Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307140 | XP_039685302.1 | 73.034 | 178 | 12 | 1 | 14 | 191 | 1 | 142 | 4.08e-82 | 250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307140 | sp|P40934|CYB5_BRAOB | 40.698 | 172 | 63 | 3 | 14 | 185 | 1 | 133 | 2.78e-40 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307140 | G7LAT8 | 73.034 | 178 | 12 | 1 | 14 | 191 | 1 | 142 | 1.95e-82 | 250 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023480 | Msa1307140 | 0.812509 | 4.091381e-51 | -8.615850e-47 |
| Msa0689320 | Msa1307140 | 0.804425 | 2.173444e-49 | -8.615850e-47 |
| Msa0808090 | Msa1307140 | 0.815394 | 9.456045e-52 | -8.615850e-47 |
| Msa0162630 | Msa1307140 | 0.818164 | 2.261544e-52 | -8.615850e-47 |
| Msa0232790 | Msa1307140 | 0.805898 | 1.068985e-49 | -8.615850e-47 |
| Msa1235460 | Msa1307140 | 0.800292 | 1.543544e-48 | -8.615850e-47 |
| Msa1258030 | Msa1307140 | -0.805547 | 1.266188e-49 | -8.615850e-47 |
| Msa1277410 | Msa1307140 | 0.869226 | 3.629992e-66 | -8.615850e-47 |
| Msa1307140 | Msa1307160 | 0.863498 | 2.385799e-64 | -8.615850e-47 |
| Msa1307140 | Msa1307180 | 0.860297 | 2.278310e-63 | -8.615850e-47 |
| Msa1307140 | Msa1316360 | 0.833198 | 6.122129e-56 | -8.615850e-47 |
| Msa1307140 | Msa1341060 | 0.818184 | 2.238228e-52 | -8.615850e-47 |
| Msa1307140 | Msa1382380 | -0.803623 | 3.191352e-49 | -8.615850e-47 |
| Msa1176170 | Msa1307140 | 0.859811 | 3.194092e-63 | -8.615850e-47 |
| Msa0485710 | Msa1307140 | 0.819938 | 8.929114e-53 | -8.615850e-47 |
| Msa0530300 | Msa1307140 | 0.826939 | 2.059551e-54 | -8.615850e-47 |
| Msa0881530 | Msa1307140 | -0.816138 | 6.453209e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307140 | MtrunA17_Chr8g0346311 | 73.034 | 178 | 12 | 1 | 14 | 191 | 1 | 142 | 5.61e-86 | 249 |
| Msa1307140 | MtrunA17_Chr3g0127451 | 43.023 | 172 | 59 | 2 | 14 | 185 | 1 | 133 | 1.70e-41 | 136 |
| Msa1307140 | MtrunA17_Chr7g0276081 | 44.318 | 176 | 61 | 2 | 16 | 191 | 4 | 142 | 1.44e-39 | 132 |
| Msa1307140 | MtrunA17_Chr4g0010061 | 37.356 | 174 | 70 | 4 | 14 | 187 | 14 | 148 | 1.35e-36 | 124 |
| Msa1307140 | MtrunA17_Chr5g0419651 | 42.857 | 126 | 35 | 4 | 14 | 139 | 1 | 89 | 8.50e-24 | 91.3 |
| Msa1307140 | MtrunA17_Chr3g0134591 | 30.909 | 110 | 65 | 2 | 82 | 185 | 32 | 136 | 1.30e-14 | 67.8 |
| Msa1307140 | MtrunA17_Chr3g0115131 | 29.861 | 144 | 60 | 4 | 18 | 161 | 516 | 618 | 8.43e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307140 | AT5G53560.1 | 39.535 | 172 | 65 | 3 | 14 | 185 | 1 | 133 | 8.89e-40 | 132 |
| Msa1307140 | AT5G48810.1 | 39.766 | 171 | 66 | 3 | 14 | 184 | 1 | 134 | 1.10e-38 | 130 |
| Msa1307140 | AT2G32720.1 | 41.520 | 171 | 61 | 4 | 14 | 184 | 1 | 132 | 2.20e-38 | 129 |
| Msa1307140 | AT2G32720.2 | 56.000 | 100 | 41 | 2 | 85 | 184 | 36 | 132 | 4.57e-32 | 112 |
| Msa1307140 | AT2G46650.1 | 37.952 | 166 | 64 | 4 | 21 | 185 | 5 | 132 | 2.71e-23 | 90.5 |
| Msa1307140 | AT1G26340.1 | 36.066 | 122 | 42 | 3 | 14 | 135 | 1 | 86 | 1.34e-20 | 83.6 |
Find 57 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATGTTACCCCATATTT+TGG | 0.127580 | 8_4:-2470432 | Msa1307140:CDS |
| CGGGATGATCATCCAAAATA+TGG | 0.239935 | 8_4:+2470420 | None:intergenic |
| GCATTTGCTCTTCAGTACTA+TGG | 0.296249 | 8_4:-2469686 | Msa1307140:CDS |
| CCTGGTGCCGTTGCTGATAT+TGG | 0.324237 | 8_4:-2469714 | Msa1307140:CDS |
| ATTCATTACTTAAGATTCAT+TGG | 0.334499 | 8_4:+2469649 | None:intergenic |
| AGAAGATTGATTGCTGCTTA+TGG | 0.334533 | 8_4:+2469763 | None:intergenic |
| ATCAGAGACTTTAACCTTTG+AGG | 0.335279 | 8_4:-2473996 | Msa1307140:CDS |
| TTCCAAATGGGTGGATTGGC+TGG | 0.372190 | 8_4:-2470951 | Msa1307140:CDS |
| GACTTTAACCTTTGAGGATG+TGG | 0.376866 | 8_4:-2473990 | Msa1307140:CDS |
| ATAAGCAGCAATCAATCTTC+TGG | 0.400727 | 8_4:-2469761 | Msa1307140:CDS |
| TGATGGAAAAGTACTATGTC+GGG | 0.401001 | 8_4:-2469853 | Msa1307140:CDS |
| CTGGTGCCGTTGCTGATATT+GGG | 0.414415 | 8_4:-2469713 | Msa1307140:CDS |
| CTTATGGTAGATGCTTGAAT+TGG | 0.417094 | 8_4:+2469779 | None:intergenic |
| GATGCTTGAATTGGTGCTGT+TGG | 0.425349 | 8_4:+2469788 | None:intergenic |
| CTGGATCATAGTCAACAAAA+AGG | 0.426357 | 8_4:-2473942 | Msa1307140:intron |
| AACCAGCCAATCCACCCATT+TGG | 0.427635 | 8_4:+2470949 | None:intergenic |
| CCAACTGTGCACCTTCCAAA+TGG | 0.434417 | 8_4:-2470964 | Msa1307140:CDS |
| GGATTGTTCTTAGCTGCTGC+TGG | 0.435494 | 8_4:+2469809 | None:intergenic |
| AATCTTGCAGTTGAAGAAGA+TGG | 0.435798 | 8_4:-2474026 | Msa1307140:intron |
| TAAGTAATGAATTTGAACTT+TGG | 0.441457 | 8_4:-2469638 | Msa1307140:three_prime_UTR |
| GACCAACGGATCTGCCTCTT+CGG | 0.448285 | 8_4:-2470922 | Msa1307140:CDS |
| GTGGCCAACATCTTCAAAAT+CGG | 0.455103 | 8_4:+2469895 | None:intergenic |
| CGCAATCTAGCATGAATAAG+AGG | 0.472461 | 8_4:+2469471 | None:intergenic |
| AAGTAAAGCCTCGTCACCTC+CGG | 0.474023 | 8_4:+2470400 | None:intergenic |
| ACAATAACAAGAACGATTGC+TGG | 0.477730 | 8_4:-2473961 | Msa1307140:CDS |
| CACCTTCCAAATGGGTGGAT+TGG | 0.484428 | 8_4:-2470955 | Msa1307140:CDS |
| GTTGAAGTTCTTGCAGTACC+TGG | 0.488377 | 8_4:-2469732 | Msa1307140:CDS |
| GGGATGATCATCCAAAATAT+GGG | 0.498835 | 8_4:+2470421 | None:intergenic |
| TAATAATCTATATCAACATA+AGG | 0.507284 | 8_4:-2469574 | Msa1307140:three_prime_UTR |
| GAGGCTTTACTTTCTGCTAC+AGG | 0.508240 | 8_4:-2470389 | Msa1307140:intron |
| CCAATATCAGCAACGGCACC+AGG | 0.516481 | 8_4:+2469714 | None:intergenic |
| ATCTTGCAGTTGAAGAAGAT+GGG | 0.518015 | 8_4:-2474025 | Msa1307140:intron |
| CAACTGTGCACCTTCCAAAT+GGG | 0.518079 | 8_4:-2470963 | Msa1307140:CDS |
| CCATTTGGAAGGTGCACAGT+TGG | 0.521937 | 8_4:+2470964 | None:intergenic |
| TGACTCGGCAACAGAGATGA+TGG | 0.533371 | 8_4:-2469870 | Msa1307140:CDS |
| ATGATGGAAAAGTACTATGT+CGG | 0.538408 | 8_4:-2469854 | Msa1307140:CDS |
| AGGTGCACAGTTGGCGACAT+GGG | 0.548895 | 8_4:+2470973 | None:intergenic |
| AGTAAAGCCTCGTCACCTCC+GGG | 0.550723 | 8_4:+2470401 | None:intergenic |
| AGCTGCTGCTGGAAGAGTGT+TGG | 0.552849 | 8_4:+2469820 | None:intergenic |
| GAGATATTATATCAGAGTCA+TGG | 0.553803 | 8_4:+2469447 | None:intergenic |
| TTGGCGACATGGGAATCAGC+AGG | 0.571322 | 8_4:+2470983 | None:intergenic |
| GACCGAAGAGGCAGATCCGT+TGG | 0.573244 | 8_4:+2470920 | None:intergenic |
| GTGCTTAGCCACATCCTCAA+AGG | 0.580670 | 8_4:+2473982 | None:intergenic |
| AGCCAATCCACCCATTTGGA+AGG | 0.590548 | 8_4:+2470953 | None:intergenic |
| AGATGTTGGCCACAGTGACT+CGG | 0.590642 | 8_4:-2469885 | Msa1307140:CDS |
| AAGGTGCACAGTTGGCGACA+TGG | 0.595693 | 8_4:+2470972 | None:intergenic |
| TGAATGAAGGCAATGGCTCA+AGG | 0.597220 | 8_4:-2477854 | None:intergenic |
| TGATCATCCCGGAGGTGACG+AGG | 0.599942 | 8_4:-2470408 | Msa1307140:CDS |
| CTGTGCACCTTCCAAATGGG+TGG | 0.613389 | 8_4:-2470960 | Msa1307140:CDS |
| TTGGCTGGTTTATAGACCAA+CGG | 0.615480 | 8_4:-2470936 | Msa1307140:CDS |
| GCCAACATCTTCAAAATCGG+TGG | 0.624406 | 8_4:+2469898 | None:intergenic |
| GCAGATCCCAATATCAGCAA+CGG | 0.642745 | 8_4:+2469707 | None:intergenic |
| GGATGATCATCCAAAATATG+GGG | 0.664806 | 8_4:+2470422 | None:intergenic |
| TGTTACTGATGGGACCGAAG+AGG | 0.687981 | 8_4:+2470908 | None:intergenic |
| GATGGAAAAGTACTATGTCG+GGG | 0.689368 | 8_4:-2469852 | Msa1307140:CDS |
| TCTCTGTTGCCGAGTCACTG+TGG | 0.717695 | 8_4:+2469876 | None:intergenic |
| GGAAAAGTACTATGTCGGGG+AGG | 0.724893 | 8_4:-2469849 | Msa1307140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAATATATTTTATTTT+GGG | + | chr8_4:2475638-2475657 | None:intergenic | 0.0% |
| !!! | ATATTAAATATATTTTATTT+TGG | + | chr8_4:2475639-2475658 | None:intergenic | 0.0% |
| !!! | CAAATAAATTTATTTTTGTT+TGG | + | chr8_4:2470198-2470217 | None:intergenic | 10.0% |
| !! | GAATTGAAAAAAATTAATTT+GGG | + | chr8_4:2470369-2470388 | None:intergenic | 10.0% |
| !! | TGAATTGAAAAAAATTAATT+TGG | + | chr8_4:2470370-2470389 | None:intergenic | 10.0% |
| !!! | AATTAATTTTTTTCAATTCA+TGG | - | chr8_4:2470370-2470389 | Msa1307140:intron | 10.0% |
| !!! | ATCATATATTATGAAATTTT+TGG | - | chr8_4:2470576-2470595 | Msa1307140:intron | 10.0% |
| !!! | TCATATATTATGAAATTTTT+GGG | - | chr8_4:2470577-2470596 | Msa1307140:intron | 10.0% |
| !! | AATTTAAAAATTGCATTATT+TGG | + | chr8_4:2471108-2471127 | None:intergenic | 10.0% |
| !!! | TTTTAATTTATCTATTAAGT+GGG | + | chr8_4:2471262-2471281 | None:intergenic | 10.0% |
| !!! | TTTTTAATTTATCTATTAAG+TGG | + | chr8_4:2471263-2471282 | None:intergenic | 10.0% |
| !!! | AAAAATGATTTAAAATTACA+AGG | + | chr8_4:2471369-2471388 | None:intergenic | 10.0% |
| !!! | TACGATATTTATTTTTTTTT+TGG | - | chr8_4:2471953-2471972 | Msa1307140:intron | 10.0% |
| !! | TGTTTAAAAAAACATTTATT+TGG | - | chr8_4:2472009-2472028 | Msa1307140:intron | 10.0% |
| !!! | TAAAATCTGATTATTTTTTT+TGG | - | chr8_4:2473009-2473028 | Msa1307140:intron | 10.0% |
| !!! | AAAATCTGATTATTTTTTTT+GGG | - | chr8_4:2473010-2473029 | Msa1307140:intron | 10.0% |
| !! | TTATTGTAGTTAAAAAAAAT+TGG | - | chr8_4:2474386-2474405 | Msa1307140:intron | 10.0% |
| !! | TATTGTAGTTAAAAAAAATT+GGG | - | chr8_4:2474387-2474406 | Msa1307140:intron | 10.0% |
| !!! | TACTGTTTTTTTTTTTTTTT+GGG | + | chr8_4:2475569-2475588 | None:intergenic | 10.0% |
| !! | AAGTAATGAAATTTATATTT+AGG | - | chr8_4:2476457-2476476 | Msa1307140:intron | 10.0% |
| !!! | CTAAATAATCATTTGATTTT+AGG | - | chr8_4:2469559-2469578 | Msa1307140:three_prime_UTR | 15.0% |
| !!! | TGTTTTTAAGATAAATAGAT+AGG | - | chr8_4:2469831-2469850 | Msa1307140:CDS | 15.0% |
| !!! | TCTAAAAATTTTACAAAAAG+AGG | + | chr8_4:2470500-2470519 | None:intergenic | 15.0% |
| !!! | ACTATTTTTTACTAAGAATT+TGG | - | chr8_4:2470868-2470887 | Msa1307140:intron | 15.0% |
| !! | ATAAAAAAAAATTCAACTGA+TGG | + | chr8_4:2471400-2471419 | None:intergenic | 15.0% |
| !! | AACAACCAAAAAAAATTAAT+AGG | + | chr8_4:2471717-2471736 | None:intergenic | 15.0% |
| !! | AAATTTATTATCGAAGAAAT+TGG | - | chr8_4:2471754-2471773 | Msa1307140:intron | 15.0% |
| !! | TATTTATTATCCAAGAAAAT+TGG | - | chr8_4:2471838-2471857 | Msa1307140:intron | 15.0% |
| !! | ATTTATTATCCAAGAAAATT+GGG | - | chr8_4:2471839-2471858 | Msa1307140:intron | 15.0% |
| !!! | AATTCTATTTTAGTTGAAAA+TGG | - | chr8_4:2471882-2471901 | Msa1307140:intron | 15.0% |
| !!! | ATTCTATTTTAGTTGAAAAT+GGG | - | chr8_4:2471883-2471902 | Msa1307140:intron | 15.0% |
| !! | AAATTATGATGTATTATGTA+AGG | - | chr8_4:2472092-2472111 | Msa1307140:intron | 15.0% |
| !! | AATTATGATGTATTATGTAA+GGG | - | chr8_4:2472093-2472112 | Msa1307140:intron | 15.0% |
| !!! | TACTTTTTTTTTTTTACTAC+TGG | - | chr8_4:2472226-2472245 | Msa1307140:intron | 15.0% |
| !!! | AAATATGATCAAAATTTGTT+AGG | + | chr8_4:2472469-2472488 | None:intergenic | 15.0% |
| !!! | AGTTTGTTTTTTTTGTATTT+TGG | - | chr8_4:2472738-2472757 | Msa1307140:intron | 15.0% |
| !! | AAAAACTAAATTGGAATAAA+AGG | + | chr8_4:2473755-2473774 | None:intergenic | 15.0% |
| !!! | ATAAATTTATACTCTTTTTG+AGG | + | chr8_4:2474068-2474087 | None:intergenic | 15.0% |
| !! | ATTGTAGTTAAAAAAAATTG+GGG | - | chr8_4:2474388-2474407 | Msa1307140:intron | 15.0% |
| !!! | AATATGTTTTGATAATTAGA+CGG | + | chr8_4:2474594-2474613 | None:intergenic | 15.0% |
| !!! | TTTTTTAAACATAAGTATTG+TGG | - | chr8_4:2474953-2474972 | Msa1307140:intron | 15.0% |
| !! | TTTAAATTAGTAAACTCTTA+TGG | - | chr8_4:2475072-2475091 | Msa1307140:intron | 15.0% |
| !! | TTAAATTAGTAAACTCTTAT+GGG | - | chr8_4:2475073-2475092 | Msa1307140:intron | 15.0% |
| !!! | CTACTGTTTTTTTTTTTTTT+TGG | + | chr8_4:2475570-2475589 | None:intergenic | 15.0% |
| !!! | TTTCTGTTTTTTTTCTTTTT+CGG | - | chr8_4:2475731-2475750 | Msa1307140:intron | 15.0% |
| !!! | AGAGATTTTAAAAAGTAAAT+AGG | + | chr8_4:2475898-2475917 | None:intergenic | 15.0% |
| !! | TATAAATTTATGTTGTTAGA+TGG | - | chr8_4:2476398-2476417 | Msa1307140:intron | 15.0% |
| !! | TAATAATCTATATCAACATA+AGG | - | chr8_4:2477564-2477583 | Msa1307140:intron | 15.0% |
| !!! | ATATCTCAAATATTTTGAAA+TGG | - | chr8_4:2477707-2477726 | Msa1307140:intron | 15.0% |
| !! | ATATTATCATTTACTTGTGA+TGG | - | chr8_4:2469371-2469390 | Msa1307140:three_prime_UTR | 20.0% |
| !! | CTATTTATCTTAAAAACAGA+AGG | + | chr8_4:2469829-2469848 | None:intergenic | 20.0% |
| !! | AAGATAAATAGATAGGTATA+TGG | - | chr8_4:2469838-2469857 | Msa1307140:CDS | 20.0% |
| !! | AATAATACTAAGTGAATGTT+TGG | + | chr8_4:2470290-2470309 | None:intergenic | 20.0% |
| !!! | AAAAAATTAATTTGGGAAAC+AGG | + | chr8_4:2470362-2470381 | None:intergenic | 20.0% |
| !!! | ATGAAATTTTTGGGTTTATT+TGG | - | chr8_4:2470586-2470605 | Msa1307140:intron | 20.0% |
| !!! | TATATGGTTGATGTTTAATT+TGG | - | chr8_4:2470842-2470861 | Msa1307140:intron | 20.0% |
| !!! | ACACCACTATTTTTTATTAA+AGG | - | chr8_4:2470892-2470911 | Msa1307140:intron | 20.0% |
| !!! | CACCACTATTTTTTATTAAA+GGG | - | chr8_4:2470893-2470912 | Msa1307140:intron | 20.0% |
| !! | TTCCCTTTAATAAAAAATAG+TGG | + | chr8_4:2470898-2470917 | None:intergenic | 20.0% |
| !! | AAAATTACTAATGTTTCAAC+TGG | + | chr8_4:2470968-2470987 | None:intergenic | 20.0% |
| !!! | TTTGTTTGCTTCAAAAATTT+TGG | + | chr8_4:2471010-2471029 | None:intergenic | 20.0% |
| !!! | AAAATTTTTGAAGCAAACAA+AGG | - | chr8_4:2471009-2471028 | Msa1307140:intron | 20.0% |
| !!! | TAACGAAACAATCTTTTAAT+GGG | + | chr8_4:2471197-2471216 | None:intergenic | 20.0% |
| !!! | ATAACGAAACAATCTTTTAA+TGG | + | chr8_4:2471198-2471217 | None:intergenic | 20.0% |
| !!! | TTTTATGAAGTCTTGTATTT+TGG | - | chr8_4:2471414-2471433 | Msa1307140:intron | 20.0% |
| !!! | TGTATAGAATATTTGGATTT+TGG | - | chr8_4:2471552-2471571 | Msa1307140:intron | 20.0% |
| !!! | GTATAGAATATTTGGATTTT+GGG | - | chr8_4:2471553-2471572 | Msa1307140:intron | 20.0% |
| !!! | TATAGAATATTTGGATTTTG+GGG | - | chr8_4:2471554-2471573 | Msa1307140:intron | 20.0% |
| !!! | TCCTATATCATTTAAAGTTT+GGG | + | chr8_4:2471607-2471626 | None:intergenic | 20.0% |
| !!! | TTCCTATATCATTTAAAGTT+TGG | + | chr8_4:2471608-2471627 | None:intergenic | 20.0% |
| !! | AACTTTAAATGATATAGGAA+TGG | - | chr8_4:2471608-2471627 | Msa1307140:intron | 20.0% |
| !!! | CTGAAATCTGTTAATATTTT+TGG | - | chr8_4:2471631-2471650 | Msa1307140:intron | 20.0% |
| !! | ATATAACAAATCCACTAAAA+GGG | + | chr8_4:2471657-2471676 | None:intergenic | 20.0% |
| !! | TATATAACAAATCCACTAAA+AGG | + | chr8_4:2471658-2471677 | None:intergenic | 20.0% |
| !! | ACCAAAAAAAATTAATAGGA+GGG | + | chr8_4:2471713-2471732 | None:intergenic | 20.0% |
| !! | AACCAAAAAAAATTAATAGG+AGG | + | chr8_4:2471714-2471733 | None:intergenic | 20.0% |
| !!! | AGAAATTGGTCATATTTTTT+TGG | - | chr8_4:2471768-2471787 | Msa1307140:intron | 20.0% |
| !!! | TTCTATTTTAGTTGAAAATG+GGG | - | chr8_4:2471884-2471903 | Msa1307140:intron | 20.0% |
| !! | TTAGGCATAATATGAAAAAA+GGG | + | chr8_4:2472119-2472138 | None:intergenic | 20.0% |
| !! | AGTTTAAAAGGTAACTATAA+TGG | + | chr8_4:2472194-2472213 | None:intergenic | 20.0% |
| !! | CACGTTATATTATCTAATAT+AGG | + | chr8_4:2472425-2472444 | None:intergenic | 20.0% |
| !! | AATATTACTAGATTTATGCA+TGG | + | chr8_4:2472867-2472886 | None:intergenic | 20.0% |
| !!! | TTATGTTATTGTCTAGTTTT+TGG | - | chr8_4:2473545-2473564 | Msa1307140:intron | 20.0% |
| !! | TAAATTGGAATAAAAGGTTA+TGG | + | chr8_4:2473749-2473768 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTTTTTTTGGCT+TGG | - | chr8_4:2473779-2473798 | Msa1307140:intron | 20.0% |
| !!! | TTTTAAACTTTCTCGATTTT+GGG | + | chr8_4:2473915-2473934 | None:intergenic | 20.0% |
| !!! | TTTTTAAACTTTCTCGATTT+TGG | + | chr8_4:2473916-2473935 | None:intergenic | 20.0% |
| !! | TAAACATTCAATCTCTTATT+GGG | + | chr8_4:2474026-2474045 | None:intergenic | 20.0% |
| !! | TTAAACATTCAATCTCTTAT+TGG | + | chr8_4:2474027-2474046 | None:intergenic | 20.0% |
| !! | TTGTAGTTAAAAAAAATTGG+GGG | - | chr8_4:2474389-2474408 | Msa1307140:intron | 20.0% |
| !! | ACAATATTAAAGCAAAATGT+TGG | + | chr8_4:2474416-2474435 | None:intergenic | 20.0% |
| !!! | TTTTGCTTTAATATTGTATG+TGG | - | chr8_4:2474419-2474438 | Msa1307140:intron | 20.0% |
| !!! | GCATCTAATTTTATACTAAT+TGG | - | chr8_4:2474441-2474460 | Msa1307140:intron | 20.0% |
| !!! | TTTAACTTGTTTGCATTAAA+AGG | - | chr8_4:2474464-2474483 | Msa1307140:intron | 20.0% |
| !!! | TTTGAATTTGCTGTAAAAAT+TGG | - | chr8_4:2474513-2474532 | Msa1307140:intron | 20.0% |
| !! | AAAAATTGGATAAAGTTACA+TGG | - | chr8_4:2474527-2474546 | Msa1307140:intron | 20.0% |
| !! | AATGATGAGAGAAAAAAAAA+AGG | + | chr8_4:2474639-2474658 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACAGAAAGACA+TGG | - | chr8_4:2475487-2475506 | Msa1307140:intron | 20.0% |
| !! | AAAAAAAAACAGTAGAATTG+TGG | - | chr8_4:2475575-2475594 | Msa1307140:intron | 20.0% |
| !! | AAAAAAAACAGTAGAATTGT+GGG | - | chr8_4:2475576-2475595 | Msa1307140:intron | 20.0% |
| !!! | TTCTGTTTTTTTTCTTTTTC+GGG | - | chr8_4:2475732-2475751 | Msa1307140:intron | 20.0% |
| !!! | TACTTTTTAAAATCTCTTAG+AGG | - | chr8_4:2475901-2475920 | Msa1307140:intron | 20.0% |
| !! | TATTTATTAGTAGCAATGTA+GGG | + | chr8_4:2476073-2476092 | None:intergenic | 20.0% |
| !! | TTATTTATTAGTAGCAATGT+AGG | + | chr8_4:2476074-2476093 | None:intergenic | 20.0% |
| !!! | ATTTCTCTCTAAGATTAAAA+TGG | + | chr8_4:2476323-2476342 | None:intergenic | 20.0% |
| !! | GTATTCCTATGTTTATTATA+GGG | + | chr8_4:2476548-2476567 | None:intergenic | 20.0% |
| !! | TGTATTCCTATGTTTATTAT+AGG | + | chr8_4:2476549-2476568 | None:intergenic | 20.0% |
| !!! | TTTGTACTTTTGTTATTAGT+AGG | - | chr8_4:2476630-2476649 | Msa1307140:intron | 20.0% |
| !!! | ATTTTTCACATGACTAAAAT+GGG | + | chr8_4:2476836-2476855 | None:intergenic | 20.0% |
| !!! | GTTGTTATTTATTATTCTCA+GGG | - | chr8_4:2477011-2477030 | Msa1307140:intron | 20.0% |
| !! | ATTCATTACTTAAGATTCAT+TGG | + | chr8_4:2477492-2477511 | None:intergenic | 20.0% |
| !! | TAAGTAATGAATTTGAACTT+TGG | - | chr8_4:2477500-2477519 | Msa1307140:intron | 20.0% |
| ! | AAAAAGACAGTTCATGAAAA+GGG | + | chr8_4:2469350-2469369 | None:intergenic | 25.0% |
| ! | AAAAAAGACAGTTCATGAAA+AGG | + | chr8_4:2469351-2469370 | None:intergenic | 25.0% |
| ! | ATGCATGTCTCAAATTAATT+TGG | - | chr8_4:2469430-2469449 | Msa1307140:three_prime_UTR | 25.0% |
| ! | GTAAACTCTTAGATACTTTA+GGG | - | chr8_4:2469581-2469600 | Msa1307140:three_prime_UTR | 25.0% |
| !! | CTGTATCATTCCAATTTTAT+CGG | - | chr8_4:2469684-2469703 | Msa1307140:CDS | 25.0% |
| ! | ATTAATTTATAGTCCTTTCG+AGG | + | chr8_4:2469714-2469733 | None:intergenic | 25.0% |
| ! | TTTATCTTAAAAACAGAAGG+AGG | + | chr8_4:2469826-2469845 | None:intergenic | 25.0% |
| !!! | GAGTGTTGATTTTTTTACAA+AGG | + | chr8_4:2469899-2469918 | None:intergenic | 25.0% |
| ! | TCTAAAAAAACACTCAAACT+GGG | - | chr8_4:2469930-2469949 | Msa1307140:intron | 25.0% |
| !! | CAAACATGATTTTATAGAGT+TGG | + | chr8_4:2470083-2470102 | None:intergenic | 25.0% |
| ! | CAACTCTATAAAATCATGTT+TGG | - | chr8_4:2470081-2470100 | Msa1307140:intron | 25.0% |
| ! | TCAATATCACTTGAATAGAT+TGG | + | chr8_4:2470456-2470475 | None:intergenic | 25.0% |
| ! | ATCTATTCAAGTGATATTGA+TGG | - | chr8_4:2470456-2470475 | Msa1307140:intron | 25.0% |
| ! | TTTATTTGGATTAACCTTTC+TGG | - | chr8_4:2470600-2470619 | Msa1307140:intron | 25.0% |
| ! | ACGTATGAGATTAAATACTT+AGG | - | chr8_4:2470697-2470716 | Msa1307140:intron | 25.0% |
| ! | ACACAAATTACAAAATCACA+TGG | + | chr8_4:2470757-2470776 | None:intergenic | 25.0% |
| ! | GTTATCTGTGACTATATATA+TGG | - | chr8_4:2470826-2470845 | Msa1307140:intron | 25.0% |
| ! | AATTTATGATTCATATACCG+AGG | - | chr8_4:2471131-2471150 | Msa1307140:intron | 25.0% |
| ! | GCAAATAGTCTCAATAAATA+TGG | - | chr8_4:2471326-2471345 | Msa1307140:intron | 25.0% |
| !! | ATAGAATATTTGGATTTTGG+GGG | - | chr8_4:2471555-2471574 | Msa1307140:intron | 25.0% |
| !!! | ACCCTCCTATTAATTTTTTT+TGG | - | chr8_4:2471709-2471728 | Msa1307140:intron | 25.0% |
| ! | TATTAGTGAAGCACATTATT+AGG | + | chr8_4:2471803-2471822 | None:intergenic | 25.0% |
| !! | GAAAATTATCCCAATTTTCT+TGG | + | chr8_4:2471851-2471870 | None:intergenic | 25.0% |
| ! | CTTAGGCATAATATGAAAAA+AGG | + | chr8_4:2472120-2472139 | None:intergenic | 25.0% |
| !!! | CTTTTTTCATATTATGCCTA+AGG | - | chr8_4:2472118-2472137 | Msa1307140:intron | 25.0% |
| !! | ACCTTTTAAACTTCTTATCA+AGG | - | chr8_4:2472202-2472221 | Msa1307140:intron | 25.0% |
| ! | ACCTTGATAAGAAGTTTAAA+AGG | + | chr8_4:2472206-2472225 | None:intergenic | 25.0% |
| ! | TTACTACTGGTATTATTAGT+TGG | - | chr8_4:2472239-2472258 | Msa1307140:intron | 25.0% |
| ! | TACTACTGGTATTATTAGTT+GGG | - | chr8_4:2472240-2472259 | Msa1307140:intron | 25.0% |
| ! | ATTATCTAATATAGGACGAA+GGG | + | chr8_4:2472417-2472436 | None:intergenic | 25.0% |
| ! | TATTATCTAATATAGGACGA+AGG | + | chr8_4:2472418-2472437 | None:intergenic | 25.0% |
| !!! | GATTTTAAGAACTGAAATGA+AGG | + | chr8_4:2472996-2473015 | None:intergenic | 25.0% |
| ! | AGGAATATGAATATGATTCA+TGG | - | chr8_4:2473406-2473425 | Msa1307140:intron | 25.0% |
| ! | TGAATATGATTCATGGTATT+AGG | - | chr8_4:2473413-2473432 | Msa1307140:intron | 25.0% |
| ! | GAATATGATTCATGGTATTA+GGG | - | chr8_4:2473414-2473433 | Msa1307140:intron | 25.0% |
| ! | TAGAATACACATTGAATTCA+GGG | + | chr8_4:2473591-2473610 | None:intergenic | 25.0% |
| ! | ATAGAATACACATTGAATTC+AGG | + | chr8_4:2473592-2473611 | None:intergenic | 25.0% |
| !! | TGATCTGTCAATAATTTGTA+TGG | - | chr8_4:2473648-2473667 | Msa1307140:intron | 25.0% |
| !! | ATGTAGTCATTCTAATTTGT+AGG | + | chr8_4:2473864-2473883 | None:intergenic | 25.0% |
| ! | TTAATACTCACTCTCTAATT+GGG | - | chr8_4:2473961-2473980 | Msa1307140:CDS | 25.0% |
| !! | TTAAATCAATGTGAAGTGTT+GGG | - | chr8_4:2473984-2474003 | Msa1307140:CDS | 25.0% |
| !!! | GAAATTAGATGGATTTTTGA+AGG | + | chr8_4:2474110-2474129 | None:intergenic | 25.0% |
| ! | ATGATGCAAAAAAACTGTAA+TGG | + | chr8_4:2474144-2474163 | None:intergenic | 25.0% |
| ! | TTAGACTCTATTTATATCAG+TGG | + | chr8_4:2474493-2474512 | None:intergenic | 25.0% |
| !!! | TAAAGTTACATGGTTTTAGA+AGG | - | chr8_4:2474537-2474556 | Msa1307140:intron | 25.0% |
| ! | CATATTCATACTGTGAAAAT+TGG | - | chr8_4:2474608-2474627 | Msa1307140:intron | 25.0% |
| ! | CACTAAAAGTTAAAAATCCA+TGG | + | chr8_4:2474857-2474876 | None:intergenic | 25.0% |
| ! | ATCAATGAAACTATAATGCT+AGG | - | chr8_4:2474909-2474928 | Msa1307140:intron | 25.0% |
| ! | AAATATCCAACATTCTAACT+TGG | + | chr8_4:2474991-2475010 | None:intergenic | 25.0% |
| ! | AATTTGCAAAGATTTAACCA+GGG | + | chr8_4:2475280-2475299 | None:intergenic | 25.0% |
| ! | AGAAAAAAAACAGAAAGACA+CGG | + | chr8_4:2475727-2475746 | None:intergenic | 25.0% |
| !!! | TTTTTAAAATCTCTTAGAGG+AGG | - | chr8_4:2475904-2475923 | Msa1307140:intron | 25.0% |
| ! | AGTATTTCATATTACTCAGT+GGG | - | chr8_4:2476019-2476038 | Msa1307140:intron | 25.0% |
| ! | TTCTTAAACGAAATAATCAG+TGG | + | chr8_4:2476116-2476135 | None:intergenic | 25.0% |
| ! | GTATTTATCATGTTACTGAT+GGG | + | chr8_4:2476243-2476262 | None:intergenic | 25.0% |
| ! | TACTTTAAACAAACGCATTT+CGG | + | chr8_4:2476442-2476461 | None:intergenic | 25.0% |
| ! | ATTACAATGGAATACAAGTT+AGG | + | chr8_4:2476681-2476700 | None:intergenic | 25.0% |
| ! | AACTTGTATTCCATTGTAAT+AGG | - | chr8_4:2476681-2476700 | Msa1307140:intron | 25.0% |
| ! | ACATCATATACCTATTACAA+TGG | + | chr8_4:2476694-2476713 | None:intergenic | 25.0% |
| !! | CATTTTTCACATGACTAAAA+TGG | + | chr8_4:2476837-2476856 | None:intergenic | 25.0% |
| !!! | CATTTTAGTCATGTGAAAAA+TGG | - | chr8_4:2476835-2476854 | Msa1307140:intron | 25.0% |
| !!! | CTGTCTCAAATTATTTTTCT+CGG | - | chr8_4:2476979-2476998 | Msa1307140:intron | 25.0% |
| !!! | CGTTGTTATTTATTATTCTC+AGG | - | chr8_4:2477010-2477029 | Msa1307140:intron | 25.0% |
| !!! | TGTGTTTTATTATCATGTAG+AGG | - | chr8_4:2477618-2477637 | Msa1307140:intron | 25.0% |
| !!! | GTGTTTTATTATCATGTAGA+GGG | - | chr8_4:2477619-2477638 | Msa1307140:intron | 25.0% |
| !! | TTTGTGTTCTTGATTTTCTA+TGG | - | chr8_4:2477644-2477663 | Msa1307140:intron | 25.0% |
| ! | TATCATTTACTTGTGATGGA+AGG | - | chr8_4:2469375-2469394 | Msa1307140:three_prime_UTR | 30.0% |
| ! | ATGATAACCTTTTCAACCTA+AGG | + | chr8_4:2469495-2469514 | None:intergenic | 30.0% |
| GGTAAACTCTTAGATACTTT+AGG | - | chr8_4:2469580-2469599 | Msa1307140:three_prime_UTR | 30.0% | |
| CGATAAAATTGGAATGATAC+AGG | + | chr8_4:2469686-2469705 | None:intergenic | 30.0% | |
| TACATACACAATTAAACTCG+AGG | - | chr8_4:2469773-2469792 | Msa1307140:CDS | 30.0% | |
| ACAGAAGGAGGATAAAATTA+AGG | + | chr8_4:2469814-2469833 | None:intergenic | 30.0% | |
| ATAGATAGGTATATGGATGA+TGG | - | chr8_4:2469845-2469864 | Msa1307140:CDS | 30.0% | |
| !!! | CAGTTTGAGTGTTTTTTTAG+AGG | + | chr8_4:2469931-2469950 | None:intergenic | 30.0% |
| ! | CTCTAAAAAAACACTCAAAC+TGG | - | chr8_4:2469929-2469948 | Msa1307140:intron | 30.0% |
| CCAAGAAAAAAGAGTTTAAG+AGG | + | chr8_4:2469957-2469976 | None:intergenic | 30.0% | |
| !!! | CCTCTTAAACTCTTTTTTCT+TGG | - | chr8_4:2469954-2469973 | Msa1307140:intron | 30.0% |
| TAACATCCTATCAATTAAGC+AGG | - | chr8_4:2469981-2470000 | Msa1307140:intron | 30.0% | |
| ATGTATCCTGCTTAATTGAT+AGG | + | chr8_4:2469990-2470009 | None:intergenic | 30.0% | |
| ! | TTATAGAGTTGGAATGCTTT+TGG | + | chr8_4:2470072-2470091 | None:intergenic | 30.0% |
| !!! | GATGTTTTAGGGTAATTTGT+GGG | + | chr8_4:2470402-2470421 | None:intergenic | 30.0% |
| !! | CTCTTTGTTTGGATGTTTTA+GGG | + | chr8_4:2470413-2470432 | None:intergenic | 30.0% |
| AATCACATGGTTCAATTCTT+TGG | + | chr8_4:2470744-2470763 | None:intergenic | 30.0% | |
| AATTCAGATCATATGCAGAT+AGG | - | chr8_4:2471039-2471058 | Msa1307140:intron | 30.0% | |
| ! | CTTTTAATGGGATCATGATT+TGG | + | chr8_4:2471185-2471204 | None:intergenic | 30.0% |
| AATGCAAAACATAGTTAGCA+CGG | + | chr8_4:2471449-2471468 | None:intergenic | 30.0% | |
| ! | ATTAGCAAACGTTTCTGAAA+AGG | - | chr8_4:2471581-2471600 | Msa1307140:intron | 30.0% |
| GCCCAAACTTTAAATGATAT+AGG | - | chr8_4:2471603-2471622 | Msa1307140:intron | 30.0% | |
| !!! | AATATTTTTGGCCCTTTTAG+TGG | - | chr8_4:2471643-2471662 | Msa1307140:intron | 30.0% |
| ! | GGTTGTTCTAAATAATATGC+TGG | - | chr8_4:2471730-2471749 | Msa1307140:intron | 30.0% |
| AGCACATTATTAGGAACAAA+GGG | + | chr8_4:2471794-2471813 | None:intergenic | 30.0% | |
| AAGCACATTATTAGGAACAA+AGG | + | chr8_4:2471795-2471814 | None:intergenic | 30.0% | |
| AGAATCAAGATAAACGAACA+GGG | + | chr8_4:2472165-2472184 | None:intergenic | 30.0% | |
| AAGAATCAAGATAAACGAAC+AGG | + | chr8_4:2472166-2472185 | None:intergenic | 30.0% | |
| TATTAGTTGGGTCATGTTTA+CGG | - | chr8_4:2472252-2472271 | Msa1307140:intron | 30.0% | |
| !! | ATTGAATAAGTTGGTCTATG+AGG | + | chr8_4:2472678-2472697 | None:intergenic | 30.0% |
| CGTGATAGAATTGAATAAGT+TGG | + | chr8_4:2472687-2472706 | None:intergenic | 30.0% | |
| ACTGAGAATGATTGTGATAT+AGG | - | chr8_4:2473386-2473405 | Msa1307140:intron | 30.0% | |
| CATTAGATCATGTCATGATA+TGG | + | chr8_4:2473705-2473724 | None:intergenic | 30.0% | |
| ! | TCTAATTTGTAGGAAGATCA+AGG | + | chr8_4:2473854-2473873 | None:intergenic | 30.0% |
| GTTAATACTCACTCTCTAAT+TGG | - | chr8_4:2473960-2473979 | Msa1307140:CDS | 30.0% | |
| GTTAAATCAATGTGAAGTGT+TGG | - | chr8_4:2473983-2474002 | Msa1307140:CDS | 30.0% | |
| !! | ATGGATTTTTGAAGGAAATG+AGG | + | chr8_4:2474102-2474121 | None:intergenic | 30.0% |
| TTAACATCACGGAAATTAGA+TGG | + | chr8_4:2474121-2474140 | None:intergenic | 30.0% | |
| AACTGTAATGGTTAACATCA+CGG | + | chr8_4:2474132-2474151 | None:intergenic | 30.0% | |
| ! | TGCATACATATTAAGAGTGT+CGG | + | chr8_4:2474259-2474278 | None:intergenic | 30.0% |
| !! | TTTCTCTCATCATTTTGACA+TGG | - | chr8_4:2474645-2474664 | Msa1307140:intron | 30.0% |
| ! | TATATTTTGCACAGTTGCAA+AGG | + | chr8_4:2474674-2474693 | None:intergenic | 30.0% |
| AATTGCTAAAGAGTGAAGAA+CGG | + | chr8_4:2474808-2474827 | None:intergenic | 30.0% | |
| TCATTACCAAGTTAGAATGT+TGG | - | chr8_4:2474982-2475001 | Msa1307140:intron | 30.0% | |
| ! | AGTGTTGAAAACATCTACAA+TGG | + | chr8_4:2475043-2475062 | None:intergenic | 30.0% |
| ATGATTAATCTAGTAACAGC+TGG | + | chr8_4:2475190-2475209 | None:intergenic | 30.0% | |
| GAATTTGCAAAGATTTAACC+AGG | + | chr8_4:2475281-2475300 | None:intergenic | 30.0% | |
| GAGTATTTCATATTACTCAG+TGG | - | chr8_4:2476018-2476037 | Msa1307140:intron | 30.0% | |
| GTATTTCATATTACTCAGTG+GGG | - | chr8_4:2476020-2476039 | Msa1307140:intron | 30.0% | |
| TATTTCATATTACTCAGTGG+GGG | - | chr8_4:2476021-2476040 | Msa1307140:intron | 30.0% | |
| CGTATTTATCATGTTACTGA+TGG | + | chr8_4:2476244-2476263 | None:intergenic | 30.0% | |
| AATACGATCTTTCATATGAG+TGG | - | chr8_4:2476258-2476277 | Msa1307140:intron | 30.0% | |
| GAGAAATATGAACTCATCAT+TGG | - | chr8_4:2476336-2476355 | Msa1307140:intron | 30.0% | |
| TTAGATGGCATAAACTACAT+TGG | - | chr8_4:2476413-2476432 | Msa1307140:intron | 30.0% | |
| TAGCACCCTATAATAAACAT+AGG | - | chr8_4:2476540-2476559 | Msa1307140:intron | 30.0% | |
| ACACATTCACATGAATGAAT+GGG | + | chr8_4:2476581-2476600 | None:intergenic | 30.0% | |
| AACACATTCACATGAATGAA+TGG | + | chr8_4:2476582-2476601 | None:intergenic | 30.0% | |
| ! | TATGATGTTACCCCATATTT+TGG | - | chr8_4:2476706-2476725 | Msa1307140:intron | 30.0% |
| ! | TCATGTCTTTAAAGAAGGTA+GGG | - | chr8_4:2476950-2476969 | Msa1307140:intron | 30.0% |
| TGAGTTGCTGAAAAAAACTA+CGG | + | chr8_4:2477050-2477069 | None:intergenic | 30.0% | |
| ! | TTTTCTTGCTCTCTTCTTAT+AGG | + | chr8_4:2477142-2477161 | None:intergenic | 30.0% |
| ACATTCAACTAACAATCTTC+TGG | - | chr8_4:2477193-2477212 | Msa1307140:intron | 30.0% | |
| !! | ATGATGGAAAAGTACTATGT+CGG | - | chr8_4:2477284-2477303 | Msa1307140:intron | 30.0% |
| GAGATATTATATCAGAGTCA+TGG | + | chr8_4:2477694-2477713 | None:intergenic | 30.0% | |
| ! | AGGTCTTTTATCGCAGTTTA+AGG | - | chr8_4:2469304-2469323 | Msa1307140:three_prime_UTR | 35.0% |
| ACATGACAAACACATACCTT+AGG | - | chr8_4:2469476-2469495 | Msa1307140:three_prime_UTR | 35.0% | |
| !! | ACACATACCTTAGGTTGAAA+AGG | - | chr8_4:2469485-2469504 | Msa1307140:three_prime_UTR | 35.0% |
| !! | ACTTTAGGGTTTAGTCGTAT+CGG | - | chr8_4:2469595-2469614 | Msa1307140:three_prime_UTR | 35.0% |
| TTTCAGTGAAGATAGATGCA+GGG | - | chr8_4:2470328-2470347 | Msa1307140:intron | 35.0% | |
| ! | TTTAGGGTAATTTGTGGGAT+GGG | + | chr8_4:2470397-2470416 | None:intergenic | 35.0% |
| !!! | TTTTAGGGTAATTTGTGGGA+TGG | + | chr8_4:2470398-2470417 | None:intergenic | 35.0% |
| !!! | GGATGTTTTAGGGTAATTTG+TGG | + | chr8_4:2470403-2470422 | None:intergenic | 35.0% |
| !! | CCTCTTTGTTTGGATGTTTT+AGG | + | chr8_4:2470414-2470433 | None:intergenic | 35.0% |
| CCTAAAACATCCAAACAAAG+AGG | - | chr8_4:2470411-2470430 | Msa1307140:CDS | 35.0% | |
| GCTATATGAACCTCTTTGTT+TGG | + | chr8_4:2470424-2470443 | None:intergenic | 35.0% | |
| !! | TGTGTTCATGTTGTTTCTGT+TGG | - | chr8_4:2470774-2470793 | Msa1307140:intron | 35.0% |
| AATTTGTCATACCACTAAGC+AGG | - | chr8_4:2470916-2470935 | Msa1307140:CDS | 35.0% | |
| TAATCACACAAGGACATCTT+TGG | - | chr8_4:2471062-2471081 | Msa1307140:intron | 35.0% | |
| !! | TGGTTGATGATAAGACCAAA+CGG | + | chr8_4:2471088-2471107 | None:intergenic | 35.0% |
| ! | CATGATTTGGACAACTATGT+CGG | + | chr8_4:2471172-2471191 | None:intergenic | 35.0% |
| TGTAGTCACAAAACACAGAT+TGG | - | chr8_4:2471232-2471251 | Msa1307140:intron | 35.0% | |
| TTTCTTTGACTAGTGTCTCA+TGG | - | chr8_4:2472365-2472384 | Msa1307140:intron | 35.0% | |
| !! | TACAAGATTTTGACAGAGGT+TGG | + | chr8_4:2472943-2472962 | None:intergenic | 35.0% |
| !! | TGCTTACAAGATTTTGACAG+AGG | + | chr8_4:2472947-2472966 | None:intergenic | 35.0% |
| AATCTTGCAGTTGAAGAAGA+TGG | - | chr8_4:2473112-2473131 | Msa1307140:intron | 35.0% | |
| ATCTTGCAGTTGAAGAAGAT+GGG | - | chr8_4:2473113-2473132 | Msa1307140:intron | 35.0% | |
| ATCAGAGACTTTAACCTTTG+AGG | - | chr8_4:2473142-2473161 | Msa1307140:intron | 35.0% | |
| ACAATAACAAGAACGATTGC+TGG | - | chr8_4:2473177-2473196 | Msa1307140:intron | 35.0% | |
| CTGGATCATAGTCAACAAAA+AGG | - | chr8_4:2473196-2473215 | Msa1307140:intron | 35.0% | |
| !!! | GGTATTAGGGTTTTAAACTG+CGG | - | chr8_4:2473427-2473446 | Msa1307140:intron | 35.0% |
| GACAGATCAAAATACTCTTG+TGG | + | chr8_4:2473637-2473656 | None:intergenic | 35.0% | |
| CACTCTTAATATGTATGCAG+TGG | - | chr8_4:2474260-2474279 | Msa1307140:intron | 35.0% | |
| TAATATGTATGCAGTGGTGT+TGG | - | chr8_4:2474266-2474285 | Msa1307140:intron | 35.0% | |
| !! | ATCACATTCTCAGCTTGTTA+TGG | - | chr8_4:2474701-2474720 | Msa1307140:intron | 35.0% |
| !! | TCACATTCTCAGCTTGTTAT+GGG | - | chr8_4:2474702-2474721 | Msa1307140:intron | 35.0% |
| AGATTCAACTTGGTAGAGTT+AGG | + | chr8_4:2474758-2474777 | None:intergenic | 35.0% | |
| CAATGAAGCTAGATTCAACT+TGG | + | chr8_4:2474768-2474787 | None:intergenic | 35.0% | |
| GGACAAATTGACAAATCACA+AGG | + | chr8_4:2474836-2474855 | None:intergenic | 35.0% | |
| ! | GTGATTTGTCAATTTGTCCA+TGG | - | chr8_4:2474837-2474856 | Msa1307140:intron | 35.0% |
| ! | CTATAATGCTAGGTCTTTTC+TGG | - | chr8_4:2474919-2474938 | Msa1307140:intron | 35.0% |
| !! | TTGAGTTGATAACCTTGCTT+TGG | - | chr8_4:2475130-2475149 | Msa1307140:intron | 35.0% |
| AGATTAGATTCTCCAAAGCA+AGG | + | chr8_4:2475145-2475164 | None:intergenic | 35.0% | |
| GAAGACTTTGCTACTCTAAA+CGG | + | chr8_4:2475252-2475271 | None:intergenic | 35.0% | |
| ! | GCTGATTATGAAGATTGGTT+TGG | + | chr8_4:2475352-2475371 | None:intergenic | 35.0% |
| TTTCAAAACGACTGCTATGT+AGG | - | chr8_4:2475603-2475622 | Msa1307140:intron | 35.0% | |
| !!! | AGTTTTGAGATGAGAAAGCA+AGG | + | chr8_4:2475829-2475848 | None:intergenic | 35.0% |
| GAGTAATATGAAATACTCCG+TGG | + | chr8_4:2476016-2476035 | None:intergenic | 35.0% | |
| TTCGTTTAAGAACTAGCATC+AGG | - | chr8_4:2476124-2476143 | Msa1307140:intron | 35.0% | |
| ! | GAACTCATCATTGGTTACTT+CGG | - | chr8_4:2476345-2476364 | Msa1307140:intron | 35.0% |
| TATTTAGGAATAACTTCCCC+AGG | - | chr8_4:2476472-2476491 | Msa1307140:intron | 35.0% | |
| ATTTCCATCATTGCTTTCCT+GGG | + | chr8_4:2476492-2476511 | None:intergenic | 35.0% | |
| AATTTCCATCATTGCTTTCC+TGG | + | chr8_4:2476493-2476512 | None:intergenic | 35.0% | |
| GGATGATCATCCAAAATATG+GGG | + | chr8_4:2476719-2476738 | None:intergenic | 35.0% | |
| GGGATGATCATCCAAAATAT+GGG | + | chr8_4:2476720-2476739 | None:intergenic | 35.0% | |
| !! | CATATTTTGGATGATCATCC+CGG | - | chr8_4:2476719-2476738 | Msa1307140:intron | 35.0% |
| !! | GTCTCGGTTTATTTTTCTCA+GGG | + | chr8_4:2476901-2476920 | None:intergenic | 35.0% |
| !! | TGTCTCGGTTTATTTTTCTC+AGG | + | chr8_4:2476902-2476921 | None:intergenic | 35.0% |
| ! | TTGCCTCATGTCTTTAAAGA+AGG | - | chr8_4:2476945-2476964 | Msa1307140:intron | 35.0% |
| ! | CTACCTTCTTTAAAGACATG+AGG | + | chr8_4:2476951-2476970 | None:intergenic | 35.0% |
| ! | CTCATGTCTTTAAAGAAGGT+AGG | - | chr8_4:2476949-2476968 | Msa1307140:intron | 35.0% |
| ! | CATGTCTTTAAAGAAGGTAG+GGG | - | chr8_4:2476951-2476970 | Msa1307140:intron | 35.0% |
| GAGTTGCTGAAAAAAACTAC+GGG | + | chr8_4:2477049-2477068 | None:intergenic | 35.0% | |
| ! | AATCTTCTGGTGTTTTACAC+AGG | - | chr8_4:2477206-2477225 | Msa1307140:intron | 35.0% |
| ! | ATCTTCTGGTGTTTTACACA+GGG | - | chr8_4:2477207-2477226 | Msa1307140:intron | 35.0% |
| !! | TGATGGAAAAGTACTATGTC+GGG | - | chr8_4:2477285-2477304 | Msa1307140:intron | 35.0% |
| CTTATGGTAGATGCTTGAAT+TGG | + | chr8_4:2477362-2477381 | None:intergenic | 35.0% | |
| ! | AGAAGATTGATTGCTGCTTA+TGG | + | chr8_4:2477378-2477397 | None:intergenic | 35.0% |
| ATAAGCAGCAATCAATCTTC+TGG | - | chr8_4:2477377-2477396 | Msa1307140:intron | 35.0% | |
| !!! | GGCTATAGTTTTAGACTCTT+TGG | - | chr8_4:2477521-2477540 | Msa1307140:intron | 35.0% |
| ! | ACATAAGGCAGTGTTCTTTT+TGG | - | chr8_4:2477579-2477598 | Msa1307140:intron | 35.0% |
| ! | TACTTGTGATGGAAGGTTTG+TGG | - | chr8_4:2469382-2469401 | Msa1307140:three_prime_UTR | 40.0% |
| TCGAGGACATCCGATAAAAT+TGG | + | chr8_4:2469697-2469716 | None:intergenic | 40.0% | |
| ! | TTTTATCGGATGTCCTCGAA+AGG | - | chr8_4:2469698-2469717 | Msa1307140:CDS | 40.0% |
| CTTTCAGTGAAGATAGATGC+AGG | - | chr8_4:2470327-2470346 | Msa1307140:intron | 40.0% | |
| !! | TAACCTTTCTGGTTTGTTGC+AGG | - | chr8_4:2470611-2470630 | Msa1307140:intron | 40.0% |
| TACTAGCTAGTGTTAAGCCA+TGG | - | chr8_4:2470634-2470653 | Msa1307140:intron | 40.0% | |
| ACTAGCTAGTGTTAAGCCAT+GGG | - | chr8_4:2470635-2470654 | Msa1307140:intron | 40.0% | |
| CCAAAATAATGCCTGCTTAG+TGG | + | chr8_4:2470930-2470949 | None:intergenic | 40.0% | |
| ! | CCACTAAGCAGGCATTATTT+TGG | - | chr8_4:2470927-2470946 | Msa1307140:CDS | 40.0% |
| TGCAGATAGGTAATCACACA+AGG | - | chr8_4:2471052-2471071 | Msa1307140:intron | 40.0% | |
| GGACGGTTCATATTTAACCT+CGG | + | chr8_4:2471151-2471170 | None:intergenic | 40.0% | |
| ATTTGGACAACTATGTCGGA+CGG | + | chr8_4:2471168-2471187 | None:intergenic | 40.0% | |
| ! | GTTGACTCTTCTTCGTTTAC+AGG | - | chr8_4:2471470-2471489 | Msa1307140:intron | 40.0% |
| ! | GGGGGTGTGTATAGAATATT+TGG | - | chr8_4:2471545-2471564 | Msa1307140:intron | 40.0% |
| ! | CATAGAATTTTACGGGCCTT+AGG | + | chr8_4:2472137-2472156 | None:intergenic | 40.0% |
| GGCCCGTAAAATTCTATGAA+CGG | - | chr8_4:2472139-2472158 | Msa1307140:intron | 40.0% | |
| ! | GGCCGTTCATAGAATTTTAC+GGG | + | chr8_4:2472144-2472163 | None:intergenic | 40.0% |
| ! | GGGCCGTTCATAGAATTTTA+CGG | + | chr8_4:2472145-2472164 | None:intergenic | 40.0% |
| !! | AAGTTCTGAGGCATTGGTTA+AGG | - | chr8_4:2472281-2472300 | Msa1307140:intron | 40.0% |
| ! | GACTTTAACCTTTGAGGATG+TGG | - | chr8_4:2473148-2473167 | Msa1307140:intron | 40.0% |
| ! | CAAAATACTCTTGTGGACTG+TGG | + | chr8_4:2473630-2473649 | None:intergenic | 40.0% |
| !! | AGTATTAACGAGAGTGTTGC+TGG | + | chr8_4:2473949-2473968 | None:intergenic | 40.0% |
| !! | TGAAGTGTTGGGACATACAT+TGG | - | chr8_4:2473995-2474014 | Msa1307140:CDS | 40.0% |
| ACAGGGGGTTAATAGACATT+TGG | + | chr8_4:2474178-2474197 | None:intergenic | 40.0% | |
| TATTAACCCCCTGTTATGAG+AGG | - | chr8_4:2474184-2474203 | Msa1307140:intron | 40.0% | |
| TTCCTTACCTCTCATAACAG+GGG | + | chr8_4:2474194-2474213 | None:intergenic | 40.0% | |
| GTTCCTTACCTCTCATAACA+GGG | + | chr8_4:2474195-2474214 | None:intergenic | 40.0% | |
| AGTTCCTTACCTCTCATAAC+AGG | + | chr8_4:2474196-2474215 | None:intergenic | 40.0% | |
| AGGTAAGGAACTATGATGCA+CGG | - | chr8_4:2474204-2474223 | Msa1307140:intron | 40.0% | |
| !!! | GTGAGGATAATGGGAGTTTT+AGG | - | chr8_4:2474356-2474375 | Msa1307140:intron | 40.0% |
| !!! | TAATGGGAGTTTTAGGCACA+AGG | - | chr8_4:2474363-2474382 | Msa1307140:intron | 40.0% |
| GACTTTAGACGCTAGAATAC+TGG | + | chr8_4:2475220-2475239 | None:intergenic | 40.0% | |
| AGCCATGTTCACTGAAGTAA+CGG | - | chr8_4:2475324-2475343 | Msa1307140:intron | 40.0% | |
| TTCCGTTACTTCAGTGAACA+TGG | + | chr8_4:2475329-2475348 | None:intergenic | 40.0% | |
| GTGCAGCTGATTATGAAGAT+TGG | + | chr8_4:2475357-2475376 | None:intergenic | 40.0% | |
| GACTCTGCAAAGACACAATT+TGG | - | chr8_4:2475514-2475533 | Msa1307140:intron | 40.0% | |
| AAAGACACAATTTGGCGACA+CGG | - | chr8_4:2475522-2475541 | Msa1307140:intron | 40.0% | |
| AACGACTGCTATGTAGGATT+TGG | - | chr8_4:2475609-2475628 | Msa1307140:intron | 40.0% | |
| TGCAATTTACTCTGAGCACT+TGG | - | chr8_4:2475931-2475950 | Msa1307140:intron | 40.0% | |
| GCAATTTACTCTGAGCACTT+GGG | - | chr8_4:2475932-2475951 | Msa1307140:intron | 40.0% | |
| ! | AGACAGCAAACTTTAAGGGA+GGG | + | chr8_4:2475964-2475983 | None:intergenic | 40.0% |
| ! | TAGACAGCAAACTTTAAGGG+AGG | + | chr8_4:2475965-2475984 | None:intergenic | 40.0% |
| !! | TCCCTTAAAGTTTGCTGTCT+AGG | - | chr8_4:2475964-2475983 | Msa1307140:intron | 40.0% |
| CCCTAGACAGCAAACTTTAA+GGG | + | chr8_4:2475968-2475987 | None:intergenic | 40.0% | |
| !! | CCCTTAAAGTTTGCTGTCTA+GGG | - | chr8_4:2475965-2475984 | Msa1307140:intron | 40.0% |
| !! | CCTTAAAGTTTGCTGTCTAG+GGG | - | chr8_4:2475966-2475985 | Msa1307140:intron | 40.0% |
| !! | CTTAAAGTTTGCTGTCTAGG+GGG | - | chr8_4:2475967-2475986 | Msa1307140:intron | 40.0% |
| CAAGCCACTGAAATATTCCA+CGG | - | chr8_4:2475996-2476015 | Msa1307140:intron | 40.0% | |
| TACTCCGTGGAATATTTCAG+TGG | + | chr8_4:2476003-2476022 | None:intergenic | 40.0% | |
| TAGTAGCAATGTAGGGACTT+GGG | + | chr8_4:2476066-2476085 | None:intergenic | 40.0% | |
| TTAGTAGCAATGTAGGGACT+TGG | + | chr8_4:2476067-2476086 | None:intergenic | 40.0% | |
| !! | TTGGCTGGTTTATAGACCAA+CGG | - | chr8_4:2476202-2476221 | Msa1307140:intron | 40.0% |
| TTGGTTACTTCGGCAAACTT+CGG | - | chr8_4:2476355-2476374 | Msa1307140:intron | 40.0% | |
| TTTCCATCATTGCTTTCCTG+GGG | + | chr8_4:2476491-2476510 | None:intergenic | 40.0% | |
| CGGGATGATCATCCAAAATA+TGG | + | chr8_4:2476721-2476740 | None:intergenic | 40.0% | |
| AGACATGAGGCAAAGTTGTT+CGG | + | chr8_4:2476938-2476957 | None:intergenic | 40.0% | |
| CTTCTTATAGGCTATGACAG+AGG | + | chr8_4:2477130-2477149 | None:intergenic | 40.0% | |
| !!! | ACCACCGATTTTGAAGATGT+TGG | - | chr8_4:2477239-2477258 | Msa1307140:intron | 40.0% |
| GTGGCCAACATCTTCAAAAT+CGG | + | chr8_4:2477246-2477265 | None:intergenic | 40.0% | |
| !! | GATGGAAAAGTACTATGTCG+GGG | - | chr8_4:2477286-2477305 | Msa1307140:intron | 40.0% |
| GCATTTGCTCTTCAGTACTA+TGG | - | chr8_4:2477452-2477471 | Msa1307140:intron | 40.0% | |
| CGCAATCTAGCATGAATAAG+AGG | + | chr8_4:2477670-2477689 | None:intergenic | 40.0% | |
| GTACCTGCAACAAACCAGAA+AGG | + | chr8_4:2470617-2470636 | None:intergenic | 45.0% | |
| AGATAACAGTGACACTCCCA+TGG | + | chr8_4:2470654-2470673 | None:intergenic | 45.0% | |
| !! | ATGGGAGTGTCACTGTTATC+TGG | - | chr8_4:2470653-2470672 | Msa1307140:intron | 45.0% |
| ACTCTTCTTCGTTTACAGGC+CGG | - | chr8_4:2471474-2471493 | Msa1307140:intron | 45.0% | |
| ATTCTATACACACCCCCTAC+CGG | + | chr8_4:2471542-2471561 | None:intergenic | 45.0% | |
| AACCAATGCCTCAGAACTTG+AGG | + | chr8_4:2472280-2472299 | None:intergenic | 45.0% | |
| TGACTAGTGTCTCATGGACA+TGG | - | chr8_4:2472371-2472390 | Msa1307140:intron | 45.0% | |
| TGACGTCGCAGTAATGATTG+TGG | - | chr8_4:2473679-2473698 | Msa1307140:intron | 45.0% | |
| TCCTTACCTCTCATAACAGG+GGG | + | chr8_4:2474193-2474212 | None:intergenic | 45.0% | |
| TGTCTCCTTGTCTGTTGTGT+CGG | - | chr8_4:2474317-2474336 | Msa1307140:intron | 45.0% | |
| TTATCCTCACCTGTCAAGCA+CGG | + | chr8_4:2474346-2474365 | None:intergenic | 45.0% | |
| TGCTTGACAGGTGAGGATAA+TGG | - | chr8_4:2474346-2474365 | Msa1307140:intron | 45.0% | |
| GCTTGACAGGTGAGGATAAT+GGG | - | chr8_4:2474347-2474366 | Msa1307140:intron | 45.0% | |
| !! | TCTCAGCTTGTTATGGGAGA+TGG | - | chr8_4:2474708-2474727 | Msa1307140:intron | 45.0% |
| !! | ATGCTAGGTCTTTTCTGGTG+TGG | - | chr8_4:2474924-2474943 | Msa1307140:intron | 45.0% |
| ACTCTTATGGGTAGTGTCTG+CGG | - | chr8_4:2475085-2475104 | Msa1307140:intron | 45.0% | |
| AGCAAAGTCTTCGATATCCC+TGG | - | chr8_4:2475260-2475279 | Msa1307140:intron | 45.0% | |
| ATTTACTCTGAGCACTTGGG+AGG | - | chr8_4:2475935-2475954 | Msa1307140:intron | 45.0% | |
| TTTACTCTGAGCACTTGGGA+GGG | - | chr8_4:2475936-2475955 | Msa1307140:intron | 45.0% | |
| CCCCTAGACAGCAAACTTTA+AGG | + | chr8_4:2475969-2475988 | None:intergenic | 45.0% | |
| CGTGGAATATTTCAGTGGCT+TGG | + | chr8_4:2475998-2476017 | None:intergenic | 45.0% | |
| TATTACTCAGTGGGGGACTT+CGG | - | chr8_4:2476028-2476047 | Msa1307140:intron | 45.0% | |
| TCAGTGGTAGAACTGCTTAG+TGG | + | chr8_4:2476100-2476119 | None:intergenic | 45.0% | |
| CAACTGTGCACCTTCCAAAT+GGG | - | chr8_4:2476175-2476194 | Msa1307140:intron | 45.0% | |
| TTCGGACAGGTCATGATATC+TGG | - | chr8_4:2476373-2476392 | Msa1307140:intron | 45.0% | |
| GGGTGCTAGAAAATTCACTC+AGG | + | chr8_4:2476528-2476547 | None:intergenic | 45.0% | |
| ! | ATTTTGGATGATCATCCCGG+AGG | - | chr8_4:2476722-2476741 | Msa1307140:intron | 45.0% |
| GAGGCTTTACTTTCTGCTAC+AGG | - | chr8_4:2476749-2476768 | Msa1307140:intron | 45.0% | |
| GGGTAGGAACAAAGTTGTCT+CGG | + | chr8_4:2476917-2476936 | None:intergenic | 45.0% | |
| GACATGAGGCAAAGTTGTTC+GGG | + | chr8_4:2476937-2476956 | None:intergenic | 45.0% | |
| ! | TCTGGTGTTTTACACAGGGA+AGG | - | chr8_4:2477211-2477230 | Msa1307140:intron | 45.0% |
| GCCAACATCTTCAAAATCGG+TGG | + | chr8_4:2477243-2477262 | None:intergenic | 45.0% | |
| !! | GATGCTTGAATTGGTGCTGT+TGG | + | chr8_4:2477353-2477372 | None:intergenic | 45.0% |
| GTTGAAGTTCTTGCAGTACC+TGG | - | chr8_4:2477406-2477425 | Msa1307140:intron | 45.0% | |
| GCAGATCCCAATATCAGCAA+CGG | + | chr8_4:2477434-2477453 | None:intergenic | 45.0% | |
| !!! | ATTTTAAATCATTTTTAATA+TGG | - | chr8_4:2471373-2471392 | Msa1307140:intron | 5.0% |
| !!! | ATATATTTAATTTTTTTTGA+AGG | + | chr8_4:2472616-2472635 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAACTAAAT+TGG | + | chr8_4:2473764-2473783 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTCAATTTTTTT+TGG | - | chr8_4:2473774-2473793 | Msa1307140:intron | 5.0% |
| CAAGGACATCTTTGGCCGTT+TGG | - | chr8_4:2471070-2471089 | Msa1307140:intron | 50.0% | |
| TTACGGTGCCTCAAGTTCTG+AGG | - | chr8_4:2472269-2472288 | Msa1307140:intron | 50.0% | |
| !! | TGCCTCAAGTTCTGAGGCAT+TGG | - | chr8_4:2472275-2472294 | Msa1307140:intron | 50.0% |
| CAACGAGCGCGTTATAAACG+AGG | - | chr8_4:2472819-2472838 | Msa1307140:intron | 50.0% | |
| GTGCTTAGCCACATCCTCAA+AGG | + | chr8_4:2473159-2473178 | None:intergenic | 50.0% | |
| TGCGGTCTCAGTAACGATTG+TGG | - | chr8_4:2473445-2473464 | Msa1307140:intron | 50.0% | |
| TCACATCACGAGCGATCTGA+TGG | - | chr8_4:2473468-2473487 | Msa1307140:intron | 50.0% | |
| ACCCCCTGTTATGAGAGGTA+AGG | - | chr8_4:2474189-2474208 | Msa1307140:intron | 50.0% | |
| ACGCGACACGCTTAATGCTA+AGG | + | chr8_4:2474233-2474252 | None:intergenic | 50.0% | |
| GGAATCCGACACAACAGACA+AGG | + | chr8_4:2474325-2474344 | None:intergenic | 50.0% | |
| AGAGTGAAGAACGGTGTGAC+TGG | + | chr8_4:2474799-2474818 | None:intergenic | 50.0% | |
| GCTGCTTACAGGACAAGCTA+TGG | + | chr8_4:2475307-2475326 | None:intergenic | 50.0% | |
| CAGTGAACATGGCTGCTTAC+AGG | + | chr8_4:2475318-2475337 | None:intergenic | 50.0% | |
| TGAAGCACAGACACTGCTGT+TGG | - | chr8_4:2475384-2475403 | Msa1307140:intron | 50.0% | |
| GCATCTGACACATGTCGTAC+CGG | + | chr8_4:2475444-2475463 | None:intergenic | 50.0% | |
| GTACGACATGTGTCAGATGC+AGG | - | chr8_4:2475444-2475463 | Msa1307140:intron | 50.0% | |
| GACACGTGTCTTTGCAGTGA+AGG | + | chr8_4:2475676-2475695 | None:intergenic | 50.0% | |
| GACACTGCAAAGACACGGTT+TGG | + | chr8_4:2475700-2475719 | None:intergenic | 50.0% | |
| GAAAGCAAGGACACTGCTGT+TGG | + | chr8_4:2475816-2475835 | None:intergenic | 50.0% | |
| ! | CCATTTGGAAGGTGCACAGT+TGG | + | chr8_4:2476177-2476196 | None:intergenic | 50.0% |
| CCAACTGTGCACCTTCCAAA+TGG | - | chr8_4:2476174-2476193 | Msa1307140:intron | 50.0% | |
| CACCTTCCAAATGGGTGGAT+TGG | - | chr8_4:2476183-2476202 | Msa1307140:intron | 50.0% | |
| AGCCAATCCACCCATTTGGA+AGG | + | chr8_4:2476188-2476207 | None:intergenic | 50.0% | |
| !! | TTCCAAATGGGTGGATTGGC+TGG | - | chr8_4:2476187-2476206 | Msa1307140:intron | 50.0% |
| AACCAGCCAATCCACCCATT+TGG | + | chr8_4:2476192-2476211 | None:intergenic | 50.0% | |
| TGTTACTGATGGGACCGAAG+AGG | + | chr8_4:2476233-2476252 | None:intergenic | 50.0% | |
| TACTTCGGCAAACTTCGGAC+AGG | - | chr8_4:2476360-2476379 | Msa1307140:intron | 50.0% | |
| CTTCCCCAGGAAAGCAATGA+TGG | - | chr8_4:2476485-2476504 | Msa1307140:intron | 50.0% | |
| AAGTAAAGCCTCGTCACCTC+CGG | + | chr8_4:2476741-2476760 | None:intergenic | 50.0% | |
| TGAGGCAAAGTTGTTCGGGT+AGG | + | chr8_4:2476933-2476952 | None:intergenic | 50.0% | |
| AGATGTTGGCCACAGTGACT+CGG | - | chr8_4:2477253-2477272 | Msa1307140:intron | 50.0% | |
| ! | TGACTCGGCAACAGAGATGA+TGG | - | chr8_4:2477268-2477287 | Msa1307140:intron | 50.0% |
| !! | GGAAAAGTACTATGTCGGGG+AGG | - | chr8_4:2477289-2477308 | Msa1307140:intron | 50.0% |
| GGATTGTTCTTAGCTGCTGC+TGG | + | chr8_4:2477332-2477351 | None:intergenic | 50.0% | |
| !! | CTGGTGCCGTTGCTGATATT+GGG | - | chr8_4:2477425-2477444 | Msa1307140:intron | 50.0% |
| GCGATCTGATGGAGCTGATG+TGG | - | chr8_4:2473479-2473498 | Msa1307140:intron | 55.0% | |
| CCTCGATTGTTGTCACGCTG+CGG | - | chr8_4:2473502-2473521 | Msa1307140:intron | 55.0% | |
| TGTCGGATTCCGTGCTTGAC+AGG | - | chr8_4:2474334-2474353 | Msa1307140:intron | 55.0% | |
| GATTCCGTGCTTGACAGGTG+AGG | - | chr8_4:2474339-2474358 | Msa1307140:intron | 55.0% | |
| CAGCAGTGTCTGTGCTTCAG+AGG | + | chr8_4:2475383-2475402 | None:intergenic | 55.0% | |
| AGCACAGACACTGCTGTTGG+TGG | - | chr8_4:2475387-2475406 | Msa1307140:intron | 55.0% | |
| GCACAGACACTGCTGTTGGT+GGG | - | chr8_4:2475388-2475407 | Msa1307140:intron | 55.0% | |
| CGACATGTGTCAGATGCAGG+TGG | - | chr8_4:2475447-2475466 | Msa1307140:intron | 55.0% | |
| CATGTGTCAGATGCAGGTGG+CGG | - | chr8_4:2475450-2475469 | Msa1307140:intron | 55.0% | |
| GCAGCGACACTGCAAAGACA+CGG | + | chr8_4:2475705-2475724 | None:intergenic | 55.0% | |
| ! | GTCGTACTGGTGTCTGACAC+CGG | - | chr8_4:2475780-2475799 | Msa1307140:intron | 55.0% |
| ! | TCGTACTGGTGTCTGACACC+GGG | - | chr8_4:2475781-2475800 | Msa1307140:intron | 55.0% |
| ! | TGCTGTTGGTGGACATGTCC+CGG | + | chr8_4:2475802-2475821 | None:intergenic | 55.0% |
| AGCAAGGACACTGCTGTTGG+TGG | + | chr8_4:2475813-2475832 | None:intergenic | 55.0% | |
| TTGGCGACATGGGAATCAGC+AGG | + | chr8_4:2476158-2476177 | None:intergenic | 55.0% | |
| AGGTGCACAGTTGGCGACAT+GGG | + | chr8_4:2476168-2476187 | None:intergenic | 55.0% | |
| AAGGTGCACAGTTGGCGACA+TGG | + | chr8_4:2476169-2476188 | None:intergenic | 55.0% | |
| CTGTGCACCTTCCAAATGGG+TGG | - | chr8_4:2476178-2476197 | Msa1307140:intron | 55.0% | |
| GACCAACGGATCTGCCTCTT+CGG | - | chr8_4:2476216-2476235 | Msa1307140:intron | 55.0% | |
| AGTAAAGCCTCGTCACCTCC+GGG | + | chr8_4:2476740-2476759 | None:intergenic | 55.0% | |
| TCTCTGTTGCCGAGTCACTG+TGG | + | chr8_4:2477265-2477284 | None:intergenic | 55.0% | |
| ! | AGCTGCTGCTGGAAGAGTGT+TGG | + | chr8_4:2477321-2477340 | None:intergenic | 55.0% |
| CCAATATCAGCAACGGCACC+AGG | + | chr8_4:2477427-2477446 | None:intergenic | 55.0% | |
| !! | CCTGGTGCCGTTGCTGATAT+TGG | - | chr8_4:2477424-2477443 | Msa1307140:intron | 55.0% |
| TTCGTTTACAGGCCGGCCCT+AGG | - | chr8_4:2471481-2471500 | Msa1307140:intron | 60.0% | |
| TCGTTTACAGGCCGGCCCTA+GGG | - | chr8_4:2471482-2471501 | Msa1307140:intron | 60.0% | |
| TACACACCCCCTACCGGCAA+GGG | + | chr8_4:2471536-2471555 | None:intergenic | 60.0% | |
| ATACACACCCCCTACCGGCA+AGG | + | chr8_4:2471537-2471556 | None:intergenic | 60.0% | |
| CCGCAGCGTGACAACAATCG+AGG | + | chr8_4:2473505-2473524 | None:intergenic | 60.0% | |
| !! | TGCTGTTGGTGGGCTTGTCC+CGG | - | chr8_4:2475398-2475417 | Msa1307140:intron | 60.0% |
| GTACGACACGTGCCAGATGC+AGG | + | chr8_4:2475767-2475786 | None:intergenic | 60.0% | |
| GCATCTGGCACGTGTCGTAC+TGG | - | chr8_4:2475767-2475786 | Msa1307140:intron | 60.0% | |
| TGGGGGACTTCGGCACATCA+TGG | - | chr8_4:2476038-2476057 | Msa1307140:intron | 60.0% | |
| GACCGAAGAGGCAGATCCGT+TGG | + | chr8_4:2476221-2476240 | None:intergenic | 60.0% | |
| TGATCATCCCGGAGGTGACG+AGG | - | chr8_4:2476730-2476749 | Msa1307140:intron | 60.0% | |
| CACTCGCGGCCTATGCCCTA+GGG | + | chr8_4:2471500-2471519 | None:intergenic | 65.0% | |
| !! | TGGTGGGCTTGTCCCGGTGT+CGG | - | chr8_4:2475404-2475423 | Msa1307140:intron | 65.0% |
| TCTGACGCGTGTCCGACACC+GGG | + | chr8_4:2475419-2475438 | None:intergenic | 65.0% | |
| GTCTGACGCGTGTCCGACAC+CGG | + | chr8_4:2475420-2475439 | None:intergenic | 65.0% | |
| GTCGGACACGCGTCAGACAC+CGG | - | chr8_4:2475422-2475441 | Msa1307140:intron | 65.0% | |
| CACGTGCCAGATGCAGGTGG+CGG | + | chr8_4:2475761-2475780 | None:intergenic | 65.0% | |
| CGACACGTGCCAGATGCAGG+TGG | + | chr8_4:2475764-2475783 | None:intergenic | 65.0% | |
| ACAGGCCGGCCCTAGGGCAT+AGG | - | chr8_4:2471488-2471507 | Msa1307140:intron | 70.0% | |
| GCACTCGCGGCCTATGCCCT+AGG | + | chr8_4:2471501-2471520 | None:intergenic | 70.0% | |
| GGCATAGGCCGCGAGTGCGA+CGG | - | chr8_4:2471503-2471522 | Msa1307140:intron | 70.0% | |
| GCCTAGGGCCCTTGCCGGTA+GGG | - | chr8_4:2471525-2471544 | Msa1307140:intron | 70.0% | |
| CCTAGGGCCCTTGCCGGTAG+GGG | - | chr8_4:2471526-2471545 | Msa1307140:intron | 70.0% | |
| CTAGGGCCCTTGCCGGTAGG+GGG | - | chr8_4:2471527-2471546 | Msa1307140:intron | 70.0% | |
| GGGACACCGCCACCTGCATC+TGG | - | chr8_4:2475752-2475771 | Msa1307140:intron | 70.0% | |
| CGCGGCCTATGCCCTAGGGC+CGG | + | chr8_4:2471496-2471515 | None:intergenic | 75.0% | |
| GCCGCGAGTGCGACGGCCTA+GGG | - | chr8_4:2471510-2471529 | Msa1307140:intron | 75.0% | |
| GCCCTAGGCCGTCGCACTCG+CGG | + | chr8_4:2471514-2471533 | None:intergenic | 75.0% | |
| CGACGGCCTAGGGCCCTTGC+CGG | - | chr8_4:2471520-2471539 | Msa1307140:intron | 75.0% | |
| GGCCTAGGGCCCTTGCCGGT+AGG | - | chr8_4:2471524-2471543 | Msa1307140:intron | 75.0% | |
| CCCCTACCGGCAAGGGCCCT+AGG | + | chr8_4:2471529-2471548 | None:intergenic | 75.0% | |
| ! | GGCCGCGAGTGCGACGGCCT+AGG | - | chr8_4:2471509-2471528 | Msa1307140:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 2469296 | 2477864 | 2469296 | ID=Msa1307140;Name=Msa1307140 |
| chr8_4 | mRNA | 2469296 | 2477864 | 2469296 | ID=Msa1307140-mRNA-1;Parent=Msa1307140;Name=Msa1307140-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.25|0.6|0.6|1|1|5|362|191 |
| chr8_4 | exon | 2469296 | 2469932 | 2469296 | ID=Msa1307140-mRNA-1:exon:788;Parent=Msa1307140-mRNA-1 |
| chr8_4 | exon | 2470390 | 2470457 | 2470390 | ID=Msa1307140-mRNA-1:exon:787;Parent=Msa1307140-mRNA-1 |
| chr8_4 | exon | 2470914 | 2471020 | 2470914 | ID=Msa1307140-mRNA-1:exon:786;Parent=Msa1307140-mRNA-1 |
| chr8_4 | exon | 2473943 | 2474038 | 2473943 | ID=Msa1307140-mRNA-1:exon:785;Parent=Msa1307140-mRNA-1 |
| chr8_4 | exon | 2477835 | 2477864 | 2477835 | ID=Msa1307140-mRNA-1:exon:784;Parent=Msa1307140-mRNA-1 |
| chr8_4 | CDS | 2477835 | 2477864 | 2477835 | ID=Msa1307140-mRNA-1:cds;Parent=Msa1307140-mRNA-1 |
| chr8_4 | CDS | 2473943 | 2474038 | 2473943 | ID=Msa1307140-mRNA-1:cds;Parent=Msa1307140-mRNA-1 |
| chr8_4 | CDS | 2470914 | 2471020 | 2470914 | ID=Msa1307140-mRNA-1:cds;Parent=Msa1307140-mRNA-1 |
| chr8_4 | CDS | 2470390 | 2470457 | 2470390 | ID=Msa1307140-mRNA-1:cds;Parent=Msa1307140-mRNA-1 |
| chr8_4 | CDS | 2469658 | 2469932 | 2469658 | ID=Msa1307140-mRNA-1:cds;Parent=Msa1307140-mRNA-1 |
| chr8_4 | three_prime_UTR | 2469296 | 2469657 | 2469296 | ID=Msa1307140-mRNA-1:three_prime_utr;Parent=Msa1307140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
