAA+GGG | 0.652119 | 4_4:-56825353 | Msa0689660:CDS |
| CTTGATCGGTACAATGAGCA+AGG | 0.653027 | 4_4:-56823784 | Msa0689660:CDS |
| TGAATCAAACTGCCATATCG+AGG | 0.653937 | 4_4:+56826209 | None:intergenic |
| GGAAAATGGTCCCTATTACA+CGG | 0.656452 | 4_4:+56823824 | None:intergenic |
| GATGCAATAGCAATAAAGAG+TGG | 0.657676 | 4_4:-56824485 | Msa0689660:CDS |
| TAGGCAGTGAGATGTCTGGT+GGG | 0.661719 | 4_4:-56824215 | Msa0689660:CDS |
| GCCTTCGTATGGGTATGGAA+GGG | 0.661840 | 4_4:-56826243 | Msa0689660:CDS |
| TAAATTCGGGAAGAAAGGTG+GGG | 0.665836 | 4_4:-56827497 | Msa0689660:CDS |
| ACCAGGAGGAACATTCAACT+GGG | 0.666212 | 4_4:+56827474 | None:intergenic |
| TGGTGGGATATCCAATGTCA+CGG | 0.666291 | 4_4:-56824199 | Msa0689660:CDS |
| TCCCTTCCATACCCATACGA+AGG | 0.671608 | 4_4:+56826242 | None:intergenic |
| TAGGGTCATATCCATCATCA+GGG | 0.672022 | 4_4:+56824025 | None:intergenic |
| AAGACTGCACCTGGACGAGG+CGG | 0.675169 | 4_4:-56824132 | Msa0689660:CDS |
| ATGGACAAGGACAGGCATGG+TGG | 0.685955 | 4_4:-56825390 | Msa0689660:CDS |
| GGCTTGCACAGACTCTTGCG+AGG | 0.691384 | 4_4:-56824546 | Msa0689660:intron |
| TAAATGGACAAGGACAGGCA+TGG | 0.697306 | 4_4:-56825393 | Msa0689660:CDS |
| GATTCCGAAGATGAGACCGG+TGG | 0.698458 | 4_4:-56827605 | Msa0689660:CDS |
| GCAGTAAGCCAACGACCAGG+AGG | 0.722188 | 4_4:+56827460 | None:intergenic |
| AATGGCACCATAAATGGACA+AGG | 0.731657 | 4_4:-56825403 | Msa0689660:CDS |
| TCTTCATCACAATTCCAACA+CGG | 0.739063 | 4_4:+56824064 | None:intergenic |
| AGCGTCTCAACTATACAAGG+GGG | 0.750070 | 4_4:-56825351 | Msa0689660:CDS |
| TGGGATATCCAATGTCACGG+TGG | 0.786411 | 4_4:-56824196 | Msa0689660:CDS |
| TGACCATAGAGCGAACAACG+AGG | 0.809677 | 4_4:+56824405 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATGTTTTGATTTTAAATT+AGG | - | chr4_4:56824104-56824123 | Msa0689660:CDS | 10.0% |
| !!! | TTTCCTTATTTTTAATAATA+AGG | - | chr4_4:56826539-56826558 | Msa0689660:intron | 10.0% |
| !!! | TTACTTTTAAAATTAGCAAA+TGG | + | chr4_4:56824768-56824787 | None:intergenic | 15.0% |
| !!! | CTAATTTTAAAAGTAAGATA+GGG | - | chr4_4:56824772-56824791 | Msa0689660:intron | 15.0% |
| !!! | AATAGCAAATTTTTATATAG+TGG | + | chr4_4:56824907-56824926 | None:intergenic | 15.0% |
| !! | TGTAAAAACATTACAATAAA+AGG | - | chr4_4:56826191-56826210 | Msa0689660:intron | 15.0% |
| !! | AATCATAATATATGATAAGA+AGG | + | chr4_4:56827147-56827166 | None:intergenic | 15.0% |
| !! | TATAAAAACCGATAAAAATG+CGG | + | chr4_4:56823745-56823764 | None:intergenic | 20.0% |
| !!! | CATTTTTATCGGTTTTTATA+TGG | - | chr4_4:56823745-56823764 | Msa0689660:CDS | 20.0% |
| !! | ATATGTATGATAGAAGATTA+TGG | - | chr4_4:56824497-56824516 | Msa0689660:CDS | 20.0% |
| !!! | GCTAATTTTAAAAGTAAGAT+AGG | - | chr4_4:56824771-56824790 | Msa0689660:intron | 20.0% |
| !!! | TCTTGCTTTAAATTAGTTAA+AGG | - | chr4_4:56825289-56825308 | Msa0689660:CDS | 20.0% |
| !!! | CTTGCTTTAAATTAGTTAAA+GGG | - | chr4_4:56825290-56825309 | Msa0689660:CDS | 20.0% |
| !!! | ATTTTGCAATACAATCTATT+TGG | - | chr4_4:56825401-56825420 | Msa0689660:CDS | 20.0% |
| !!! | CAATTTTAGAAGTTTTGTAT+TGG | - | chr4_4:56825598-56825617 | Msa0689660:intron | 20.0% |
| !! | TTTCCTTTAATAAGGTTTAT+GGG | + | chr4_4:56825689-56825708 | None:intergenic | 20.0% |
| !!! | TTTTCCTTTAATAAGGTTTA+TGG | + | chr4_4:56825690-56825709 | None:intergenic | 20.0% |
| !! | TAAACCTTATTAAAGGAAAA+AGG | - | chr4_4:56825690-56825709 | Msa0689660:intron | 20.0% |
| !! | TATAAGATTAATGAAGGATT+CGG | + | chr4_4:56825747-56825766 | None:intergenic | 20.0% |
| !! | AATCAGTATAAGATTAATGA+AGG | + | chr4_4:56825753-56825772 | None:intergenic | 20.0% |
| !!! | AATAAAAGGTGTTACAATTT+TGG | - | chr4_4:56826205-56826224 | Msa0689660:intron | 20.0% |
| !!! | ATGAAATAAAGTTTTGTACT+TGG | + | chr4_4:56826292-56826311 | None:intergenic | 20.0% |
| !!! | CTGCCTTATTATTAAAAATA+AGG | + | chr4_4:56826545-56826564 | None:intergenic | 20.0% |
| !!! | CTTATTTTTAATAATAAGGC+AGG | - | chr4_4:56826543-56826562 | Msa0689660:intron | 20.0% |
| !!! | TCTTTTTTCTTCTATTTGTT+TGG | - | chr4_4:56826580-56826599 | Msa0689660:intron | 20.0% |
| !!! | TGTTAATGTGTCAATATTTT+CGG | - | chr4_4:56826615-56826634 | Msa0689660:intron | 20.0% |
| !! | CAATTATATACCATAAAGAT+AGG | - | chr4_4:56826781-56826800 | Msa0689660:intron | 20.0% |
| !! | TTAATAATCCCAAATTTCTA+TGG | - | chr4_4:56826862-56826881 | Msa0689660:intron | 20.0% |
| !! | TCATAAAAAAATATGCCAAA+AGG | + | chr4_4:56827097-56827116 | None:intergenic | 20.0% |
| !! | TTTTATATGGCAGAGAAATA+TGG | - | chr4_4:56823758-56823777 | Msa0689660:CDS | 25.0% |
| !!! | GTTTTTAATTTGACGGATTT+TGG | - | chr4_4:56823846-56823865 | Msa0689660:CDS | 25.0% |
| ! | GTTTCTGCTATATCTAAATT+CGG | - | chr4_4:56823918-56823937 | Msa0689660:CDS | 25.0% |
| ! | TTTCTGCTATATCTAAATTC+GGG | - | chr4_4:56823919-56823938 | Msa0689660:CDS | 25.0% |
| ! | AGAGTAAAAACTAACATCAA+TGG | + | chr4_4:56824054-56824073 | None:intergenic | 25.0% |
| ! | TATTGAATGTGTAGTAAGAT+TGG | - | chr4_4:56824228-56824247 | Msa0689660:CDS | 25.0% |
| ! | TAAAAAAGATGGTAGAAACT+TGG | - | chr4_4:56824307-56824326 | Msa0689660:intron | 25.0% |
| ! | TACAAGAGAAACTATTAAGA+AGG | - | chr4_4:56824440-56824459 | Msa0689660:CDS | 25.0% |
| ! | GGATTTAGAAATTAAAGAGT+TGG | - | chr4_4:56824461-56824480 | Msa0689660:CDS | 25.0% |
| ! | TAGAAATTAAAGAGTTGGAT+AGG | - | chr4_4:56824466-56824485 | Msa0689660:CDS | 25.0% |
| ! | AGAAATTAAAGAGTTGGATA+GGG | - | chr4_4:56824467-56824486 | Msa0689660:CDS | 25.0% |
| ! | TGTAATTCTATGTTTCTCTT+TGG | - | chr4_4:56825037-56825056 | Msa0689660:intron | 25.0% |
| ! | TAAAATGTTTAGTTACACGA+GGG | + | chr4_4:56825096-56825115 | None:intergenic | 25.0% |
| ! | ATAAAATGTTTAGTTACACG+AGG | + | chr4_4:56825097-56825116 | None:intergenic | 25.0% |
| ! | AGCTTAAGCATTAGAAATAT+TGG | + | chr4_4:56825531-56825550 | None:intergenic | 25.0% |
| ! | ATTTCTAATGCTTAAGCTAA+TGG | - | chr4_4:56825533-56825552 | Msa0689660:intron | 25.0% |
| ! | TTCCTTTAATAAGGTTTATG+GGG | + | chr4_4:56825688-56825707 | None:intergenic | 25.0% |
| !! | TAAGCCTTTTTCCTTTAATA+AGG | + | chr4_4:56825697-56825716 | None:intergenic | 25.0% |
| ! | TTATTAAAGGAAAAAGGCTT+AGG | - | chr4_4:56825696-56825715 | Msa0689660:intron | 25.0% |
| ! | TGATTAAGAAATCACTCTTA+AGG | - | chr4_4:56825772-56825791 | Msa0689660:intron | 25.0% |
| ! | GATTAAGAAATCACTCTTAA+GGG | - | chr4_4:56825773-56825792 | Msa0689660:intron | 25.0% |
| ! | CACTATTAAGGATAAATTCA+TGG | - | chr4_4:56825806-56825825 | Msa0689660:intron | 25.0% |
| !! | TTTTTCTTCTATTTGTTTGG+AGG | - | chr4_4:56826583-56826602 | Msa0689660:intron | 25.0% |
| !! | TTTTCTTCTATTTGTTTGGA+GGG | - | chr4_4:56826584-56826603 | Msa0689660:intron | 25.0% |
| !! | TATTTTTCTGCCTATCTTTA+TGG | + | chr4_4:56826794-56826813 | None:intergenic | 25.0% |
| ! | ATAGGCAGAAAAATATTACT+TGG | - | chr4_4:56826799-56826818 | Msa0689660:intron | 25.0% |
| ! | ATCTATATCTGTTACATTCT+GGG | + | chr4_4:56827694-56827713 | None:intergenic | 25.0% |
| ! | AATCTATATCTGTTACATTC+TGG | + | chr4_4:56827695-56827714 | None:intergenic | 25.0% |
| !!! | TTTAATTTGACGGATTTTGG+AGG | - | chr4_4:56823849-56823868 | Msa0689660:CDS | 30.0% |
| ATATCTAAATTCGGGAAGAA+AGG | - | chr4_4:56823927-56823946 | Msa0689660:CDS | 30.0% | |
| ATATGGCTGGTAAGATTAAA+AGG | + | chr4_4:56823996-56824015 | None:intergenic | 30.0% | |
| TAGGAAATTCATAATTGCTG+TGG | - | chr4_4:56824123-56824142 | Msa0689660:CDS | 30.0% | |
| AGTACCTATCGTAAAAAAGA+TGG | - | chr4_4:56824296-56824315 | Msa0689660:intron | 30.0% | |
| !!! | TCTACCATCTTTTTTACGAT+AGG | + | chr4_4:56824303-56824322 | None:intergenic | 30.0% |
| TGTATGATAGAAGATTATGG+CGG | - | chr4_4:56824500-56824519 | Msa0689660:CDS | 30.0% | |
| TACGAAGATGAAATTTCTGA+AGG | - | chr4_4:56824579-56824598 | Msa0689660:intron | 30.0% | |
| ACGAAGATGAAATTTCTGAA+GGG | - | chr4_4:56824580-56824599 | Msa0689660:intron | 30.0% | |
| ! | GTACATATTCCTGAGTTTTA+CGG | + | chr4_4:56824634-56824653 | None:intergenic | 30.0% |
| AGCAACTAATGAAATGTCTT+TGG | - | chr4_4:56824814-56824833 | Msa0689660:intron | 30.0% | |
| CAGCGAAATACATTATATAG+TGG | + | chr4_4:56824978-56824997 | None:intergenic | 30.0% | |
| CTTAAAGATGTTGTGATAAC+AGG | - | chr4_4:56825253-56825272 | Msa0689660:intron | 30.0% | |
| TGAACAAATATAAGTCAACC+AGG | + | chr4_4:56825580-56825599 | None:intergenic | 30.0% | |
| ! | GGAGTATTAGTAAACTATGT+TGG | + | chr4_4:56825631-56825650 | None:intergenic | 30.0% |
| ACCAAACTAAGATACATCAA+GGG | + | chr4_4:56825652-56825671 | None:intergenic | 30.0% | |
| TCCTTTAATAAGGTTTATGG+GGG | + | chr4_4:56825687-56825706 | None:intergenic | 30.0% | |
| AAATTCATGGATAACAATCC+AGG | - | chr4_4:56825819-56825838 | Msa0689660:intron | 30.0% | |
| AGTCATGTTATAGTCTATCT+TGG | + | chr4_4:56825892-56825911 | None:intergenic | 30.0% | |
| !! | GTAATGTTTTTACAGTCGTA+TGG | + | chr4_4:56826185-56826204 | None:intergenic | 30.0% |
| CGAATATAGTACGAATATCT+TGG | + | chr4_4:56826482-56826501 | None:intergenic | 30.0% | |
| ! | AGTCTCTGGATGATTAATTT+TGG | - | chr4_4:56826650-56826669 | Msa0689660:intron | 30.0% |
| CCTGATAAAGAATAACAGAA+AGG | + | chr4_4:56826752-56826771 | None:intergenic | 30.0% | |
| CCTTTCTGTTATTCTTTATC+AGG | - | chr4_4:56826749-56826768 | Msa0689660:intron | 30.0% | |
| !!! | ATCTATGCTTGTTTTGTTGT+TGG | - | chr4_4:56826829-56826848 | Msa0689660:intron | 30.0% |
| !!! | TCTATGCTTGTTTTGTTGTT+GGG | - | chr4_4:56826830-56826849 | Msa0689660:intron | 30.0% |
| AATAGCAATAAAGAGTGGTT+GGG | - | chr4_4:56826949-56826968 | Msa0689660:intron | 30.0% | |
| GTTTCGGATCAATATATTCA+TGG | + | chr4_4:56827005-56827024 | None:intergenic | 30.0% | |
| ! | AAAAATATGCCAAAAGGCAT+GGG | + | chr4_4:56827091-56827110 | None:intergenic | 30.0% |
| AAAAAATATGCCAAAAGGCA+TGG | + | chr4_4:56827092-56827111 | None:intergenic | 30.0% | |
| TTTATGAAATGAAACAGTGC+TGG | - | chr4_4:56827183-56827202 | Msa0689660:intron | 30.0% | |
| AAGCTTATGTCTCTTATAAC+TGG | + | chr4_4:56827438-56827457 | None:intergenic | 30.0% | |
| AGAGAAATATGGTTGTTGGT+GGG | - | chr4_4:56823769-56823788 | Msa0689660:CDS | 35.0% | |
| !!! | ACCGGTGGTTTTTAATTTGA+CGG | - | chr4_4:56823839-56823858 | Msa0689660:CDS | 35.0% |
| TCCGTCAAATTAAAAACCAC+CGG | + | chr4_4:56823843-56823862 | None:intergenic | 35.0% | |
| AACGACAATATTAGAGAGAG+AGG | - | chr4_4:56824267-56824286 | Msa0689660:intron | 35.0% | |
| ACAATATTAGAGAGAGAGGT+GGG | - | chr4_4:56824271-56824290 | Msa0689660:intron | 35.0% | |
| ! | AAACTTGGTTCAAGTGGTTT+TGG | - | chr4_4:56824322-56824341 | Msa0689660:intron | 35.0% |
| ! | TGAAATTTCTGAAGGGTACA+TGG | - | chr4_4:56824587-56824606 | Msa0689660:intron | 35.0% |
| ! | GAAATTTCTGAAGGGTACAT+GGG | - | chr4_4:56824588-56824607 | Msa0689660:intron | 35.0% |
| GACATTTCATTAGTTGCTAG+CGG | + | chr4_4:56824812-56824831 | None:intergenic | 35.0% | |
| TGACTCATTGTTGATCTCTT+TGG | - | chr4_4:56824996-56825015 | Msa0689660:intron | 35.0% | |
| AGACATGCATTGTAAGAAAC+AGG | + | chr4_4:56825067-56825086 | None:intergenic | 35.0% | |
| TACATTGTATCTGTCGTCTT+TGG | - | chr4_4:56825118-56825137 | Msa0689660:intron | 35.0% | |
| CTGAAGACCTTTATCATGAA+CGG | + | chr4_4:56825330-56825349 | None:intergenic | 35.0% | |
| ACAGAAATCTGAACATTTCC+TGG | - | chr4_4:56825559-56825578 | Msa0689660:intron | 35.0% | |
| TCCCTTGATGTATCTTAGTT+TGG | - | chr4_4:56825648-56825667 | Msa0689660:intron | 35.0% | |
| CACCAAACTAAGATACATCA+AGG | + | chr4_4:56825653-56825672 | None:intergenic | 35.0% | |
| ACCCCCATAAACCTTATTAA+AGG | - | chr4_4:56825683-56825702 | Msa0689660:intron | 35.0% | |
| TAAGAAATCACTCTTAAGGG+AGG | - | chr4_4:56825776-56825795 | Msa0689660:intron | 35.0% | |
| ! | CTAATCTATCTAGAGTATCC+TGG | + | chr4_4:56825840-56825859 | None:intergenic | 35.0% |
| !! | TAGAAGCAGTACTGATTAGA+AGG | - | chr4_4:56825857-56825876 | Msa0689660:intron | 35.0% |
| AAGCATTACATAGAGAAGGA+TGG | + | chr4_4:56825952-56825971 | None:intergenic | 35.0% | |
| TCCTTCTCTATGTAATGCTT+CGG | - | chr4_4:56825952-56825971 | Msa0689660:intron | 35.0% | |
| ATCTATTGCCATGATTGACA+GGG | - | chr4_4:56826000-56826019 | Msa0689660:intron | 35.0% | |
| !! | TGTTTTTACAGTCGTATGGA+TGG | + | chr4_4:56826181-56826200 | None:intergenic | 35.0% |
| TAGAATAGAAGATACTTGCC+AGG | + | chr4_4:56826269-56826288 | None:intergenic | 35.0% | |
| AAGAACTGATCAGAAACTAG+TGG | + | chr4_4:56826329-56826348 | None:intergenic | 35.0% | |
| CCTATAACTACTCAAGATAG+GGG | + | chr4_4:56826352-56826371 | None:intergenic | 35.0% | |
| CCCTATAACTACTCAAGATA+GGG | + | chr4_4:56826353-56826372 | None:intergenic | 35.0% | |
| CCCTATCTTGAGTAGTTATA+GGG | - | chr4_4:56826350-56826369 | Msa0689660:intron | 35.0% | |
| ACCCTATAACTACTCAAGAT+AGG | + | chr4_4:56826354-56826373 | None:intergenic | 35.0% | |
| TGTGCAAGCCATAGAAATTT+GGG | + | chr4_4:56826873-56826892 | None:intergenic | 35.0% | |
| GATGCAATAGCAATAAAGAG+TGG | - | chr4_4:56826944-56826963 | Msa0689660:intron | 35.0% | |
| CAATAGCAATAAAGAGTGGT+TGG | - | chr4_4:56826948-56826967 | Msa0689660:intron | 35.0% | |
| GATCAGTATGGAATTGCTTA+TGG | - | chr4_4:56826971-56826990 | Msa0689660:intron | 35.0% | |
| AGTATGGAATTGCTTATGGA+AGG | - | chr4_4:56826975-56826994 | Msa0689660:intron | 35.0% | |
| CGGATCAATATATTCATGGA+AGG | + | chr4_4:56827001-56827020 | None:intergenic | 35.0% | |
| ATGTGCGGCAAATAACTTAT+CGG | - | chr4_4:56827322-56827341 | Msa0689660:intron | 35.0% | |
| TCTTCATCACAATTCCAACA+CGG | + | chr4_4:56827368-56827387 | None:intergenic | 35.0% | |
| CGAAAAGTTACATTTCTCAC+AGG | + | chr4_4:56827522-56827541 | None:intergenic | 35.0% | |
| AAAGATGTGCTTCTTCTTGT+AGG | + | chr4_4:56827565-56827584 | None:intergenic | 35.0% | |
| TTTCAGTGTGCATTTGTACA+TGG | - | chr4_4:56827582-56827601 | Msa0689660:CDS | 35.0% | |
| ! | ATGGATCGCCGCATTTTTAT+CGG | - | chr4_4:56823734-56823753 | Msa0689660:CDS | 40.0% |
| TGGCAGAGAAATATGGTTGT+TGG | - | chr4_4:56823765-56823784 | Msa0689660:CDS | 40.0% | |
| CAGAGAAATATGGTTGTTGG+TGG | - | chr4_4:56823768-56823787 | Msa0689660:CDS | 40.0% | |
| !! | TATGGTTGTTGGTGGGTTTA+TGG | - | chr4_4:56823776-56823795 | Msa0689660:CDS | 40.0% |
| !!! | GTTGGTGGGTTTATGGTTTT+CGG | - | chr4_4:56823783-56823802 | Msa0689660:CDS | 40.0% |
| TCTAAATTCGGGAAGAAAGG+TGG | - | chr4_4:56823930-56823949 | Msa0689660:CDS | 40.0% | |
| CTAAATTCGGGAAGAAAGGT+GGG | - | chr4_4:56823931-56823950 | Msa0689660:CDS | 40.0% | |
| TAAATTCGGGAAGAAAGGTG+GGG | - | chr4_4:56823932-56823951 | Msa0689660:CDS | 40.0% | |
| TAGAAAGAGAGTGATATGGC+TGG | + | chr4_4:56824009-56824028 | None:intergenic | 40.0% | |
| GAGCTAGAAAGAGAGTGATA+TGG | + | chr4_4:56824013-56824032 | None:intergenic | 40.0% | |
| GACAATATTAGAGAGAGAGG+TGG | - | chr4_4:56824270-56824289 | Msa0689660:intron | 40.0% | |
| CAATATTAGAGAGAGAGGTG+GGG | - | chr4_4:56824272-56824291 | Msa0689660:intron | 40.0% | |
| TGGTAGAAACTTGGTTCAAG+TGG | - | chr4_4:56824316-56824335 | Msa0689660:intron | 40.0% | |
| !! | AGTAAGCAGTGTTGATCCTA+TGG | - | chr4_4:56824374-56824393 | Msa0689660:intron | 40.0% |
| !! | GTAAGCAGTGTTGATCCTAT+GGG | - | chr4_4:56824375-56824394 | Msa0689660:intron | 40.0% |
| !! | TAAGCAGTGTTGATCCTATG+GGG | - | chr4_4:56824376-56824395 | Msa0689660:intron | 40.0% |
| ACTAAGTGGGATCAGCTATA+TGG | + | chr4_4:56824534-56824553 | None:intergenic | 40.0% | |
| ATATAGCTGATCCCACTTAG+TGG | - | chr4_4:56824533-56824552 | Msa0689660:CDS | 40.0% | |
| TATAGCTGATCCCACTTAGT+GGG | - | chr4_4:56824534-56824553 | Msa0689660:CDS | 40.0% | |
| CAAACCTTATCCCACTAAGT+GGG | + | chr4_4:56824547-56824566 | None:intergenic | 40.0% | |
| ACATGATTGCCGTAAAACTC+AGG | - | chr4_4:56824622-56824641 | Msa0689660:intron | 40.0% | |
| ! | GCTAACAGGATGAGAAGTAT+TGG | - | chr4_4:56825146-56825165 | Msa0689660:intron | 40.0% |
| TGAATCAAACTGCCATATCG+AGG | + | chr4_4:56825223-56825242 | None:intergenic | 40.0% | |
| CGATATGGCAGTTTGATTCA+TGG | - | chr4_4:56825223-56825242 | Msa0689660:intron | 40.0% | |
| AGATGTTGTGATAACAGGCA+AGG | - | chr4_4:56825258-56825277 | Msa0689660:intron | 40.0% | |
| GTCTTCACCGTTCATGATAA+AGG | - | chr4_4:56825320-56825339 | Msa0689660:CDS | 40.0% | |
| GGAGGCTTAATGCACTATTA+AGG | - | chr4_4:56825794-56825813 | Msa0689660:intron | 40.0% | |
| TAGAGAAGGATGGAAAGCAA+AGG | + | chr4_4:56825942-56825961 | None:intergenic | 40.0% | |
| CATCTATTGCCATGATTGAC+AGG | - | chr4_4:56825999-56826018 | Msa0689660:intron | 40.0% | |
| AATGGCACCATAAATGGACA+AGG | - | chr4_4:56826026-56826045 | Msa0689660:intron | 40.0% | |
| TTGTATAGTTGAGACGCTTC+TGG | + | chr4_4:56826076-56826095 | None:intergenic | 40.0% | |
| !! | AGAAGCGTCTCAACTATACA+AGG | - | chr4_4:56826075-56826094 | Msa0689660:intron | 40.0% |
| ! | GAAGCGTCTCAACTATACAA+GGG | - | chr4_4:56826076-56826095 | Msa0689660:intron | 40.0% |
| AAGCGTCTCAACTATACAAG+GGG | - | chr4_4:56826077-56826096 | Msa0689660:intron | 40.0% | |
| ! | GTGTTTGGAGCTTCAAATAC+AGG | + | chr4_4:56826233-56826252 | None:intergenic | 40.0% |
| ! | TTTGAAGCTCCAAACACTGA+CGG | - | chr4_4:56826236-56826255 | Msa0689660:CDS | 40.0% |
| CCCCTATCTTGAGTAGTTAT+AGG | - | chr4_4:56826349-56826368 | Msa0689660:intron | 40.0% | |
| CTGTGCAAGCCATAGAAATT+TGG | + | chr4_4:56826874-56826893 | None:intergenic | 40.0% | |
| ! | TTGCGAGGATATGTTGATAG+AGG | - | chr4_4:56826898-56826917 | Msa0689660:intron | 40.0% |
| !! | AACAGTGCTGGTATCTCAAT+AGG | - | chr4_4:56827195-56827214 | Msa0689660:intron | 40.0% |
| ATCTTCTTGTGTGGGATTCT+AGG | - | chr4_4:56827259-56827278 | Msa0689660:intron | 40.0% | |
| TACAATGAACACCCTGATGA+TGG | - | chr4_4:56827393-56827412 | Msa0689660:CDS | 40.0% | |
| TAGGGTCATATCCATCATCA+GGG | + | chr4_4:56827407-56827426 | None:intergenic | 40.0% | |
| !! | TGATGATGGATATGACCCTA+CGG | - | chr4_4:56827407-56827426 | Msa0689660:CDS | 40.0% |
| !! | TTATAACTGGAAGTGCCGTA+GGG | + | chr4_4:56827425-56827444 | None:intergenic | 40.0% |
| ATAAGCTTCACCAGTGTCTA+TGG | - | chr4_4:56827450-56827469 | Msa0689660:CDS | 40.0% | |
| ! | ACTTTTCGTGACATGTCAGT+TGG | - | chr4_4:56827534-56827553 | Msa0689660:CDS | 40.0% |
| ! | CTTTTCGTGACATGTCAGTT+GGG | - | chr4_4:56827535-56827554 | Msa0689660:CDS | 40.0% |
| TTTGTACATGGCCGTGTAAT+AGG | - | chr4_4:56827594-56827613 | Msa0689660:CDS | 40.0% | |
| TTGTACATGGCCGTGTAATA+GGG | - | chr4_4:56827595-56827614 | Msa0689660:CDS | 40.0% | |
| GGAAAATGGTCCCTATTACA+CGG | + | chr4_4:56827608-56827627 | None:intergenic | 40.0% | |
| !! | ATCTGTTACATTCTGGGACA+TGG | + | chr4_4:56827688-56827707 | None:intergenic | 40.0% |
| ! | GTGGGTTTATGGTTTTCGGT+CGG | - | chr4_4:56823787-56823806 | Msa0689660:CDS | 45.0% |
| ! | TGGGTTTATGGTTTTCGGTC+GGG | - | chr4_4:56823788-56823807 | Msa0689660:CDS | 45.0% |
| AAAACCACCGGTCTCATCTT+CGG | + | chr4_4:56823831-56823850 | None:intergenic | 45.0% | |
| !!! | TTTGACGGATTTTGGAGGTG+TGG | - | chr4_4:56823854-56823873 | Msa0689660:CDS | 45.0% |
| !!! | TTGACGGATTTTGGAGGTGT+GGG | - | chr4_4:56823855-56823874 | Msa0689660:CDS | 45.0% |
| !! | ATTTTGGAGGTGTGGGTGAT+GGG | - | chr4_4:56823862-56823881 | Msa0689660:CDS | 45.0% |
| ACCAGGAGGAACATTCAACT+GGG | + | chr4_4:56823958-56823977 | None:intergenic | 45.0% | |
| GTGATTTGACTACTCCCCAT+AGG | + | chr4_4:56824393-56824412 | None:intergenic | 45.0% | |
| ATGGGGAGTAGTCAAATCAC+TGG | - | chr4_4:56824393-56824412 | Msa0689660:intron | 45.0% | |
| AGTAGTCAAATCACTGGAGG+CGG | - | chr4_4:56824399-56824418 | Msa0689660:intron | 45.0% | |
| TGATCCCACTTAGTGGGATA+AGG | - | chr4_4:56824540-56824559 | Msa0689660:intron | 45.0% | |
| CCAAACCTTATCCCACTAAG+TGG | + | chr4_4:56824548-56824567 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGGTT+TGG | - | chr4_4:56824545-56824564 | Msa0689660:intron | 45.0% | |
| GTATCTGTCGTCTTTGGTGA+CGG | - | chr4_4:56825124-56825143 | Msa0689660:intron | 45.0% | |
| ! | GCCGAAGCATTACATAGAGA+AGG | + | chr4_4:56825956-56825975 | None:intergenic | 45.0% |
| CCATTATGCCCTGTCAATCA+TGG | + | chr4_4:56826011-56826030 | None:intergenic | 45.0% | |
| CCATGATTGACAGGGCATAA+TGG | - | chr4_4:56826008-56826027 | Msa0689660:intron | 45.0% | |
| GGGCATAATGGCACCATAAA+TGG | - | chr4_4:56826020-56826039 | Msa0689660:intron | 45.0% | |
| CACCATAAATGGACAAGGAC+AGG | - | chr4_4:56826031-56826050 | Msa0689660:intron | 45.0% | |
| TGCCTGTCCTTGTCCATTTA+TGG | + | chr4_4:56826036-56826055 | None:intergenic | 45.0% | |
| TAAATGGACAAGGACAGGCA+TGG | - | chr4_4:56826036-56826055 | Msa0689660:intron | 45.0% | |
| AGCGTCTCAACTATACAAGG+GGG | - | chr4_4:56826078-56826097 | Msa0689660:intron | 45.0% | |
| GACCACATGATCTGAACAAG+TGG | + | chr4_4:56826104-56826123 | None:intergenic | 45.0% | |
| ! | CTCTACGTGACTCTCCTTTT+TGG | - | chr4_4:56826150-56826169 | Msa0689660:intron | 45.0% |
| ! | TATGGATGGAGCGTCCAAAA+AGG | + | chr4_4:56826167-56826186 | None:intergenic | 45.0% |
| TTTCCTTAACTAGTGCCCCT+GGG | + | chr4_4:56826392-56826411 | None:intergenic | 45.0% | |
| CGTTTCTTTAACTAGTGCCC+CGG | - | chr4_4:56826500-56826519 | Msa0689660:intron | 45.0% | |
| GTTTCTTTAACTAGTGCCCC+GGG | - | chr4_4:56826501-56826520 | Msa0689660:intron | 45.0% | |
| TTTCTTTAACTAGTGCCCCG+GGG | - | chr4_4:56826502-56826521 | Msa0689660:intron | 45.0% | |
| AAAATGCTAACTAGTGCCCC+CGG | + | chr4_4:56826522-56826541 | None:intergenic | 45.0% | |
| GGAGTGTGTCTTTAAGTCTC+TGG | - | chr4_4:56826636-56826655 | Msa0689660:intron | 45.0% | |
| AGAGGACTGTTACATAAGCG+TGG | - | chr4_4:56826916-56826935 | Msa0689660:intron | 45.0% | |
| GAGGACTGTTACATAAGCGT+GGG | - | chr4_4:56826917-56826936 | Msa0689660:intron | 45.0% | |
| AAGAGTGGTTGGGATCAGTA+TGG | - | chr4_4:56826959-56826978 | Msa0689660:intron | 45.0% | |
| TAGAGCGAACAACGAGGTTT+CGG | + | chr4_4:56827021-56827040 | None:intergenic | 45.0% | |
| AAACCTCGTTGTTCGCTCTA+TGG | - | chr4_4:56827021-56827040 | Msa0689660:intron | 45.0% | |
| TCAATAGGCAGTGAGATGTC+TGG | - | chr4_4:56827210-56827229 | Msa0689660:intron | 45.0% | |
| TGGTGGGATATCCAATGTCA+CGG | - | chr4_4:56827230-56827249 | Msa0689660:intron | 45.0% | |
| AAGATTCTCCACCGTGACAT+TGG | + | chr4_4:56827244-56827263 | None:intergenic | 45.0% | |
| GGTGGAGAATCTTCTTGTGT+GGG | - | chr4_4:56827251-56827270 | Msa0689660:intron | 45.0% | |
| TTCTTGTGTGGGATTCTAGG+CGG | - | chr4_4:56827262-56827281 | Msa0689660:intron | 45.0% | |
| ACGTTTGAGAATGTCCGTGT+TGG | - | chr4_4:56827351-56827370 | Msa0689660:intron | 45.0% | |
| GTAGGGTCATATCCATCATC+AGG | + | chr4_4:56827408-56827427 | None:intergenic | 45.0% | |
| !! | CTTATAACTGGAAGTGCCGT+AGG | + | chr4_4:56827426-56827445 | None:intergenic | 45.0% |
| TCACTACCGTGAATACGTAC+CGG | + | chr4_4:56827492-56827511 | None:intergenic | 45.0% | |
| ! | CTTGCTCATTGTACCGATCA+AGG | + | chr4_4:56827647-56827666 | None:intergenic | 45.0% |
| CTTGATCGGTACAATGAGCA+AGG | - | chr4_4:56827645-56827664 | Msa0689660:CDS | 45.0% | |
| GTACAATGAGCAAGGACAAC+TGG | - | chr4_4:56827653-56827672 | Msa0689660:CDS | 45.0% | |
| ! | TATGGTTTTCGGTCGGGTTC+CGG | - | chr4_4:56823794-56823813 | Msa0689660:CDS | 50.0% |
| ACCGGTCTCATCTTCGGAAT+CGG | + | chr4_4:56823825-56823844 | None:intergenic | 50.0% | |
| !! | GATTTTGGAGGTGTGGGTGA+TGG | - | chr4_4:56823861-56823880 | Msa0689660:CDS | 50.0% |
| !! | TTTTGGAGGTGTGGGTGATG+GGG | - | chr4_4:56823863-56823882 | Msa0689660:CDS | 50.0% |
| GACCAGGAGGAACATTCAAC+TGG | + | chr4_4:56823959-56823978 | None:intergenic | 50.0% | |
| TGAATGTTCCTCCTGGTCGT+TGG | - | chr4_4:56823961-56823980 | Msa0689660:CDS | 50.0% | |
| GGGAGTAGTCAAATCACTGG+AGG | - | chr4_4:56824396-56824415 | Msa0689660:intron | 50.0% | |
| TAGTTGCTAGCGGCTACAGT+CGG | + | chr4_4:56824802-56824821 | None:intergenic | 50.0% | |
| !! | GAAGGCAATGGAGGCATTAG+TGG | + | chr4_4:56825172-56825191 | None:intergenic | 50.0% |
| ATGCCTCCATTGCCTTCGTA+TGG | - | chr4_4:56825175-56825194 | Msa0689660:intron | 50.0% | |
| TGCCTCCATTGCCTTCGTAT+GGG | - | chr4_4:56825176-56825195 | Msa0689660:intron | 50.0% | |
| TACCCATACGAAGGCAATGG+AGG | + | chr4_4:56825181-56825200 | None:intergenic | 50.0% | |
| CCATACCCATACGAAGGCAA+TGG | + | chr4_4:56825184-56825203 | None:intergenic | 50.0% | |
| CCATTGCCTTCGTATGGGTA+TGG | - | chr4_4:56825181-56825200 | Msa0689660:intron | 50.0% | |
| TGCCTTCGTATGGGTATGGA+AGG | - | chr4_4:56825185-56825204 | Msa0689660:intron | 50.0% | |
| GCCTTCGTATGGGTATGGAA+GGG | - | chr4_4:56825186-56825205 | Msa0689660:intron | 50.0% | |
| TCCCTTCCATACCCATACGA+AGG | + | chr4_4:56825190-56825209 | None:intergenic | 50.0% | |
| GGCCACTTGTTCAGATCATG+TGG | - | chr4_4:56826099-56826118 | Msa0689660:intron | 50.0% | |
| GGATCTATGCCGTCAGTGTT+TGG | + | chr4_4:56826248-56826267 | None:intergenic | 50.0% | |
| AACACTGACGGCATAGATCC+TGG | - | chr4_4:56826248-56826267 | Msa0689660:CDS | 50.0% | |
| ! | TCATGCTAACTTGTGCCCCA+GGG | - | chr4_4:56826373-56826392 | Msa0689660:intron | 50.0% |
| TTCCTTAACTAGTGCCCCTG+GGG | + | chr4_4:56826391-56826410 | None:intergenic | 50.0% | |
| GTTTCCTTAACTAGTGCCCC+TGG | + | chr4_4:56826393-56826412 | None:intergenic | 50.0% | |
| TTCTTTAACTAGTGCCCCGG+GGG | - | chr4_4:56826503-56826522 | Msa0689660:intron | 50.0% | |
| AAATGCTAACTAGTGCCCCC+GGG | + | chr4_4:56826521-56826540 | None:intergenic | 50.0% | |
| TGACCATAGAGCGAACAACG+AGG | + | chr4_4:56827027-56827046 | None:intergenic | 50.0% | |
| TCGTTGTTCGCTCTATGGTC+AGG | - | chr4_4:56827026-56827045 | Msa0689660:intron | 50.0% | |
| !! | GGTACGGGTTAGTTGAGCTA+GGG | + | chr4_4:56827057-56827076 | None:intergenic | 50.0% |
| !! | AGGTACGGGTTAGTTGAGCT+AGG | + | chr4_4:56827058-56827077 | None:intergenic | 50.0% |
| CTAACCCGTACCTTTCTGCA+TGG | - | chr4_4:56827065-56827084 | Msa0689660:intron | 50.0% | |
| ATGGGCCATGCAGAAAGGTA+CGG | + | chr4_4:56827073-56827092 | None:intergenic | 50.0% | |
| ATAGGCAGTGAGATGTCTGG+TGG | - | chr4_4:56827213-56827232 | Msa0689660:intron | 50.0% | |
| TAGGCAGTGAGATGTCTGGT+GGG | - | chr4_4:56827214-56827233 | Msa0689660:intron | 50.0% | |
| TGGGATATCCAATGTCACGG+TGG | - | chr4_4:56827233-56827252 | Msa0689660:intron | 50.0% | |
| CGGTGGAGAATCTTCTTGTG+TGG | - | chr4_4:56827250-56827269 | Msa0689660:intron | 50.0% | |
| TCTTGTGTGGGATTCTAGGC+GGG | - | chr4_4:56827263-56827282 | Msa0689660:intron | 50.0% | |
| GTGAGGATAAAGACTGCACC+TGG | - | chr4_4:56827288-56827307 | Msa0689660:intron | 50.0% | |
| ATAAAGACTGCACCTGGACG+AGG | - | chr4_4:56827294-56827313 | Msa0689660:intron | 50.0% | |
| TTCACCAGTGTCTATGGCCA+TGG | - | chr4_4:56827456-56827475 | Msa0689660:CDS | 50.0% | |
| AACTCCATGGCCATAGACAC+TGG | + | chr4_4:56827463-56827482 | None:intergenic | 50.0% | |
| CTCGCATGGAGATGGGAAAA+TGG | + | chr4_4:56827622-56827641 | None:intergenic | 50.0% | |
| CAAGGTTCTCGCATGGAGAT+GGG | + | chr4_4:56827629-56827648 | None:intergenic | 50.0% | |
| TCAAGGTTCTCGCATGGAGA+TGG | + | chr4_4:56827630-56827649 | None:intergenic | 50.0% | |
| CTCCATGCGAGAACCTTGAT+CGG | - | chr4_4:56827631-56827650 | Msa0689660:CDS | 50.0% | |
| TACCGATCAAGGTTCTCGCA+TGG | + | chr4_4:56827636-56827655 | None:intergenic | 50.0% | |
| GTCTCATCTTCGGAATCGGC+CGG | + | chr4_4:56823821-56823840 | None:intergenic | 55.0% | |
| ! | GCCGATTCCGAAGATGAGAC+CGG | - | chr4_4:56823821-56823840 | Msa0689660:CDS | 55.0% |
| GATTCCGAAGATGAGACCGG+TGG | - | chr4_4:56823824-56823843 | Msa0689660:CDS | 55.0% | |
| GCCCAGTTGAATGTTCCTCC+TGG | - | chr4_4:56823954-56823973 | Msa0689660:CDS | 55.0% | |
| !! | CGTCTTTGGTGACGGCTAAC+AGG | - | chr4_4:56825132-56825151 | Msa0689660:intron | 55.0% |
| AAACTGCCATATCGAGGCCC+AGG | + | chr4_4:56825217-56825236 | None:intergenic | 55.0% | |
| ATGGACAAGGACAGGCATGG+TGG | - | chr4_4:56826039-56826058 | Msa0689660:intron | 55.0% | |
| ! | GTCATGCTAACTTGTGCCCC+AGG | - | chr4_4:56826372-56826391 | Msa0689660:intron | 55.0% |
| ! | CATGCTAACTTGTGCCCCAG+GGG | - | chr4_4:56826374-56826393 | Msa0689660:intron | 55.0% |
| AATGCTAACTAGTGCCCCCG+GGG | + | chr4_4:56826520-56826539 | None:intergenic | 55.0% | |
| ! | TGGGCCATGCAGAAAGGTAC+GGG | + | chr4_4:56827072-56827091 | None:intergenic | 55.0% |
| AAGGCATGGGCCATGCAGAA+AGG | + | chr4_4:56827078-56827097 | None:intergenic | 55.0% | |
| ! | TCTGCATGGCCCATGCCTTT+TGG | - | chr4_4:56827079-56827098 | Msa0689660:intron | 55.0% |
| CTTGTGTGGGATTCTAGGCG+GGG | - | chr4_4:56827264-56827283 | Msa0689660:intron | 55.0% | |
| ! | CGTGTGCCGGTACGTATTCA+CGG | - | chr4_4:56827483-56827502 | Msa0689660:CDS | 55.0% |
| ! | TTTTCGGTCGGGTTCCGGTC+CGG | - | chr4_4:56823799-56823818 | Msa0689660:CDS | 60.0% |
| ATCTTCGGAATCGGCCGGAC+CGG | + | chr4_4:56823816-56823835 | None:intergenic | 60.0% | |
| GCAGTAAGCCAACGACCAGG+AGG | + | chr4_4:56823972-56823991 | None:intergenic | 60.0% | |
| GGTGCAGTAAGCCAACGACC+AGG | + | chr4_4:56823975-56823994 | None:intergenic | 60.0% | |
| !! | GGTATGGAAGGGAGCGTCCT+GGG | - | chr4_4:56825197-56825216 | Msa0689660:intron | 60.0% |
| !! | TGCCCCAGGGGCACTAGTTA+AGG | - | chr4_4:56826386-56826405 | Msa0689660:intron | 60.0% |
| GGCTTGCACAGACTCTTGCG+AGG | - | chr4_4:56826883-56826902 | Msa0689660:intron | 60.0% | |
| AAGACTGCACCTGGACGAGG+CGG | - | chr4_4:56827297-56827316 | Msa0689660:intron | 60.0% | |
| CTGGACGAGGCGGATATGTG+CGG | - | chr4_4:56827307-56827326 | Msa0689660:intron | 60.0% | |
| TGGCCATGGAGTTCGTGTGC+CGG | - | chr4_4:56827470-56827489 | Msa0689660:CDS | 60.0% | |
| ! | GTACCGGCACACGAACTCCA+TGG | + | chr4_4:56827476-56827495 | None:intergenic | 60.0% |
| !! | GGGTATGGAAGGGAGCGTCC+TGG | - | chr4_4:56825196-56825215 | Msa0689660:intron | 65.0% |
| GAGCGTCCTGGGCCTCGATA+TGG | - | chr4_4:56825208-56825227 | Msa0689660:intron | 65.0% | |
| GGGATTCTAGGCGGGGTGTG+AGG | - | chr4_4:56827271-56827290 | Msa0689660:intron | 65.0% | |
| CGCACATATCCGCCTCGTCC+AGG | + | chr4_4:56827309-56827328 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 56823726 | 56827725 | 56823726 | ID=Msa0689660;Name=Msa0689660 |
| chr4_4 | mRNA | 56823726 | 56827725 | 56823726 | ID=Msa0689660-mRNA-1;Parent=Msa0689660;Name=Msa0689660-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|5|0|424 |
| chr4_4 | exon | 56827393 | 56827725 | 56827393 | ID=Msa0689660-mRNA-1:exon:15106;Parent=Msa0689660-mRNA-1 |
| chr4_4 | exon | 56826207 | 56826297 | 56826207 | ID=Msa0689660-mRNA-1:exon:15105;Parent=Msa0689660-mRNA-1 |
| chr4_4 | exon | 56825260 | 56825430 | 56825260 | ID=Msa0689660-mRNA-1:exon:15104;Parent=Msa0689660-mRNA-1 |
| chr4_4 | exon | 56824404 | 56824557 | 56824404 | ID=Msa0689660-mRNA-1:exon:15103;Parent=Msa0689660-mRNA-1 |
| chr4_4 | exon | 56823726 | 56824251 | 56823726 | ID=Msa0689660-mRNA-1:exon:15102;Parent=Msa0689660-mRNA-1 |
| chr4_4 | CDS | 56827393 | 56827725 | 56827393 | ID=Msa0689660-mRNA-1:cds;Parent=Msa0689660-mRNA-1 |
| chr4_4 | CDS | 56826207 | 56826297 | 56826207 | ID=Msa0689660-mRNA-1:cds;Parent=Msa0689660-mRNA-1 |
| chr4_4 | CDS | 56825260 | 56825430 | 56825260 | ID=Msa0689660-mRNA-1:cds;Parent=Msa0689660-mRNA-1 |
| chr4_4 | CDS | 56824404 | 56824557 | 56824404 | ID=Msa0689660-mRNA-1:cds;Parent=Msa0689660-mRNA-1 |
| chr4_4 | CDS | 56823726 | 56824251 | 56823726 | ID=Msa0689660-mRNA-1:cds;Parent=Msa0689660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
