AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0418930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0418930 MtrunA17_Chr3g0116551 96.409 362 13 0 1 362 1 362 0.0 737
Msa0418930 MtrunA17_Chr4g0058081 76.243 362 84 2 1 362 1 360 0.0 592
Msa0418930 MtrunA17_Chr4g0041481 57.692 312 121 7 35 343 35 338 4.49e-125 363
Msa0418930 MtrunA17_Chr4g0041521 57.051 312 123 7 35 343 35 338 1.46e-124 362
Msa0418930 MtrunA17_Chr4g0041061 52.586 348 155 7 1 343 1 343 1.95e-124 362
Msa0418930 MtrunA17_Chr5g0405751 55.660 318 127 6 33 343 32 342 4.91e-124 360
Msa0418930 MtrunA17_Chr4g0024411 57.962 314 121 7 38 344 33 342 1.14e-123 360
Msa0418930 MtrunA17_Chr4g0040881 55.312 320 134 6 28 343 29 343 1.51e-123 359
Msa0418930 MtrunA17_Chr4g0060251 50.568 352 156 7 1 343 1 343 2.91e-123 358
Msa0418930 MtrunA17_Chr1g0208261 55.215 326 141 5 23 345 73 396 8.66e-122 361
Msa0418930 MtrunA17_Chr4g0041081 53.395 324 134 6 28 343 29 343 9.84e-122 355
Msa0418930 MtrunA17_Chr3g0144281 51.884 345 155 5 7 345 9 348 1.18e-121 355
Msa0418930 MtrunA17_Chr4g0053311 51.320 341 151 5 8 345 14 342 1.72e-121 355
Msa0418930 MtrunA17_Chr3g0134231 51.989 352 156 8 6 345 12 362 2.74e-120 355
Msa0418930 MtrunA17_Chr2g0315491 54.227 343 142 7 6 343 7 339 8.07e-119 347
Msa0418930 MtrunA17_Chr4g0040851 50.585 342 157 6 6 344 27 359 6.74e-117 343
Msa0418930 MtrunA17_Chr2g0325121 49.138 348 165 5 1 346 1 338 5.36e-115 337
Msa0418930 MtrunA17_Chr4g0041471 51.792 307 144 3 40 344 37 341 5.56e-113 332
Msa0418930 MtrunA17_Chr1g0153011 50.143 349 146 8 6 346 16 344 4.27e-110 329
Msa0418930 MtrunA17_Chr2g0319991 46.313 339 171 5 10 344 12 343 1.88e-105 313
Msa0418930 MtrunA17_Chr7g0248391 46.483 327 158 7 25 347 27 340 1.17e-99 298
Msa0418930 MtrunA17_Chr7g0248811 45.588 340 170 7 7 343 7 334 5.51e-98 294
Msa0418930 MtrunA17_Chr3g0142071 48.875 311 156 3 39 347 49 358 6.43e-98 298
Msa0418930 MtrunA17_Chr2g0283901 43.636 330 168 11 25 345 36 356 6.97e-83 260
Msa0418930 MtrunA17_Chr8g0379151 43.380 355 175 13 6 345 30 373 3.88e-76 239
Msa0418930 MtrunA17_Chr0c27g0493921 44.295 298 146 9 53 344 65 348 1.83e-73 231
Msa0418930 MtrunA17_Chr2g0283741 39.826 344 187 12 27 361 41 373 5.92e-73 231
Msa0418930 MtrunA17_Chr4g0070441 44.251 287 142 9 53 331 65 341 1.76e-69 221
Msa0418930 MtrunA17_Chr2g0283671 51.389 216 102 3 129 344 15 227 1.15e-68 215
Msa0418930 MtrunA17_Chr2g0311381 40.303 330 155 16 40 343 36 349 6.97e-64 207
Msa0418930 MtrunA17_Chr2g0311471 41.860 301 158 11 55 344 52 346 2.31e-62 203
Msa0418930 MtrunA17_Chr1g0155781 39.799 299 152 9 54 336 66 352 7.37e-62 202
Msa0418930 MtrunA17_Chr4g0035551 37.793 299 157 8 54 336 63 348 1.01e-58 194
Msa0418930 MtrunA17_Chr2g0311391 35.696 381 189 15 4 342 2 368 1.72e-57 191
Msa0418930 MtrunA17_Chr1g0156161 42.731 227 122 6 119 342 40 261 2.20e-56 185
Msa0418930 MtrunA17_Chr1g0199131 32.258 341 196 10 15 336 34 358 1.23e-52 179
Msa0418930 MtrunA17_Chr7g0248421 52.229 157 70 3 152 307 57 209 3.13e-44 151
Msa0418930 MtrunA17_Chr4g0036731 31.805 349 188 9 1 336 1 312 5.58e-44 154
Msa0418930 MtrunA17_Chr2g0283661 31.429 315 144 8 32 343 25 270 8.23e-44 152
Msa0418930 MtrunA17_Chr7g0248371 64.646 99 34 1 246 344 34 131 6.52e-43 146
Msa0418930 MtrunA17_Chr2g0283751 36.082 291 150 13 6 274 10 286 6.12e-42 148
Msa0418930 MtrunA17_Chr4g0036281 34.021 291 147 9 54 336 63 316 5.69e-41 146
Msa0418930 MtrunA17_Chr4g0037291 34.021 291 147 9 54 336 104 357 7.43e-41 147
Msa0418930 MtrunA17_Chr7g0248661 65.333 75 26 0 270 344 2 76 1.97e-32 116
Msa0418930 MtrunA17_Chr2g0311091 39.259 135 71 2 55 178 50 184 8.71e-25 99.8
Msa0418930 MtrunA17_Chr7g0271041 27.536 276 164 11 86 336 66 330 3.81e-24 101
Msa0418930 MtrunA17_Chr1g0156771 47.525 101 49 3 127 224 54 153 1.92e-23 95.1
Msa0418930 MtrunA17_Chr7g0271031 30.738 244 137 10 130 350 153 387 3.51e-23 99.8
Msa0418930 MtrunA17_Chr8g0379671 39.231 130 68 5 169 296 23 143 2.41e-16 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0418930 AT5G50260.1 70.833 360 104 1 4 362 2 361 0.0 556
Msa0418930 AT3G48340.1 66.759 361 117 2 4 362 2 361 0.0 514
Msa0418930 AT3G48350.1 63.611 360 129 2 4 362 2 360 3.10e-176 494
Msa0418930 AT3G48350.2 63.406 276 100 1 4 278 2 277 6.72e-133 382
Msa0418930 AT4G35350.1 51.862 349 158 4 3 345 9 353 1.93e-122 357
Msa0418930 AT1G20850.1 54.658 322 142 3 25 345 36 354 3.96e-122 357
Msa0418930 AT1G47128.1 48.991 347 166 4 6 346 13 354 2.07e-117 348
Msa0418930 AT5G43060.1 50.286 350 158 5 6 345 11 354 2.68e-117 348
Msa0418930 AT3G19390.1 48.159 353 174 6 1 350 5 351 1.22e-115 343
Msa0418930 AT5G45890.1 47.714 350 165 7 6 343 1 344 2.82e-115 338
Msa0418930 AT4G36880.1 51.368 329 149 6 32 351 41 367 8.14e-114 336
Msa0418930 AT1G06260.1 48.571 350 164 7 1 345 5 343 1.48e-107 319
Msa0418930 AT3G19400.1 51.592 314 142 7 39 347 43 351 1.50e-107 320
Msa0418930 AT4G11310.1 46.797 359 170 8 3 347 4 355 1.41e-105 315
Msa0418930 AT4G11320.2 46.499 357 169 8 6 347 13 362 3.07e-103 309
Msa0418930 AT4G11320.1 46.499 357 169 8 6 347 13 362 3.07e-103 309
Msa0418930 AT2G27420.1 45.533 347 174 5 6 344 8 347 4.13e-99 298
Msa0418930 AT4G23520.1 46.835 316 158 6 39 350 46 355 1.04e-98 297
Msa0418930 AT1G09850.1 48.710 310 152 4 38 345 30 334 1.31e-98 299
Msa0418930 AT3G49340.1 44.118 340 183 5 9 344 4 340 1.79e-97 293
Msa0418930 AT2G34080.1 44.348 345 181 6 6 344 5 344 4.53e-94 285
Msa0418930 AT1G29090.1 44.444 360 169 11 1 344 10 354 2.43e-90 275
Msa0418930 AT4G35350.2 49.645 282 132 4 3 278 9 286 5.32e-88 267
Msa0418930 AT3G43960.1 45.538 325 161 11 39 354 40 357 5.78e-88 270
Msa0418930 AT1G29080.1 41.311 351 193 8 1 344 1 345 1.47e-87 268
Msa0418930 AT1G29110.1 41.693 319 165 7 32 344 30 333 1.75e-78 244
Msa0418930 AT3G19400.2 50.000 240 111 6 39 273 43 278 6.31e-72 226
Msa0418930 AT5G60360.1 42.333 300 153 9 51 344 71 356 5.33e-70 223
Msa0418930 AT3G45310.1 41.391 302 153 10 51 344 71 356 1.36e-67 217
Msa0418930 AT5G60360.2 42.000 300 153 10 51 344 71 355 1.83e-67 217
Msa0418930 AT3G45310.2 41.060 302 153 11 51 344 71 355 4.63e-65 211
Msa0418930 AT5G60360.3 42.143 280 146 8 51 324 71 340 7.94e-65 210
Msa0418930 AT2G21430.1 34.091 352 198 10 5 336 12 349 4.66e-61 200
Msa0418930 AT4G39090.1 37.458 299 159 8 54 336 66 352 1.25e-57 191
Msa0418930 AT3G54940.2 38.127 299 159 9 54 336 66 354 2.69e-55 185
Msa0418930 AT4G16190.1 37.919 298 159 9 55 336 71 358 9.55e-54 181
Msa0418930 AT3G54940.3 38.140 215 121 4 54 260 66 276 4.20e-39 140
Msa0418930 AT1G02305.1 27.596 337 209 11 50 362 33 358 1.11e-26 109
Msa0418930 AT4G01610.1 29.352 293 166 13 85 350 65 343 3.32e-23 99.8
Msa0418930 AT4G01610.2 28.669 293 168 13 85 350 65 343 3.09e-21 94.0
Msa0418930 AT2G22160.1 46.465 99 49 1 53 151 8 102 9.71e-21 86.7
Msa0418930 AT1G02300.1 31.381 239 132 10 147 362 146 375 3.20e-20 91.3

Find 114 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACCTATCTGTCTTTATT+TGG 0.189761 3_2:+66798342 None:intergenic
CCGTTGATGGAACTAATTAT+TGG 0.225728 3_2:-66797692 Msa0418930:CDS
TTTGAGTACATTAAGCAAAA+AGG 0.295259 3_2:-66798239 Msa0418930:CDS
ATCAGATCCTCCGGCATCTA+TGG 0.300046 3_2:+66797958 None:intergenic
AGTTTCCATGTTTCTTTGTT+TGG 0.301765 3_2:+66799203 None:intergenic
TTGGAAGCAATTCACTTGTT+TGG 0.302311 3_2:+66799222 None:intergenic
ACATGACCAACCATGAATTT+AGG 0.309976 3_2:-66798924 Msa0418930:CDS
TTTGATGACAATGTATGATT+TGG 0.320379 3_2:-66797389 Msa0418930:three_prime_UTR
TGTCCACAACACCAACAAAA+TGG 0.326241 3_2:-66798983 Msa0418930:CDS
GAACTCATGGGGAGCGGAAT+GGG 0.328427 3_2:-66797661 Msa0418930:CDS
ATGTTTGTGTTGTTCAAGTA+TGG 0.330691 3_2:+66799403 None:intergenic
CTGAGGACACATCTTTATCT+TGG 0.332566 3_2:+66799115 None:intergenic
AAGCTCCTGCTTCTGTTGAT+TGG 0.348923 3_2:-66798810 Msa0418930:CDS
TCAAATATTTAAAGTTCATA+AGG 0.354352 3_2:+66797420 None:intergenic
CTATTACAGGGAGTATTTAC+TGG 0.367645 3_2:-66797768 Msa0418930:intron
AATGATGGAGATGATAAAAT+AGG 0.371330 3_2:+66799378 None:intergenic
GCATCTATGGCTACGGATAC+AGG 0.385812 3_2:+66797971 None:intergenic
TCAACTGTTGTAGCTGTTGA+AGG 0.388321 3_2:-66798371 Msa0418930:CDS
TTGTTAAGTTTCAACTTGTA+AGG 0.389898 3_2:+66798955 None:intergenic
AGGAGGTTAAAGGTTTCTTA+AGG 0.390380 3_2:+66799340 None:intergenic
AGGATGCAATGGTGGGCTAA+TGG 0.392108 3_2:-66798270 Msa0418930:CDS
GATCCATCATTTGCTGTGTA+AGG 0.397020 3_2:+66798191 None:intergenic
GTCCCAGCTGTATCAATTGA+TGG 0.409945 3_2:-66798052 Msa0418930:CDS
CACTTCCACGTGGCGTGCCT+CGG 0.411657 3_2:+66798860 None:intergenic
GATTGTTCTGTCCATTGCTT+TGG 0.412192 3_2:-66799166 Msa0418930:CDS
AACATTCATTCAAATATCAA+TGG 0.413261 3_2:-66797261 Msa0418930:three_prime_UTR
GGAGGTTAAAGGTTTCTTAA+GGG 0.416407 3_2:+66799341 None:intergenic
ATCAACAGAAGCAGGAGCTT+TGG 0.419799 3_2:+66798813 None:intergenic
TGTATTAATTGAATGGAAGT+TGG 0.428819 3_2:+66799247 None:intergenic
TGACCATCAATTGATACAGC+TGG 0.435646 3_2:+66798049 None:intergenic
GGTGTAGCAATAGTAGGATA+TGG 0.443941 3_2:-66797720 Msa0418930:CDS
TGATGGTCATGAGACTGTTC+CGG 0.449890 3_2:-66798035 Msa0418930:CDS
GGAGTCACCACACGGTTTCT+CGG 0.450148 3_2:-66799059 Msa0418930:CDS
GCAGGGGACTGTTTATATAG+AGG 0.454291 3_2:+66799285 None:intergenic
TTTGGAATGTATTAATTGAA+TGG 0.454640 3_2:+66799240 None:intergenic
GGATATGGAACAACCGTTGA+TGG 0.454887 3_2:-66797705 Msa0418930:CDS
CGAGGCACGCCACGTGGAAG+TGG 0.460548 3_2:-66798859 Msa0418930:CDS
TCATCCTTGGTAGATGATAA+AGG 0.462977 3_2:+66797525 None:intergenic
TAAACCAAATAAAGACAGAT+AGG 0.464117 3_2:-66798346 Msa0418930:CDS
TTCCTCCAATCAACAGAAGC+AGG 0.475830 3_2:+66798805 None:intergenic
CATAGGTAGTCCTAAATTCA+TGG 0.476124 3_2:+66798914 None:intergenic
CTCCTGCTTCTGTTGATTGG+AGG 0.481655 3_2:-66798807 Msa0418930:CDS
CATAATGGTTGCAGGGAATG+AGG 0.484219 3_2:+66797290 None:intergenic
ATTGGATTGTGAGGAACTCA+TGG 0.493389 3_2:-66797674 Msa0418930:CDS
GGACTGTTTATATAGAGGAT+TGG 0.494115 3_2:+66799290 None:intergenic
AATCATGGTGTAGCAATAGT+AGG 0.495226 3_2:-66797726 Msa0418930:CDS
GTCACTGAGGTCAAGGATCA+AGG 0.495703 3_2:-66798772 Msa0418930:CDS
TCTAACAAGGAAGGACTTTG+TGG 0.498260 3_2:-66797603 Msa0418930:CDS
GAGGTTAAAGGTTTCTTAAG+GGG 0.504781 3_2:+66799342 None:intergenic
GTAGATGATAAAGGTCCTGC+TGG 0.507201 3_2:+66797534 None:intergenic
AAACATTCAAAGCTCATCCT+TGG 0.508057 3_2:+66797512 None:intergenic
TGGATGGAAAGGGAAAGAGC+AGG 0.508669 3_2:+66799267 None:intergenic
TGAATGGAAGTTGGATGGAA+AGG 0.510016 3_2:+66799256 None:intergenic
TACCCTTACACAGCAAATGA+TGG 0.512248 3_2:-66798194 Msa0418930:CDS
GAATGGAAGTTGGATGGAAA+GGG 0.512638 3_2:+66799257 None:intergenic
GAATTTAGGACTACCTATGC+TGG 0.513702 3_2:-66798910 Msa0418930:CDS
GTCCTCAGACAAAAGCTTGT+GGG 0.513806 3_2:-66799100 Msa0418930:CDS
TTATATAGAGGATTGGAGAA+AGG 0.514545 3_2:+66799297 None:intergenic
GGATGAACAATGTATAATGA+TGG 0.515697 3_2:+66799363 None:intergenic
GGAACTCATGGGGAGCGGAA+TGG 0.524402 3_2:-66797662 Msa0418930:CDS
AGGACTTTGTGGCATAGCTA+TGG 0.526821 3_2:-66797592 Msa0418930:CDS
TGTGACAATCAAGAAAATCA+AGG 0.527505 3_2:-66798290 Msa0418930:CDS
GAAAATCAAGGATGCAATGG+TGG 0.535112 3_2:-66798278 Msa0418930:CDS
TCCTCCGGCATCTATGGCTA+CGG 0.543132 3_2:+66797964 None:intergenic
TTAATTGAATGGAAGTTGGA+TGG 0.545409 3_2:+66799251 None:intergenic
GACTACCTATGCTGGATCAA+AGG 0.546319 3_2:-66798902 Msa0418930:CDS
CAAGAAAATCAAGGATGCAA+TGG 0.548537 3_2:-66798281 Msa0418930:CDS
AAACTGGAAATCAGATCCTC+CGG 0.552551 3_2:+66797949 None:intergenic
TCTGTTGATTGGAGGAAGAA+AGG 0.553167 3_2:-66798799 Msa0418930:CDS
GGCTACGGATACAGGTTGGT+TGG 0.553342 3_2:+66797979 None:intergenic
GGATGGAAAGGGAAAGAGCA+GGG 0.554487 3_2:+66799268 None:intergenic
TTTAAGACATAATGGTTGCA+GGG 0.557691 3_2:+66797283 None:intergenic
AGGTGCTGTCACTGAGGTCA+AGG 0.558185 3_2:-66798779 Msa0418930:CDS
ATAATGGTTGCAGGGAATGA+GGG 0.560027 3_2:+66797291 None:intergenic
ATCCATCATTTGCTGTGTAA+GGG 0.560080 3_2:+66798192 None:intergenic
TGTGGTAAAGAGCTAAATCA+TGG 0.564153 3_2:-66797741 Msa0418930:CDS
TTGTTCAAGTATGGAAGCAA+AGG 0.571573 3_2:+66799412 None:intergenic
CCAATAATTAGTTCCATCAA+CGG 0.573198 3_2:+66797692 None:intergenic
TGTGGGACTTATACGAGAGA+TGG 0.573304 3_2:-66799083 Msa0418930:CDS
TTGGATTGTGAGGAACTCAT+GGG 0.574375 3_2:-66797673 Msa0418930:CDS
AACTCATGGGGAGCGGAATG+GGG 0.577276 3_2:-66797660 Msa0418930:CDS
GACCATCAATTGATACAGCT+GGG 0.584179 3_2:+66798050 None:intergenic
AAAGCATCTTCATCGTTAGC+CGG 0.584931 3_2:+66798016 None:intergenic
AAATTCATGGTTGGTCATGT+CGG 0.587621 3_2:+66798927 None:intergenic
GGAGCGGAATGGGGTGAACA+AGG 0.588520 3_2:-66797651 Msa0418930:CDS
ATTAACCTTTGATCCAGCAT+AGG 0.590030 3_2:+66798897 None:intergenic
GGAGTATTTACTGGCGATTG+TGG 0.593617 3_2:-66797759 Msa0418930:CDS
ATCTTGGAAATCGAAGCTCT+CGG 0.596119 3_2:+66799131 None:intergenic
TACTTCAAGAACCAAAGCAA+TGG 0.600914 3_2:+66799155 None:intergenic
TGTGAGGAACTCATGGGGAG+CGG 0.601438 3_2:-66797667 Msa0418930:CDS
TGTCCTCAGACAAAAGCTTG+TGG 0.605870 3_2:-66799101 Msa0418930:CDS
ATGTTCCGAGGCACGCCACG+TGG 0.610728 3_2:-66798865 Msa0418930:CDS
GCGTGCCTCGGAACATTCTG+TGG 0.611727 3_2:+66798872 None:intergenic
AGGAATGTATCTAACAAGGA+AGG 0.612463 3_2:-66797612 Msa0418930:CDS
GAACTAATTATTGGATTGTG+AGG 0.613342 3_2:-66797683 Msa0418930:CDS
GGTAGTCCTAAATTCATGGT+TGG 0.613532 3_2:+66798918 None:intergenic
TGCTTCCAAACAAAGAAACA+TGG 0.616974 3_2:-66799208 Msa0418930:exon
AAAATCAAGGATGCAATGGT+GGG 0.617377 3_2:-66798277 Msa0418930:CDS
ATAAGCTCTTGTTCAGACAA+AGG 0.634536 3_2:+66798317 None:intergenic
AAGGTTACATCAGAATGCAA+AGG 0.641547 3_2:-66797632 Msa0418930:CDS
GCAAAGGAATGTATCTAACA+AGG 0.642601 3_2:-66797616 Msa0418930:CDS
CTATGGCTACGGATACAGGT+TGG 0.643007 3_2:+66797975 None:intergenic
GATGGAAAGGGAAAGAGCAG+GGG 0.645005 3_2:+66799269 None:intergenic
GGGACTTATACGAGAGATGG+AGG 0.652822 3_2:-66799080 Msa0418930:CDS
GTATCCGTAGCCATAGATGC+CGG 0.655334 3_2:-66797968 Msa0418930:CDS
AGGACCTTTATCATCTACCA+AGG 0.670444 3_2:-66797529 Msa0418930:CDS
AATCACCACAGAATGTTCCG+AGG 0.693791 3_2:-66798877 Msa0418930:CDS
TCCGTAGCCATAGATGCCGG+AGG 0.697215 3_2:-66797965 Msa0418930:CDS
GTCAAGGATCAAGGCCAATG+TGG 0.699707 3_2:-66798763 Msa0418930:intron
GAGATGGAGGAGTCACCACA+CGG 0.702988 3_2:-66799067 Msa0418930:CDS
TGGATTGTGAGGAACTCATG+GGG 0.709984 3_2:-66797672 Msa0418930:CDS
CAAGGTTCCGAGAAACCGTG+TGG 0.716333 3_2:+66799052 None:intergenic
GAAGAAAGGTGCTGTCACTG+AGG 0.722701 3_2:-66798785 Msa0418930:CDS
ATGAATGTTCCACTTCCACG+TGG 0.756623 3_2:+66798850 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTACTTTTTTATTTTGA+AGG + chr3_2:66798808-66798827 None:intergenic 10.0%
!!! TTTTTACTTTTTTATTTTGA+AGG + chr3_2:66798808-66798827 None:intergenic 10.0%
!! AGTGAATTGAATTTATAAAT+AGG + chr3_2:66798083-66798102 None:intergenic 15.0%
!! TAGTATAACTATTTGAAAAT+AGG + chr3_2:66798147-66798166 None:intergenic 15.0%
!! TAAAAAAGTAAAAAAAGAGA+TGG - chr3_2:66798814-66798833 Msa0418930:CDS 15.0%
!!! TCAAATATTTAAAGTTCATA+AGG + chr3_2:66799251-66799270 None:intergenic 15.0%
!! AGTGAATTGAATTTATAAAT+AGG + chr3_2:66798083-66798102 None:intergenic 15.0%
!! TAGTATAACTATTTGAAAAT+AGG + chr3_2:66798147-66798166 None:intergenic 15.0%
!! TAAAAAAGTAAAAAAAGAGA+TGG - chr3_2:66798814-66798833 Msa0418930:CDS 15.0%
!!! TCAAATATTTAAAGTTCATA+AGG + chr3_2:66799251-66799270 None:intergenic 15.0%
!! AAACTCAATAAAAAAATGTG+AGG + chr3_2:66797351-66797370 None:intergenic 20.0%
!!! TTTGGAATGTATTAATTGAA+TGG + chr3_2:66797431-66797450 None:intergenic 20.0%
!!! ATGAACAATTTTTGAATCTT+AGG + chr3_2:66798583-66798602 None:intergenic 20.0%
!!! ATGAATGTTTTAAGACATAA+TGG + chr3_2:66799396-66799415 None:intergenic 20.0%
!! AACATTCATTCAAATATCAA+TGG - chr3_2:66799407-66799426 Msa0418930:five_prime_UTR 20.0%
!! AAACTCAATAAAAAAATGTG+AGG + chr3_2:66797351-66797370 None:intergenic 20.0%
!!! TTTGGAATGTATTAATTGAA+TGG + chr3_2:66797431-66797450 None:intergenic 20.0%
!!! ATGAACAATTTTTGAATCTT+AGG + chr3_2:66798583-66798602 None:intergenic 20.0%
!!! ATGAATGTTTTAAGACATAA+TGG + chr3_2:66799396-66799415 None:intergenic 20.0%
!! AACATTCATTCAAATATCAA+TGG - chr3_2:66799407-66799426 Msa0418930:five_prime_UTR 20.0%
!! AATGATGGAGATGATAAAAT+AGG + chr3_2:66797293-66797312 None:intergenic 25.0%
! TGTATTAATTGAATGGAAGT+TGG + chr3_2:66797424-66797443 None:intergenic 25.0%
! TTGTTAAGTTTCAACTTGTA+AGG + chr3_2:66797716-66797735 None:intergenic 25.0%
!!! CTTTTTTTAACTTACCACAT+TGG + chr3_2:66797922-66797941 None:intergenic 25.0%
!! TATTGACTACATAAATGCAT+AGG - chr3_2:66798103-66798122 Msa0418930:intron 25.0%
!! TTGTGATTAATGTTTTGTAC+AGG - chr3_2:66798258-66798277 Msa0418930:CDS 25.0%
! TAAACCAAATAAAGACAGAT+AGG - chr3_2:66798322-66798341 Msa0418930:CDS 25.0%
! TTTGAGTACATTAAGCAAAA+AGG - chr3_2:66798429-66798448 Msa0418930:intron 25.0%
! TATAATTGACATGCAACTTT+AGG - chr3_2:66798555-66798574 Msa0418930:intron 25.0%
!! ATTTTGTATACACCTATTAC+AGG - chr3_2:66798887-66798906 Msa0418930:CDS 25.0%
!! TTTTGTATACACCTATTACA+GGG - chr3_2:66798888-66798907 Msa0418930:CDS 25.0%
!! TTTGATGACAATGTATGATT+TGG - chr3_2:66799279-66799298 Msa0418930:five_prime_UTR 25.0%
!! AATGATGGAGATGATAAAAT+AGG + chr3_2:66797293-66797312 None:intergenic 25.0%
! TGTATTAATTGAATGGAAGT+TGG + chr3_2:66797424-66797443 None:intergenic 25.0%
! TTGTTAAGTTTCAACTTGTA+AGG + chr3_2:66797716-66797735 None:intergenic 25.0%
!!! CTTTTTTTAACTTACCACAT+TGG + chr3_2:66797922-66797941 None:intergenic 25.0%
!! TATTGACTACATAAATGCAT+AGG - chr3_2:66798103-66798122 Msa0418930:intron 25.0%
!! TTGTGATTAATGTTTTGTAC+AGG - chr3_2:66798258-66798277 Msa0418930:CDS 25.0%
! TAAACCAAATAAAGACAGAT+AGG - chr3_2:66798322-66798341 Msa0418930:CDS 25.0%
! TTTGAGTACATTAAGCAAAA+AGG - chr3_2:66798429-66798448 Msa0418930:intron 25.0%
! TATAATTGACATGCAACTTT+AGG - chr3_2:66798555-66798574 Msa0418930:intron 25.0%
!! ATTTTGTATACACCTATTAC+AGG - chr3_2:66798887-66798906 Msa0418930:CDS 25.0%
!! TTTTGTATACACCTATTACA+GGG - chr3_2:66798888-66798907 Msa0418930:CDS 25.0%
!! TTTGATGACAATGTATGATT+TGG - chr3_2:66799279-66799298 Msa0418930:five_prime_UTR 25.0%
! ATGTTTGTGTTGTTCAAGTA+TGG + chr3_2:66797268-66797287 None:intergenic 30.0%
GGATGAACAATGTATAATGA+TGG + chr3_2:66797308-66797327 None:intergenic 30.0%
AAAAAATGTGAGGAGGTTAA+AGG + chr3_2:66797341-66797360 None:intergenic 30.0%
CTCAATAAAAAAATGTGAGG+AGG + chr3_2:66797348-66797367 None:intergenic 30.0%
TTATATAGAGGATTGGAGAA+AGG + chr3_2:66797374-66797393 None:intergenic 30.0%
TTAATTGAATGGAAGTTGGA+TGG + chr3_2:66797420-66797439 None:intergenic 30.0%
AGTTTCCATGTTTCTTTGTT+TGG + chr3_2:66797468-66797487 None:intergenic 30.0%
AAAGCTATAGTGCATAATAG+TGG + chr3_2:66798223-66798242 None:intergenic 30.0%
CTAACCTATCTGTCTTTATT+TGG + chr3_2:66798329-66798348 None:intergenic 30.0%
TGTGACAATCAAGAAAATCA+AGG - chr3_2:66798378-66798397 Msa0418930:CDS 30.0%
TCAAAAATTGTTCATGTTGC+AGG - chr3_2:66798588-66798607 Msa0418930:intron 30.0%
! ATCTGATTTCCAGTTTTACT+CGG - chr3_2:66798726-66798745 Msa0418930:intron 30.0%
CCAATAATTAGTTCCATCAA+CGG + chr3_2:66798979-66798998 None:intergenic 30.0%
GAACTAATTATTGGATTGTG+AGG - chr3_2:66798985-66799004 Msa0418930:CDS 30.0%
!! TTTTGGAGGAGTTTTTAACT+GGG + chr3_2:66799112-66799131 None:intergenic 30.0%
!! TTTTTGGAGGAGTTTTTAAC+TGG + chr3_2:66799113-66799132 None:intergenic 30.0%
! TTTAAGACATAATGGTTGCA+GGG + chr3_2:66799388-66799407 None:intergenic 30.0%
!!! TTTTAAGACATAATGGTTGC+AGG + chr3_2:66799389-66799408 None:intergenic 30.0%
! ATGTTTGTGTTGTTCAAGTA+TGG + chr3_2:66797268-66797287 None:intergenic 30.0%
GGATGAACAATGTATAATGA+TGG + chr3_2:66797308-66797327 None:intergenic 30.0%
AAAAAATGTGAGGAGGTTAA+AGG + chr3_2:66797341-66797360 None:intergenic 30.0%
CTCAATAAAAAAATGTGAGG+AGG + chr3_2:66797348-66797367 None:intergenic 30.0%
TTATATAGAGGATTGGAGAA+AGG + chr3_2:66797374-66797393 None:intergenic 30.0%
TTAATTGAATGGAAGTTGGA+TGG + chr3_2:66797420-66797439 None:intergenic 30.0%
AGTTTCCATGTTTCTTTGTT+TGG + chr3_2:66797468-66797487 None:intergenic 30.0%
AAAGCTATAGTGCATAATAG+TGG + chr3_2:66798223-66798242 None:intergenic 30.0%
CTAACCTATCTGTCTTTATT+TGG + chr3_2:66798329-66798348 None:intergenic 30.0%
TGTGACAATCAAGAAAATCA+AGG - chr3_2:66798378-66798397 Msa0418930:CDS 30.0%
TCAAAAATTGTTCATGTTGC+AGG - chr3_2:66798588-66798607 Msa0418930:intron 30.0%
! ATCTGATTTCCAGTTTTACT+CGG - chr3_2:66798726-66798745 Msa0418930:intron 30.0%
CCAATAATTAGTTCCATCAA+CGG + chr3_2:66798979-66798998 None:intergenic 30.0%
GAACTAATTATTGGATTGTG+AGG - chr3_2:66798985-66799004 Msa0418930:CDS 30.0%
!! TTTTGGAGGAGTTTTTAACT+GGG + chr3_2:66799112-66799131 None:intergenic 30.0%
!! TTTTTGGAGGAGTTTTTAAC+TGG + chr3_2:66799113-66799132 None:intergenic 30.0%
! TTTAAGACATAATGGTTGCA+GGG + chr3_2:66799388-66799407 None:intergenic 30.0%
!!! TTTTAAGACATAATGGTTGC+AGG + chr3_2:66799389-66799408 None:intergenic 30.0%
TTGTTCAAGTATGGAAGCAA+AGG + chr3_2:66797259-66797278 None:intergenic 35.0%
GAGGTTAAAGGTTTCTTAAG+GGG + chr3_2:66797329-66797348 None:intergenic 35.0%
GGAGGTTAAAGGTTTCTTAA+GGG + chr3_2:66797330-66797349 None:intergenic 35.0%
AGGAGGTTAAAGGTTTCTTA+AGG + chr3_2:66797331-66797350 None:intergenic 35.0%
GGACTGTTTATATAGAGGAT+TGG + chr3_2:66797381-66797400 None:intergenic 35.0%
TTGGAAGCAATTCACTTGTT+TGG + chr3_2:66797449-66797468 None:intergenic 35.0%
TGCTTCCAAACAAAGAAACA+TGG - chr3_2:66797460-66797479 Msa0418930:three_prime_UTR 35.0%
TACTTCAAGAACCAAAGCAA+TGG + chr3_2:66797516-66797535 None:intergenic 35.0%
!!! TATCCATTTTGTTGGTGTTG+TGG + chr3_2:66797691-66797710 None:intergenic 35.0%
! GTAAGGCTTATCCATTTTGT+TGG + chr3_2:66797699-66797718 None:intergenic 35.0%
! AAATTCATGGTTGGTCATGT+CGG + chr3_2:66797744-66797763 None:intergenic 35.0%
ACATGACCAACCATGAATTT+AGG - chr3_2:66797744-66797763 Msa0418930:CDS 35.0%
CATAGGTAGTCCTAAATTCA+TGG + chr3_2:66797757-66797776 None:intergenic 35.0%
ATTAACCTTTGATCCAGCAT+AGG + chr3_2:66797774-66797793 None:intergenic 35.0%
GTTGCAAACCTGAAACTTAA+AGG - chr3_2:66798039-66798058 Msa0418930:CDS 35.0%
ATAAGCTCTTGTTCAGACAA+AGG + chr3_2:66798354-66798373 None:intergenic 35.0%
CAAGAAAATCAAGGATGCAA+TGG - chr3_2:66798387-66798406 Msa0418930:CDS 35.0%
AAAATCAAGGATGCAATGGT+GGG - chr3_2:66798391-66798410 Msa0418930:CDS 35.0%
GAGTACATTAAGCAAAAAGG+TGG - chr3_2:66798432-66798451 Msa0418930:intron 35.0%
!! ATCCATCATTTGCTGTGTAA+GGG + chr3_2:66798479-66798498 None:intergenic 35.0%
! TTTTTACCTCCGAGTAAAAC+TGG + chr3_2:66798738-66798757 None:intergenic 35.0%
ATTCTCTTGTGTCAATAGAG+AGG + chr3_2:66798772-66798791 None:intergenic 35.0%
CAGTAAATACTCCCTGTAAT+AGG + chr3_2:66798902-66798921 None:intergenic 35.0%
!! CTATTACAGGGAGTATTTAC+TGG - chr3_2:66798900-66798919 Msa0418930:CDS 35.0%
TGTGGTAAAGAGCTAAATCA+TGG - chr3_2:66798927-66798946 Msa0418930:CDS 35.0%
AATCATGGTGTAGCAATAGT+AGG - chr3_2:66798942-66798961 Msa0418930:CDS 35.0%
! CCGTTGATGGAACTAATTAT+TGG - chr3_2:66798976-66798995 Msa0418930:CDS 35.0%
AAGGTTACATCAGAATGCAA+AGG - chr3_2:66799036-66799055 Msa0418930:CDS 35.0%
GCAAAGGAATGTATCTAACA+AGG - chr3_2:66799052-66799071 Msa0418930:CDS 35.0%
AGGAATGTATCTAACAAGGA+AGG - chr3_2:66799056-66799075 Msa0418930:CDS 35.0%
TCATCCTTGGTAGATGATAA+AGG + chr3_2:66799146-66799165 None:intergenic 35.0%
AAACATTCAAAGCTCATCCT+TGG + chr3_2:66799159-66799178 None:intergenic 35.0%
TTGTTCAAGTATGGAAGCAA+AGG + chr3_2:66797259-66797278 None:intergenic 35.0%
GAGGTTAAAGGTTTCTTAAG+GGG + chr3_2:66797329-66797348 None:intergenic 35.0%
GGAGGTTAAAGGTTTCTTAA+GGG + chr3_2:66797330-66797349 None:intergenic 35.0%
AGGAGGTTAAAGGTTTCTTA+AGG + chr3_2:66797331-66797350 None:intergenic 35.0%
GGACTGTTTATATAGAGGAT+TGG + chr3_2:66797381-66797400 None:intergenic 35.0%
TTGGAAGCAATTCACTTGTT+TGG + chr3_2:66797449-66797468 None:intergenic 35.0%
TGCTTCCAAACAAAGAAACA+TGG - chr3_2:66797460-66797479 Msa0418930:three_prime_UTR 35.0%
TACTTCAAGAACCAAAGCAA+TGG + chr3_2:66797516-66797535 None:intergenic 35.0%
!!! TATCCATTTTGTTGGTGTTG+TGG + chr3_2:66797691-66797710 None:intergenic 35.0%
! GTAAGGCTTATCCATTTTGT+TGG + chr3_2:66797699-66797718 None:intergenic 35.0%
! AAATTCATGGTTGGTCATGT+CGG + chr3_2:66797744-66797763 None:intergenic 35.0%
ACATGACCAACCATGAATTT+AGG - chr3_2:66797744-66797763 Msa0418930:CDS 35.0%
CATAGGTAGTCCTAAATTCA+TGG + chr3_2:66797757-66797776 None:intergenic 35.0%
ATTAACCTTTGATCCAGCAT+AGG + chr3_2:66797774-66797793 None:intergenic 35.0%
GTTGCAAACCTGAAACTTAA+AGG - chr3_2:66798039-66798058 Msa0418930:CDS 35.0%
ATAAGCTCTTGTTCAGACAA+AGG + chr3_2:66798354-66798373 None:intergenic 35.0%
CAAGAAAATCAAGGATGCAA+TGG - chr3_2:66798387-66798406 Msa0418930:CDS 35.0%
AAAATCAAGGATGCAATGGT+GGG - chr3_2:66798391-66798410 Msa0418930:CDS 35.0%
GAGTACATTAAGCAAAAAGG+TGG - chr3_2:66798432-66798451 Msa0418930:intron 35.0%
!! ATCCATCATTTGCTGTGTAA+GGG + chr3_2:66798479-66798498 None:intergenic 35.0%
! TTTTTACCTCCGAGTAAAAC+TGG + chr3_2:66798738-66798757 None:intergenic 35.0%
ATTCTCTTGTGTCAATAGAG+AGG + chr3_2:66798772-66798791 None:intergenic 35.0%
CAGTAAATACTCCCTGTAAT+AGG + chr3_2:66798902-66798921 None:intergenic 35.0%
!! CTATTACAGGGAGTATTTAC+TGG - chr3_2:66798900-66798919 Msa0418930:CDS 35.0%
TGTGGTAAAGAGCTAAATCA+TGG - chr3_2:66798927-66798946 Msa0418930:CDS 35.0%
AATCATGGTGTAGCAATAGT+AGG - chr3_2:66798942-66798961 Msa0418930:CDS 35.0%
! CCGTTGATGGAACTAATTAT+TGG - chr3_2:66798976-66798995 Msa0418930:CDS 35.0%
AAGGTTACATCAGAATGCAA+AGG - chr3_2:66799036-66799055 Msa0418930:CDS 35.0%
GCAAAGGAATGTATCTAACA+AGG - chr3_2:66799052-66799071 Msa0418930:CDS 35.0%
AGGAATGTATCTAACAAGGA+AGG - chr3_2:66799056-66799075 Msa0418930:CDS 35.0%
TCATCCTTGGTAGATGATAA+AGG + chr3_2:66799146-66799165 None:intergenic 35.0%
AAACATTCAAAGCTCATCCT+TGG + chr3_2:66799159-66799178 None:intergenic 35.0%
GAATGGAAGTTGGATGGAAA+GGG + chr3_2:66797414-66797433 None:intergenic 40.0%
TGAATGGAAGTTGGATGGAA+AGG + chr3_2:66797415-66797434 None:intergenic 40.0%
GATTGTTCTGTCCATTGCTT+TGG - chr3_2:66797502-66797521 Msa0418930:exon 40.0%
ATCTTGGAAATCGAAGCTCT+CGG + chr3_2:66797540-66797559 None:intergenic 40.0%
CTGAGGACACATCTTTATCT+TGG + chr3_2:66797556-66797575 None:intergenic 40.0%
!! AGCGCTTTTGTTTCTCATCA+AGG + chr3_2:66797637-66797656 None:intergenic 40.0%
TGTCCACAACACCAACAAAA+TGG - chr3_2:66797685-66797704 Msa0418930:CDS 40.0%
GGTAGTCCTAAATTCATGGT+TGG + chr3_2:66797753-66797772 None:intergenic 40.0%
! GAATTTAGGACTACCTATGC+TGG - chr3_2:66797758-66797777 Msa0418930:CDS 40.0%
! TCTGTTGATTGGAGGAAGAA+AGG - chr3_2:66797869-66797888 Msa0418930:intron 40.0%
GACACCATCTGATCAAAGAT+CGG - chr3_2:66797993-66798012 Msa0418930:CDS 40.0%
TCATCCGATCTTTGATCAGA+TGG + chr3_2:66798000-66798019 None:intergenic 40.0%
! TGTTTTGTACAGGTAGTTGC+TGG - chr3_2:66798268-66798287 Msa0418930:CDS 40.0%
! GTTTTGTACAGGTAGTTGCT+GGG - chr3_2:66798269-66798288 Msa0418930:CDS 40.0%
TCAACTGTTGTAGCTGTTGA+AGG - chr3_2:66798297-66798316 Msa0418930:CDS 40.0%
GAAAATCAAGGATGCAATGG+TGG - chr3_2:66798390-66798409 Msa0418930:CDS 40.0%
TACCCTTACACAGCAAATGA+TGG - chr3_2:66798474-66798493 Msa0418930:intron 40.0%
!! GATCCATCATTTGCTGTGTA+AGG + chr3_2:66798480-66798499 None:intergenic 40.0%
GACCATCAATTGATACAGCT+GGG + chr3_2:66798621-66798640 None:intergenic 40.0%
TGACCATCAATTGATACAGC+TGG + chr3_2:66798622-66798641 None:intergenic 40.0%
! AAAGCATCTTCATCGTTAGC+CGG + chr3_2:66798655-66798674 None:intergenic 40.0%
AAACTGGAAATCAGATCCTC+CGG + chr3_2:66798722-66798741 None:intergenic 40.0%
! TGATTTCCAGTTTTACTCGG+AGG - chr3_2:66798729-66798748 Msa0418930:intron 40.0%
GGTGTAGCAATAGTAGGATA+TGG - chr3_2:66798948-66798967 Msa0418930:CDS 40.0%
ATTGGATTGTGAGGAACTCA+TGG - chr3_2:66798994-66799013 Msa0418930:CDS 40.0%
TTGGATTGTGAGGAACTCAT+GGG - chr3_2:66798995-66799014 Msa0418930:CDS 40.0%
TCTAACAAGGAAGGACTTTG+TGG - chr3_2:66799065-66799084 Msa0418930:CDS 40.0%
! TAAAGGTCCTGCTGGATTTT+TGG + chr3_2:66799129-66799148 None:intergenic 40.0%
AGGACCTTTATCATCTACCA+AGG - chr3_2:66799139-66799158 Msa0418930:CDS 40.0%
ATAATGGTTGCAGGGAATGA+GGG + chr3_2:66799380-66799399 None:intergenic 40.0%
GAATGGAAGTTGGATGGAAA+GGG + chr3_2:66797414-66797433 None:intergenic 40.0%
TGAATGGAAGTTGGATGGAA+AGG + chr3_2:66797415-66797434 None:intergenic 40.0%
GATTGTTCTGTCCATTGCTT+TGG - chr3_2:66797502-66797521 Msa0418930:exon 40.0%
ATCTTGGAAATCGAAGCTCT+CGG + chr3_2:66797540-66797559 None:intergenic 40.0%
CTGAGGACACATCTTTATCT+TGG + chr3_2:66797556-66797575 None:intergenic 40.0%
!! AGCGCTTTTGTTTCTCATCA+AGG + chr3_2:66797637-66797656 None:intergenic 40.0%
TGTCCACAACACCAACAAAA+TGG - chr3_2:66797685-66797704 Msa0418930:CDS 40.0%
GGTAGTCCTAAATTCATGGT+TGG + chr3_2:66797753-66797772 None:intergenic 40.0%
! GAATTTAGGACTACCTATGC+TGG - chr3_2:66797758-66797777 Msa0418930:CDS 40.0%
! TCTGTTGATTGGAGGAAGAA+AGG - chr3_2:66797869-66797888 Msa0418930:intron 40.0%
GACACCATCTGATCAAAGAT+CGG - chr3_2:66797993-66798012 Msa0418930:CDS 40.0%
TCATCCGATCTTTGATCAGA+TGG + chr3_2:66798000-66798019 None:intergenic 40.0%
! TGTTTTGTACAGGTAGTTGC+TGG - chr3_2:66798268-66798287 Msa0418930:CDS 40.0%
! GTTTTGTACAGGTAGTTGCT+GGG - chr3_2:66798269-66798288 Msa0418930:CDS 40.0%
TCAACTGTTGTAGCTGTTGA+AGG - chr3_2:66798297-66798316 Msa0418930:CDS 40.0%
GAAAATCAAGGATGCAATGG+TGG - chr3_2:66798390-66798409 Msa0418930:CDS 40.0%
TACCCTTACACAGCAAATGA+TGG - chr3_2:66798474-66798493 Msa0418930:intron 40.0%
!! GATCCATCATTTGCTGTGTA+AGG + chr3_2:66798480-66798499 None:intergenic 40.0%
GACCATCAATTGATACAGCT+GGG + chr3_2:66798621-66798640 None:intergenic 40.0%
TGACCATCAATTGATACAGC+TGG + chr3_2:66798622-66798641 None:intergenic 40.0%
! AAAGCATCTTCATCGTTAGC+CGG + chr3_2:66798655-66798674 None:intergenic 40.0%
AAACTGGAAATCAGATCCTC+CGG + chr3_2:66798722-66798741 None:intergenic 40.0%
! TGATTTCCAGTTTTACTCGG+AGG - chr3_2:66798729-66798748 Msa0418930:intron 40.0%
GGTGTAGCAATAGTAGGATA+TGG - chr3_2:66798948-66798967 Msa0418930:CDS 40.0%
ATTGGATTGTGAGGAACTCA+TGG - chr3_2:66798994-66799013 Msa0418930:CDS 40.0%
TTGGATTGTGAGGAACTCAT+GGG - chr3_2:66798995-66799014 Msa0418930:CDS 40.0%
TCTAACAAGGAAGGACTTTG+TGG - chr3_2:66799065-66799084 Msa0418930:CDS 40.0%
! TAAAGGTCCTGCTGGATTTT+TGG + chr3_2:66799129-66799148 None:intergenic 40.0%
AGGACCTTTATCATCTACCA+AGG - chr3_2:66799139-66799158 Msa0418930:CDS 40.0%
ATAATGGTTGCAGGGAATGA+GGG + chr3_2:66799380-66799399 None:intergenic 40.0%
GCAGGGGACTGTTTATATAG+AGG + chr3_2:66797386-66797405 None:intergenic 45.0%
TGTCCTCAGACAAAAGCTTG+TGG - chr3_2:66797567-66797586 Msa0418930:CDS 45.0%
GTCCTCAGACAAAAGCTTGT+GGG - chr3_2:66797568-66797587 Msa0418930:CDS 45.0%
TGTGGGACTTATACGAGAGA+TGG - chr3_2:66797585-66797604 Msa0418930:CDS 45.0%
GACTACCTATGCTGGATCAA+AGG - chr3_2:66797766-66797785 Msa0418930:intron 45.0%
AATCACCACAGAATGTTCCG+AGG - chr3_2:66797791-66797810 Msa0418930:intron 45.0%
ATGAATGTTCCACTTCCACG+TGG + chr3_2:66797821-66797840 None:intergenic 45.0%
ATCAACAGAAGCAGGAGCTT+TGG + chr3_2:66797858-66797877 None:intergenic 45.0%
AAGCTCCTGCTTCTGTTGAT+TGG - chr3_2:66797858-66797877 Msa0418930:intron 45.0%
TTCCTCCAATCAACAGAAGC+AGG + chr3_2:66797866-66797885 None:intergenic 45.0%
! CCACGAGTCCTTTAAGTTTC+AGG + chr3_2:66798050-66798069 None:intergenic 45.0%
CCTGAAACTTAAAGGACTCG+TGG - chr3_2:66798047-66798066 Msa0418930:CDS 45.0%
GTCCCAGCTGTATCAATTGA+TGG - chr3_2:66798616-66798635 Msa0418930:intron 45.0%
TGATGGTCATGAGACTGTTC+CGG - chr3_2:66798633-66798652 Msa0418930:intron 45.0%
! GGAGTATTTACTGGCGATTG+TGG - chr3_2:66798909-66798928 Msa0418930:CDS 45.0%
GGATATGGAACAACCGTTGA+TGG - chr3_2:66798963-66798982 Msa0418930:CDS 45.0%
TGGATTGTGAGGAACTCATG+GGG - chr3_2:66798996-66799015 Msa0418930:CDS 45.0%
AGGACTTTGTGGCATAGCTA+TGG - chr3_2:66799076-66799095 Msa0418930:CDS 45.0%
!! GGAGGAGTTTTTAACTGGGT+AGG + chr3_2:66799108-66799127 None:intergenic 45.0%
AACTCCTCCAAAAATCCAGC+AGG - chr3_2:66799119-66799138 Msa0418930:CDS 45.0%
GTAGATGATAAAGGTCCTGC+TGG + chr3_2:66799137-66799156 None:intergenic 45.0%
CATAATGGTTGCAGGGAATG+AGG + chr3_2:66799381-66799400 None:intergenic 45.0%
GCAGGGGACTGTTTATATAG+AGG + chr3_2:66797386-66797405 None:intergenic 45.0%
TGTCCTCAGACAAAAGCTTG+TGG - chr3_2:66797567-66797586 Msa0418930:CDS 45.0%
GTCCTCAGACAAAAGCTTGT+GGG - chr3_2:66797568-66797587 Msa0418930:CDS 45.0%
TGTGGGACTTATACGAGAGA+TGG - chr3_2:66797585-66797604 Msa0418930:CDS 45.0%
GACTACCTATGCTGGATCAA+AGG - chr3_2:66797766-66797785 Msa0418930:intron 45.0%
AATCACCACAGAATGTTCCG+AGG - chr3_2:66797791-66797810 Msa0418930:intron 45.0%
ATGAATGTTCCACTTCCACG+TGG + chr3_2:66797821-66797840 None:intergenic 45.0%
ATCAACAGAAGCAGGAGCTT+TGG + chr3_2:66797858-66797877 None:intergenic 45.0%
AAGCTCCTGCTTCTGTTGAT+TGG - chr3_2:66797858-66797877 Msa0418930:intron 45.0%
TTCCTCCAATCAACAGAAGC+AGG + chr3_2:66797866-66797885 None:intergenic 45.0%
! CCACGAGTCCTTTAAGTTTC+AGG + chr3_2:66798050-66798069 None:intergenic 45.0%
CCTGAAACTTAAAGGACTCG+TGG - chr3_2:66798047-66798066 Msa0418930:CDS 45.0%
GTCCCAGCTGTATCAATTGA+TGG - chr3_2:66798616-66798635 Msa0418930:intron 45.0%
TGATGGTCATGAGACTGTTC+CGG - chr3_2:66798633-66798652 Msa0418930:intron 45.0%
! GGAGTATTTACTGGCGATTG+TGG - chr3_2:66798909-66798928 Msa0418930:CDS 45.0%
GGATATGGAACAACCGTTGA+TGG - chr3_2:66798963-66798982 Msa0418930:CDS 45.0%
TGGATTGTGAGGAACTCATG+GGG - chr3_2:66798996-66799015 Msa0418930:CDS 45.0%
AGGACTTTGTGGCATAGCTA+TGG - chr3_2:66799076-66799095 Msa0418930:CDS 45.0%
!! GGAGGAGTTTTTAACTGGGT+AGG + chr3_2:66799108-66799127 None:intergenic 45.0%
AACTCCTCCAAAAATCCAGC+AGG - chr3_2:66799119-66799138 Msa0418930:CDS 45.0%
GTAGATGATAAAGGTCCTGC+TGG + chr3_2:66799137-66799156 None:intergenic 45.0%
CATAATGGTTGCAGGGAATG+AGG + chr3_2:66799381-66799400 None:intergenic 45.0%
!! AAAAATATAATATATAACTT+AGG + chr3_2:66798200-66798219 None:intergenic 5.0%
!! AAAAATATAATATATAACTT+AGG + chr3_2:66798200-66798219 None:intergenic 5.0%
GATGGAAAGGGAAAGAGCAG+GGG + chr3_2:66797402-66797421 None:intergenic 50.0%
GGATGGAAAGGGAAAGAGCA+GGG + chr3_2:66797403-66797422 None:intergenic 50.0%
TGGATGGAAAGGGAAAGAGC+AGG + chr3_2:66797404-66797423 None:intergenic 50.0%
! GTCCCACAAGCTTTTGTCTG+AGG + chr3_2:66797573-66797592 None:intergenic 50.0%
GGGACTTATACGAGAGATGG+AGG - chr3_2:66797588-66797607 Msa0418930:CDS 50.0%
! CTCCTGCTTCTGTTGATTGG+AGG - chr3_2:66797861-66797880 Msa0418930:intron 50.0%
!! GAAGAAAGGTGCTGTCACTG+AGG - chr3_2:66797883-66797902 Msa0418930:intron 50.0%
GTCACTGAGGTCAAGGATCA+AGG - chr3_2:66797896-66797915 Msa0418930:intron 50.0%
GTCAAGGATCAAGGCCAATG+TGG - chr3_2:66797905-66797924 Msa0418930:intron 50.0%
! CTGTTGACTGCGTGAATGCA+TGG + chr3_2:66797970-66797989 None:intergenic 50.0%
!! AGGATGCAATGGTGGGCTAA+TGG - chr3_2:66798398-66798417 Msa0418930:intron 50.0%
CTATGGCTACGGATACAGGT+TGG + chr3_2:66798696-66798715 None:intergenic 50.0%
GCATCTATGGCTACGGATAC+AGG + chr3_2:66798700-66798719 None:intergenic 50.0%
GTATCCGTAGCCATAGATGC+CGG - chr3_2:66798700-66798719 Msa0418930:intron 50.0%
ATCAGATCCTCCGGCATCTA+TGG + chr3_2:66798713-66798732 None:intergenic 50.0%
!! AGGTCCTGCTGGATTTTTGG+AGG + chr3_2:66799126-66799145 None:intergenic 50.0%
GATGGAAAGGGAAAGAGCAG+GGG + chr3_2:66797402-66797421 None:intergenic 50.0%
GGATGGAAAGGGAAAGAGCA+GGG + chr3_2:66797403-66797422 None:intergenic 50.0%
TGGATGGAAAGGGAAAGAGC+AGG + chr3_2:66797404-66797423 None:intergenic 50.0%
! GTCCCACAAGCTTTTGTCTG+AGG + chr3_2:66797573-66797592 None:intergenic 50.0%
GGGACTTATACGAGAGATGG+AGG - chr3_2:66797588-66797607 Msa0418930:CDS 50.0%
! CTCCTGCTTCTGTTGATTGG+AGG - chr3_2:66797861-66797880 Msa0418930:intron 50.0%
!! GAAGAAAGGTGCTGTCACTG+AGG - chr3_2:66797883-66797902 Msa0418930:intron 50.0%
GTCACTGAGGTCAAGGATCA+AGG - chr3_2:66797896-66797915 Msa0418930:intron 50.0%
GTCAAGGATCAAGGCCAATG+TGG - chr3_2:66797905-66797924 Msa0418930:intron 50.0%
! CTGTTGACTGCGTGAATGCA+TGG + chr3_2:66797970-66797989 None:intergenic 50.0%
!! AGGATGCAATGGTGGGCTAA+TGG - chr3_2:66798398-66798417 Msa0418930:intron 50.0%
CTATGGCTACGGATACAGGT+TGG + chr3_2:66798696-66798715 None:intergenic 50.0%
GCATCTATGGCTACGGATAC+AGG + chr3_2:66798700-66798719 None:intergenic 50.0%
GTATCCGTAGCCATAGATGC+CGG - chr3_2:66798700-66798719 Msa0418930:intron 50.0%
ATCAGATCCTCCGGCATCTA+TGG + chr3_2:66798713-66798732 None:intergenic 50.0%
!! AGGTCCTGCTGGATTTTTGG+AGG + chr3_2:66799126-66799145 None:intergenic 50.0%
GAGATGGAGGAGTCACCACA+CGG - chr3_2:66797601-66797620 Msa0418930:CDS 55.0%
GGAGTCACCACACGGTTTCT+CGG - chr3_2:66797609-66797628 Msa0418930:CDS 55.0%
CAAGGTTCCGAGAAACCGTG+TGG + chr3_2:66797619-66797638 None:intergenic 55.0%
! AGGTGCTGTCACTGAGGTCA+AGG - chr3_2:66797889-66797908 Msa0418930:intron 55.0%
!! GGCTACGGATACAGGTTGGT+TGG + chr3_2:66798692-66798711 None:intergenic 55.0%
TCCTCCGGCATCTATGGCTA+CGG + chr3_2:66798707-66798726 None:intergenic 55.0%
TGTGAGGAACTCATGGGGAG+CGG - chr3_2:66799001-66799020 Msa0418930:CDS 55.0%
GAACTCATGGGGAGCGGAAT+GGG - chr3_2:66799007-66799026 Msa0418930:CDS 55.0%
AACTCATGGGGAGCGGAATG+GGG - chr3_2:66799008-66799027 Msa0418930:CDS 55.0%
GAGATGGAGGAGTCACCACA+CGG - chr3_2:66797601-66797620 Msa0418930:CDS 55.0%
GGAGTCACCACACGGTTTCT+CGG - chr3_2:66797609-66797628 Msa0418930:CDS 55.0%
CAAGGTTCCGAGAAACCGTG+TGG + chr3_2:66797619-66797638 None:intergenic 55.0%
! AGGTGCTGTCACTGAGGTCA+AGG - chr3_2:66797889-66797908 Msa0418930:intron 55.0%
!! GGCTACGGATACAGGTTGGT+TGG + chr3_2:66798692-66798711 None:intergenic 55.0%
TCCTCCGGCATCTATGGCTA+CGG + chr3_2:66798707-66798726 None:intergenic 55.0%
TGTGAGGAACTCATGGGGAG+CGG - chr3_2:66799001-66799020 Msa0418930:CDS 55.0%
GAACTCATGGGGAGCGGAAT+GGG - chr3_2:66799007-66799026 Msa0418930:CDS 55.0%
AACTCATGGGGAGCGGAATG+GGG - chr3_2:66799008-66799027 Msa0418930:CDS 55.0%
GCGTGCCTCGGAACATTCTG+TGG + chr3_2:66797799-66797818 None:intergenic 60.0%
TCCGTAGCCATAGATGCCGG+AGG - chr3_2:66798703-66798722 Msa0418930:intron 60.0%
GGAACTCATGGGGAGCGGAA+TGG - chr3_2:66799006-66799025 Msa0418930:CDS 60.0%
GGAGCGGAATGGGGTGAACA+AGG - chr3_2:66799017-66799036 Msa0418930:CDS 60.0%
GCGTGCCTCGGAACATTCTG+TGG + chr3_2:66797799-66797818 None:intergenic 60.0%
TCCGTAGCCATAGATGCCGG+AGG - chr3_2:66798703-66798722 Msa0418930:intron 60.0%
GGAACTCATGGGGAGCGGAA+TGG - chr3_2:66799006-66799025 Msa0418930:CDS 60.0%
GGAGCGGAATGGGGTGAACA+AGG - chr3_2:66799017-66799036 Msa0418930:CDS 60.0%
ATGTTCCGAGGCACGCCACG+TGG - chr3_2:66797803-66797822 Msa0418930:intron 65.0%
CACTTCCACGTGGCGTGCCT+CGG + chr3_2:66797811-66797830 None:intergenic 65.0%
ATGTTCCGAGGCACGCCACG+TGG - chr3_2:66797803-66797822 Msa0418930:intron 65.0%
CACTTCCACGTGGCGTGCCT+CGG + chr3_2:66797811-66797830 None:intergenic 65.0%
CGAGGCACGCCACGTGGAAG+TGG - chr3_2:66797809-66797828 Msa0418930:intron 70.0%
CGAGGCACGCCACGTGGAAG+TGG - chr3_2:66797809-66797828 Msa0418930:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 66797252 66799438 66797252 ID=Msa0418930;Name=Msa0418930
chr3_2 mRNA 66797252 66799438 66797252 ID=Msa0418930-mRNA-1;Parent=Msa0418930;Name=Msa0418930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=227|1|1|1|1|1|4|266|362
chr3_2 exon 66797252 66797781 66797252 ID=Msa0418930-mRNA-1:exon:15430;Parent=Msa0418930-mRNA-1
chr3_2 exon 66797940 66798080 66797940 ID=Msa0418930-mRNA-1:exon:15429;Parent=Msa0418930-mRNA-1
chr3_2 exon 66798175 66798410 66798175 ID=Msa0418930-mRNA-1:exon:15428;Parent=Msa0418930-mRNA-1
chr3_2 exon 66798764 66799438 66798764 ID=Msa0418930-mRNA-1:exon:15427;Parent=Msa0418930-mRNA-1
chr3_2 five_prime_UTR 66799212 66799438 66799212 ID=Msa0418930-mRNA-1:five_prime_utr;Parent=Msa0418930-mRNA-1
chr3_2 CDS 66798764 66799211 66798764 ID=Msa0418930-mRNA-1:cds;Parent=Msa0418930-mRNA-1
chr3_2 CDS 66798175 66798410 66798175 ID=Msa0418930-mRNA-1:cds;Parent=Msa0418930-mRNA-1
chr3_2 CDS 66797940 66798080 66797940 ID=Msa0418930-mRNA-1:cds;Parent=Msa0418930-mRNA-1
chr3_2 CDS 66797518 66797781 66797518 ID=Msa0418930-mRNA-1:cds;Parent=Msa0418930-mRNA-1
chr3_2 three_prime_UTR 66797252 66797517 66797252 ID=Msa0418930-mRNA-1:three_prime_utr;Parent=Msa0418930-mRNA-1
Gene Sequence

>Msa0418930

ATGGAAACTAAGAATCTATTGTTGATTGTTCTGTCCATTGCTTTGGTTCTTGAAGTATCCGAGAGCTTCGATTTCCAAGATAAAGATGTGTCCTCAGACAAAAGCTTGTGGGACTTATACGAGAGATGGAGGAGTCACCACACGGTTTCTCGGAACCTTGATGAGAAACAAAAGCGCTTTAACGTGTTCAAAACAAACGTGATGCATGTCCACAACACCAACAAAATGGATAAGCCTTACAAGTTGAAACTTAACAAGTTTGCCGACATGACCAACCATGAATTTAGGACTACCTATGCTGGATCAAAGGTTAATCACCACAGAATGTTCCGAGGCACGCCACGTGGAAGTGGAACATTCATGTATGAGAATTTCACCAAAGCTCCTGCTTCTGTTGATTGGAGGAAGAAAGGTGCTGTCACTGAGGTCAAGGATCAAGGCCAATGTGGTAGTTGCTGGGCTTTTTCAACTGTTGTAGCTGTTGAAGGCATAAACCAAATAAAGACAGATAGGTTAGTGCCTTTGTCTGAACAAGAGCTTATAGATTGTGACAATCAAGAAAATCAAGGATGCAATGGTGGGCTAATGGAATATGCTTTTGAGTACATTAAGCAAAAAGGTGGCTTAACAACAGAAAGCTATTACCCTTACACAGCAAATGATGGATCATGTGATGCAACAAAAGAAAATGTCCCAGCTGTATCAATTGATGGTCATGAGACTGTTCCGGCTAACGATGAAGATGCTTTGCTCAAAGCTGTTGCCAACCAACCTGTATCCGTAGCCATAGATGCCGGAGGATCTGATTTCCAGTTTTACTCGGAGGGAGTATTTACTGGCGATTGTGGTAAAGAGCTAAATCATGGTGTAGCAATAGTAGGATATGGAACAACCGTTGATGGAACTAATTATTGGATTGTGAGGAACTCATGGGGAGCGGAATGGGGTGAACAAGGTTACATCAGAATGCAAAGGAATGTATCTAACAAGGAAGGACTTTGTGGCATAGCTATGGAAGCTTCCTACCCAGTTAAAAACTCCTCCAAAAATCCAGCAGGACCTTTATCATCTACCAAGGATGAGCTTTGA

Protein sequence

>Msa0418930

METKNLLLIVLSIALVLEVSESFDFQDKDVSSDKSLWDLYERWRSHHTVSRNLDEKQKRFNVFKTNVMHVHNTNKMDKPYKLKLNKFADMTNHEFRTTYAGSKVNHHRMFRGTPRGSGTFMYENFTKAPASVDWRKKGAVTEVKDQGQCGSCWAFSTVVAVEGINQIKTDRLVPLSEQELIDCDNQENQGCNGGLMEYAFEYIKQKGGLTTESYYPYTANDGSCDATKENVPAVSIDGHETVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCGKELNHGVAIVGYGTTVDGTNYWIVRNSWGAEWGEQGYIRMQRNVSNKEGLCGIAMEASYPVKNSSKNPAGPLSSTKDEL*