AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1338370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1338370 MtrunA17_Chr2g0327401 97.053 509 14 1 1 509 1 508 0.0 1041
Msa1338370 MtrunA17_Chr2g0327401 80.277 289 55 1 509 797 213 499 8.31e-164 484
Msa1338370 MtrunA17_Chr2g0327381 73.042 549 88 6 1 500 1 538 0.0 805
Msa1338370 MtrunA17_Chr2g0327381 80.758 343 24 1 509 809 208 550 0.0 565
Msa1338370 MtrunA17_Chr2g0327371 70.201 547 85 6 1 501 1 515 0.0 759
Msa1338370 MtrunA17_Chr2g0327371 72.973 333 46 2 507 797 184 514 6.66e-164 485
Msa1338370 MtrunA17_Chr4g0028271 68.153 471 141 5 38 503 32 498 0.0 671
Msa1338370 MtrunA17_Chr4g0028271 62.976 289 105 1 510 798 210 496 1.85e-127 390
Msa1338370 MtrunA17_Chr1g0199171 66.322 484 152 4 39 513 20 501 0.0 668
Msa1338370 MtrunA17_Chr1g0199171 64.120 301 105 2 509 808 201 499 3.12e-132 403
Msa1338370 MtrunA17_Chr4g0028261 68.547 461 135 6 46 500 61 517 0.0 657
Msa1338370 MtrunA17_Chr4g0028261 64.706 289 99 2 510 797 231 517 4.04e-129 395
Msa1338370 MtrunA17_Chr4g0028281 66.231 459 148 4 46 500 38 493 0.0 641
Msa1338370 MtrunA17_Chr4g0028281 60.208 289 113 1 510 798 208 494 7.99e-119 368
Msa1338370 MtrunA17_Chr1g0171411 63.527 499 163 7 14 507 5 489 0.0 638
Msa1338370 MtrunA17_Chr1g0171411 65.172 290 98 2 509 797 195 482 2.16e-127 390
Msa1338370 MtrunA17_Chr4g0028241 60.480 458 167 8 51 500 40 491 0.0 551
Msa1338370 MtrunA17_Chr4g0028241 57.483 294 117 5 509 797 201 491 4.96e-103 327
Msa1338370 MtrunA17_Chr5g0447441 32.847 411 256 8 97 499 37 435 1.15e-63 220
Msa1338370 MtrunA17_Chr5g0447441 31.353 303 190 6 510 806 157 447 2.00e-35 140
Msa1338370 MtrunA17_Chr4g0044051 32.360 411 258 7 97 499 41 439 2.10e-61 214
Msa1338370 MtrunA17_Chr4g0044051 30.479 292 185 6 510 796 161 439 1.15e-31 129
Msa1338370 MtrunA17_Chr3g0094811 30.275 436 247 17 101 503 44 455 1.66e-49 181
Msa1338370 MtrunA17_Chr3g0094811 26.498 317 191 12 507 796 150 451 3.17e-20 94.7
Msa1338370 MtrunA17_Chr1g0153881 30.404 421 249 12 98 500 101 495 7.50e-49 180
Msa1338370 MtrunA17_Chr1g0153881 27.333 300 182 9 510 797 220 495 9.70e-22 99.8
Msa1338370 MtrunA17_Chr3g0118851 28.571 448 261 13 79 500 74 488 8.51e-49 180
Msa1338370 MtrunA17_Chr3g0118851 27.483 302 198 7 510 804 208 495 6.00e-24 106
Msa1338370 MtrunA17_Chr8g0338461 28.051 467 254 13 101 501 45 495 1.93e-47 176
Msa1338370 MtrunA17_Chr8g0338461 22.304 408 239 11 460 795 91 492 5.53e-17 84.7
Msa1338370 MtrunA17_Chr7g0234051 27.349 479 263 14 86 498 33 492 5.02e-47 175
Msa1338370 MtrunA17_Chr7g0234051 28.889 135 83 2 510 644 163 284 1.50e-11 67.8
Msa1338370 MtrunA17_Chr3g0118841 28.635 447 261 14 79 500 75 488 5.53e-47 175
Msa1338370 MtrunA17_Chr3g0118841 26.557 305 196 7 510 804 209 495 4.05e-22 100
Msa1338370 MtrunA17_Chr3g0118881 29.515 454 263 14 79 503 74 499 1.88e-45 171
Msa1338370 MtrunA17_Chr3g0118881 28.188 298 195 7 510 797 208 496 1.80e-17 86.3
Msa1338370 MtrunA17_Chr7g0221551 29.466 431 248 18 103 499 46 454 2.64e-45 169
Msa1338370 MtrunA17_Chr7g0221551 26.045 311 192 13 510 796 158 454 1.30e-16 83.6
Msa1338370 MtrunA17_Chr2g0309541 29.157 439 248 15 101 503 53 464 4.32e-45 169
Msa1338370 MtrunA17_Chr2g0309541 24.918 305 193 8 510 795 172 459 2.67e-22 101
Msa1338370 MtrunA17_Chr2g0318911 28.899 436 251 13 101 503 55 464 5.55e-45 169
Msa1338370 MtrunA17_Chr2g0318911 24.834 302 197 8 510 795 172 459 5.03e-21 97.4
Msa1338370 MtrunA17_Chr3g0131731 27.790 457 279 16 72 499 24 458 5.61e-45 168
Msa1338370 MtrunA17_Chr3g0090331 28.947 418 264 15 98 498 85 486 5.71e-45 169
Msa1338370 MtrunA17_Chr3g0090331 27.097 310 196 11 502 795 191 486 2.13e-19 92.4
Msa1338370 MtrunA17_Chr2g0285351 27.391 460 279 12 77 501 30 469 6.61e-45 168
Msa1338370 MtrunA17_Chr2g0304931 29.091 440 249 18 96 499 47 459 3.02e-44 166
Msa1338370 MtrunA17_Chr2g0304931 23.323 313 195 11 509 796 167 459 2.40e-15 79.7
Msa1338370 MtrunA17_Chr2g0309521 28.972 428 261 13 101 503 54 463 3.04e-44 166
Msa1338370 MtrunA17_Chr2g0309521 25.902 305 190 8 510 795 171 458 1.64e-23 104
Msa1338370 MtrunA17_Chr1g0153941 28.018 439 257 12 101 500 92 510 1.73e-43 165
Msa1338370 MtrunA17_Chr8g0385871 27.610 431 262 17 101 499 47 459 3.14e-43 163
Msa1338370 MtrunA17_Chr8g0385871 24.522 314 195 12 510 796 161 459 4.24e-17 85.1
Msa1338370 MtrunA17_Chr4g0020241 28.009 432 258 14 93 498 79 483 3.31e-43 164
Msa1338370 MtrunA17_Chr4g0020241 26.441 295 194 11 510 795 203 483 1.61e-15 80.1
Msa1338370 MtrunA17_Chr2g0309511 28.878 419 273 12 101 503 54 463 3.82e-43 163
Msa1338370 MtrunA17_Chr2g0309511 25.000 296 204 7 510 795 171 458 1.15e-20 96.3
Msa1338370 MtrunA17_Chr4g0068841 26.697 442 273 14 99 503 51 478 6.13e-43 163
Msa1338370 MtrunA17_Chr4g0068841 22.118 321 199 9 510 795 169 473 4.52e-19 91.3
Msa1338370 MtrunA17_Chr3g0118831 29.803 406 241 12 101 501 92 458 2.03e-42 161
Msa1338370 MtrunA17_Chr3g0118831 26.230 305 167 10 510 804 208 464 1.69e-16 83.2
Msa1338370 MtrunA17_Chr5g0431301 28.222 450 290 14 78 501 18 460 2.71e-42 160
Msa1338370 MtrunA17_Chr5g0431301 22.549 306 213 10 510 796 158 458 6.39e-15 78.2
Msa1338370 MtrunA17_Chr2g0285371 26.207 435 270 12 103 501 50 469 4.13e-42 160
Msa1338370 MtrunA17_Chr4g0047861 26.411 443 271 12 93 499 59 482 5.14e-42 160
Msa1338370 MtrunA17_Chr4g0047861 22.951 305 210 7 510 796 185 482 7.95e-14 74.7
Msa1338370 MtrunA17_Chr7g0249431 36.594 276 147 10 86 349 31 290 9.60e-42 160
Msa1338370 MtrunA17_Chr7g0249431 28.931 159 86 5 460 592 90 247 7.61e-12 68.6
Msa1338370 MtrunA17_Chr4g0038311 28.169 426 266 12 101 499 48 460 1.96e-41 158
Msa1338370 MtrunA17_Chr4g0038311 26.645 304 198 11 510 796 165 460 4.77e-18 88.2
Msa1338370 MtrunA17_Chr4g0009681 29.322 457 266 18 72 495 29 461 3.46e-41 157
Msa1338370 MtrunA17_Chr2g0285381 28.132 423 266 12 103 499 53 463 1.25e-40 155
Msa1338370 MtrunA17_Chr3g0093971 28.095 420 273 9 103 501 43 454 3.67e-40 154
Msa1338370 MtrunA17_Chr1g0199991 26.651 424 269 14 101 499 47 453 9.98e-40 153
Msa1338370 MtrunA17_Chr1g0199991 26.000 300 198 12 510 796 165 453 3.12e-18 88.6
Msa1338370 MtrunA17_Chr4g0009711 28.502 414 247 14 115 496 69 465 1.08e-39 153
Msa1338370 MtrunA17_Chr3g0126031 27.419 434 268 14 98 501 39 455 1.24e-39 153
Msa1338370 MtrunA17_Chr3g0126031 23.625 309 202 7 510 796 157 453 2.33e-16 82.8
Msa1338370 MtrunA17_Chr7g0219051 27.231 437 252 15 103 499 51 461 4.59e-39 151
Msa1338370 MtrunA17_Chr4g0009701 27.830 424 262 14 103 496 56 465 1.43e-38 150
Msa1338370 MtrunA17_Chr3g0118891 27.252 444 239 13 79 500 74 455 1.60e-38 149
Msa1338370 MtrunA17_Chr3g0118891 22.408 299 176 7 510 800 208 458 5.49e-12 68.9
Msa1338370 MtrunA17_Chr2g0281621 26.037 434 266 12 101 499 49 462 1.61e-38 149
Msa1338370 MtrunA17_Chr4g0009651 27.511 458 275 17 72 496 32 465 2.13e-38 149
Msa1338370 MtrunA17_Chr3g0126051 27.880 434 278 14 93 501 39 462 3.01e-38 149
Msa1338370 MtrunA17_Chr4g0009661 26.932 453 284 15 72 496 32 465 3.60e-38 149
Msa1338370 MtrunA17_Chr4g0009671 26.812 414 254 13 115 496 34 430 1.17e-37 146
Msa1338370 MtrunA17_Chr3g0118861 27.674 430 228 14 101 500 90 466 7.54e-37 145
Msa1338370 MtrunA17_Chr1g0199971 25.587 426 271 12 101 499 47 453 7.81e-37 144
Msa1338370 MtrunA17_Chr1g0199971 25.497 302 197 11 510 796 165 453 2.60e-18 88.6
Msa1338370 MtrunA17_Chr4g0068861 28.571 385 214 13 95 436 93 459 7.87e-36 142
Msa1338370 MtrunA17_Chr4g0068861 24.046 262 163 8 510 742 214 468 1.09e-12 71.2
Msa1338370 MtrunA17_Chr3g0133011 25.727 447 284 11 86 496 57 491 2.99e-35 140
Msa1338370 MtrunA17_Chr7g0234041 36.296 270 133 9 86 349 30 266 8.60e-34 135
Msa1338370 MtrunA17_Chr4g0009641 25.566 442 272 16 76 496 36 441 4.12e-32 130
Msa1338370 MtrunA17_Chr4g0027731 26.824 425 256 12 114 497 44 454 8.62e-32 129
Msa1338370 MtrunA17_Chr4g0027731 23.077 312 211 7 510 794 145 454 4.57e-12 69.3
Msa1338370 MtrunA17_Chr1g0165811 35.000 220 131 6 103 319 46 256 1.18e-31 124
Msa1338370 MtrunA17_Chr1g0153931 39.053 169 98 5 101 265 90 257 1.88e-31 124
Msa1338370 MtrunA17_Chr2g0281641 24.495 396 247 10 138 499 7 384 1.56e-30 124
Msa1338370 MtrunA17_Chr2g0279371 32.418 182 99 3 74 250 19 181 2.05e-27 110
Msa1338370 MtrunA17_Chr2g0320571 26.304 460 278 14 84 492 11 460 5.53e-24 106
Msa1338370 MtrunA17_Chr2g0320571 24.921 317 198 8 511 789 146 460 6.21e-12 68.9
Msa1338370 MtrunA17_Chr1g0204191 24.829 439 230 21 103 499 107 487 1.47e-22 102
Msa1338370 MtrunA17_Chr4g0009721 23.709 426 205 16 115 496 65 414 1.89e-20 94.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1338370 AT3G45010.1 66.068 501 160 5 12 505 8 505 0.0 689
Msa1338370 AT3G45010.1 66.212 293 95 2 509 799 212 502 4.60e-137 416
Msa1338370 AT3G10410.1 62.795 508 166 6 5 502 4 498 0.0 674
Msa1338370 AT3G10410.1 61.938 289 108 1 509 797 210 496 7.71e-127 390
Msa1338370 AT5G22980.1 62.450 498 176 5 13 503 5 498 0.0 643
Msa1338370 AT5G22980.1 65.411 292 99 1 509 800 209 498 4.73e-130 398
Msa1338370 AT5G22960.1 62.874 167 42 2 95 261 28 174 2.25e-65 216
Msa1338370 AT5G22960.1 81.250 48 9 0 509 556 127 174 4.48e-19 86.3
Msa1338370 AT1G15000.1 30.488 410 262 9 97 499 31 424 6.03e-52 188
Msa1338370 AT1G15000.1 28.621 290 187 8 510 796 152 424 2.88e-23 104
Msa1338370 AT1G73300.1 29.291 437 253 14 86 499 36 439 2.19e-50 183
Msa1338370 AT1G73300.1 22.892 332 222 11 479 796 128 439 4.35e-16 82.0
Msa1338370 AT1G73300.2 29.291 437 253 14 86 499 36 439 2.19e-50 183
Msa1338370 AT1G73300.2 22.892 332 222 11 479 796 128 439 4.35e-16 82.0
Msa1338370 AT3G25420.1 28.541 466 253 13 101 501 44 494 4.17e-50 184
Msa1338370 AT3G25420.1 24.069 349 186 14 510 796 161 492 2.78e-14 76.6
Msa1338370 AT3G12203.3 27.854 438 264 16 89 499 2 414 5.25e-50 182
Msa1338370 AT3G12203.3 22.867 293 200 10 510 796 142 414 2.30e-17 85.9
Msa1338370 AT3G12203.1 27.854 438 264 16 89 499 23 435 6.46e-50 182
Msa1338370 AT3G12203.1 22.867 293 200 10 510 796 163 435 2.89e-17 85.9
Msa1338370 AT2G22920.2 29.252 441 271 16 73 498 18 432 1.81e-48 178
Msa1338370 AT2G22920.2 21.502 293 205 9 510 795 158 432 4.88e-16 82.0
Msa1338370 AT3G12203.2 28.358 402 245 15 116 499 1 377 3.41e-48 176
Msa1338370 AT3G12203.2 22.867 293 200 10 510 796 105 377 1.36e-17 86.3
Msa1338370 AT2G22970.1 28.507 442 273 16 73 499 18 431 3.95e-48 177
Msa1338370 AT2G22970.1 22.654 309 206 11 498 796 146 431 3.45e-17 85.5
Msa1338370 AT5G36180.1 28.798 441 252 15 85 499 35 439 2.04e-47 175
Msa1338370 AT5G36180.1 22.789 294 200 10 510 796 166 439 2.09e-14 77.0
Msa1338370 AT1G73280.1 28.375 437 259 16 85 499 35 439 2.25e-47 175
Msa1338370 AT1G73280.1 22.124 339 224 11 475 796 124 439 2.26e-15 79.7
Msa1338370 AT3G17180.1 28.894 443 254 15 98 499 50 472 3.47e-47 175
Msa1338370 AT3G17180.1 24.074 324 190 10 509 796 169 472 1.35e-18 90.1
Msa1338370 AT1G73290.1 27.356 435 262 14 86 499 35 436 4.65e-47 174
Msa1338370 AT1G73290.1 21.751 354 234 12 460 796 109 436 1.43e-14 77.4
Msa1338370 AT4G12910.1 28.216 482 258 15 86 501 38 497 1.78e-46 174
Msa1338370 AT4G12910.1 23.626 364 198 13 494 795 149 494 1.47e-16 84.0
Msa1338370 AT2G22980.1 28.315 445 267 18 73 499 18 428 3.74e-46 171
Msa1338370 AT2G22980.1 22.222 306 207 12 498 796 147 428 4.89e-15 79.0
Msa1338370 AT5G23210.1 29.933 451 249 15 101 503 65 496 5.09e-46 172
Msa1338370 AT5G23210.1 25.697 323 192 12 510 796 182 492 1.46e-18 90.1
Msa1338370 AT1G73270.2 25.977 435 276 13 85 501 35 441 1.22e-45 170
Msa1338370 AT1G73270.2 21.886 297 199 10 510 796 166 439 3.95e-15 79.3
Msa1338370 AT1G73270.1 25.977 435 276 13 85 501 35 441 1.34e-45 170
Msa1338370 AT1G73270.1 21.886 297 199 10 510 796 166 439 5.36e-15 79.0
Msa1338370 AT3G52000.1 28.125 416 261 11 101 497 78 474 1.64e-45 171
Msa1338370 AT3G52000.1 26.490 302 186 11 510 794 192 474 2.57e-17 86.3
Msa1338370 AT2G23010.2 27.578 446 276 15 73 499 18 435 1.84e-45 169
Msa1338370 AT2G23010.2 21.959 296 199 10 513 796 160 435 6.61e-14 75.5
Msa1338370 AT2G23010.1 27.578 446 276 15 73 499 18 435 4.61e-45 168
Msa1338370 AT2G23010.1 21.959 296 199 10 513 796 160 435 1.50e-13 74.3
Msa1338370 AT3G10450.1 27.945 433 266 16 85 499 31 435 7.93e-45 167
Msa1338370 AT3G10450.1 23.810 294 197 11 510 796 162 435 2.10e-16 83.2
Msa1338370 AT1G73310.1 27.918 437 259 14 86 499 36 439 8.19e-45 167
Msa1338370 AT1G73310.1 22.222 297 198 11 510 796 166 439 3.96e-14 75.9
Msa1338370 AT4G15100.1 28.306 431 265 14 101 498 58 477 1.39e-44 168
Msa1338370 AT4G15100.1 24.214 318 195 12 510 795 174 477 2.00e-17 86.7
Msa1338370 AT2G22920.1 29.851 402 243 14 73 460 18 394 1.64e-44 166
Msa1338370 AT2G22920.1 21.888 233 164 6 510 736 158 378 9.31e-13 71.6
Msa1338370 AT3G10450.2 27.603 413 257 14 105 499 4 392 3.74e-44 164
Msa1338370 AT3G10450.2 23.810 294 197 11 510 796 119 392 2.43e-16 82.4
Msa1338370 AT4G30810.1 28.111 434 263 13 99 503 50 463 4.22e-44 166
Msa1338370 AT2G22970.3 28.810 420 257 15 73 477 18 410 4.98e-44 165
Msa1338370 AT2G22970.3 24.194 248 162 8 498 736 146 376 7.43e-14 75.1
Msa1338370 AT4G12910.2 36.059 269 150 6 86 349 38 289 5.21e-44 166
Msa1338370 AT4G12910.2 38.095 105 60 2 494 594 149 252 3.60e-13 73.2
Msa1338370 AT1G28110.1 28.671 429 256 18 101 498 45 454 7.22e-44 165
Msa1338370 AT1G28110.2 28.671 429 256 18 101 498 45 454 7.22e-44 165
Msa1338370 AT1G73290.3 28.877 374 219 11 86 439 35 381 8.21e-44 164
Msa1338370 AT1G73290.3 22.867 293 190 9 460 736 109 381 1.33e-12 70.9
Msa1338370 AT2G22970.4 28.640 419 257 15 73 476 18 409 1.03e-43 164
Msa1338370 AT2G22970.4 24.194 248 162 8 498 736 146 376 3.74e-14 75.9
Msa1338370 AT3G63470.1 29.356 419 243 15 101 492 95 487 1.17e-43 166
Msa1338370 AT3G63470.1 24.590 305 198 10 502 789 198 487 5.36e-14 75.9
Msa1338370 AT2G33530.1 28.474 439 248 18 101 499 47 459 1.60e-43 164
Msa1338370 AT1G33540.1 27.460 437 258 15 103 499 45 462 1.71e-43 164
Msa1338370 AT1G33540.2 27.356 435 257 15 105 499 4 419 5.26e-43 162
Msa1338370 AT3G52020.1 28.205 429 248 13 101 497 93 493 7.68e-43 163
Msa1338370 AT2G22980.4 28.182 440 264 18 73 494 18 423 9.22e-43 161
Msa1338370 AT2G22980.4 21.502 293 200 11 498 783 147 416 2.82e-12 70.1
Msa1338370 AT5G08260.1 30.345 435 239 17 101 492 53 466 1.05e-42 162
Msa1338370 AT5G08260.1 25.321 312 194 9 510 793 170 470 2.93e-16 82.8
Msa1338370 AT2G22980.2 28.199 422 252 17 73 476 18 406 1.21e-42 160
Msa1338370 AT2G22980.2 21.908 283 191 11 498 773 147 406 2.72e-12 70.1
Msa1338370 AT2G35770.1 29.829 409 248 13 103 489 54 445 1.88e-42 161
Msa1338370 AT2G35770.1 23.920 301 200 7 504 786 156 445 1.51e-15 80.5
Msa1338370 AT2G22990.1 26.498 434 271 14 86 499 26 431 2.83e-42 160
Msa1338370 AT2G22990.1 21.639 305 209 10 502 796 147 431 9.59e-16 80.9
Msa1338370 AT2G23000.1 27.149 442 265 13 90 499 19 435 6.35e-42 159
Msa1338370 AT2G23000.1 22.517 302 196 11 510 796 157 435 1.34e-13 74.3
Msa1338370 AT2G23000.2 27.149 442 265 13 90 499 19 435 6.35e-42 159
Msa1338370 AT2G23000.2 22.517 302 196 11 510 796 157 435 1.34e-13 74.3
Msa1338370 AT3G12240.1 28.153 444 249 19 86 499 31 434 8.38e-42 159
Msa1338370 AT3G12240.1 24.430 307 203 12 498 796 149 434 1.03e-12 71.6
Msa1338370 AT3G52010.1 27.934 426 268 12 92 497 73 479 2.49e-41 159
Msa1338370 AT3G52010.1 24.161 298 198 10 510 794 197 479 2.30e-13 73.9
Msa1338370 AT1G61130.1 28.176 433 255 15 101 498 45 456 2.76e-41 158
Msa1338370 AT1G61130.1 23.529 306 204 9 510 795 161 456 7.98e-17 84.7
Msa1338370 AT1G73310.2 28.000 400 234 12 86 463 36 403 5.10e-41 156
Msa1338370 AT1G73310.2 23.176 233 153 8 513 736 169 384 4.66e-11 66.2
Msa1338370 AT5G23210.3 30.790 367 196 12 101 421 65 419 6.99e-41 157
Msa1338370 AT5G23210.3 44.186 86 47 1 510 594 182 267 3.73e-15 79.3
Msa1338370 AT3G12230.1 28.111 434 262 17 86 499 30 433 7.27e-41 156
Msa1338370 AT3G12230.1 23.826 298 192 12 510 796 160 433 3.77e-12 69.7
Msa1338370 AT3G12220.1 25.935 428 283 14 86 501 30 435 8.00e-41 156
Msa1338370 AT3G12220.1 20.736 299 202 11 510 797 160 434 3.14e-11 67.0
Msa1338370 AT1G11080.1 26.984 441 260 12 101 498 64 485 8.21e-41 157
Msa1338370 AT1G11080.1 22.956 318 201 10 510 795 180 485 3.07e-14 76.6
Msa1338370 AT1G11080.2 26.984 441 260 12 101 498 64 485 8.46e-41 157
Msa1338370 AT1G11080.2 22.956 318 201 10 510 795 180 485 3.07e-14 76.6
Msa1338370 AT2G24000.1 27.506 429 261 16 103 498 46 457 9.42e-41 156
Msa1338370 AT2G24000.1 25.000 316 190 11 509 795 160 457 4.37e-18 88.6
Msa1338370 AT1G73290.2 32.353 272 159 7 86 343 35 295 1.27e-40 152
Msa1338370 AT3G10450.4 27.805 410 251 15 85 476 31 413 1.42e-40 155
Msa1338370 AT3G10450.4 22.628 274 180 10 510 773 162 413 6.39e-12 68.9
Msa1338370 AT3G12220.2 25.428 409 275 12 105 501 15 405 3.49e-40 153
Msa1338370 AT3G12220.2 20.736 299 202 11 510 797 130 404 3.50e-11 66.6
Msa1338370 AT2G24010.1 28.235 425 255 15 103 499 46 448 4.75e-40 154
Msa1338370 AT2G24010.1 26.174 298 190 9 515 796 165 448 1.03e-18 90.5
Msa1338370 AT3G10450.3 27.436 390 242 13 105 476 4 370 6.32e-40 152
Msa1338370 AT3G10450.3 22.628 274 180 10 510 773 119 370 7.25e-12 68.6
Msa1338370 AT5G42230.1 28.505 428 265 16 101 499 42 457 6.41e-40 154
Msa1338370 AT5G42230.2 28.505 428 265 16 101 499 42 457 6.41e-40 154
Msa1338370 AT3G07990.1 28.436 422 270 13 98 499 45 454 1.49e-39 153
Msa1338370 AT3G07990.1 24.595 309 191 9 510 796 166 454 5.58e-18 88.2
Msa1338370 AT1G43780.1 27.880 434 257 17 103 499 53 467 1.71e-39 153
Msa1338370 AT1G43780.1 24.138 319 193 14 510 796 166 467 4.70e-14 75.9
Msa1338370 AT2G12480.3 27.619 420 273 13 103 501 47 456 3.49e-39 152
Msa1338370 AT2G12480.3 23.934 305 204 12 510 796 160 454 2.03e-13 73.9
Msa1338370 AT4G30610.1 25.874 429 277 11 99 499 44 459 7.92e-39 151
Msa1338370 AT4G30610.1 23.701 308 203 8 510 796 163 459 6.51e-19 91.3
Msa1338370 AT2G22990.4 26.506 415 256 13 86 478 26 413 1.06e-38 149
Msa1338370 AT2G22990.4 21.329 286 194 9 502 775 147 413 2.66e-12 70.1
Msa1338370 AT2G12480.4 27.628 409 263 12 103 501 47 432 1.25e-38 150
Msa1338370 AT2G12480.4 23.891 293 195 10 510 796 160 430 4.14e-13 72.8
Msa1338370 AT2G22990.3 26.521 411 255 13 86 476 26 409 1.31e-38 150
Msa1338370 AT2G22990.3 20.922 282 194 9 502 773 147 409 5.68e-12 69.3
Msa1338370 AT3G17180.2 29.306 389 220 13 98 446 50 423 1.40e-38 149
Msa1338370 AT3G17180.2 32.258 124 70 3 509 628 169 282 4.74e-12 69.3
Msa1338370 AT2G22920.4 32.803 314 181 11 73 375 18 312 2.70e-38 145
Msa1338370 AT5G42240.1 26.636 428 277 15 101 501 46 463 7.19e-38 148
Msa1338370 AT2G12480.1 26.667 405 270 11 103 501 47 430 8.56e-38 147
Msa1338370 AT2G12480.1 24.573 293 191 12 510 796 160 428 2.92e-12 70.1
Msa1338370 AT1G73280.2 32.026 306 173 9 85 375 35 320 1.23e-37 145
Msa1338370 AT5G09640.1 25.160 469 285 17 73 499 19 463 1.38e-37 147
Msa1338370 AT2G22970.2 32.484 314 181 11 73 375 18 311 2.16e-37 143
Msa1338370 AT2G12480.2 26.601 406 270 11 103 501 47 431 2.61e-37 146
Msa1338370 AT2G12480.2 24.490 294 191 12 510 796 160 429 3.17e-11 67.0
Msa1338370 AT5G23210.5 29.298 413 226 14 138 503 8 401 2.17e-36 142
Msa1338370 AT5G23210.5 25.697 323 192 12 510 796 87 397 7.06e-19 90.5
Msa1338370 AT2G22990.5 24.700 417 261 13 103 499 39 422 6.48e-36 141
Msa1338370 AT2G22990.5 21.639 305 209 10 502 796 138 422 3.87e-16 82.0
Msa1338370 AT3G02110.1 26.651 439 257 14 103 499 53 468 6.53e-36 142
Msa1338370 AT2G22980.3 31.329 316 181 11 73 375 18 310 7.43e-36 139
Msa1338370 AT5G23210.2 29.126 412 226 14 139 503 8 400 9.96e-36 140
Msa1338370 AT5G23210.2 25.697 323 192 12 510 796 86 396 6.68e-19 90.5
Msa1338370 AT2G24010.2 27.273 440 255 17 103 499 46 463 1.13e-35 142
Msa1338370 AT2G24010.2 26.174 298 190 9 515 796 180 463 1.16e-18 90.5
Msa1338370 AT2G35780.1 25.701 428 270 11 99 499 42 448 1.69e-35 140
Msa1338370 AT2G35780.1 24.752 303 196 10 510 796 162 448 2.08e-16 83.2
Msa1338370 AT2G05850.1 26.376 436 287 15 78 497 62 479 2.99e-35 140
Msa1338370 AT2G05850.1 22.000 300 202 9 510 794 197 479 8.33e-13 72.0
Msa1338370 AT2G24010.3 26.797 459 258 19 103 499 17 459 1.74e-32 132
Msa1338370 AT2G24010.3 24.149 323 190 10 515 796 151 459 2.10e-14 77.0
Msa1338370 AT3G12220.3 33.333 222 137 6 86 301 30 246 5.30e-32 129
Msa1338370 AT3G56540.1 42.553 141 78 3 101 239 93 232 4.71e-31 123
Msa1338370 AT1G73280.4 25.706 354 218 11 163 499 12 337 5.52e-31 125
Msa1338370 AT1G73280.4 22.124 339 224 11 475 796 22 337 9.24e-16 80.1
Msa1338370 AT5G36180.5 26.536 358 210 11 163 499 12 337 9.74e-31 124
Msa1338370 AT5G36180.5 22.789 294 200 10 510 796 64 337 7.57e-15 77.4
Msa1338370 AT5G36180.3 26.536 358 210 11 163 499 12 337 9.74e-31 124
Msa1338370 AT5G36180.3 22.789 294 200 10 510 796 64 337 7.57e-15 77.4
Msa1338370 AT5G23210.4 29.878 328 173 11 139 421 8 323 1.24e-30 124
Msa1338370 AT5G23210.4 44.186 86 47 1 510 594 86 171 1.51e-15 79.7
Msa1338370 AT2G24010.4 34.101 217 121 7 103 299 17 231 2.29e-27 115
Msa1338370 AT2G24010.4 40.426 94 54 2 515 606 151 244 3.27e-12 69.3
Msa1338370 AT1G73280.3 24.706 340 211 11 177 499 1 312 4.13e-27 113
Msa1338370 AT1G73280.3 22.090 335 221 11 479 796 1 312 2.69e-15 78.2
Msa1338370 AT5G36180.2 26.269 335 195 10 163 476 12 315 7.30e-27 112
Msa1338370 AT5G36180.2 23.478 230 156 7 513 736 67 282 9.91e-11 64.3
Msa1338370 AT2G22990.2 23.529 340 221 10 175 499 2 317 1.45e-26 111
Msa1338370 AT2G22990.2 21.639 305 209 10 502 796 33 317 1.28e-16 82.4
Msa1338370 AT5G36180.4 27.160 324 183 10 163 465 12 303 1.54e-26 112
Msa1338370 AT2G22990.6 23.529 340 221 10 175 499 2 317 3.30e-26 110
Msa1338370 AT2G22990.6 21.639 305 209 10 502 796 33 317 3.43e-16 80.9
Msa1338370 AT2G27920.1 25.891 421 257 15 114 492 45 452 6.52e-26 112
Msa1338370 AT2G27920.1 22.756 312 202 8 510 789 148 452 2.70e-11 67.0
Msa1338370 AT1G73310.3 25.157 318 193 8 163 463 12 301 9.12e-25 106
Msa1338370 AT1G73310.3 23.176 233 153 8 513 736 67 282 4.07e-11 65.9
Msa1338370 AT2G22980.5 24.522 314 199 10 175 476 2 289 6.60e-24 103
Msa1338370 AT2G22980.5 21.908 283 191 11 498 773 30 289 1.83e-12 69.3
Msa1338370 AT2G27920.2 25.897 390 228 15 145 492 10 380 1.34e-19 92.4
Msa1338370 AT2G27920.2 22.756 312 202 8 510 789 76 380 2.15e-11 67.0
Msa1338370 AT2G27920.3 25.143 350 209 13 184 492 48 385 1.58e-14 77.0
Msa1338370 AT2G27920.3 22.756 312 202 8 510 789 81 385 1.85e-11 67.4

Find 175 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAAATGGCATCATCTTTA+AGG 0.114112 tig0002041:-50124 Msa1338370:exon
ATCATTCTCTGGTGTGTTTA+TGG 0.125077 tig0002041:+49929 None:intergenic
TCTTCACTATCAACCAAATA+TGG 0.169918 tig0002041:+46931 None:intergenic
ATACAACAAGAATGTGATTT+TGG 0.197079 tig0002041:+43315 None:intergenic
GTCTCCTACAACCCCATATT+TGG 0.211172 tig0002041:-46944 Msa1338370:CDS
TATGCCTTGTACTGAATTTC+CGG 0.228537 tig0002041:+47906 None:intergenic
ATAATACCTTTAGATTTATA+TGG 0.239565 tig0002041:+44661 None:intergenic
TATGCCATGTACTGAATTTC+AGG 0.244869 tig0002041:+44461 None:intergenic
TCCCTTGTTTGGAATGAATA+TGG 0.250663 tig0002041:-49077 Msa1338370:CDS
CACAAGATTCTATAGCCTTT+TGG 0.276751 tig0002041:+47808 None:intergenic
AGCTTTAGGTGTTGGGGACT+TGG 0.302455 tig0002041:-47384 Msa1338370:CDS
TTATCCTTGGAGAATTTAAA+AGG 0.303425 tig0002041:+49107 None:intergenic
AGGATGACCCTGTTGTTATA+TGG 0.306709 tig0002041:-49184 Msa1338370:CDS
GTCAGGTCAGACAACATTTA+AGG 0.308088 tig0002041:-43642 Msa1338370:CDS
ATAAGAACTTGTCCCTTGTT+TGG 0.312379 tig0002041:-49088 Msa1338370:CDS
CACTTCAAATGTTACAAGAT+TGG 0.313206 tig0002041:-43367 Msa1338370:CDS
AATAAACAGGGCTTTGCTAT+TGG 0.339075 tig0002041:-44500 Msa1338370:intron
AGACAATGGACTGATTAATA+AGG 0.347573 tig0002041:-44423 Msa1338370:CDS
CCTGTTGTTATATGGTTAAC+TGG 0.347839 tig0002041:-49176 Msa1338370:CDS
TGGACCTTTGGCTTTCCTTA+AGG 0.353120 tig0002041:-43561 Msa1338370:intron
CAGGGCTTTGCTATTGGTAA+TGG 0.354719 tig0002041:-44494 Msa1338370:CDS
AGACAATGGACTAATTAATA+AGG 0.356998 tig0002041:-47868 Msa1338370:CDS
CTCATTTGGTAGGGAATTCA+AGG 0.357235 tig0002041:-43685 Msa1338370:intron
AACATCTGAAGTGCAGCTTT+TGG 0.363126 tig0002041:+46571 None:intergenic
CTCATTTGGCAGGGAATTCA+AGG 0.370455 tig0002041:-47011 Msa1338370:intron
CACTTCAGATGTTAAAAGAT+TGG 0.373515 tig0002041:-46561 Msa1338370:CDS
CTTCACTATCAACCAAATAT+GGG 0.374075 tig0002041:+46932 None:intergenic
TAAAGGAAGCTTTAGGTGTT+GGG 0.376899 tig0002041:-43933 Msa1338370:CDS
CGATCTATATGACTTCTTGC+AGG 0.377801 tig0002041:-48404 Msa1338370:intron
TAAGGGAAGCTTTAGGTGTT+GGG 0.379195 tig0002041:-47391 Msa1338370:CDS
CCATTGTCTAATGCAAAATC+TGG 0.382981 tig0002041:+47882 None:intergenic
CCAGTTAACCATATAACAAC+AGG 0.402521 tig0002041:+49176 None:intergenic
AGTATACAGTGCCATGTTGC+AGG 0.410064 tig0002041:-47339 Msa1338370:CDS
TGTCTGACCTGACCACTTCA+TGG 0.416219 tig0002041:+43652 None:intergenic
ACAGCATACATTAGTGTTGC+TGG 0.418045 tig0002041:+44139 None:intergenic
GAGGAGAATGTCATTGTTTG+TGG 0.420601 tig0002041:+50028 None:intergenic
AAGAAATGTGAGGGAGCTTT+CGG 0.426372 tig0002041:-44006 Msa1338370:CDS
AAGGGACAAGTTCTTATCCT+TGG 0.432855 tig0002041:+49094 None:intergenic
GTAGACCAACCCACTGGAAC+AGG 0.438401 tig0002041:-48484 Msa1338370:CDS
GGCTGGTCACATGGTTCCTA+TGG 0.441603 tig0002041:-43405 Msa1338370:CDS
GGCTGGTCACATGGTTCCTA+TGG 0.441603 tig0002041:-46599 Msa1338370:CDS
TTTGATTTGTTAGGCACTAA+AGG 0.444714 tig0002041:-47677 Msa1338370:intron
GGTGTGTTTATGGAATCTTT+TGG 0.445106 tig0002041:+49939 None:intergenic
CTTTGAATCTCGAAACACTA+AGG 0.445707 tig0002041:-49204 Msa1338370:CDS
AACATTTGAAGTGCAACTTT+TGG 0.446825 tig0002041:+43377 None:intergenic
TCAACCAAATATGGGGTTGT+AGG 0.451088 tig0002041:+46940 None:intergenic
AAGAAGATCTCATATGCAAT+TGG 0.456279 tig0002041:-47241 Msa1338370:CDS
GAAAAGAAGTTCACTTTCCC+TGG 0.457022 tig0002041:-49879 Msa1338370:CDS
ATCAAGGTGCTTGTGTATGC+TGG 0.464364 tig0002041:-47266 Msa1338370:CDS
AAGACAGTAAAGGAAGCTTT+AGG 0.467806 tig0002041:-43940 Msa1338370:CDS
CACATTTCTTTCTAATGTCG+TGG 0.467856 tig0002041:+44019 None:intergenic
CAAGCAGAAAATCTCATAAG+AGG 0.468099 tig0002041:-49975 Msa1338370:CDS
GGTGCTTCTGTTGAAGAACT+TGG 0.468257 tig0002041:-49843 Msa1338370:CDS
TCATTGTTTGTGGGATAAGC+TGG 0.472247 tig0002041:+50038 None:intergenic
TCTTGAACATGAAGACAGTA+AGG 0.472336 tig0002041:-47409 Msa1338370:CDS
ATTCCTGCTCTTCTTGAGGA+TGG 0.475493 tig0002041:-43832 Msa1338370:CDS
ATTCCTGCTCTTCTTGAGGA+TGG 0.475493 tig0002041:-47290 Msa1338370:CDS
TTTGGAACAATAGGTGAAAG+AGG 0.477010 tig0002041:-43426 Msa1338370:intron
CATGTACTGAATTTCAGGAT+TGG 0.477634 tig0002041:+44466 None:intergenic
GTAAAGGAAGCTTTAGGTGT+TGG 0.480724 tig0002041:-43934 Msa1338370:CDS
GTAAGGGAAGCTTTAGGTGT+TGG 0.480724 tig0002041:-47392 Msa1338370:CDS
TTGGTTGATAGTGAAGAAGC+AGG 0.484292 tig0002041:-46925 Msa1338370:CDS
CGGACCTCTTGCTTTCCTCA+AGG 0.484984 tig0002041:-46887 Msa1338370:intron
TTGGTTGATAGTGAAGAAGC+AGG 0.485779 tig0002041:-43599 Msa1338370:CDS
GTTCAAGAATGTTTCCGCAT+TGG 0.488329 tig0002041:+47424 None:intergenic
ACAGTGCCATGTTGCAGGAT+TGG 0.491110 tig0002041:-47334 Msa1338370:CDS
TACCTTGCAGCTTCGGAATG+AGG 0.492745 tig0002041:+49795 None:intergenic
TGAAATATTTGATCAGATCA+TGG 0.497168 tig0002041:-47618 Msa1338370:CDS
AGGAATCCATATAAATCTAA+AGG 0.501724 tig0002041:-44667 Msa1338370:intron
AGGAATTCATATAAATCTAA+AGG 0.501724 tig0002041:-48067 Msa1338370:intron
AAGACAGTAAGGGAAGCTTT+AGG 0.503912 tig0002041:-47398 Msa1338370:CDS
CAATCCTGAAATTCAGTACA+TGG 0.506627 tig0002041:-44465 Msa1338370:CDS
ACAAAATGAGGATCATTCTC+TGG 0.506628 tig0002041:+49918 None:intergenic
CTTGTACTGAATTTCCGGAT+TGG 0.507308 tig0002041:+47911 None:intergenic
CAAGGAAACAAGGCAAAAGA+AGG 0.507437 tig0002041:-48087 Msa1338370:CDS
GGGTATTCCTGCTCTTCTTG+AGG 0.508272 tig0002041:-43836 Msa1338370:CDS
GGGTATTCCTGCTCTTCTTG+AGG 0.508272 tig0002041:-47294 Msa1338370:CDS
GCAATTTCACTGCTGCATCC+TGG 0.508823 tig0002041:+49149 None:intergenic
ATTTATCTGTTAGGCACTGA+AGG 0.510266 tig0002041:-44227 Msa1338370:intron
GTTGATGCCATGACGTGGTC+AGG 0.511223 tig0002041:-46985 Msa1338370:CDS
GTTGATCCCACCATGTCAAA+AGG 0.513170 tig0002041:-44378 Msa1338370:CDS
AATCATTCTTTGTGAACTGA+GGG 0.514863 tig0002041:+44772 None:intergenic
GGATGCAAGGGAAACTGATA+AGG 0.515489 tig0002041:-46540 Msa1338370:CDS
ATGTCCAGCGTATGACTCTC+CGG 0.523072 tig0002041:+44740 None:intergenic
CTTAGTATACCTTGCCATGT+CGG 0.523286 tig0002041:-43884 Msa1338370:CDS
CAAGGAAACAAAGCAAAAGA+AGG 0.523553 tig0002041:-44687 Msa1338370:CDS
TGAACCCTAGATGCAAAAGC+TGG 0.524049 tig0002041:+48111 None:intergenic
GATCAGATCATGGACATAGC+TGG 0.524377 tig0002041:-47608 Msa1338370:CDS
ATATGGTTAACTGGAGGGCC+AGG 0.526048 tig0002041:-49167 Msa1338370:CDS
ATTCCATCCTCAAGAAGAGC+AGG 0.526347 tig0002041:+43829 None:intergenic
ATTCCATCCTCAAGAAGAGC+AGG 0.526347 tig0002041:+47287 None:intergenic
GTTGTTCCCACGATGCCAAA+AGG 0.528378 tig0002041:-47823 Msa1338370:CDS
TGGTAATGGATTAACCAATC+CGG 0.528504 tig0002041:-47925 Msa1338370:CDS
ATGTCCAGCGTATGATTCTC+CGG 0.529003 tig0002041:+48140 None:intergenic
AAGATGATGCAGTTGAAGAG+AGG 0.530703 tig0002041:+50009 None:intergenic
TCTTCTTGAGGATGGAATCA+AGG 0.531157 tig0002041:-47282 Msa1338370:CDS
GAACAATAGGTGAAAGAGGC+TGG 0.533723 tig0002041:-43422 Msa1338370:intron
GATCTAATATGCAATTGGCT+TGG 0.534093 tig0002041:-43778 Msa1338370:intron
GAAGAACTTGGTCATCATGC+AGG 0.536316 tig0002041:-49831 Msa1338370:CDS
TGAAACCTGTTCCAGTGGGT+TGG 0.537449 tig0002041:+48479 None:intergenic
TTACAAAAGACAGACACATT+CGG 0.540692 tig0002041:+50096 None:intergenic
ATGTTAAAAGATTGGATGCA+AGG 0.542286 tig0002041:-46553 Msa1338370:CDS
GTTGATGCCATGAAGTGGTC+AGG 0.543073 tig0002041:-43659 Msa1338370:CDS
CTTGAACATGAAGACAGTAA+AGG 0.545435 tig0002041:-43950 Msa1338370:CDS
ATGTTACAAGATTGGATGCA+AGG 0.545582 tig0002041:-43359 Msa1338370:CDS
AATCATTCTTAGTGAACTGA+GGG 0.546470 tig0002041:+48172 None:intergenic
AAATCATTCTTTGTGAACTG+AGG 0.546581 tig0002041:+44771 None:intergenic
CAATCCGGAAATTCAGTACA+AGG 0.549343 tig0002041:-47910 Msa1338370:CDS
GCACCAGAGTCAACAAAACC+AGG 0.549754 tig0002041:+49861 None:intergenic
TTGTTTGGAATGAATATGGA+TGG 0.552020 tig0002041:-49073 Msa1338370:CDS
AGGAGAATGTCATTGTTTGT+GGG 0.552520 tig0002041:+50029 None:intergenic
TGTTACAAGATTGGATGCAA+GGG 0.561679 tig0002041:-43358 Msa1338370:CDS
GACATTAGAAAGCAATGTGT+GGG 0.565208 tig0002041:-47467 Msa1338370:CDS
TGAACCCTAGATGCAAAAGC+TGG 0.566247 tig0002041:+44711 None:intergenic
TTGTTATATGGTTAACTGGA+GGG 0.566502 tig0002041:-49172 Msa1338370:CDS
CTGAAGGTGGACAAGCATGC+GGG 0.567233 tig0002041:-44211 Msa1338370:CDS
TTTGCATCTAGGGTTCATCA+AGG 0.567295 tig0002041:-48105 Msa1338370:CDS
GATCTCATATGCAATTGGCT+TGG 0.569300 tig0002041:-47236 Msa1338370:intron
TGTTAAAAGATTGGATGCAA+GGG 0.569319 tig0002041:-46552 Msa1338370:CDS
ATATTTCCATGAACAAAATG+AGG 0.569648 tig0002041:+49906 None:intergenic
AAAGGAAGCTTTAGGTGTTG+GGG 0.573810 tig0002041:-43932 Msa1338370:CDS
AAGGGAAGCTTTAGGTGTTG+GGG 0.573810 tig0002041:-47390 Msa1338370:CDS
TCAAATCATCCGACATGGCA+AGG 0.577763 tig0002041:+43875 None:intergenic
GTTGTTATATGGTTAACTGG+AGG 0.581708 tig0002041:-49173 Msa1338370:CDS
TTTGGCAGGGAATTCAAGGT+GGG 0.585910 tig0002041:-47007 Msa1338370:intron
TTCCTCATTCCGAAGCTGCA+AGG 0.587932 tig0002041:-49797 Msa1338370:intron
TGGGAACAACTTGTTGATGT+TGG 0.588848 tig0002041:+47836 None:intergenic
GGTGAAAGAGGCTGGTCACA+TGG 0.589518 tig0002041:-43414 Msa1338370:CDS
GGTGAAAGAGGCTGGTCACA+TGG 0.589518 tig0002041:-46608 Msa1338370:CDS
TTTGGTAGGGAATTCAAGGT+GGG 0.590648 tig0002041:-43681 Msa1338370:intron
AGAATGAATGTGAAATGAAG+AGG 0.598446 tig0002041:+50066 None:intergenic
TTCACTATCAACCAAATATG+GGG 0.599058 tig0002041:+46933 None:intergenic
ATATTTGTAGACCAACCCAC+TGG 0.600249 tig0002041:-48490 Msa1338370:CDS
GACATTAGAAAGAAATGTGA+GGG 0.603480 tig0002041:-44015 Msa1338370:CDS
ATCCATATTCATTCCAAACA+AGG 0.604369 tig0002041:+49075 None:intergenic
ACTGAAGGTGGACAAGCATG+CGG 0.605538 tig0002041:-44212 Msa1338370:CDS
TTTCATCCAATCCTGCAACA+TGG 0.613087 tig0002041:+47328 None:intergenic
TTTCATCAAATCATCCGACA+TGG 0.615842 tig0002041:+43870 None:intergenic
TGACATTAGAAAGCAATGTG+TGG 0.619542 tig0002041:-47468 Msa1338370:CDS
GATTTGTTAGGCACTAAAGG+TGG 0.621116 tig0002041:-47674 Msa1338370:intron
ACAGATTATGCATTAGACAA+TGG 0.621197 tig0002041:-44437 Msa1338370:CDS
AAATCATTCTTAGTGAACTG+AGG 0.624376 tig0002041:+48171 None:intergenic
CAAAAGGCTATAGAATCTTG+TGG 0.625610 tig0002041:-47807 Msa1338370:intron
TTGTCATGACTTCTCTGACA+TGG 0.627092 tig0002041:-43980 Msa1338370:CDS
TATCTGTTAGGCACTGAAGG+TGG 0.631703 tig0002041:-44224 Msa1338370:intron
ATTTGGTAGGGAATTCAAGG+TGG 0.632416 tig0002041:-43682 Msa1338370:intron
CTTGAACATGAAGACAGTAA+GGG 0.632455 tig0002041:-47408 Msa1338370:CDS
TAGCTGAAACCTGTTCCAGT+GGG 0.633323 tig0002041:+48475 None:intergenic
ATTTGGCAGGGAATTCAAGG+TGG 0.633794 tig0002041:-47008 Msa1338370:intron
ATAGCTGAAACCTGTTCCAG+TGG 0.637939 tig0002041:+48474 None:intergenic
GCAGGAGATCTGAAAAGCCA+CGG 0.638007 tig0002041:-46907 Msa1338370:CDS
TCCATATTCATTCCAAACAA+GGG 0.638155 tig0002041:+49076 None:intergenic
TCGAACGTCGCTATCATCAG+TGG 0.646032 tig0002041:+48450 None:intergenic
TAGGGTTCATCAAGGAAACA+AGG 0.646926 tig0002041:-48097 Msa1338370:CDS
AAGGGAAACTGATAAGGACA+AGG 0.660416 tig0002041:-46534 Msa1338370:CDS
CACCAGAGTCAACAAAACCA+GGG 0.660712 tig0002041:+49862 None:intergenic
CGACATTAGAAAGAAATGTG+AGG 0.664623 tig0002041:-44016 Msa1338370:CDS
AAACTGATAAGGACAAGGGG+AGG 0.667086 tig0002041:-46529 Msa1338370:CDS
AGGGAAACTGATAAGGACAA+GGG 0.667941 tig0002041:-46533 Msa1338370:CDS
TGAGGAAAGCAAGAGGTCCG+TGG 0.669417 tig0002041:+46890 None:intergenic
TGTTTGGAATGAATATGGAT+GGG 0.672561 tig0002041:-49072 Msa1338370:CDS
ATTACCGGAGAGTCATACGC+TGG 0.680484 tig0002041:-44744 Msa1338370:CDS
GAATGAATATGGATGGGACA+TGG 0.683982 tig0002041:-49066 Msa1338370:intron
GGTGGGTTGATGCCATGAAG+TGG 0.684602 tig0002041:-43664 Msa1338370:CDS
ATTACCGGAGAATCATACGC+TGG 0.686475 tig0002041:-48144 Msa1338370:CDS
GATCCCACCATGTCAAAAGG+CGG 0.688664 tig0002041:-44375 Msa1338370:CDS
GGGAAACTGATAAGGACAAG+GGG 0.694048 tig0002041:-46532 Msa1338370:CDS
CAAACCTTGAGGAAAGCAAG+AGG 0.699262 tig0002041:+46883 None:intergenic
GACGTTCGACATGATGAAGA+CGG 0.699400 tig0002041:-48436 Msa1338370:CDS
TTGTTACGACTTCTCCAATG+CGG 0.703377 tig0002041:-47438 Msa1338370:CDS
CAGTTAACCATATAACAACA+GGG 0.704037 tig0002041:+49177 None:intergenic
GGTGGGTTGATGCCATGACG+TGG 0.713542 tig0002041:-46990 Msa1338370:CDS
TTTGCATCTAGGGTTCACCA+AGG 0.714240 tig0002041:-44705 Msa1338370:CDS
CAAACCTTAAGGAAAGCCAA+AGG 0.725444 tig0002041:+43557 None:intergenic
CAAAAGACAGACACATTCGG+AGG 0.732115 tig0002041:+50099 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATAGAATGAAATATT+AGG - tig0002041:43718-43737 Msa1338370:intron 10.0%
!!! CATTCTATTTTATCTTATTT+TGG + tig0002041:43711-43730 None:intergenic 15.0%
!! AGCAAAGAATTTATAAAAAA+TGG - tig0002041:43855-43874 Msa1338370:CDS 15.0%
!! TTATAAAAAATGGAATAGTT+TGG - tig0002041:43865-43884 Msa1338370:CDS 15.0%
!!! TTTGATCTAGTTTAATTTAT+TGG - tig0002041:43902-43921 Msa1338370:CDS 15.0%
!!! AAAGTGTTTTTCTTAAAATT+CGG + tig0002041:44072-44091 None:intergenic 15.0%
!!! CTCTATTGATTTATATTAAT+TGG - tig0002041:44132-44151 Msa1338370:intron 15.0%
!! AGAAAAGAGAATAATTTAAT+AGG + tig0002041:44411-44430 None:intergenic 15.0%
!!! TTAGCTATTTTTACAATAAA+AGG + tig0002041:44676-44695 None:intergenic 15.0%
!!! AAGAATGATTTTTATATTAC+CGG - tig0002041:45290-45309 Msa1338370:intron 15.0%
!! TGTACATTATATTTATGTAA+AGG - tig0002041:45426-45445 Msa1338370:intron 15.0%
!! AAGAAAAAATAACAAGTAAA+TGG + tig0002041:45732-45751 None:intergenic 15.0%
!!! TACTTGTTATTTTTTCTTAT+TGG - tig0002041:45734-45753 Msa1338370:intron 15.0%
!!! AATTATAAGTTGGATTAATT+TGG - tig0002041:46351-46370 Msa1338370:intron 15.0%
!! TAAATCTAAGGATAAATAAT+AGG + tig0002041:47369-47388 None:intergenic 15.0%
!! TATTATTTATCCTTAGATTT+AGG - tig0002041:47368-47387 Msa1338370:CDS 15.0%
!!! AATAAATGATTTTCTAGTTT+TGG + tig0002041:47632-47651 None:intergenic 15.0%
!!! GATTTTATAGAGAATATATT+TGG + tig0002041:47954-47973 None:intergenic 15.0%
!! AGAAAGAAAAATCAAATAAT+AGG + tig0002041:48467-48486 None:intergenic 15.0%
!!! AAGAATGATTTTTATATTAC+CGG - tig0002041:45290-45309 Msa1338370:intron 15.0%
!! ATAATACCTTTAGATTTATA+TGG + tig0002041:45391-45410 None:intergenic 15.0%
!!! TTTCATCTTTTATAATAAAC+AGG - tig0002041:48936-48955 Msa1338370:intron 15.0%
!!! TTCATCTTTTATAATAAACA+GGG - tig0002041:48937-48956 Msa1338370:intron 15.0%
!!! TATATATTTTTTGGAACAAT+AGG - tig0002041:50014-50033 Msa1338370:CDS 15.0%
!!! AATATTAGGTAAGTTTTTTG+TGG - tig0002041:43732-43751 Msa1338370:intron 20.0%
!! CAGAATAAAAATATAGTTCT+TGG - tig0002041:43794-43813 Msa1338370:CDS 20.0%
!!! TTGTCATCAAATTCTTATTT+TGG + tig0002041:44112-44131 None:intergenic 20.0%
!!! ATTGCTATGTTTTATGAAAA+TGG - tig0002041:44318-44337 Msa1338370:intron 20.0%
!! TTTCATAAGCTATATTAGTT+TGG + tig0002041:44636-44655 None:intergenic 20.0%
!!! TTAAGTTGTTTATCCAAATA+TGG - tig0002041:44741-44760 Msa1338370:CDS 20.0%
!! AATTATTCACTTGTATTAAG+TGG - tig0002041:45139-45158 Msa1338370:intron 20.0%
!! AGGAATTCATATAAATCTAA+AGG - tig0002041:45382-45401 Msa1338370:intron 20.0%
!! TGTAAACCTTTATAATAAAC+AGG - tig0002041:45491-45510 Msa1338370:intron 20.0%
!! GTAAACCTTTATAATAAACA+GGG - tig0002041:45492-45511 Msa1338370:intron 20.0%
!!! TAGTTTGTATTTGATTTGTT+AGG - tig0002041:45763-45782 Msa1338370:intron 20.0%
!!! TATTTTGAAAAAAGCAATTC+TGG + tig0002041:46379-46398 None:intergenic 20.0%
!!! TTAACTTCCGTTTTTTTAAT+AGG - tig0002041:46820-46839 Msa1338370:intron 20.0%
!! TCTTTCACCTATTAAAAAAA+CGG + tig0002041:46830-46849 None:intergenic 20.0%
!!! ATACAATATGAATGTGATTT+TGG + tig0002041:46984-47003 None:intergenic 20.0%
!! TCATATTGTATACACATTAA+TGG - tig0002041:46993-47012 Msa1338370:CDS 20.0%
!! TTGTGAATTTAAGAAATAGT+AGG + tig0002041:47099-47118 None:intergenic 20.0%
!!! TTCTATTAGTCTTTTCTTAA+AGG - tig0002041:47438-47457 Msa1338370:CDS 20.0%
!! TTACAATGATTCAATAAATG+AGG - tig0002041:47480-47499 Msa1338370:intron 20.0%
!! ATTCTCTATAAAATCATCAT+TGG - tig0002041:47959-47978 Msa1338370:intron 20.0%
!! TTCTCTATAAAATCATCATT+GGG - tig0002041:47960-47979 Msa1338370:intron 20.0%
!!! AAGATTCTATCTTTTTTGAA+AGG + tig0002041:48022-48041 None:intergenic 20.0%
!! AAAAAAGATAGAATCTTCTT+CGG - tig0002041:48025-48044 Msa1338370:intron 20.0%
!! ATCCATTCTTATTAATTGAT+GGG + tig0002041:48527-48546 None:intergenic 20.0%
!!! ACTTAAATTTTTACAATGAC+AGG - tig0002041:48638-48657 Msa1338370:intron 20.0%
!! TCAAAAAAAAAATCATGCAA+AGG - tig0002041:48861-48880 Msa1338370:intron 20.0%
!!! ATAAATTAAGAGTGTCAATA+AGG + tig0002041:49208-49227 None:intergenic 20.0%
!! AAAAAGATCTAATATGCAAT+TGG - tig0002041:49666-49685 Msa1338370:intron 20.0%
!!! ATTTGTATCTTGTTTAAGAA+TGG + tig0002041:49715-49734 None:intergenic 20.0%
!! GATTTTCTGCTTGTAATTTT+GGG + tig0002041:43467-43486 None:intergenic 25.0%
!! AGATTTTCTGCTTGTAATTT+TGG + tig0002041:43468-43487 None:intergenic 25.0%
! ATATTTCCATGAACAAAATG+AGG + tig0002041:43546-43565 None:intergenic 25.0%
!! TTTTGTTCATGGAAATATTG+TGG - tig0002041:43548-43567 Msa1338370:intron 25.0%
!! CATGACTATCTTTGAATTTT+AGG - tig0002041:43685-43704 Msa1338370:intron 25.0%
!!! TTGGAGTTTAATTTTAGAAG+TGG + tig0002041:44043-44062 None:intergenic 25.0%
!! TCTTAAAATTCGGTCTATTT+TGG + tig0002041:44062-44081 None:intergenic 25.0%
! TTATCCTTGGAGAATTTAAA+AGG + tig0002041:44345-44364 None:intergenic 25.0%
! TATATGAGTAAGAACTAAAG+TGG + tig0002041:44443-44462 None:intergenic 25.0%
!!! AGACTGTTTGAGAATTTTTT+TGG - tig0002041:44533-44552 Msa1338370:intron 25.0%
! ACAACTTATGTCATATTTGT+AGG - tig0002041:44558-44577 Msa1338370:intron 25.0%
!!! TATTTGTAGGTTTTTTTGAG+AGG - tig0002041:44571-44590 Msa1338370:intron 25.0%
! ACATAAGCATTTATATGACA+AGG - tig0002041:44697-44716 Msa1338370:CDS 25.0%
! CATAAGCATTTATATGACAA+GGG - tig0002041:44698-44717 Msa1338370:CDS 25.0%
! ACAAACAAGAAAAAATGCAT+TGG + tig0002041:44925-44944 None:intergenic 25.0%
!!! ATGCATTTTTTCTTGTTTGT+AGG - tig0002041:44925-44944 Msa1338370:intron 25.0%
! CAAAACCCTGTTTATTATAA+AGG + tig0002041:45500-45519 None:intergenic 25.0%
!!! AGACAATGGACTAATTAATA+AGG - tig0002041:45581-45600 Msa1338370:intron 25.0%
! TGAAATATTTGATCAGATCA+TGG - tig0002041:45831-45850 Msa1338370:intron 25.0%
! AATAGAATACACAAATATGC+TGG - tig0002041:46395-46414 Msa1338370:intron 25.0%
! TTCTAAATGTGTTTCTCATT+TGG - tig0002041:46424-46443 Msa1338370:intron 25.0%
!!! GTTTTTTTAATAGGTGAAAG+AGG - tig0002041:46829-46848 Msa1338370:intron 25.0%
!! TCATTCTTTTAATGTTCACA+AGG + tig0002041:47024-47043 None:intergenic 25.0%
! AATCAAACAAAACCGTAAAT+TGG + tig0002041:47402-47421 None:intergenic 25.0%
! TGAATTAATAGACATAACAC+TGG - tig0002041:47516-47535 Msa1338370:intron 25.0%
! GAATTAATAGACATAACACT+GGG - tig0002041:47517-47536 Msa1338370:intron 25.0%
!!! TAGAGAGTTTTAGAAGAAAA+CGG - tig0002041:47566-47585 Msa1338370:intron 25.0%
!!! AATGATTTTCTAGTTTTGGA+GGG + tig0002041:47628-47647 None:intergenic 25.0%
!!! AAATGATTTTCTAGTTTTGG+AGG + tig0002041:47629-47648 None:intergenic 25.0%
!!! TACTCTACTTTTTTCTTTTC+TGG + tig0002041:47814-47833 None:intergenic 25.0%
! CTTTATTACATTATGTGTCA+AGG + tig0002041:47873-47892 None:intergenic 25.0%
! CTTAACATAATCCAACATTT+CGG - tig0002041:48116-48135 Msa1338370:CDS 25.0%
!!! ACAAGTTTTGACATTTTAGT+TGG + tig0002041:48265-48284 None:intergenic 25.0%
! TTCCCATCAATTAATAAGAA+TGG - tig0002041:48522-48541 Msa1338370:intron 25.0%
! CATCCATTCTTATTAATTGA+TGG + tig0002041:48528-48547 None:intergenic 25.0%
! AGGAATCCATATAAATCTAA+AGG - tig0002041:48782-48801 Msa1338370:intron 25.0%
! GTAACTTTATATTCATGCAA+AGG - tig0002041:48833-48852 Msa1338370:intron 25.0%
! GAAATGAGTTAATACAATCA+AGG + tig0002041:48920-48939 None:intergenic 25.0%
! ACACTCTTAATTTATCTGTT+AGG - tig0002041:49213-49232 Msa1338370:CDS 25.0%
!! AAAGTAGCACTAAAAGTATA+AGG - tig0002041:49342-49361 Msa1338370:intron 25.0%
! TTTGATGAAAAATCTTGAAG+TGG - tig0002041:49592-49611 Msa1338370:intron 25.0%
! TTGATGAAAAATCTTGAAGT+GGG - tig0002041:49593-49612 Msa1338370:intron 25.0%
!! ATACAACAAGAATGTGATTT+TGG + tig0002041:50137-50156 None:intergenic 25.0%
ACAAAATGGCATCATCTTTA+AGG - tig0002041:43325-43344 Msa1338370:CDS 30.0%
TTACAAAAGACAGACACATT+CGG + tig0002041:43356-43375 None:intergenic 30.0%
AGAATGAATGTGAAATGAAG+AGG + tig0002041:43386-43405 None:intergenic 30.0%
! AATGATCCTCATTTTGTTCA+TGG - tig0002041:43537-43556 Msa1338370:intron 30.0%
CGACATAACAAATTGTTCAA+TGG + tig0002041:44203-44222 None:intergenic 30.0%
CAGTTAACCATATAACAACA+GGG + tig0002041:44275-44294 None:intergenic 30.0%
TTGTTATATGGTTAACTGGA+GGG - tig0002041:44277-44296 Msa1338370:intron 30.0%
TCCATATTCATTCCAAACAA+GGG + tig0002041:44376-44395 None:intergenic 30.0%
ATCCATATTCATTCCAAACA+AGG + tig0002041:44377-44396 None:intergenic 30.0%
! TTGTTTGGAATGAATATGGA+TGG - tig0002041:44376-44395 Msa1338370:CDS 30.0%
! TGTTTGGAATGAATATGGAT+GGG - tig0002041:44377-44396 Msa1338370:CDS 30.0%
TCTTGCAATAATGACATGTT+TGG - tig0002041:44469-44488 Msa1338370:CDS 30.0%
TCTCTAAATTTCACAATGAC+AGG - tig0002041:45238-45257 Msa1338370:intron 30.0%
AATCATTCTTAGTGAACTGA+GGG + tig0002041:45280-45299 None:intergenic 30.0%
AAATCATTCTTAGTGAACTG+AGG + tig0002041:45281-45300 None:intergenic 30.0%
!! AATAAACAGGGTTTTGCTAT+TGG - tig0002041:45504-45523 Msa1338370:intron 30.0%
!!! TTTTAAGTTTGTTCCCTTCT+CGG - tig0002041:45672-45691 Msa1338370:intron 30.0%
AAGTAAATGGCACAACAAAT+TGG + tig0002041:45719-45738 None:intergenic 30.0%
!! TTTGATTTGTTAGGCACTAA+AGG - tig0002041:45772-45791 Msa1338370:intron 30.0%
TAATGTCATAGTACTGCATT+AGG + tig0002041:45969-45988 None:intergenic 30.0%
TTGGATGAAAAATCTAGAAG+TGG - tig0002041:46134-46153 Msa1338370:intron 30.0%
TGGATGAAAAATCTAGAAGT+GGG - tig0002041:46135-46154 Msa1338370:intron 30.0%
AAGAAGATCTCATATGCAAT+TGG - tig0002041:46208-46227 Msa1338370:intron 30.0%
!!! GGTAAGTTCGATTACTTTTT+TGG - tig0002041:46234-46253 Msa1338370:intron 30.0%
GAAGCACGTTAATTATAAGT+TGG - tig0002041:46341-46360 Msa1338370:intron 30.0%
GTCAGGTCAAAAAGAATTTA+AGG - tig0002041:46481-46500 Msa1338370:intron 30.0%
TTCACTATCAACCAAATATG+GGG + tig0002041:46519-46538 None:intergenic 30.0%
CTTCACTATCAACCAAATAT+GGG + tig0002041:46520-46539 None:intergenic 30.0%
TCTTCACTATCAACCAAATA+TGG + tig0002041:46521-46540 None:intergenic 30.0%
! CTTCAAACTAAAAGTGTGTT+TGG - tig0002041:46644-46663 Msa1338370:intron 30.0%
TGATGTTTACATGTCACTAT+CGG - tig0002041:46741-46760 Msa1338370:intron 30.0%
CACTTCAGATGTTAAAAGAT+TGG - tig0002041:46888-46907 Msa1338370:CDS 30.0%
ATGTTAAAAGATTGGATGCA+AGG - tig0002041:46896-46915 Msa1338370:CDS 30.0%
TGTTAAAAGATTGGATGCAA+GGG - tig0002041:46897-46916 Msa1338370:CDS 30.0%
TGTAGAGTTATAAACGTGAT+AGG - tig0002041:47161-47180 Msa1338370:intron 30.0%
AGAATTAGAGCTTGGAAAAA+GGG + tig0002041:47338-47357 None:intergenic 30.0%
ACTAAAACAGAATTAGAGCT+TGG + tig0002041:47346-47365 None:intergenic 30.0%
TAGGTTCACTAACCAATTTA+CGG - tig0002041:47387-47406 Msa1338370:CDS 30.0%
AAAACTCTCTATAGCTCATT+TGG + tig0002041:47557-47576 None:intergenic 30.0%
!!! TCTACTTTTTTCTTTTCTGG+TGG + tig0002041:47811-47830 None:intergenic 30.0%
!! ATATTTTTGAACCATCCTGT+TGG - tig0002041:47833-47852 Msa1338370:CDS 30.0%
TATATTATCGCAGACATTTG+AGG + tig0002041:47928-47947 None:intergenic 30.0%
!! GATGACTTATTATTTTGTCG+AGG + tig0002041:48000-48019 None:intergenic 30.0%
AATCATTCTTTGTGAACTGA+GGG + tig0002041:48680-48699 None:intergenic 30.0%
AAATCATTCTTTGTGAACTG+AGG + tig0002041:48681-48700 None:intergenic 30.0%
ACAGATTATGCATTAGACAA+TGG - tig0002041:49012-49031 Msa1338370:intron 30.0%
!! AGACAATGGACTGATTAATA+AGG - tig0002041:49026-49045 Msa1338370:intron 30.0%
AGATTGGTAAAATTCTCTCT+TGG + tig0002041:49160-49179 None:intergenic 30.0%
GACATTAGAAAGAAATGTGA+GGG - tig0002041:49434-49453 Msa1338370:intron 30.0%
TCAACCAAAAATGAAGTTGT+AGG + tig0002041:49838-49857 None:intergenic 30.0%
TTCCTTAAGGTTTGTGTTTA+AGG - tig0002041:49901-49920 Msa1338370:CDS 30.0%
ATCCTTAAACACAAACCTTA+AGG + tig0002041:49906-49925 None:intergenic 30.0%
! CTTCAAATTAAAAGTGTGTC+TGG - tig0002041:49970-49989 Msa1338370:CDS 30.0%
!! AACATTTGAAGTGCAACTTT+TGG + tig0002041:50075-50094 None:intergenic 30.0%
CACTTCAAATGTTACAAGAT+TGG - tig0002041:50082-50101 Msa1338370:CDS 30.0%
AGGAGAATGTCATTGTTTGT+GGG + tig0002041:43423-43442 None:intergenic 35.0%
CAAGCAGAAAATCTCATAAG+AGG - tig0002041:43474-43493 Msa1338370:intron 35.0%
! GGTGTGTTTATGGAATCTTT+TGG + tig0002041:43513-43532 None:intergenic 35.0%
ATCATTCTCTGGTGTGTTTA+TGG + tig0002041:43523-43542 None:intergenic 35.0%
ACAAAATGAGGATCATTCTC+TGG + tig0002041:43534-43553 None:intergenic 35.0%
! TCTATTTTACCTTGCAGCTT+CGG + tig0002041:43664-43683 None:intergenic 35.0%
!! CAATTTGTTATGTCGATTGC+AGG - tig0002041:44208-44227 Msa1338370:CDS 35.0%
CTTTGAATCTCGAAACACTA+AGG - tig0002041:44245-44264 Msa1338370:intron 35.0%
CCAGTTAACCATATAACAAC+AGG + tig0002041:44276-44295 None:intergenic 35.0%
CCTGTTGTTATATGGTTAAC+TGG - tig0002041:44273-44292 Msa1338370:intron 35.0%
GTTGTTATATGGTTAACTGG+AGG - tig0002041:44276-44295 Msa1338370:intron 35.0%
! TGGTCCTTTTAAATTCTCCA+AGG - tig0002041:44338-44357 Msa1338370:intron 35.0%
ATAAGAACTTGTCCCTTGTT+TGG - tig0002041:44361-44380 Msa1338370:intron 35.0%
! TCCCTTGTTTGGAATGAATA+TGG - tig0002041:44372-44391 Msa1338370:CDS 35.0%
TGATTGAACATAGCACAACA+GGG + tig0002041:44786-44805 None:intergenic 35.0%
TTGATTGAACATAGCACAAC+AGG + tig0002041:44787-44806 None:intergenic 35.0%
! CTTGATTGTTTGAGTTTGTG+TGG + tig0002041:44863-44882 None:intergenic 35.0%
! ACAATGACAGGCATTTTTCA+AGG - tig0002041:45250-45269 Msa1338370:intron 35.0%
!! TGGTAATGGATTAACCAATC+CGG - tig0002041:45524-45543 Msa1338370:intron 35.0%
TATGCCTTGTACTGAATTTC+CGG + tig0002041:45546-45565 None:intergenic 35.0%
CCATTGTCTAATGCAAAATC+TGG + tig0002041:45570-45589 None:intergenic 35.0%
! CCAGATTTTGCATTAGACAA+TGG - tig0002041:45567-45586 Msa1338370:intron 35.0%
! CACAAGATTCTATAGCCTTT+TGG + tig0002041:45644-45663 None:intergenic 35.0%
CAAAAGGCTATAGAATCTTG+TGG - tig0002041:45642-45661 Msa1338370:intron 35.0%
TTTCAGTTTATGACCGAGAA+GGG + tig0002041:45688-45707 None:intergenic 35.0%
! TTTTCAGTTTATGACCGAGA+AGG + tig0002041:45689-45708 None:intergenic 35.0%
TGACATTAGAAAGCAATGTG+TGG - tig0002041:45981-46000 Msa1338370:intron 35.0%
GACATTAGAAAGCAATGTGT+GGG - tig0002041:45982-46001 Msa1338370:intron 35.0%
TCTTGAACATGAAGACAGTA+AGG - tig0002041:46040-46059 Msa1338370:intron 35.0%
CTTGAACATGAAGACAGTAA+GGG - tig0002041:46041-46060 Msa1338370:intron 35.0%
AAATGTGTTTCTCATTTGGC+AGG - tig0002041:46428-46447 Msa1338370:intron 35.0%
AATGTGTTTCTCATTTGGCA+GGG - tig0002041:46429-46448 Msa1338370:intron 35.0%
TTCCTCAAGGTTTGTGTTTA+AGG - tig0002041:46575-46594 Msa1338370:CDS 35.0%
TCCTCAAGGTTTGTGTTTAA+GGG - tig0002041:46576-46595 Msa1338370:CDS 35.0%
! TTTTAATAGGTGAAAGAGGC+TGG - tig0002041:46833-46852 Msa1338370:intron 35.0%
!!! ACTTCGTTTTTTTTCGACTC+AGG + tig0002041:47288-47307 None:intergenic 35.0%
CAGAATTAGAGCTTGGAAAA+AGG + tig0002041:47339-47358 None:intergenic 35.0%
GGTTAGTGAACCTAAATCTA+AGG + tig0002041:47381-47400 None:intergenic 35.0%
ATAGACATAACACTGGGAAA+AGG - tig0002041:47523-47542 Msa1338370:intron 35.0%
TAGACATAACACTGGGAAAA+GGG - tig0002041:47524-47543 Msa1338370:intron 35.0%
!! TTTGCATACGTTGATTTGCT+TGG + tig0002041:47659-47678 None:intergenic 35.0%
GACAGTGCATAATATATGCA+AGG - tig0002041:47767-47786 Msa1338370:intron 35.0%
TTTCCCAACAAAATCCTCTT+CGG - tig0002041:47897-47916 Msa1338370:CDS 35.0%
AAAGATAGAATCTTCTTCGG+CGG - tig0002041:48028-48047 Msa1338370:intron 35.0%
! AACGTTCGATTTTGCTGAAT+CGG + tig0002041:48059-48078 None:intergenic 35.0%
ATAAATAACTGCCAAGATCG+AGG - tig0002041:48318-48337 Msa1338370:intron 35.0%
TCTATCATAAGAGGATTGAG+AGG + tig0002041:48414-48433 None:intergenic 35.0%
ACACTTGTCTCTATCATAAG+AGG + tig0002041:48423-48442 None:intergenic 35.0%
TAGATAGTATGTAACGTCGT+GGG + tig0002041:48562-48581 None:intergenic 35.0%
ATAGATAGTATGTAACGTCG+TGG + tig0002041:48563-48582 None:intergenic 35.0%
! ACAATGACAGGCATTTTTCA+AGG - tig0002041:45250-45269 Msa1338370:intron 35.0%
!!! CTTCTTTTGCTTTGTTTCCT+TGG + tig0002041:48764-48783 None:intergenic 35.0%
CAAGGAAACAAAGCAAAAGA+AGG - tig0002041:48762-48781 Msa1338370:intron 35.0%
! AATAAACAGGGCTTTGCTAT+TGG - tig0002041:48949-48968 Msa1338370:intron 35.0%
CATGTACTGAATTTCAGGAT+TGG + tig0002041:48986-49005 None:intergenic 35.0%
CAATCCTGAAATTCAGTACA+TGG - tig0002041:48984-49003 Msa1338370:intron 35.0%
TATGCCATGTACTGAATTTC+AGG + tig0002041:48991-49010 None:intergenic 35.0%
! ACATGACTTGCACAATAGAT+TGG + tig0002041:49176-49195 None:intergenic 35.0%
!! ATTTATCTGTTAGGCACTGA+AGG - tig0002041:49222-49241 Msa1338370:CDS 35.0%
CACATTTCTTTCTAATGTCG+TGG + tig0002041:49433-49452 None:intergenic 35.0%
CGACATTAGAAAGAAATGTG+AGG - tig0002041:49433-49452 Msa1338370:intron 35.0%
CTTGAACATGAAGACAGTAA+AGG - tig0002041:46041-46060 Msa1338370:intron 35.0%
AAGACAGTAAAGGAAGCTTT+AGG - tig0002041:49509-49528 Msa1338370:intron 35.0%
!! TAAAGGAAGCTTTAGGTGTT+GGG - tig0002041:49516-49535 Msa1338370:intron 35.0%
TTTCATCAAATCATCCGACA+TGG + tig0002041:49582-49601 None:intergenic 35.0%
GATCTAATATGCAATTGGCT+TGG - tig0002041:49671-49690 Msa1338370:intron 35.0%
CTCTAAATGTGCTTCTCATT+TGG - tig0002041:49750-49769 Msa1338370:intron 35.0%
AAATGTGCTTCTCATTTGGT+AGG - tig0002041:49754-49773 Msa1338370:intron 35.0%
AATGTGCTTCTCATTTGGTA+GGG - tig0002041:49755-49774 Msa1338370:intron 35.0%
! GTCTCCTACAACTTCATTTT+TGG - tig0002041:49831-49850 Msa1338370:CDS 35.0%
! GCAGGAATTCTGAAAAATCA+TGG - tig0002041:49868-49887 Msa1338370:CDS 35.0%
TCTGAAAAATCATGGACCTT+TGG - tig0002041:49876-49895 Msa1338370:CDS 35.0%
! TTTGGAACAATAGGTGAAAG+AGG - tig0002041:50023-50042 Msa1338370:CDS 35.0%
ATGTTACAAGATTGGATGCA+AGG - tig0002041:50090-50109 Msa1338370:CDS 35.0%
TGTTACAAGATTGGATGCAA+GGG - tig0002041:50091-50110 Msa1338370:CDS 35.0%
TCATTGTTTGTGGGATAAGC+TGG + tig0002041:43414-43433 None:intergenic 40.0%
GAGGAGAATGTCATTGTTTG+TGG + tig0002041:43424-43443 None:intergenic 40.0%
AAGATGATGCAGTTGAAGAG+AGG + tig0002041:43443-43462 None:intergenic 40.0%
GAAAAGAAGTTCACTTTCCC+TGG - tig0002041:43570-43589 Msa1338370:CDS 40.0%
AGGATGACCCTGTTGTTATA+TGG - tig0002041:44265-44284 Msa1338370:intron 40.0%
AAGGGACAAGTTCTTATCCT+TGG + tig0002041:44358-44377 None:intergenic 40.0%
GAATGAATATGGATGGGACA+TGG - tig0002041:44383-44402 Msa1338370:CDS 40.0%
AGCACAACAGGGAAAATCTA+GGG + tig0002041:44775-44794 None:intergenic 40.0%
TAGCACAACAGGGAAAATCT+AGG + tig0002041:44776-44795 None:intergenic 40.0%
! TTGTTTGAGTTTGTGTGGAC+TGG + tig0002041:44858-44877 None:intergenic 40.0%
ATATTTGTAGACCAACCCAC+TGG - tig0002041:44959-44978 Msa1338370:intron 40.0%
CGATCTATATGACTTCTTGC+AGG - tig0002041:45045-45064 Msa1338370:intron 40.0%
! ACATTCCAGCTTTTGCATCT+AGG - tig0002041:45333-45352 Msa1338370:intron 40.0%
! CATTCCAGCTTTTGCATCTA+GGG - tig0002041:45334-45353 Msa1338370:intron 40.0%
! TTTGCATCTAGGGTTCATCA+AGG - tig0002041:45344-45363 Msa1338370:intron 40.0%
TAGGGTTCATCAAGGAAACA+AGG - tig0002041:45352-45371 Msa1338370:intron 40.0%
CAAGGAAACAAGGCAAAAGA+AGG - tig0002041:45362-45381 Msa1338370:intron 40.0%
!!! CAGGGTTTTGCTATTGGTAA+TGG - tig0002041:45510-45529 Msa1338370:intron 40.0%
CTTGTACTGAATTTCCGGAT+TGG + tig0002041:45541-45560 None:intergenic 40.0%
CAATCCGGAAATTCAGTACA+AGG - tig0002041:45539-45558 Msa1338370:intron 40.0%
!! TGGGAACAACTTGTTGATGT+TGG + tig0002041:45616-45635 None:intergenic 40.0%
!! GATTTGTTAGGCACTAAAGG+TGG - tig0002041:45775-45794 Msa1338370:intron 40.0%
TTGTTACGACTTCTCCAATG+CGG - tig0002041:46011-46030 Msa1338370:intron 40.0%
GTTCAAGAATGTTTCCGCAT+TGG + tig0002041:46028-46047 None:intergenic 40.0%
AAGACAGTAAGGGAAGCTTT+AGG - tig0002041:46051-46070 Msa1338370:intron 40.0%
!! TAAGGGAAGCTTTAGGTGTT+GGG - tig0002041:46058-46077 Msa1338370:intron 40.0%
TTTCATCCAATCCTGCAACA+TGG + tig0002041:46124-46143 None:intergenic 40.0%
TCTTCTTGAGGATGGAATCA+AGG - tig0002041:46167-46186 Msa1338370:intron 40.0%
GATCTCATATGCAATTGGCT+TGG - tig0002041:46213-46232 Msa1338370:intron 40.0%
!!! CTTTTTTGGTGTTAGTCCAC+CGG - tig0002041:46248-46267 Msa1338370:intron 40.0%
TCAACCAAATATGGGGTTGT+AGG + tig0002041:46512-46531 None:intergenic 40.0%
!! TTGGTTGATAGTGAAGAAGC+AGG - tig0002041:46524-46543 Msa1338370:CDS 40.0%
ACCCTTAAACACAAACCTTG+AGG + tig0002041:46580-46599 None:intergenic 40.0%
!! AACATCTGAAGTGCAGCTTT+TGG + tig0002041:46881-46900 None:intergenic 40.0%
AAGGGAAACTGATAAGGACA+AGG - tig0002041:46915-46934 Msa1338370:CDS 40.0%
AGGGAAACTGATAAGGACAA+GGG - tig0002041:46916-46935 Msa1338370:CDS 40.0%
CCAAAAATGTGAGTGACTTG+GGG + tig0002041:47066-47085 None:intergenic 40.0%
GCCAAAAATGTGAGTGACTT+GGG + tig0002041:47067-47086 None:intergenic 40.0%
TGCCAAAAATGTGAGTGACT+TGG + tig0002041:47068-47087 None:intergenic 40.0%
AATCAACCGAGATACACTCT+TGG - tig0002041:47241-47260 Msa1338370:CDS 40.0%
! TCATTGCCAAGAGTGTATCT+CGG + tig0002041:47250-47269 None:intergenic 40.0%
! TTTTCGACTCAGGAGTTCAA+CGG + tig0002041:47278-47297 None:intergenic 40.0%
TTAGAGCTTGGAAAAAGGGA+AGG + tig0002041:47334-47353 None:intergenic 40.0%
AGACATAACACTGGGAAAAG+GGG - tig0002041:47525-47544 Msa1338370:intron 40.0%
GTGCATAATATATGCAAGGC+CGG - tig0002041:47771-47790 Msa1338370:intron 40.0%
!!! TTTTTTCTTTTCTGGTGGCC+GGG + tig0002041:47806-47825 None:intergenic 40.0%
!!! CTTTTTTCTTTTCTGGTGGC+CGG + tig0002041:47807-47826 None:intergenic 40.0%
! TTTTTGAACCATCCTGTTGG+AGG - tig0002041:47836-47855 Msa1338370:CDS 40.0%
TTCCCAACAAAATCCTCTTC+GGG - tig0002041:47898-47917 Msa1338370:CDS 40.0%
! ATCCCGAAGAGGATTTTGTT+GGG + tig0002041:47903-47922 None:intergenic 40.0%
! TATCCCGAAGAGGATTTTGT+TGG + tig0002041:47904-47923 None:intergenic 40.0%
!! TGACGTTTTAGCCGAAATGT+TGG + tig0002041:48130-48149 None:intergenic 40.0%
! ACTAGTTGTTGCTTGCTTGA+AGG + tig0002041:48298-48317 None:intergenic 40.0%
! ACATTCCAGCTTTTGCATCT+AGG - tig0002041:45333-45352 Msa1338370:intron 40.0%
! CATTCCAGCTTTTGCATCTA+GGG - tig0002041:45334-45353 Msa1338370:intron 40.0%
ACAGCATACATTAGTGTTGC+TGG + tig0002041:49313-49332 None:intergenic 40.0%
AAGAAATGTGAGGGAGCTTT+CGG - tig0002041:49443-49462 Msa1338370:intron 40.0%
TTGTCATGACTTCTCTGACA+TGG - tig0002041:49469-49488 Msa1338370:intron 40.0%
!! GTAAAGGAAGCTTTAGGTGT+TGG - tig0002041:49515-49534 Msa1338370:intron 40.0%
!! AAAGGAAGCTTTAGGTGTTG+GGG - tig0002041:49517-49536 Msa1338370:intron 40.0%
CTTAGTATACCTTGCCATGT+CGG - tig0002041:49565-49584 Msa1338370:intron 40.0%
CTCATTTGGTAGGGAATTCA+AGG - tig0002041:49764-49783 Msa1338370:intron 40.0%
ATTTGGTAGGGAATTCAAGG+TGG - tig0002041:49767-49786 Msa1338370:intron 40.0%
TTTGGTAGGGAATTCAAGGT+GGG - tig0002041:49768-49787 Msa1338370:intron 40.0%
GTCAGGTCAGACAACATTTA+AGG - tig0002041:49807-49826 Msa1338370:CDS 40.0%
!! TTGGTTGATAGTGAAGAAGC+AGG - tig0002041:46524-46543 Msa1338370:CDS 40.0%
CAAACCTTAAGGAAAGCCAA+AGG + tig0002041:49895-49914 None:intergenic 40.0%
!! GCAACTTTTGGTTGATCCAT+AGG + tig0002041:50063-50082 None:intergenic 40.0%
CAAAAGACAGACACATTCGG+AGG + tig0002041:43353-43372 None:intergenic 45.0%
!!! TTCCCTGGTTTTGTTGACTC+TGG - tig0002041:43585-43604 Msa1338370:CDS 45.0%
CACCAGAGTCAACAAAACCA+GGG + tig0002041:43590-43609 None:intergenic 45.0%
GGTGCTTCTGTTGAAGAACT+TGG - tig0002041:43606-43625 Msa1338370:CDS 45.0%
GAAGAACTTGGTCATCATGC+AGG - tig0002041:43618-43637 Msa1338370:CDS 45.0%
TAGGGGGTTTAGGCCATATT+TGG + tig0002041:44757-44776 None:intergenic 45.0%
AGGGAAAATCTAGGGGGTTT+AGG + tig0002041:44767-44786 None:intergenic 45.0%
CACAACAGGGAAAATCTAGG+GGG + tig0002041:44773-44792 None:intergenic 45.0%
GCACAACAGGGAAAATCTAG+GGG + tig0002041:44774-44793 None:intergenic 45.0%
TAGCTGAAACCTGTTCCAGT+GGG + tig0002041:44977-44996 None:intergenic 45.0%
ATAGCTGAAACCTGTTCCAG+TGG + tig0002041:44978-44997 None:intergenic 45.0%
GACGTTCGACATGATGAAGA+CGG - tig0002041:45013-45032 Msa1338370:intron 45.0%
ATTACCGGAGAATCATACGC+TGG - tig0002041:45305-45324 Msa1338370:intron 45.0%
ATGTCCAGCGTATGATTCTC+CGG + tig0002041:45312-45331 None:intergenic 45.0%
TGAACCCTAGATGCAAAAGC+TGG + tig0002041:45341-45360 None:intergenic 45.0%
! CTATAGCCTTTTGGCATCGT+GGG + tig0002041:45635-45654 None:intergenic 45.0%
! TCTATAGCCTTTTGGCATCG+TGG + tig0002041:45636-45655 None:intergenic 45.0%
GATCAGATCATGGACATAGC+TGG - tig0002041:45841-45860 Msa1338370:intron 45.0%
!! GTAAGGGAAGCTTTAGGTGT+TGG - tig0002041:46057-46076 Msa1338370:intron 45.0%
!! AAGGGAAGCTTTAGGTGTTG+GGG - tig0002041:46059-46078 Msa1338370:intron 45.0%
AGTATACAGTGCCATGTTGC+AGG - tig0002041:46110-46129 Msa1338370:intron 45.0%
ATTCCTGCTCTTCTTGAGGA+TGG - tig0002041:46159-46178 Msa1338370:intron 45.0%
ATTCCATCCTCAAGAAGAGC+AGG + tig0002041:46165-46184 None:intergenic 45.0%
! ATCAAGGTGCTTGTGTATGC+TGG - tig0002041:46183-46202 Msa1338370:intron 45.0%
CTCATTTGGCAGGGAATTCA+AGG - tig0002041:46438-46457 Msa1338370:intron 45.0%
ATTTGGCAGGGAATTCAAGG+TGG - tig0002041:46441-46460 Msa1338370:intron 45.0%
TTTGGCAGGGAATTCAAGGT+GGG - tig0002041:46442-46461 Msa1338370:intron 45.0%
! TTTTTGACCTGACCACGTCA+TGG + tig0002041:46474-46493 None:intergenic 45.0%
GTCTCCTACAACCCCATATT+TGG - tig0002041:46505-46524 Msa1338370:intron 45.0%
CAAACCTTGAGGAAAGCAAG+AGG + tig0002041:46569-46588 None:intergenic 45.0%
!! TCACTATCGGTGTTGTGTCT+GGG - tig0002041:46754-46773 Msa1338370:intron 45.0%
!! GCAGCTTTTGGTTGATCCAT+AGG + tig0002041:46869-46888 None:intergenic 45.0%
GGATGCAAGGGAAACTGATA+AGG - tig0002041:46909-46928 Msa1338370:CDS 45.0%
GGGAAACTGATAAGGACAAG+GGG - tig0002041:46917-46936 Msa1338370:CDS 45.0%
AAACTGATAAGGACAAGGGG+AGG - tig0002041:46920-46939 Msa1338370:CDS 45.0%
! CCCCAAGTCACTCACATTTT+TGG - tig0002041:47063-47082 Msa1338370:intron 45.0%
! GAAGAGCGTGGTCTATGAAT+TGG + tig0002041:47124-47143 None:intergenic 45.0%
TTCATAGACCACGCTCTTCA+TGG - tig0002041:47125-47144 Msa1338370:intron 45.0%
AGAGAAAACCATGAAGAGCG+TGG + tig0002041:47136-47155 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - tig0002041:47745-47764 Msa1338370:intron 45.0%
! CATTTGAGGTTATCCCGAAG+AGG + tig0002041:47914-47933 None:intergenic 45.0%
ATTGCCCCCAAGTCAACAAT+CGG + tig0002041:48200-48219 None:intergenic 45.0%
GGGGGCAATTCTTCTAGATT+AGG - tig0002041:48211-48230 Msa1338370:intron 45.0%
AGAGGATTGAGAGGTAAGCT+GGG + tig0002041:48405-48424 None:intergenic 45.0%
AAGAGGATTGAGAGGTAAGC+TGG + tig0002041:48406-48425 None:intergenic 45.0%
GTATGTAACGTCGTGGGATA+GGG + tig0002041:48556-48575 None:intergenic 45.0%
AGTATGTAACGTCGTGGGAT+AGG + tig0002041:48557-48576 None:intergenic 45.0%
TGAACCCTAGATGCAAAAGC+TGG + tig0002041:45341-45360 None:intergenic 45.0%
! TTTGCATCTAGGGTTCACCA+AGG - tig0002041:48744-48763 Msa1338370:intron 45.0%
!! CAGGGCTTTGCTATTGGTAA+TGG - tig0002041:48955-48974 Msa1338370:intron 45.0%
GTTGATCCCACCATGTCAAA+AGG - tig0002041:49071-49090 Msa1338370:CDS 45.0%
! TTTTCTGCCGCCTTTTGACA+TGG + tig0002041:49084-49103 None:intergenic 45.0%
CAAAAGGCGGCAGAAAAATG+TGG - tig0002041:49087-49106 Msa1338370:CDS 45.0%
!! TATCTGTTAGGCACTGAAGG+TGG - tig0002041:49225-49244 Msa1338370:intron 45.0%
TTCTAATGTCGTGGTACTGC+AGG + tig0002041:49424-49443 None:intergenic 45.0%
TCAAATCATCCGACATGGCA+AGG + tig0002041:49577-49596 None:intergenic 45.0%
ATTCCTGCTCTTCTTGAGGA+TGG - tig0002041:46159-46178 Msa1338370:intron 45.0%
ATTCCATCCTCAAGAAGAGC+AGG + tig0002041:46165-46184 None:intergenic 45.0%
!! TGGACCTTTGGCTTTCCTTA+AGG - tig0002041:49888-49907 Msa1338370:CDS 45.0%
GAACAATAGGTGAAAGAGGC+TGG - tig0002041:50027-50046 Msa1338370:CDS 45.0%
!!! ATTTAACTATATATATTTTT+TGG - tig0002041:50005-50024 Msa1338370:CDS 5.0%
GCACCAGAGTCAACAAAACC+AGG + tig0002041:43591-43610 None:intergenic 50.0%
TTCCTCATTCCGAAGCTGCA+AGG - tig0002041:43652-43671 Msa1338370:CDS 50.0%
TACCTTGCAGCTTCGGAATG+AGG + tig0002041:43657-43676 None:intergenic 50.0%
ATATGGTTAACTGGAGGGCC+AGG - tig0002041:44282-44301 Msa1338370:intron 50.0%
GCAATTTCACTGCTGCATCC+TGG + tig0002041:44303-44322 None:intergenic 50.0%
TGAAACCTGTTCCAGTGGGT+TGG + tig0002041:44973-44992 None:intergenic 50.0%
TCGAACGTCGCTATCATCAG+TGG + tig0002041:45002-45021 None:intergenic 50.0%
GTTGTTCCCACGATGCCAAA+AGG - tig0002041:45626-45645 Msa1338370:intron 50.0%
!! AGCTTTAGGTGTTGGGGACT+TGG - tig0002041:46065-46084 Msa1338370:intron 50.0%
ACAGTGCCATGTTGCAGGAT+TGG - tig0002041:46115-46134 Msa1338370:intron 50.0%
GGGTATTCCTGCTCTTCTTG+AGG - tig0002041:46155-46174 Msa1338370:intron 50.0%
TAGCCAGTTCCCCTTCTTCT+GGG + tig0002041:46276-46295 None:intergenic 50.0%
TTAGCCAGTTCCCCTTCTTC+TGG + tig0002041:46277-46296 None:intergenic 50.0%
GCAGGAGATCTGAAAAGCCA+CGG - tig0002041:46542-46561 Msa1338370:CDS 50.0%
!! GTCACTATCGGTGTTGTGTC+TGG - tig0002041:46753-46772 Msa1338370:intron 50.0%
! TGTCTGGGACAAGTGTCTGT+CGG - tig0002041:46769-46788 Msa1338370:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - tig0002041:47744-47763 Msa1338370:intron 50.0%
ATAGTCGTCCTCCAACAGGA+TGG + tig0002041:47847-47866 None:intergenic 50.0%
GAGAATAGTCGTCCTCCAAC+AGG + tig0002041:47851-47870 None:intergenic 50.0%
AAGTCAACAATCGGTGGGGA+TGG + tig0002041:48191-48210 None:intergenic 50.0%
! ATCCCCACCGATTGTTGACT+TGG - tig0002041:48190-48209 Msa1338370:CDS 50.0%
!! TCCCCACCGATTGTTGACTT+GGG - tig0002041:48191-48210 Msa1338370:CDS 50.0%
ATAACTGCCAAGATCGAGGC+AGG - tig0002041:48322-48341 Msa1338370:intron 50.0%
TAACTGCCAAGATCGAGGCA+GGG - tig0002041:48323-48342 Msa1338370:intron 50.0%
! GAGGTAAGCTGGGACGTTTT+TGG + tig0002041:48395-48414 None:intergenic 50.0%
ATTACCGGAGAGTCATACGC+TGG - tig0002041:48705-48724 Msa1338370:intron 50.0%
ATGTCCAGCGTATGACTCTC+CGG + tig0002041:48712-48731 None:intergenic 50.0%
GATCCCACCATGTCAAAAGG+CGG - tig0002041:49074-49093 Msa1338370:CDS 50.0%
ACTGAAGGTGGACAAGCATG+CGG - tig0002041:49237-49256 Msa1338370:intron 50.0%
GGGTATTCCTGCTCTTCTTG+AGG - tig0002041:46155-46174 Msa1338370:intron 50.0%
GTTGATGCCATGAAGTGGTC+AGG - tig0002041:49790-49809 Msa1338370:intron 50.0%
TGTCTGACCTGACCACTTCA+TGG + tig0002041:49800-49819 None:intergenic 50.0%
GTAGACCAACCCACTGGAAC+AGG - tig0002041:44965-44984 Msa1338370:intron 55.0%
!! TCCACCGGTTCCCAGAAGAA+GGG - tig0002041:46263-46282 Msa1338370:intron 55.0%
! GTTCCCCTTCTTCTGGGAAC+CGG + tig0002041:46270-46289 None:intergenic 55.0%
GTTCCCAGAAGAAGGGGAAC+TGG - tig0002041:46270-46289 Msa1338370:intron 55.0%
GTTGATGCCATGACGTGGTC+AGG - tig0002041:46464-46483 Msa1338370:intron 55.0%
TGAGGAAAGCAAGAGGTCCG+TGG + tig0002041:46562-46581 None:intergenic 55.0%
CGGACCTCTTGCTTTCCTCA+AGG - tig0002041:46562-46581 Msa1338370:CDS 55.0%
! GGTGAAAGAGGCTGGTCACA+TGG - tig0002041:46841-46860 Msa1338370:intron 55.0%
! GGCTGGTCACATGGTTCCTA+TGG - tig0002041:46850-46869 Msa1338370:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG + tig0002041:47743-47762 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - tig0002041:47740-47759 Msa1338370:intron 55.0%
CAAGGCCGGAGTTCAAATCC+CGG - tig0002041:47785-47804 Msa1338370:intron 55.0%
AACAATCGGTGGGGATGGCA+TGG + tig0002041:48186-48205 None:intergenic 55.0%
CCCCAAGTCAACAATCGGTG+GGG + tig0002041:48195-48214 None:intergenic 55.0%
!! CCCCACCGATTGTTGACTTG+GGG - tig0002041:48192-48211 Msa1338370:CDS 55.0%
CCCCCAAGTCAACAATCGGT+GGG + tig0002041:48196-48215 None:intergenic 55.0%
!! CCCACCGATTGTTGACTTGG+GGG - tig0002041:48193-48212 Msa1338370:intron 55.0%
CTTTGTCCCTGCCTCGATCT+TGG + tig0002041:48332-48351 None:intergenic 55.0%
CAAGATCGAGGCAGGGACAA+AGG - tig0002041:48330-48349 Msa1338370:intron 55.0%
! CTGCCGCCTTTTGACATGGT+GGG + tig0002041:49080-49099 None:intergenic 55.0%
! TCTGCCGCCTTTTGACATGG+TGG + tig0002041:49081-49100 None:intergenic 55.0%
CTGAAGGTGGACAAGCATGC+GGG - tig0002041:49238-49257 Msa1338370:intron 55.0%
!! GGTGGGTTGATGCCATGAAG+TGG - tig0002041:49785-49804 Msa1338370:intron 55.0%
! GGTGAAAGAGGCTGGTCACA+TGG - tig0002041:46841-46860 Msa1338370:intron 55.0%
! GGCTGGTCACATGGTTCCTA+TGG - tig0002041:46850-46869 Msa1338370:intron 55.0%
!! GTCCACCGGTTCCCAGAAGA+AGG - tig0002041:46262-46281 Msa1338370:intron 60.0%
!! CCACCGGTTCCCAGAAGAAG+GGG - tig0002041:46264-46283 Msa1338370:intron 60.0%
!! GGTGGGTTGATGCCATGACG+TGG - tig0002041:46459-46478 Msa1338370:intron 60.0%
GGTGGCCGGGATTTGAACTC+CGG + tig0002041:47793-47812 None:intergenic 60.0%
GCCCCCAAGTCAACAATCGG+TGG + tig0002041:48197-48216 None:intergenic 60.0%
GAGGCAGGGACAAAGGCAGA+GGG - tig0002041:48337-48356 Msa1338370:intron 60.0%
! CCCCTTCTTCTGGGAACCGG+TGG + tig0002041:46267-46286 None:intergenic 65.0%
CGAGGCAGGGACAAAGGCAG+AGG - tig0002041:48336-48355 Msa1338370:intron 65.0%
Chromosome Type Strat End Strand Name
tig0002041 gene 43313 50158 43313 ID=Msa1338370;Name=Msa1338370
tig0002041 mRNA 43313 50158 43313 ID=Msa1338370-mRNA-1;Parent=Msa1338370;Name=Msa1338370-mRNA-1;_AED=0.18;_eAED=0.18;_QI=17|0.71|0.6|1|1|1|15|0|809
tig0002041 exon 43313 43435 43313 ID=Msa1338370-mRNA-1:exon:1601;Parent=Msa1338370-mRNA-1
tig0002041 exon 43562 43695 43562 ID=Msa1338370-mRNA-1:exon:1600;Parent=Msa1338370-mRNA-1
tig0002041 exon 43779 44043 43779 ID=Msa1338370-mRNA-1:exon:1599;Parent=Msa1338370-mRNA-1
tig0002041 exon 44148 44236 44148 ID=Msa1338370-mRNA-1:exon:1598;Parent=Msa1338370-mRNA-1
tig0002041 exon 44363 44513 44363 ID=Msa1338370-mRNA-1:exon:1597;Parent=Msa1338370-mRNA-1
tig0002041 exon 44668 44811 44668 ID=Msa1338370-mRNA-1:exon:1596;Parent=Msa1338370-mRNA-1
tig0002041 exon 46522 46629 46522 ID=Msa1338370-mRNA-1:exon:1595;Parent=Msa1338370-mRNA-1
tig0002041 exon 46888 47021 46888 ID=Msa1338370-mRNA-1:exon:1594;Parent=Msa1338370-mRNA-1
tig0002041 exon 47237 47495 47237 ID=Msa1338370-mRNA-1:exon:1593;Parent=Msa1338370-mRNA-1
tig0002041 exon 47598 47686 47598 ID=Msa1338370-mRNA-1:exon:1592;Parent=Msa1338370-mRNA-1
tig0002041 exon 47808 47958 47808 ID=Msa1338370-mRNA-1:exon:1591;Parent=Msa1338370-mRNA-1
tig0002041 exon 48068 48211 48068 ID=Msa1338370-mRNA-1:exon:1590;Parent=Msa1338370-mRNA-1
tig0002041 exon 48405 48524 48405 ID=Msa1338370-mRNA-1:exon:1589;Parent=Msa1338370-mRNA-1
tig0002041 exon 49067 49241 49067 ID=Msa1338370-mRNA-1:exon:1588;Parent=Msa1338370-mRNA-1
tig0002041 exon 49798 50158 49798 ID=Msa1338370-mRNA-1:exon:1587;Parent=Msa1338370-mRNA-1
tig0002041 five_prime_UTR 50142 50158 50142 ID=Msa1338370-mRNA-1:five_prime_utr;Parent=Msa1338370-mRNA-1
tig0002041 CDS 49798 50141 49798 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 49067 49241 49067 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 48405 48524 48405 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 48068 48211 48068 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 47808 47958 47808 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 47598 47686 47598 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 47237 47495 47237 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 46888 47021 46888 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 46522 46629 46522 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 44668 44811 44668 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 44363 44513 44363 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 44148 44236 44148 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 43779 44043 43779 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 43562 43695 43562 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
tig0002041 CDS 43313 43435 43313 ID=Msa1338370-mRNA-1:cds;Parent=Msa1338370-mRNA-1
Gene Sequence

>Msa1338370

ATGGCATCATCTTTAAGGTTCCTCCGAATGTGTCTGTCTTTTGTAATGTTCTTCCTCTTCATTTCACATTCATTCTCATCTCCAGCTTATCCCACAAACAATGACATTCTCCTCTCTTCAACTGCATCATCTTACCCAAAATTACAAGCAGAAAATCTCATAAGAGGACTTAATCTTTTTCCAAAAGATTCCATAAACACACCAGAGAATGATCCTCATTTTGTTCATGGAAATATTGTGGAAAAGAAGTTCACTTTCCCTGGTTTTGTTGACTCTGGTGCTTCTGTTGAAGAACTTGGTCATCATGCAGGCTATTATAGTCTTCCTCATTCCGAAGCTGCAAGGATGTTCTATTTTTTCTTTGAATCTCGAAACACTAAGGATGACCCTGTTGTTATATGGTTAACTGGAGGGCCAGGATGCAGCAGTGAAATTGCTATGTTTTATGAAAATGGTCCTTTTAAATTCTCCAAGGATAAGAACTTGTCCCTTGTTTGGAATGAATATGGATGGGACATGGCATCAAATATTATATTTGTAGACCAACCCACTGGAACAGGTTTCAGCTATACCACTGATGATAGCGACGTTCGACATGATGAAGACGGTGTTAGCAACGATCTATATGACTTCTTGCAGGCATTTTTCAAGGAACACCCTCAGTTCACTAAGAATGATTTTTATATTACCGGAGAATCATACGCTGGACATTACATTCCAGCTTTTGCATCTAGGGTTCATCAAGGAAACAAGGCAAAAGAAGGAATTCATATAAATCTAAAGGGTTTTGCTATTGGTAATGGATTAACCAATCCGGAAATTCAGTACAAGGCATATCCAGATTTTGCATTAGACAATGGACTAATTAATAAGGATGAACATGCCAACATCAACAAGTTGTTCCCACGATGCCAAAAGGCTATAGAATCTTGTGGCACTAAAGGTGGAGACGCATGCATGACTTCAAGAAACATTTGCAGTGAAATATTTGATCAGATCATGGACATAGCTGGCAACATTAATTACTATGACATTAGAAAGCAATGTGTGGGAAGTCTTTGTTACGACTTCTCCAATGCGGAAACATTCTTGAACATGAAGACAGTAAGGGAAGCTTTAGGTGTTGGGGACTTGGAATTTGTTTCTTGCAGTAGCACAGTATACAGTGCCATGTTGCAGGATTGGATGAAAAATCTAGAAGTGGGTATTCCTGCTCTTCTTGAGGATGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTGATGCCATGACGTGGTCAGGTCAAAAAGAATTTAAGGCGTCTCCTACAACCCCATATTTGGTTGATAGTGAAGAAGCAGGAGATCTGAAAAGCCACGGACCTCTTGCTTTCCTCAAGGTGAAAGAGGCTGGTCACATGGTTCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTAAAAGATTGGATGCAAGGGAAACTGATAAGGACAAGGGGAGGAGATAATGCATTTTTCAAGGAACACCCTCAGTTCACAAAGAATGATTTTTATATTACCGGAGAGTCATACGCTGGACATTACATTCCAGCTTTTGCATCTAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATCCATATAAATCTAAAGGGCTTTGCTATTGGTAATGGATTAACCAATCCTGAAATTCAGTACATGGCATATACAGATTATGCATTAGACAATGGACTGATTAATAAGGATGAATATGAAAGAATCAACAAGTTGATCCCACCATGTCAAAAGGCGGCAGAAAAATGTGGCACTGAAGGTGGACAAGCATGCGGGACTGCATTAACTACTTGTATGAAAATATTCTATCAGATCAGAAACATCACCAGCAACACTAATTACCACGACATTAGAAAGAAATGTGAGGGAGCTTTCGGTGCTTGTCATGACTTCTCTGACATGGAGACATTCTTGAACATGAAGACAGTAAAGGAAGCTTTAGGTGTTGGGGACTTGCAATTTGTTTCTTGCAGTTTCTTAGTATACCTTGCCATGTCGGATGATTTGATGAAAAATCTTGAAGTGGGTATTCCTGCTCTTCTTGAGGATGGAATCAAGTTACTTGTGTATGCTAGAGAAAAAGATCTAATATGCAATTGGCTTGGGAATTCAAGGTGGGTTGATGCCATGAAGTGGTCAGGTCAGACAACATTTAAGGAGTCTCCTACAACTTCATTTTTGGTTGATAGTGAAGAAGCAGGAATTCTGAAAAATCATGGACCTTTGGCTTTCCTTAAGGTGAAAGAGGCTGGTCACATGGTTCCTATGGATCAACCAAAAGTTGCACTTCAAATGTTACAAGATTGGATGCAAGGGAAACTGCACTCAGCACAAAACCAAAATCACATTCTTGTTGTATAA
Protein sequence

>Msa1338370

MASSLRFLRMCLSFVMFFLFISHSFSSPAYPTNNDILLSSTASSYPKLQAENLIRGLNLFPKDSINTPENDPHFVHGNIVEKKFTFPGFVDSGASVEELGHHAGYYSLPHSEAARMFYFFFESRNTKDDPVVIWLTGGPGCSSEIAMFYENGPFKFSKDKNLSLVWNEYGWDMASNIIFVDQPTGTGFSYTTDDSDVRHDEDGVSNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPAFASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYKAYPDFALDNGLINKDEHANINKLFPRCQKAIESCGTKGGDACMTSRNICSEIFDQIMDIAGNINYYDIRKQCVGSLCYDFSNAETFLNMKTVREALGVGDLEFVSCSSTVYSAMLQDWMKNLEVGIPALLEDGIKVLVYAGEEDLICNWLGNSRWVDAMTWSGQKEFKASPTTPYLVDSEEAGDLKSHGPLAFLKVKEAGHMVPMDQPKAALQMLKDWMQGKLIRTRGGDNAFFKEHPQFTKNDFYITGESYAGHYIPAFASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYMAYTDYALDNGLINKDEYERINKLIPPCQKAAEKCGTEGGQACGTALTTCMKIFYQIRNITSNTNYHDIRKKCEGAFGACHDFSDMETFLNMKTVKEALGVGDLQFVSCSFLVYLAMSDDLMKNLEVGIPALLEDGIKLLVYAREKDLICNWLGNSRWVDAMKWSGQTTFKESPTTSFLVDSEEAGILKNHGPLAFLKVKEAGHMVPMDQPKVALQMLQDWMQGKLHSAQNQNHILVV*