Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418930 | XP_013460973.1 | 96.409 | 362 | 13 | 0 | 1 | 362 | 1 | 362 | 0.0 | 737 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418930 | sp|P25803|CYSEP_PHAVU | 81.768 | 362 | 66 | 0 | 1 | 362 | 1 | 362 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418930 | G8A2F7 | 96.409 | 362 | 13 | 0 | 1 | 362 | 1 | 362 | 0.0 | 737 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0418930 | 0.804037 | 2.618509e-49 | -8.615850e-47 |
| Msa0081020 | Msa0418930 | 0.821583 | 3.738851e-53 | -8.615850e-47 |
| Msa0106710 | Msa0418930 | 0.806232 | 9.091703e-50 | -8.615850e-47 |
| Msa0208140 | Msa0418930 | 0.809864 | 1.532690e-50 | -8.615850e-47 |
| Msa0217670 | Msa0418930 | 0.802413 | 5.677979e-49 | -8.615850e-47 |
| Msa0225100 | Msa0418930 | 0.808516 | 2.980881e-50 | -8.615850e-47 |
| Msa0370770 | Msa0418930 | 0.879303 | 1.391419e-69 | -8.615850e-47 |
| Msa0418930 | Msa0450400 | -0.800089 | 1.697525e-48 | -8.615850e-47 |
| Msa0418930 | Msa0464810 | 0.872426 | 3.210786e-67 | -8.615850e-47 |
| Msa0418930 | Msa0664540 | 0.801195 | 1.009864e-48 | -8.615850e-47 |
| Msa0418930 | Msa0702720 | 0.808098 | 3.658626e-50 | -8.615850e-47 |
| Msa0418930 | Msa0829330 | 0.800007 | 1.763835e-48 | -8.615850e-47 |
| Msa0418930 | Msa0855870 | 0.822987 | 1.765115e-53 | -8.615850e-47 |
| Msa0418930 | Msa0869280 | 0.803476 | 3.423680e-49 | -8.615850e-47 |
| Msa0418930 | Msa0933760 | 0.819736 | 9.929126e-53 | -8.615850e-47 |
| Msa0418930 | Msa0967870 | 0.801508 | 8.713259e-49 | -8.615850e-47 |
| Msa0418930 | Msa0992510 | 0.816443 | 5.514774e-52 | -8.615850e-47 |
| Msa0418930 | Msa1226460 | 0.802361 | 5.818124e-49 | -8.615850e-47 |
| Msa0418930 | Msa1271130 | 0.813021 | 3.160171e-51 | -8.615850e-47 |
| Msa0418930 | Msa1285550 | 0.800257 | 1.569176e-48 | -8.615850e-47 |
| Msa0418930 | Msa1338370 | 0.823225 | 1.553223e-53 | -8.615850e-47 |
| Msa0418930 | Msa1341840 | 0.816859 | 4.450023e-52 | -8.615850e-47 |
| Msa0418930 | Msa1435360 | 0.901638 | 2.188924e-78 | -8.615850e-47 |
| Msa0418930 | Msa1458630 | 0.802615 | 5.158243e-49 | -8.615850e-47 |
| Msa0418930 | Msa1458680 | 0.815069 | 1.116512e-51 | -8.615850e-47 |
| Msa0244640 | Msa0418930 | 0.800537 | 1.376054e-48 | -8.615850e-47 |
| Msa0263920 | Msa0418930 | 0.879942 | 8.248349e-70 | -8.615850e-47 |
| Msa0266180 | Msa0418930 | 0.816428 | 5.558568e-52 | -8.615850e-47 |
| Msa0283330 | Msa0418930 | 0.800590 | 1.342121e-48 | -8.615850e-47 |
| Msa0287740 | Msa0418930 | 0.813855 | 2.072474e-51 | -8.615850e-47 |
| Msa0287870 | Msa0418930 | 0.814598 | 1.420004e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418930 | MtrunA17_Chr3g0116551 | 96.409 | 362 | 13 | 0 | 1 | 362 | 1 | 362 | 0.0 | 737 |
| Msa0418930 | MtrunA17_Chr4g0058081 | 76.243 | 362 | 84 | 2 | 1 | 362 | 1 | 360 | 0.0 | 592 |
| Msa0418930 | MtrunA17_Chr4g0041481 | 57.692 | 312 | 121 | 7 | 35 | 343 | 35 | 338 | 4.49e-125 | 363 |
| Msa0418930 | MtrunA17_Chr4g0041521 | 57.051 | 312 | 123 | 7 | 35 | 343 | 35 | 338 | 1.46e-124 | 362 |
| Msa0418930 | MtrunA17_Chr4g0041061 | 52.586 | 348 | 155 | 7 | 1 | 343 | 1 | 343 | 1.95e-124 | 362 |
| Msa0418930 | MtrunA17_Chr5g0405751 | 55.660 | 318 | 127 | 6 | 33 | 343 | 32 | 342 | 4.91e-124 | 360 |
| Msa0418930 | MtrunA17_Chr4g0024411 | 57.962 | 314 | 121 | 7 | 38 | 344 | 33 | 342 | 1.14e-123 | 360 |
| Msa0418930 | MtrunA17_Chr4g0040881 | 55.312 | 320 | 134 | 6 | 28 | 343 | 29 | 343 | 1.51e-123 | 359 |
| Msa0418930 | MtrunA17_Chr4g0060251 | 50.568 | 352 | 156 | 7 | 1 | 343 | 1 | 343 | 2.91e-123 | 358 |
| Msa0418930 | MtrunA17_Chr1g0208261 | 55.215 | 326 | 141 | 5 | 23 | 345 | 73 | 396 | 8.66e-122 | 361 |
| Msa0418930 | MtrunA17_Chr4g0041081 | 53.395 | 324 | 134 | 6 | 28 | 343 | 29 | 343 | 9.84e-122 | 355 |
| Msa0418930 | MtrunA17_Chr3g0144281 | 51.884 | 345 | 155 | 5 | 7 | 345 | 9 | 348 | 1.18e-121 | 355 |
| Msa0418930 | MtrunA17_Chr4g0053311 | 51.320 | 341 | 151 | 5 | 8 | 345 | 14 | 342 | 1.72e-121 | 355 |
| Msa0418930 | MtrunA17_Chr3g0134231 | 51.989 | 352 | 156 | 8 | 6 | 345 | 12 | 362 | 2.74e-120 | 355 |
| Msa0418930 | MtrunA17_Chr2g0315491 | 54.227 | 343 | 142 | 7 | 6 | 343 | 7 | 339 | 8.07e-119 | 347 |
| Msa0418930 | MtrunA17_Chr4g0040851 | 50.585 | 342 | 157 | 6 | 6 | 344 | 27 | 359 | 6.74e-117 | 343 |
| Msa0418930 | MtrunA17_Chr2g0325121 | 49.138 | 348 | 165 | 5 | 1 | 346 | 1 | 338 | 5.36e-115 | 337 |
| Msa0418930 | MtrunA17_Chr4g0041471 | 51.792 | 307 | 144 | 3 | 40 | 344 | 37 | 341 | 5.56e-113 | 332 |
| Msa0418930 | MtrunA17_Chr1g0153011 | 50.143 | 349 | 146 | 8 | 6 | 346 | 16 | 344 | 4.27e-110 | 329 |
| Msa0418930 | MtrunA17_Chr2g0319991 | 46.313 | 339 | 171 | 5 | 10 | 344 | 12 | 343 | 1.88e-105 | 313 |
| Msa0418930 | MtrunA17_Chr7g0248391 | 46.483 | 327 | 158 | 7 | 25 | 347 | 27 | 340 | 1.17e-99 | 298 |
| Msa0418930 | MtrunA17_Chr7g0248811 | 45.588 | 340 | 170 | 7 | 7 | 343 | 7 | 334 | 5.51e-98 | 294 |
| Msa0418930 | MtrunA17_Chr3g0142071 | 48.875 | 311 | 156 | 3 | 39 | 347 | 49 | 358 | 6.43e-98 | 298 |
| Msa0418930 | MtrunA17_Chr2g0283901 | 43.636 | 330 | 168 | 11 | 25 | 345 | 36 | 356 | 6.97e-83 | 260 |
| Msa0418930 | MtrunA17_Chr8g0379151 | 43.380 | 355 | 175 | 13 | 6 | 345 | 30 | 373 | 3.88e-76 | 239 |
| Msa0418930 | MtrunA17_Chr0c27g0493921 | 44.295 | 298 | 146 | 9 | 53 | 344 | 65 | 348 | 1.83e-73 | 231 |
| Msa0418930 | MtrunA17_Chr2g0283741 | 39.826 | 344 | 187 | 12 | 27 | 361 | 41 | 373 | 5.92e-73 | 231 |
| Msa0418930 | MtrunA17_Chr4g0070441 | 44.251 | 287 | 142 | 9 | 53 | 331 | 65 | 341 | 1.76e-69 | 221 |
| Msa0418930 | MtrunA17_Chr2g0283671 | 51.389 | 216 | 102 | 3 | 129 | 344 | 15 | 227 | 1.15e-68 | 215 |
| Msa0418930 | MtrunA17_Chr2g0311381 | 40.303 | 330 | 155 | 16 | 40 | 343 | 36 | 349 | 6.97e-64 | 207 |
| Msa0418930 | MtrunA17_Chr2g0311471 | 41.860 | 301 | 158 | 11 | 55 | 344 | 52 | 346 | 2.31e-62 | 203 |
| Msa0418930 | MtrunA17_Chr1g0155781 | 39.799 | 299 | 152 | 9 | 54 | 336 | 66 | 352 | 7.37e-62 | 202 |
| Msa0418930 | MtrunA17_Chr4g0035551 | 37.793 | 299 | 157 | 8 | 54 | 336 | 63 | 348 | 1.01e-58 | 194 |
| Msa0418930 | MtrunA17_Chr2g0311391 | 35.696 | 381 | 189 | 15 | 4 | 342 | 2 | 368 | 1.72e-57 | 191 |
| Msa0418930 | MtrunA17_Chr1g0156161 | 42.731 | 227 | 122 | 6 | 119 | 342 | 40 | 261 | 2.20e-56 | 185 |
| Msa0418930 | MtrunA17_Chr1g0199131 | 32.258 | 341 | 196 | 10 | 15 | 336 | 34 | 358 | 1.23e-52 | 179 |
| Msa0418930 | MtrunA17_Chr7g0248421 | 52.229 | 157 | 70 | 3 | 152 | 307 | 57 | 209 | 3.13e-44 | 151 |
| Msa0418930 | MtrunA17_Chr4g0036731 | 31.805 | 349 | 188 | 9 | 1 | 336 | 1 | 312 | 5.58e-44 | 154 |
| Msa0418930 | MtrunA17_Chr2g0283661 | 31.429 | 315 | 144 | 8 | 32 | 343 | 25 | 270 | 8.23e-44 | 152 |
| Msa0418930 | MtrunA17_Chr7g0248371 | 64.646 | 99 | 34 | 1 | 246 | 344 | 34 | 131 | 6.52e-43 | 146 |
| Msa0418930 | MtrunA17_Chr2g0283751 | 36.082 | 291 | 150 | 13 | 6 | 274 | 10 | 286 | 6.12e-42 | 148 |
| Msa0418930 | MtrunA17_Chr4g0036281 | 34.021 | 291 | 147 | 9 | 54 | 336 | 63 | 316 | 5.69e-41 | 146 |
| Msa0418930 | MtrunA17_Chr4g0037291 | 34.021 | 291 | 147 | 9 | 54 | 336 | 104 | 357 | 7.43e-41 | 147 |
| Msa0418930 | MtrunA17_Chr7g0248661 | 65.333 | 75 | 26 | 0 | 270 | 344 | 2 | 76 | 1.97e-32 | 116 |
| Msa0418930 | MtrunA17_Chr2g0311091 | 39.259 | 135 | 71 | 2 | 55 | 178 | 50 | 184 | 8.71e-25 | 99.8 |
| Msa0418930 | MtrunA17_Chr7g0271041 | 27.536 | 276 | 164 | 11 | 86 | 336 | 66 | 330 | 3.81e-24 | 101 |
| Msa0418930 | MtrunA17_Chr1g0156771 | 47.525 | 101 | 49 | 3 | 127 | 224 | 54 | 153 | 1.92e-23 | 95.1 |
| Msa0418930 | MtrunA17_Chr7g0271031 | 30.738 | 244 | 137 | 10 | 130 | 350 | 153 | 387 | 3.51e-23 | 99.8 |
| Msa0418930 | MtrunA17_Chr8g0379671 | 39.231 | 130 | 68 | 5 | 169 | 296 | 23 | 143 | 2.41e-16 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418930 | AT5G50260.1 | 70.833 | 360 | 104 | 1 | 4 | 362 | 2 | 361 | 0.0 | 556 |
| Msa0418930 | AT3G48340.1 | 66.759 | 361 | 117 | 2 | 4 | 362 | 2 | 361 | 0.0 | 514 |
| Msa0418930 | AT3G48350.1 | 63.611 | 360 | 129 | 2 | 4 | 362 | 2 | 360 | 3.10e-176 | 494 |
| Msa0418930 | AT3G48350.2 | 63.406 | 276 | 100 | 1 | 4 | 278 | 2 | 277 | 6.72e-133 | 382 |
| Msa0418930 | AT4G35350.1 | 51.862 | 349 | 158 | 4 | 3 | 345 | 9 | 353 | 1.93e-122 | 357 |
| Msa0418930 | AT1G20850.1 | 54.658 | 322 | 142 | 3 | 25 | 345 | 36 | 354 | 3.96e-122 | 357 |
| Msa0418930 | AT1G47128.1 | 48.991 | 347 | 166 | 4 | 6 | 346 | 13 | 354 | 2.07e-117 | 348 |
| Msa0418930 | AT5G43060.1 | 50.286 | 350 | 158 | 5 | 6 | 345 | 11 | 354 | 2.68e-117 | 348 |
| Msa0418930 | AT3G19390.1 | 48.159 | 353 | 174 | 6 | 1 | 350 | 5 | 351 | 1.22e-115 | 343 |
| Msa0418930 | AT5G45890.1 | 47.714 | 350 | 165 | 7 | 6 | 343 | 1 | 344 | 2.82e-115 | 338 |
| Msa0418930 | AT4G36880.1 | 51.368 | 329 | 149 | 6 | 32 | 351 | 41 | 367 | 8.14e-114 | 336 |
| Msa0418930 | AT1G06260.1 | 48.571 | 350 | 164 | 7 | 1 | 345 | 5 | 343 | 1.48e-107 | 319 |
| Msa0418930 | AT3G19400.1 | 51.592 | 314 | 142 | 7 | 39 | 347 | 43 | 351 | 1.50e-107 | 320 |
| Msa0418930 | AT4G11310.1 | 46.797 | 359 | 170 | 8 | 3 | 347 | 4 | 355 | 1.41e-105 | 315 |
| Msa0418930 | AT4G11320.2 | 46.499 | 357 | 169 | 8 | 6 | 347 | 13 | 362 | 3.07e-103 | 309 |
| Msa0418930 | AT4G11320.1 | 46.499 | 357 | 169 | 8 | 6 | 347 | 13 | 362 | 3.07e-103 | 309 |
| Msa0418930 | AT2G27420.1 | 45.533 | 347 | 174 | 5 | 6 | 344 | 8 | 347 | 4.13e-99 | 298 |
| Msa0418930 | AT4G23520.1 | 46.835 | 316 | 158 | 6 | 39 | 350 | 46 | 355 | 1.04e-98 | 297 |
| Msa0418930 | AT1G09850.1 | 48.710 | 310 | 152 | 4 | 38 | 345 | 30 | 334 | 1.31e-98 | 299 |
| Msa0418930 | AT3G49340.1 | 44.118 | 340 | 183 | 5 | 9 | 344 | 4 | 340 | 1.79e-97 | 293 |
| Msa0418930 | AT2G34080.1 | 44.348 | 345 | 181 | 6 | 6 | 344 | 5 | 344 | 4.53e-94 | 285 |
| Msa0418930 | AT1G29090.1 | 44.444 | 360 | 169 | 11 | 1 | 344 | 10 | 354 | 2.43e-90 | 275 |
| Msa0418930 | AT4G35350.2 | 49.645 | 282 | 132 | 4 | 3 | 278 | 9 | 286 | 5.32e-88 | 267 |
| Msa0418930 | AT3G43960.1 | 45.538 | 325 | 161 | 11 | 39 | 354 | 40 | 357 | 5.78e-88 | 270 |
| Msa0418930 | AT1G29080.1 | 41.311 | 351 | 193 | 8 | 1 | 344 | 1 | 345 | 1.47e-87 | 268 |
| Msa0418930 | AT1G29110.1 | 41.693 | 319 | 165 | 7 | 32 | 344 | 30 | 333 | 1.75e-78 | 244 |
| Msa0418930 | AT3G19400.2 | 50.000 | 240 | 111 | 6 | 39 | 273 | 43 | 278 | 6.31e-72 | 226 |
| Msa0418930 | AT5G60360.1 | 42.333 | 300 | 153 | 9 | 51 | 344 | 71 | 356 | 5.33e-70 | 223 |
| Msa0418930 | AT3G45310.1 | 41.391 | 302 | 153 | 10 | 51 | 344 | 71 | 356 | 1.36e-67 | 217 |
| Msa0418930 | AT5G60360.2 | 42.000 | 300 | 153 | 10 | 51 | 344 | 71 | 355 | 1.83e-67 | 217 |
| Msa0418930 | AT3G45310.2 | 41.060 | 302 | 153 | 11 | 51 | 344 | 71 | 355 | 4.63e-65 | 211 |
| Msa0418930 | AT5G60360.3 | 42.143 | 280 | 146 | 8 | 51 | 324 | 71 | 340 | 7.94e-65 | 210 |
| Msa0418930 | AT2G21430.1 | 34.091 | 352 | 198 | 10 | 5 | 336 | 12 | 349 | 4.66e-61 | 200 |
| Msa0418930 | AT4G39090.1 | 37.458 | 299 | 159 | 8 | 54 | 336 | 66 | 352 | 1.25e-57 | 191 |
| Msa0418930 | AT3G54940.2 | 38.127 | 299 | 159 | 9 | 54 | 336 | 66 | 354 | 2.69e-55 | 185 |
| Msa0418930 | AT4G16190.1 | 37.919 | 298 | 159 | 9 | 55 | 336 | 71 | 358 | 9.55e-54 | 181 |
| Msa0418930 | AT3G54940.3 | 38.140 | 215 | 121 | 4 | 54 | 260 | 66 | 276 | 4.20e-39 | 140 |
| Msa0418930 | AT1G02305.1 | 27.596 | 337 | 209 | 11 | 50 | 362 | 33 | 358 | 1.11e-26 | 109 |
| Msa0418930 | AT4G01610.1 | 29.352 | 293 | 166 | 13 | 85 | 350 | 65 | 343 | 3.32e-23 | 99.8 |
| Msa0418930 | AT4G01610.2 | 28.669 | 293 | 168 | 13 | 85 | 350 | 65 | 343 | 3.09e-21 | 94.0 |
| Msa0418930 | AT2G22160.1 | 46.465 | 99 | 49 | 1 | 53 | 151 | 8 | 102 | 9.71e-21 | 86.7 |
| Msa0418930 | AT1G02300.1 | 31.381 | 239 | 132 | 10 | 147 | 362 | 146 | 375 | 3.20e-20 | 91.3 |
Find 114 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAACCTATCTGTCTTTATT+TGG | 0.189761 | 3_2:+66798342 | None:intergenic |
| CCGTTGATGGAACTAATTAT+TGG | 0.225728 | 3_2:-66797692 | Msa0418930:CDS |
| TTTGAGTACATTAAGCAAAA+AGG | 0.295259 | 3_2:-66798239 | Msa0418930:CDS |
| ATCAGATCCTCCGGCATCTA+TGG | 0.300046 | 3_2:+66797958 | None:intergenic |
| AGTTTCCATGTTTCTTTGTT+TGG | 0.301765 | 3_2:+66799203 | None:intergenic |
| TTGGAAGCAATTCACTTGTT+TGG | 0.302311 | 3_2:+66799222 | None:intergenic |
| ACATGACCAACCATGAATTT+AGG | 0.309976 | 3_2:-66798924 | Msa0418930:CDS |
| TTTGATGACAATGTATGATT+TGG | 0.320379 | 3_2:-66797389 | Msa0418930:three_prime_UTR |
| TGTCCACAACACCAACAAAA+TGG | 0.326241 | 3_2:-66798983 | Msa0418930:CDS |
| GAACTCATGGGGAGCGGAAT+GGG | 0.328427 | 3_2:-66797661 | Msa0418930:CDS |
| ATGTTTGTGTTGTTCAAGTA+TGG | 0.330691 | 3_2:+66799403 | None:intergenic |
| CTGAGGACACATCTTTATCT+TGG | 0.332566 | 3_2:+66799115 | None:intergenic |
| AAGCTCCTGCTTCTGTTGAT+TGG | 0.348923 | 3_2:-66798810 | Msa0418930:CDS |
| TCAAATATTTAAAGTTCATA+AGG | 0.354352 | 3_2:+66797420 | None:intergenic |
| CTATTACAGGGAGTATTTAC+TGG | 0.367645 | 3_2:-66797768 | Msa0418930:intron |
| AATGATGGAGATGATAAAAT+AGG | 0.371330 | 3_2:+66799378 | None:intergenic |
| GCATCTATGGCTACGGATAC+AGG | 0.385812 | 3_2:+66797971 | None:intergenic |
| TCAACTGTTGTAGCTGTTGA+AGG | 0.388321 | 3_2:-66798371 | Msa0418930:CDS |
| TTGTTAAGTTTCAACTTGTA+AGG | 0.389898 | 3_2:+66798955 | None:intergenic |
| AGGAGGTTAAAGGTTTCTTA+AGG | 0.390380 | 3_2:+66799340 | None:intergenic |
| AGGATGCAATGGTGGGCTAA+TGG | 0.392108 | 3_2:-66798270 | Msa0418930:CDS |
| GATCCATCATTTGCTGTGTA+AGG | 0.397020 | 3_2:+66798191 | None:intergenic |
| GTCCCAGCTGTATCAATTGA+TGG | 0.409945 | 3_2:-66798052 | Msa0418930:CDS |
| CACTTCCACGTGGCGTGCCT+CGG | 0.411657 | 3_2:+66798860 | None:intergenic |
| GATTGTTCTGTCCATTGCTT+TGG | 0.412192 | 3_2:-66799166 | Msa0418930:CDS |
| AACATTCATTCAAATATCAA+TGG | 0.413261 | 3_2:-66797261 | Msa0418930:three_prime_UTR |
| GGAGGTTAAAGGTTTCTTAA+GGG | 0.416407 | 3_2:+66799341 | None:intergenic |
| ATCAACAGAAGCAGGAGCTT+TGG | 0.419799 | 3_2:+66798813 | None:intergenic |
| TGTATTAATTGAATGGAAGT+TGG | 0.428819 | 3_2:+66799247 | None:intergenic |
| TGACCATCAATTGATACAGC+TGG | 0.435646 | 3_2:+66798049 | None:intergenic |
| GGTGTAGCAATAGTAGGATA+TGG | 0.443941 | 3_2:-66797720 | Msa0418930:CDS |
| TGATGGTCATGAGACTGTTC+CGG | 0.449890 | 3_2:-66798035 | Msa0418930:CDS |
| GGAGTCACCACACGGTTTCT+CGG | 0.450148 | 3_2:-66799059 | Msa0418930:CDS |
| GCAGGGGACTGTTTATATAG+AGG | 0.454291 | 3_2:+66799285 | None:intergenic |
| TTTGGAATGTATTAATTGAA+TGG | 0.454640 | 3_2:+66799240 | None:intergenic |
| GGATATGGAACAACCGTTGA+TGG | 0.454887 | 3_2:-66797705 | Msa0418930:CDS |
| CGAGGCACGCCACGTGGAAG+TGG | 0.460548 | 3_2:-66798859 | Msa0418930:CDS |
| TCATCCTTGGTAGATGATAA+AGG | 0.462977 | 3_2:+66797525 | None:intergenic |
| TAAACCAAATAAAGACAGAT+AGG | 0.464117 | 3_2:-66798346 | Msa0418930:CDS |
| TTCCTCCAATCAACAGAAGC+AGG | 0.475830 | 3_2:+66798805 | None:intergenic |
| CATAGGTAGTCCTAAATTCA+TGG | 0.476124 | 3_2:+66798914 | None:intergenic |
| CTCCTGCTTCTGTTGATTGG+AGG | 0.481655 | 3_2:-66798807 | Msa0418930:CDS |
| CATAATGGTTGCAGGGAATG+AGG | 0.484219 | 3_2:+66797290 | None:intergenic |
| ATTGGATTGTGAGGAACTCA+TGG | 0.493389 | 3_2:-66797674 | Msa0418930:CDS |
| GGACTGTTTATATAGAGGAT+TGG | 0.494115 | 3_2:+66799290 | None:intergenic |
| AATCATGGTGTAGCAATAGT+AGG | 0.495226 | 3_2:-66797726 | Msa0418930:CDS |
| GTCACTGAGGTCAAGGATCA+AGG | 0.495703 | 3_2:-66798772 | Msa0418930:CDS |
| TCTAACAAGGAAGGACTTTG+TGG | 0.498260 | 3_2:-66797603 | Msa0418930:CDS |
| GAGGTTAAAGGTTTCTTAAG+GGG | 0.504781 | 3_2:+66799342 | None:intergenic |
| GTAGATGATAAAGGTCCTGC+TGG | 0.507201 | 3_2:+66797534 | None:intergenic |
| AAACATTCAAAGCTCATCCT+TGG | 0.508057 | 3_2:+66797512 | None:intergenic |
| TGGATGGAAAGGGAAAGAGC+AGG | 0.508669 | 3_2:+66799267 | None:intergenic |
| TGAATGGAAGTTGGATGGAA+AGG | 0.510016 | 3_2:+66799256 | None:intergenic |
| TACCCTTACACAGCAAATGA+TGG | 0.512248 | 3_2:-66798194 | Msa0418930:CDS |
| GAATGGAAGTTGGATGGAAA+GGG | 0.512638 | 3_2:+66799257 | None:intergenic |
| GAATTTAGGACTACCTATGC+TGG | 0.513702 | 3_2:-66798910 | Msa0418930:CDS |
| GTCCTCAGACAAAAGCTTGT+GGG | 0.513806 | 3_2:-66799100 | Msa0418930:CDS |
| TTATATAGAGGATTGGAGAA+AGG | 0.514545 | 3_2:+66799297 | None:intergenic |
| GGATGAACAATGTATAATGA+TGG | 0.515697 | 3_2:+66799363 | None:intergenic |
| GGAACTCATGGGGAGCGGAA+TGG | 0.524402 | 3_2:-66797662 | Msa0418930:CDS |
| AGGACTTTGTGGCATAGCTA+TGG | 0.526821 | 3_2:-66797592 | Msa0418930:CDS |
| TGTGACAATCAAGAAAATCA+AGG | 0.527505 | 3_2:-66798290 | Msa0418930:CDS |
| GAAAATCAAGGATGCAATGG+TGG | 0.535112 | 3_2:-66798278 | Msa0418930:CDS |
| TCCTCCGGCATCTATGGCTA+CGG | 0.543132 | 3_2:+66797964 | None:intergenic |
| TTAATTGAATGGAAGTTGGA+TGG | 0.545409 | 3_2:+66799251 | None:intergenic |
| GACTACCTATGCTGGATCAA+AGG | 0.546319 | 3_2:-66798902 | Msa0418930:CDS |
| CAAGAAAATCAAGGATGCAA+TGG | 0.548537 | 3_2:-66798281 | Msa0418930:CDS |
| AAACTGGAAATCAGATCCTC+CGG | 0.552551 | 3_2:+66797949 | None:intergenic |
| TCTGTTGATTGGAGGAAGAA+AGG | 0.553167 | 3_2:-66798799 | Msa0418930:CDS |
| GGCTACGGATACAGGTTGGT+TGG | 0.553342 | 3_2:+66797979 | None:intergenic |
| GGATGGAAAGGGAAAGAGCA+GGG | 0.554487 | 3_2:+66799268 | None:intergenic |
| TTTAAGACATAATGGTTGCA+GGG | 0.557691 | 3_2:+66797283 | None:intergenic |
| AGGTGCTGTCACTGAGGTCA+AGG | 0.558185 | 3_2:-66798779 | Msa0418930:CDS |
| ATAATGGTTGCAGGGAATGA+GGG | 0.560027 | 3_2:+66797291 | None:intergenic |
| ATCCATCATTTGCTGTGTAA+GGG | 0.560080 | 3_2:+66798192 | None:intergenic |
| TGTGGTAAAGAGCTAAATCA+TGG | 0.564153 | 3_2:-66797741 | Msa0418930:CDS |
| TTGTTCAAGTATGGAAGCAA+AGG | 0.571573 | 3_2:+66799412 | None:intergenic |
| CCAATAATTAGTTCCATCAA+CGG | 0.573198 | 3_2:+66797692 | None:intergenic |
| TGTGGGACTTATACGAGAGA+TGG | 0.573304 | 3_2:-66799083 | Msa0418930:CDS |
| TTGGATTGTGAGGAACTCAT+GGG | 0.574375 | 3_2:-66797673 | Msa0418930:CDS |
| AACTCATGGGGAGCGGAATG+GGG | 0.577276 | 3_2:-66797660 | Msa0418930:CDS |
| GACCATCAATTGATACAGCT+GGG | 0.584179 | 3_2:+66798050 | None:intergenic |
| AAAGCATCTTCATCGTTAGC+CGG | 0.584931 | 3_2:+66798016 | None:intergenic |
| AAATTCATGGTTGGTCATGT+CGG | 0.587621 | 3_2:+66798927 | None:intergenic |
| GGAGCGGAATGGGGTGAACA+AGG | 0.588520 | 3_2:-66797651 | Msa0418930:CDS |
| ATTAACCTTTGATCCAGCAT+AGG | 0.590030 | 3_2:+66798897 | None:intergenic |
| GGAGTATTTACTGGCGATTG+TGG | 0.593617 | 3_2:-66797759 | Msa0418930:CDS |
| ATCTTGGAAATCGAAGCTCT+CGG | 0.596119 | 3_2:+66799131 | None:intergenic |
| TACTTCAAGAACCAAAGCAA+TGG | 0.600914 | 3_2:+66799155 | None:intergenic |
| TGTGAGGAACTCATGGGGAG+CGG | 0.601438 | 3_2:-66797667 | Msa0418930:CDS |
| TGTCCTCAGACAAAAGCTTG+TGG | 0.605870 | 3_2:-66799101 | Msa0418930:CDS |
| ATGTTCCGAGGCACGCCACG+TGG | 0.610728 | 3_2:-66798865 | Msa0418930:CDS |
| GCGTGCCTCGGAACATTCTG+TGG | 0.611727 | 3_2:+66798872 | None:intergenic |
| AGGAATGTATCTAACAAGGA+AGG | 0.612463 | 3_2:-66797612 | Msa0418930:CDS |
| GAACTAATTATTGGATTGTG+AGG | 0.613342 | 3_2:-66797683 | Msa0418930:CDS |
| GGTAGTCCTAAATTCATGGT+TGG | 0.613532 | 3_2:+66798918 | None:intergenic |
| TGCTTCCAAACAAAGAAACA+TGG | 0.616974 | 3_2:-66799208 | Msa0418930:exon |
| AAAATCAAGGATGCAATGGT+GGG | 0.617377 | 3_2:-66798277 | Msa0418930:CDS |
| ATAAGCTCTTGTTCAGACAA+AGG | 0.634536 | 3_2:+66798317 | None:intergenic |
| AAGGTTACATCAGAATGCAA+AGG | 0.641547 | 3_2:-66797632 | Msa0418930:CDS |
| GCAAAGGAATGTATCTAACA+AGG | 0.642601 | 3_2:-66797616 | Msa0418930:CDS |
| CTATGGCTACGGATACAGGT+TGG | 0.643007 | 3_2:+66797975 | None:intergenic |
| GATGGAAAGGGAAAGAGCAG+GGG | 0.645005 | 3_2:+66799269 | None:intergenic |
| GGGACTTATACGAGAGATGG+AGG | 0.652822 | 3_2:-66799080 | Msa0418930:CDS |
| GTATCCGTAGCCATAGATGC+CGG | 0.655334 | 3_2:-66797968 | Msa0418930:CDS |
| AGGACCTTTATCATCTACCA+AGG | 0.670444 | 3_2:-66797529 | Msa0418930:CDS |
| AATCACCACAGAATGTTCCG+AGG | 0.693791 | 3_2:-66798877 | Msa0418930:CDS |
| TCCGTAGCCATAGATGCCGG+AGG | 0.697215 | 3_2:-66797965 | Msa0418930:CDS |
| GTCAAGGATCAAGGCCAATG+TGG | 0.699707 | 3_2:-66798763 | Msa0418930:intron |
| GAGATGGAGGAGTCACCACA+CGG | 0.702988 | 3_2:-66799067 | Msa0418930:CDS |
| TGGATTGTGAGGAACTCATG+GGG | 0.709984 | 3_2:-66797672 | Msa0418930:CDS |
| CAAGGTTCCGAGAAACCGTG+TGG | 0.716333 | 3_2:+66799052 | None:intergenic |
| GAAGAAAGGTGCTGTCACTG+AGG | 0.722701 | 3_2:-66798785 | Msa0418930:CDS |
| ATGAATGTTCCACTTCCACG+TGG | 0.756623 | 3_2:+66798850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTACTTTTTTATTTTGA+AGG | + | chr3_2:66798808-66798827 | None:intergenic | 10.0% |
| !!! | TTTTTACTTTTTTATTTTGA+AGG | + | chr3_2:66798808-66798827 | None:intergenic | 10.0% |
| !! | AGTGAATTGAATTTATAAAT+AGG | + | chr3_2:66798083-66798102 | None:intergenic | 15.0% |
| !! | TAGTATAACTATTTGAAAAT+AGG | + | chr3_2:66798147-66798166 | None:intergenic | 15.0% |
| !! | TAAAAAAGTAAAAAAAGAGA+TGG | - | chr3_2:66798814-66798833 | Msa0418930:CDS | 15.0% |
| !!! | TCAAATATTTAAAGTTCATA+AGG | + | chr3_2:66799251-66799270 | None:intergenic | 15.0% |
| !! | AGTGAATTGAATTTATAAAT+AGG | + | chr3_2:66798083-66798102 | None:intergenic | 15.0% |
| !! | TAGTATAACTATTTGAAAAT+AGG | + | chr3_2:66798147-66798166 | None:intergenic | 15.0% |
| !! | TAAAAAAGTAAAAAAAGAGA+TGG | - | chr3_2:66798814-66798833 | Msa0418930:CDS | 15.0% |
| !!! | TCAAATATTTAAAGTTCATA+AGG | + | chr3_2:66799251-66799270 | None:intergenic | 15.0% |
| !! | AAACTCAATAAAAAAATGTG+AGG | + | chr3_2:66797351-66797370 | None:intergenic | 20.0% |
| !!! | TTTGGAATGTATTAATTGAA+TGG | + | chr3_2:66797431-66797450 | None:intergenic | 20.0% |
| !!! | ATGAACAATTTTTGAATCTT+AGG | + | chr3_2:66798583-66798602 | None:intergenic | 20.0% |
| !!! | ATGAATGTTTTAAGACATAA+TGG | + | chr3_2:66799396-66799415 | None:intergenic | 20.0% |
| !! | AACATTCATTCAAATATCAA+TGG | - | chr3_2:66799407-66799426 | Msa0418930:five_prime_UTR | 20.0% |
| !! | AAACTCAATAAAAAAATGTG+AGG | + | chr3_2:66797351-66797370 | None:intergenic | 20.0% |
| !!! | TTTGGAATGTATTAATTGAA+TGG | + | chr3_2:66797431-66797450 | None:intergenic | 20.0% |
| !!! | ATGAACAATTTTTGAATCTT+AGG | + | chr3_2:66798583-66798602 | None:intergenic | 20.0% |
| !!! | ATGAATGTTTTAAGACATAA+TGG | + | chr3_2:66799396-66799415 | None:intergenic | 20.0% |
| !! | AACATTCATTCAAATATCAA+TGG | - | chr3_2:66799407-66799426 | Msa0418930:five_prime_UTR | 20.0% |
| !! | AATGATGGAGATGATAAAAT+AGG | + | chr3_2:66797293-66797312 | None:intergenic | 25.0% |
| ! | TGTATTAATTGAATGGAAGT+TGG | + | chr3_2:66797424-66797443 | None:intergenic | 25.0% |
| ! | TTGTTAAGTTTCAACTTGTA+AGG | + | chr3_2:66797716-66797735 | None:intergenic | 25.0% |
| !!! | CTTTTTTTAACTTACCACAT+TGG | + | chr3_2:66797922-66797941 | None:intergenic | 25.0% |
| !! | TATTGACTACATAAATGCAT+AGG | - | chr3_2:66798103-66798122 | Msa0418930:intron | 25.0% |
| !! | TTGTGATTAATGTTTTGTAC+AGG | - | chr3_2:66798258-66798277 | Msa0418930:CDS | 25.0% |
| ! | TAAACCAAATAAAGACAGAT+AGG | - | chr3_2:66798322-66798341 | Msa0418930:CDS | 25.0% |
| ! | TTTGAGTACATTAAGCAAAA+AGG | - | chr3_2:66798429-66798448 | Msa0418930:intron | 25.0% |
| ! | TATAATTGACATGCAACTTT+AGG | - | chr3_2:66798555-66798574 | Msa0418930:intron | 25.0% |
| !! | ATTTTGTATACACCTATTAC+AGG | - | chr3_2:66798887-66798906 | Msa0418930:CDS | 25.0% |
| !! | TTTTGTATACACCTATTACA+GGG | - | chr3_2:66798888-66798907 | Msa0418930:CDS | 25.0% |
| !! | TTTGATGACAATGTATGATT+TGG | - | chr3_2:66799279-66799298 | Msa0418930:five_prime_UTR | 25.0% |
| !! | AATGATGGAGATGATAAAAT+AGG | + | chr3_2:66797293-66797312 | None:intergenic | 25.0% |
| ! | TGTATTAATTGAATGGAAGT+TGG | + | chr3_2:66797424-66797443 | None:intergenic | 25.0% |
| ! | TTGTTAAGTTTCAACTTGTA+AGG | + | chr3_2:66797716-66797735 | None:intergenic | 25.0% |
| !!! | CTTTTTTTAACTTACCACAT+TGG | + | chr3_2:66797922-66797941 | None:intergenic | 25.0% |
| !! | TATTGACTACATAAATGCAT+AGG | - | chr3_2:66798103-66798122 | Msa0418930:intron | 25.0% |
| !! | TTGTGATTAATGTTTTGTAC+AGG | - | chr3_2:66798258-66798277 | Msa0418930:CDS | 25.0% |
| ! | TAAACCAAATAAAGACAGAT+AGG | - | chr3_2:66798322-66798341 | Msa0418930:CDS | 25.0% |
| ! | TTTGAGTACATTAAGCAAAA+AGG | - | chr3_2:66798429-66798448 | Msa0418930:intron | 25.0% |
| ! | TATAATTGACATGCAACTTT+AGG | - | chr3_2:66798555-66798574 | Msa0418930:intron | 25.0% |
| !! | ATTTTGTATACACCTATTAC+AGG | - | chr3_2:66798887-66798906 | Msa0418930:CDS | 25.0% |
| !! | TTTTGTATACACCTATTACA+GGG | - | chr3_2:66798888-66798907 | Msa0418930:CDS | 25.0% |
| !! | TTTGATGACAATGTATGATT+TGG | - | chr3_2:66799279-66799298 | Msa0418930:five_prime_UTR | 25.0% |
| ! | ATGTTTGTGTTGTTCAAGTA+TGG | + | chr3_2:66797268-66797287 | None:intergenic | 30.0% |
| GGATGAACAATGTATAATGA+TGG | + | chr3_2:66797308-66797327 | None:intergenic | 30.0% | |
| AAAAAATGTGAGGAGGTTAA+AGG | + | chr3_2:66797341-66797360 | None:intergenic | 30.0% | |
| CTCAATAAAAAAATGTGAGG+AGG | + | chr3_2:66797348-66797367 | None:intergenic | 30.0% | |
| TTATATAGAGGATTGGAGAA+AGG | + | chr3_2:66797374-66797393 | None:intergenic | 30.0% | |
| TTAATTGAATGGAAGTTGGA+TGG | + | chr3_2:66797420-66797439 | None:intergenic | 30.0% | |
| AGTTTCCATGTTTCTTTGTT+TGG | + | chr3_2:66797468-66797487 | None:intergenic | 30.0% | |
| AAAGCTATAGTGCATAATAG+TGG | + | chr3_2:66798223-66798242 | None:intergenic | 30.0% | |
| CTAACCTATCTGTCTTTATT+TGG | + | chr3_2:66798329-66798348 | None:intergenic | 30.0% | |
| TGTGACAATCAAGAAAATCA+AGG | - | chr3_2:66798378-66798397 | Msa0418930:CDS | 30.0% | |
| TCAAAAATTGTTCATGTTGC+AGG | - | chr3_2:66798588-66798607 | Msa0418930:intron | 30.0% | |
| ! | ATCTGATTTCCAGTTTTACT+CGG | - | chr3_2:66798726-66798745 | Msa0418930:intron | 30.0% |
| CCAATAATTAGTTCCATCAA+CGG | + | chr3_2:66798979-66798998 | None:intergenic | 30.0% | |
| GAACTAATTATTGGATTGTG+AGG | - | chr3_2:66798985-66799004 | Msa0418930:CDS | 30.0% | |
| !! | TTTTGGAGGAGTTTTTAACT+GGG | + | chr3_2:66799112-66799131 | None:intergenic | 30.0% |
| !! | TTTTTGGAGGAGTTTTTAAC+TGG | + | chr3_2:66799113-66799132 | None:intergenic | 30.0% |
| ! | TTTAAGACATAATGGTTGCA+GGG | + | chr3_2:66799388-66799407 | None:intergenic | 30.0% |
| !!! | TTTTAAGACATAATGGTTGC+AGG | + | chr3_2:66799389-66799408 | None:intergenic | 30.0% |
| ! | ATGTTTGTGTTGTTCAAGTA+TGG | + | chr3_2:66797268-66797287 | None:intergenic | 30.0% |
| GGATGAACAATGTATAATGA+TGG | + | chr3_2:66797308-66797327 | None:intergenic | 30.0% | |
| AAAAAATGTGAGGAGGTTAA+AGG | + | chr3_2:66797341-66797360 | None:intergenic | 30.0% | |
| CTCAATAAAAAAATGTGAGG+AGG | + | chr3_2:66797348-66797367 | None:intergenic | 30.0% | |
| TTATATAGAGGATTGGAGAA+AGG | + | chr3_2:66797374-66797393 | None:intergenic | 30.0% | |
| TTAATTGAATGGAAGTTGGA+TGG | + | chr3_2:66797420-66797439 | None:intergenic | 30.0% | |
| AGTTTCCATGTTTCTTTGTT+TGG | + | chr3_2:66797468-66797487 | None:intergenic | 30.0% | |
| AAAGCTATAGTGCATAATAG+TGG | + | chr3_2:66798223-66798242 | None:intergenic | 30.0% | |
| CTAACCTATCTGTCTTTATT+TGG | + | chr3_2:66798329-66798348 | None:intergenic | 30.0% | |
| TGTGACAATCAAGAAAATCA+AGG | - | chr3_2:66798378-66798397 | Msa0418930:CDS | 30.0% | |
| TCAAAAATTGTTCATGTTGC+AGG | - | chr3_2:66798588-66798607 | Msa0418930:intron | 30.0% | |
| ! | ATCTGATTTCCAGTTTTACT+CGG | - | chr3_2:66798726-66798745 | Msa0418930:intron | 30.0% |
| CCAATAATTAGTTCCATCAA+CGG | + | chr3_2:66798979-66798998 | None:intergenic | 30.0% | |
| GAACTAATTATTGGATTGTG+AGG | - | chr3_2:66798985-66799004 | Msa0418930:CDS | 30.0% | |
| !! | TTTTGGAGGAGTTTTTAACT+GGG | + | chr3_2:66799112-66799131 | None:intergenic | 30.0% |
| !! | TTTTTGGAGGAGTTTTTAAC+TGG | + | chr3_2:66799113-66799132 | None:intergenic | 30.0% |
| ! | TTTAAGACATAATGGTTGCA+GGG | + | chr3_2:66799388-66799407 | None:intergenic | 30.0% |
| !!! | TTTTAAGACATAATGGTTGC+AGG | + | chr3_2:66799389-66799408 | None:intergenic | 30.0% |
| TTGTTCAAGTATGGAAGCAA+AGG | + | chr3_2:66797259-66797278 | None:intergenic | 35.0% | |
| GAGGTTAAAGGTTTCTTAAG+GGG | + | chr3_2:66797329-66797348 | None:intergenic | 35.0% | |
| GGAGGTTAAAGGTTTCTTAA+GGG | + | chr3_2:66797330-66797349 | None:intergenic | 35.0% | |
| AGGAGGTTAAAGGTTTCTTA+AGG | + | chr3_2:66797331-66797350 | None:intergenic | 35.0% | |
| GGACTGTTTATATAGAGGAT+TGG | + | chr3_2:66797381-66797400 | None:intergenic | 35.0% | |
| TTGGAAGCAATTCACTTGTT+TGG | + | chr3_2:66797449-66797468 | None:intergenic | 35.0% | |
| TGCTTCCAAACAAAGAAACA+TGG | - | chr3_2:66797460-66797479 | Msa0418930:three_prime_UTR | 35.0% | |
| TACTTCAAGAACCAAAGCAA+TGG | + | chr3_2:66797516-66797535 | None:intergenic | 35.0% | |
| !!! | TATCCATTTTGTTGGTGTTG+TGG | + | chr3_2:66797691-66797710 | None:intergenic | 35.0% |
| ! | GTAAGGCTTATCCATTTTGT+TGG | + | chr3_2:66797699-66797718 | None:intergenic | 35.0% |
| ! | AAATTCATGGTTGGTCATGT+CGG | + | chr3_2:66797744-66797763 | None:intergenic | 35.0% |
| ACATGACCAACCATGAATTT+AGG | - | chr3_2:66797744-66797763 | Msa0418930:CDS | 35.0% | |
| CATAGGTAGTCCTAAATTCA+TGG | + | chr3_2:66797757-66797776 | None:intergenic | 35.0% | |
| ATTAACCTTTGATCCAGCAT+AGG | + | chr3_2:66797774-66797793 | None:intergenic | 35.0% | |
| GTTGCAAACCTGAAACTTAA+AGG | - | chr3_2:66798039-66798058 | Msa0418930:CDS | 35.0% | |
| ATAAGCTCTTGTTCAGACAA+AGG | + | chr3_2:66798354-66798373 | None:intergenic | 35.0% | |
| CAAGAAAATCAAGGATGCAA+TGG | - | chr3_2:66798387-66798406 | Msa0418930:CDS | 35.0% | |
| AAAATCAAGGATGCAATGGT+GGG | - | chr3_2:66798391-66798410 | Msa0418930:CDS | 35.0% | |
| GAGTACATTAAGCAAAAAGG+TGG | - | chr3_2:66798432-66798451 | Msa0418930:intron | 35.0% | |
| !! | ATCCATCATTTGCTGTGTAA+GGG | + | chr3_2:66798479-66798498 | None:intergenic | 35.0% |
| ! | TTTTTACCTCCGAGTAAAAC+TGG | + | chr3_2:66798738-66798757 | None:intergenic | 35.0% |
| ATTCTCTTGTGTCAATAGAG+AGG | + | chr3_2:66798772-66798791 | None:intergenic | 35.0% | |
| CAGTAAATACTCCCTGTAAT+AGG | + | chr3_2:66798902-66798921 | None:intergenic | 35.0% | |
| !! | CTATTACAGGGAGTATTTAC+TGG | - | chr3_2:66798900-66798919 | Msa0418930:CDS | 35.0% |
| TGTGGTAAAGAGCTAAATCA+TGG | - | chr3_2:66798927-66798946 | Msa0418930:CDS | 35.0% | |
| AATCATGGTGTAGCAATAGT+AGG | - | chr3_2:66798942-66798961 | Msa0418930:CDS | 35.0% | |
| ! | CCGTTGATGGAACTAATTAT+TGG | - | chr3_2:66798976-66798995 | Msa0418930:CDS | 35.0% |
| AAGGTTACATCAGAATGCAA+AGG | - | chr3_2:66799036-66799055 | Msa0418930:CDS | 35.0% | |
| GCAAAGGAATGTATCTAACA+AGG | - | chr3_2:66799052-66799071 | Msa0418930:CDS | 35.0% | |
| AGGAATGTATCTAACAAGGA+AGG | - | chr3_2:66799056-66799075 | Msa0418930:CDS | 35.0% | |
| TCATCCTTGGTAGATGATAA+AGG | + | chr3_2:66799146-66799165 | None:intergenic | 35.0% | |
| AAACATTCAAAGCTCATCCT+TGG | + | chr3_2:66799159-66799178 | None:intergenic | 35.0% | |
| TTGTTCAAGTATGGAAGCAA+AGG | + | chr3_2:66797259-66797278 | None:intergenic | 35.0% | |
| GAGGTTAAAGGTTTCTTAAG+GGG | + | chr3_2:66797329-66797348 | None:intergenic | 35.0% | |
| GGAGGTTAAAGGTTTCTTAA+GGG | + | chr3_2:66797330-66797349 | None:intergenic | 35.0% | |
| AGGAGGTTAAAGGTTTCTTA+AGG | + | chr3_2:66797331-66797350 | None:intergenic | 35.0% | |
| GGACTGTTTATATAGAGGAT+TGG | + | chr3_2:66797381-66797400 | None:intergenic | 35.0% | |
| TTGGAAGCAATTCACTTGTT+TGG | + | chr3_2:66797449-66797468 | None:intergenic | 35.0% | |
| TGCTTCCAAACAAAGAAACA+TGG | - | chr3_2:66797460-66797479 | Msa0418930:three_prime_UTR | 35.0% | |
| TACTTCAAGAACCAAAGCAA+TGG | + | chr3_2:66797516-66797535 | None:intergenic | 35.0% | |
| !!! | TATCCATTTTGTTGGTGTTG+TGG | + | chr3_2:66797691-66797710 | None:intergenic | 35.0% |
| ! | GTAAGGCTTATCCATTTTGT+TGG | + | chr3_2:66797699-66797718 | None:intergenic | 35.0% |
| ! | AAATTCATGGTTGGTCATGT+CGG | + | chr3_2:66797744-66797763 | None:intergenic | 35.0% |
| ACATGACCAACCATGAATTT+AGG | - | chr3_2:66797744-66797763 | Msa0418930:CDS | 35.0% | |
| CATAGGTAGTCCTAAATTCA+TGG | + | chr3_2:66797757-66797776 | None:intergenic | 35.0% | |
| ATTAACCTTTGATCCAGCAT+AGG | + | chr3_2:66797774-66797793 | None:intergenic | 35.0% | |
| GTTGCAAACCTGAAACTTAA+AGG | - | chr3_2:66798039-66798058 | Msa0418930:CDS | 35.0% | |
| ATAAGCTCTTGTTCAGACAA+AGG | + | chr3_2:66798354-66798373 | None:intergenic | 35.0% | |
| CAAGAAAATCAAGGATGCAA+TGG | - | chr3_2:66798387-66798406 | Msa0418930:CDS | 35.0% | |
| AAAATCAAGGATGCAATGGT+GGG | - | chr3_2:66798391-66798410 | Msa0418930:CDS | 35.0% | |
| GAGTACATTAAGCAAAAAGG+TGG | - | chr3_2:66798432-66798451 | Msa0418930:intron | 35.0% | |
| !! | ATCCATCATTTGCTGTGTAA+GGG | + | chr3_2:66798479-66798498 | None:intergenic | 35.0% |
| ! | TTTTTACCTCCGAGTAAAAC+TGG | + | chr3_2:66798738-66798757 | None:intergenic | 35.0% |
| ATTCTCTTGTGTCAATAGAG+AGG | + | chr3_2:66798772-66798791 | None:intergenic | 35.0% | |
| CAGTAAATACTCCCTGTAAT+AGG | + | chr3_2:66798902-66798921 | None:intergenic | 35.0% | |
| !! | CTATTACAGGGAGTATTTAC+TGG | - | chr3_2:66798900-66798919 | Msa0418930:CDS | 35.0% |
| TGTGGTAAAGAGCTAAATCA+TGG | - | chr3_2:66798927-66798946 | Msa0418930:CDS | 35.0% | |
| AATCATGGTGTAGCAATAGT+AGG | - | chr3_2:66798942-66798961 | Msa0418930:CDS | 35.0% | |
| ! | CCGTTGATGGAACTAATTAT+TGG | - | chr3_2:66798976-66798995 | Msa0418930:CDS | 35.0% |
| AAGGTTACATCAGAATGCAA+AGG | - | chr3_2:66799036-66799055 | Msa0418930:CDS | 35.0% | |
| GCAAAGGAATGTATCTAACA+AGG | - | chr3_2:66799052-66799071 | Msa0418930:CDS | 35.0% | |
| AGGAATGTATCTAACAAGGA+AGG | - | chr3_2:66799056-66799075 | Msa0418930:CDS | 35.0% | |
| TCATCCTTGGTAGATGATAA+AGG | + | chr3_2:66799146-66799165 | None:intergenic | 35.0% | |
| AAACATTCAAAGCTCATCCT+TGG | + | chr3_2:66799159-66799178 | None:intergenic | 35.0% | |
| GAATGGAAGTTGGATGGAAA+GGG | + | chr3_2:66797414-66797433 | None:intergenic | 40.0% | |
| TGAATGGAAGTTGGATGGAA+AGG | + | chr3_2:66797415-66797434 | None:intergenic | 40.0% | |
| GATTGTTCTGTCCATTGCTT+TGG | - | chr3_2:66797502-66797521 | Msa0418930:exon | 40.0% | |
| ATCTTGGAAATCGAAGCTCT+CGG | + | chr3_2:66797540-66797559 | None:intergenic | 40.0% | |
| CTGAGGACACATCTTTATCT+TGG | + | chr3_2:66797556-66797575 | None:intergenic | 40.0% | |
| !! | AGCGCTTTTGTTTCTCATCA+AGG | + | chr3_2:66797637-66797656 | None:intergenic | 40.0% |
| TGTCCACAACACCAACAAAA+TGG | - | chr3_2:66797685-66797704 | Msa0418930:CDS | 40.0% | |
| GGTAGTCCTAAATTCATGGT+TGG | + | chr3_2:66797753-66797772 | None:intergenic | 40.0% | |
| ! | GAATTTAGGACTACCTATGC+TGG | - | chr3_2:66797758-66797777 | Msa0418930:CDS | 40.0% |
| ! | TCTGTTGATTGGAGGAAGAA+AGG | - | chr3_2:66797869-66797888 | Msa0418930:intron | 40.0% |
| GACACCATCTGATCAAAGAT+CGG | - | chr3_2:66797993-66798012 | Msa0418930:CDS | 40.0% | |
| TCATCCGATCTTTGATCAGA+TGG | + | chr3_2:66798000-66798019 | None:intergenic | 40.0% | |
| ! | TGTTTTGTACAGGTAGTTGC+TGG | - | chr3_2:66798268-66798287 | Msa0418930:CDS | 40.0% |
| ! | GTTTTGTACAGGTAGTTGCT+GGG | - | chr3_2:66798269-66798288 | Msa0418930:CDS | 40.0% |
| TCAACTGTTGTAGCTGTTGA+AGG | - | chr3_2:66798297-66798316 | Msa0418930:CDS | 40.0% | |
| GAAAATCAAGGATGCAATGG+TGG | - | chr3_2:66798390-66798409 | Msa0418930:CDS | 40.0% | |
| TACCCTTACACAGCAAATGA+TGG | - | chr3_2:66798474-66798493 | Msa0418930:intron | 40.0% | |
| !! | GATCCATCATTTGCTGTGTA+AGG | + | chr3_2:66798480-66798499 | None:intergenic | 40.0% |
| GACCATCAATTGATACAGCT+GGG | + | chr3_2:66798621-66798640 | None:intergenic | 40.0% | |
| TGACCATCAATTGATACAGC+TGG | + | chr3_2:66798622-66798641 | None:intergenic | 40.0% | |
| ! | AAAGCATCTTCATCGTTAGC+CGG | + | chr3_2:66798655-66798674 | None:intergenic | 40.0% |
| AAACTGGAAATCAGATCCTC+CGG | + | chr3_2:66798722-66798741 | None:intergenic | 40.0% | |
| ! | TGATTTCCAGTTTTACTCGG+AGG | - | chr3_2:66798729-66798748 | Msa0418930:intron | 40.0% |
| GGTGTAGCAATAGTAGGATA+TGG | - | chr3_2:66798948-66798967 | Msa0418930:CDS | 40.0% | |
| ATTGGATTGTGAGGAACTCA+TGG | - | chr3_2:66798994-66799013 | Msa0418930:CDS | 40.0% | |
| TTGGATTGTGAGGAACTCAT+GGG | - | chr3_2:66798995-66799014 | Msa0418930:CDS | 40.0% | |
| TCTAACAAGGAAGGACTTTG+TGG | - | chr3_2:66799065-66799084 | Msa0418930:CDS | 40.0% | |
| ! | TAAAGGTCCTGCTGGATTTT+TGG | + | chr3_2:66799129-66799148 | None:intergenic | 40.0% |
| AGGACCTTTATCATCTACCA+AGG | - | chr3_2:66799139-66799158 | Msa0418930:CDS | 40.0% | |
| ATAATGGTTGCAGGGAATGA+GGG | + | chr3_2:66799380-66799399 | None:intergenic | 40.0% | |
| GAATGGAAGTTGGATGGAAA+GGG | + | chr3_2:66797414-66797433 | None:intergenic | 40.0% | |
| TGAATGGAAGTTGGATGGAA+AGG | + | chr3_2:66797415-66797434 | None:intergenic | 40.0% | |
| GATTGTTCTGTCCATTGCTT+TGG | - | chr3_2:66797502-66797521 | Msa0418930:exon | 40.0% | |
| ATCTTGGAAATCGAAGCTCT+CGG | + | chr3_2:66797540-66797559 | None:intergenic | 40.0% | |
| CTGAGGACACATCTTTATCT+TGG | + | chr3_2:66797556-66797575 | None:intergenic | 40.0% | |
| !! | AGCGCTTTTGTTTCTCATCA+AGG | + | chr3_2:66797637-66797656 | None:intergenic | 40.0% |
| TGTCCACAACACCAACAAAA+TGG | - | chr3_2:66797685-66797704 | Msa0418930:CDS | 40.0% | |
| GGTAGTCCTAAATTCATGGT+TGG | + | chr3_2:66797753-66797772 | None:intergenic | 40.0% | |
| ! | GAATTTAGGACTACCTATGC+TGG | - | chr3_2:66797758-66797777 | Msa0418930:CDS | 40.0% |
| ! | TCTGTTGATTGGAGGAAGAA+AGG | - | chr3_2:66797869-66797888 | Msa0418930:intron | 40.0% |
| GACACCATCTGATCAAAGAT+CGG | - | chr3_2:66797993-66798012 | Msa0418930:CDS | 40.0% | |
| TCATCCGATCTTTGATCAGA+TGG | + | chr3_2:66798000-66798019 | None:intergenic | 40.0% | |
| ! | TGTTTTGTACAGGTAGTTGC+TGG | - | chr3_2:66798268-66798287 | Msa0418930:CDS | 40.0% |
| ! | GTTTTGTACAGGTAGTTGCT+GGG | - | chr3_2:66798269-66798288 | Msa0418930:CDS | 40.0% |
| TCAACTGTTGTAGCTGTTGA+AGG | - | chr3_2:66798297-66798316 | Msa0418930:CDS | 40.0% | |
| GAAAATCAAGGATGCAATGG+TGG | - | chr3_2:66798390-66798409 | Msa0418930:CDS | 40.0% | |
| TACCCTTACACAGCAAATGA+TGG | - | chr3_2:66798474-66798493 | Msa0418930:intron | 40.0% | |
| !! | GATCCATCATTTGCTGTGTA+AGG | + | chr3_2:66798480-66798499 | None:intergenic | 40.0% |
| GACCATCAATTGATACAGCT+GGG | + | chr3_2:66798621-66798640 | None:intergenic | 40.0% | |
| TGACCATCAATTGATACAGC+TGG | + | chr3_2:66798622-66798641 | None:intergenic | 40.0% | |
| ! | AAAGCATCTTCATCGTTAGC+CGG | + | chr3_2:66798655-66798674 | None:intergenic | 40.0% |
| AAACTGGAAATCAGATCCTC+CGG | + | chr3_2:66798722-66798741 | None:intergenic | 40.0% | |
| ! | TGATTTCCAGTTTTACTCGG+AGG | - | chr3_2:66798729-66798748 | Msa0418930:intron | 40.0% |
| GGTGTAGCAATAGTAGGATA+TGG | - | chr3_2:66798948-66798967 | Msa0418930:CDS | 40.0% | |
| ATTGGATTGTGAGGAACTCA+TGG | - | chr3_2:66798994-66799013 | Msa0418930:CDS | 40.0% | |
| TTGGATTGTGAGGAACTCAT+GGG | - | chr3_2:66798995-66799014 | Msa0418930:CDS | 40.0% | |
| TCTAACAAGGAAGGACTTTG+TGG | - | chr3_2:66799065-66799084 | Msa0418930:CDS | 40.0% | |
| ! | TAAAGGTCCTGCTGGATTTT+TGG | + | chr3_2:66799129-66799148 | None:intergenic | 40.0% |
| AGGACCTTTATCATCTACCA+AGG | - | chr3_2:66799139-66799158 | Msa0418930:CDS | 40.0% | |
| ATAATGGTTGCAGGGAATGA+GGG | + | chr3_2:66799380-66799399 | None:intergenic | 40.0% | |
| GCAGGGGACTGTTTATATAG+AGG | + | chr3_2:66797386-66797405 | None:intergenic | 45.0% | |
| TGTCCTCAGACAAAAGCTTG+TGG | - | chr3_2:66797567-66797586 | Msa0418930:CDS | 45.0% | |
| GTCCTCAGACAAAAGCTTGT+GGG | - | chr3_2:66797568-66797587 | Msa0418930:CDS | 45.0% | |
| TGTGGGACTTATACGAGAGA+TGG | - | chr3_2:66797585-66797604 | Msa0418930:CDS | 45.0% | |
| GACTACCTATGCTGGATCAA+AGG | - | chr3_2:66797766-66797785 | Msa0418930:intron | 45.0% | |
| AATCACCACAGAATGTTCCG+AGG | - | chr3_2:66797791-66797810 | Msa0418930:intron | 45.0% | |
| ATGAATGTTCCACTTCCACG+TGG | + | chr3_2:66797821-66797840 | None:intergenic | 45.0% | |
| ATCAACAGAAGCAGGAGCTT+TGG | + | chr3_2:66797858-66797877 | None:intergenic | 45.0% | |
| AAGCTCCTGCTTCTGTTGAT+TGG | - | chr3_2:66797858-66797877 | Msa0418930:intron | 45.0% | |
| TTCCTCCAATCAACAGAAGC+AGG | + | chr3_2:66797866-66797885 | None:intergenic | 45.0% | |
| ! | CCACGAGTCCTTTAAGTTTC+AGG | + | chr3_2:66798050-66798069 | None:intergenic | 45.0% |
| CCTGAAACTTAAAGGACTCG+TGG | - | chr3_2:66798047-66798066 | Msa0418930:CDS | 45.0% | |
| GTCCCAGCTGTATCAATTGA+TGG | - | chr3_2:66798616-66798635 | Msa0418930:intron | 45.0% | |
| TGATGGTCATGAGACTGTTC+CGG | - | chr3_2:66798633-66798652 | Msa0418930:intron | 45.0% | |
| ! | GGAGTATTTACTGGCGATTG+TGG | - | chr3_2:66798909-66798928 | Msa0418930:CDS | 45.0% |
| GGATATGGAACAACCGTTGA+TGG | - | chr3_2:66798963-66798982 | Msa0418930:CDS | 45.0% | |
| TGGATTGTGAGGAACTCATG+GGG | - | chr3_2:66798996-66799015 | Msa0418930:CDS | 45.0% | |
| AGGACTTTGTGGCATAGCTA+TGG | - | chr3_2:66799076-66799095 | Msa0418930:CDS | 45.0% | |
| !! | GGAGGAGTTTTTAACTGGGT+AGG | + | chr3_2:66799108-66799127 | None:intergenic | 45.0% |
| AACTCCTCCAAAAATCCAGC+AGG | - | chr3_2:66799119-66799138 | Msa0418930:CDS | 45.0% | |
| GTAGATGATAAAGGTCCTGC+TGG | + | chr3_2:66799137-66799156 | None:intergenic | 45.0% | |
| CATAATGGTTGCAGGGAATG+AGG | + | chr3_2:66799381-66799400 | None:intergenic | 45.0% | |
| GCAGGGGACTGTTTATATAG+AGG | + | chr3_2:66797386-66797405 | None:intergenic | 45.0% | |
| TGTCCTCAGACAAAAGCTTG+TGG | - | chr3_2:66797567-66797586 | Msa0418930:CDS | 45.0% | |
| GTCCTCAGACAAAAGCTTGT+GGG | - | chr3_2:66797568-66797587 | Msa0418930:CDS | 45.0% | |
| TGTGGGACTTATACGAGAGA+TGG | - | chr3_2:66797585-66797604 | Msa0418930:CDS | 45.0% | |
| GACTACCTATGCTGGATCAA+AGG | - | chr3_2:66797766-66797785 | Msa0418930:intron | 45.0% | |
| AATCACCACAGAATGTTCCG+AGG | - | chr3_2:66797791-66797810 | Msa0418930:intron | 45.0% | |
| ATGAATGTTCCACTTCCACG+TGG | + | chr3_2:66797821-66797840 | None:intergenic | 45.0% | |
| ATCAACAGAAGCAGGAGCTT+TGG | + | chr3_2:66797858-66797877 | None:intergenic | 45.0% | |
| AAGCTCCTGCTTCTGTTGAT+TGG | - | chr3_2:66797858-66797877 | Msa0418930:intron | 45.0% | |
| TTCCTCCAATCAACAGAAGC+AGG | + | chr3_2:66797866-66797885 | None:intergenic | 45.0% | |
| ! | CCACGAGTCCTTTAAGTTTC+AGG | + | chr3_2:66798050-66798069 | None:intergenic | 45.0% |
| CCTGAAACTTAAAGGACTCG+TGG | - | chr3_2:66798047-66798066 | Msa0418930:CDS | 45.0% | |
| GTCCCAGCTGTATCAATTGA+TGG | - | chr3_2:66798616-66798635 | Msa0418930:intron | 45.0% | |
| TGATGGTCATGAGACTGTTC+CGG | - | chr3_2:66798633-66798652 | Msa0418930:intron | 45.0% | |
| ! | GGAGTATTTACTGGCGATTG+TGG | - | chr3_2:66798909-66798928 | Msa0418930:CDS | 45.0% |
| GGATATGGAACAACCGTTGA+TGG | - | chr3_2:66798963-66798982 | Msa0418930:CDS | 45.0% | |
| TGGATTGTGAGGAACTCATG+GGG | - | chr3_2:66798996-66799015 | Msa0418930:CDS | 45.0% | |
| AGGACTTTGTGGCATAGCTA+TGG | - | chr3_2:66799076-66799095 | Msa0418930:CDS | 45.0% | |
| !! | GGAGGAGTTTTTAACTGGGT+AGG | + | chr3_2:66799108-66799127 | None:intergenic | 45.0% |
| AACTCCTCCAAAAATCCAGC+AGG | - | chr3_2:66799119-66799138 | Msa0418930:CDS | 45.0% | |
| GTAGATGATAAAGGTCCTGC+TGG | + | chr3_2:66799137-66799156 | None:intergenic | 45.0% | |
| CATAATGGTTGCAGGGAATG+AGG | + | chr3_2:66799381-66799400 | None:intergenic | 45.0% | |
| !! | AAAAATATAATATATAACTT+AGG | + | chr3_2:66798200-66798219 | None:intergenic | 5.0% |
| !! | AAAAATATAATATATAACTT+AGG | + | chr3_2:66798200-66798219 | None:intergenic | 5.0% |
| GATGGAAAGGGAAAGAGCAG+GGG | + | chr3_2:66797402-66797421 | None:intergenic | 50.0% | |
| GGATGGAAAGGGAAAGAGCA+GGG | + | chr3_2:66797403-66797422 | None:intergenic | 50.0% | |
| TGGATGGAAAGGGAAAGAGC+AGG | + | chr3_2:66797404-66797423 | None:intergenic | 50.0% | |
| ! | GTCCCACAAGCTTTTGTCTG+AGG | + | chr3_2:66797573-66797592 | None:intergenic | 50.0% |
| GGGACTTATACGAGAGATGG+AGG | - | chr3_2:66797588-66797607 | Msa0418930:CDS | 50.0% | |
| ! | CTCCTGCTTCTGTTGATTGG+AGG | - | chr3_2:66797861-66797880 | Msa0418930:intron | 50.0% |
| !! | GAAGAAAGGTGCTGTCACTG+AGG | - | chr3_2:66797883-66797902 | Msa0418930:intron | 50.0% |
| GTCACTGAGGTCAAGGATCA+AGG | - | chr3_2:66797896-66797915 | Msa0418930:intron | 50.0% | |
| GTCAAGGATCAAGGCCAATG+TGG | - | chr3_2:66797905-66797924 | Msa0418930:intron | 50.0% | |
| ! | CTGTTGACTGCGTGAATGCA+TGG | + | chr3_2:66797970-66797989 | None:intergenic | 50.0% |
| !! | AGGATGCAATGGTGGGCTAA+TGG | - | chr3_2:66798398-66798417 | Msa0418930:intron | 50.0% |
| CTATGGCTACGGATACAGGT+TGG | + | chr3_2:66798696-66798715 | None:intergenic | 50.0% | |
| GCATCTATGGCTACGGATAC+AGG | + | chr3_2:66798700-66798719 | None:intergenic | 50.0% | |
| GTATCCGTAGCCATAGATGC+CGG | - | chr3_2:66798700-66798719 | Msa0418930:intron | 50.0% | |
| ATCAGATCCTCCGGCATCTA+TGG | + | chr3_2:66798713-66798732 | None:intergenic | 50.0% | |
| !! | AGGTCCTGCTGGATTTTTGG+AGG | + | chr3_2:66799126-66799145 | None:intergenic | 50.0% |
| GATGGAAAGGGAAAGAGCAG+GGG | + | chr3_2:66797402-66797421 | None:intergenic | 50.0% | |
| GGATGGAAAGGGAAAGAGCA+GGG | + | chr3_2:66797403-66797422 | None:intergenic | 50.0% | |
| TGGATGGAAAGGGAAAGAGC+AGG | + | chr3_2:66797404-66797423 | None:intergenic | 50.0% | |
| ! | GTCCCACAAGCTTTTGTCTG+AGG | + | chr3_2:66797573-66797592 | None:intergenic | 50.0% |
| GGGACTTATACGAGAGATGG+AGG | - | chr3_2:66797588-66797607 | Msa0418930:CDS | 50.0% | |
| ! | CTCCTGCTTCTGTTGATTGG+AGG | - | chr3_2:66797861-66797880 | Msa0418930:intron | 50.0% |
| !! | GAAGAAAGGTGCTGTCACTG+AGG | - | chr3_2:66797883-66797902 | Msa0418930:intron | 50.0% |
| GTCACTGAGGTCAAGGATCA+AGG | - | chr3_2:66797896-66797915 | Msa0418930:intron | 50.0% | |
| GTCAAGGATCAAGGCCAATG+TGG | - | chr3_2:66797905-66797924 | Msa0418930:intron | 50.0% | |
| ! | CTGTTGACTGCGTGAATGCA+TGG | + | chr3_2:66797970-66797989 | None:intergenic | 50.0% |
| !! | AGGATGCAATGGTGGGCTAA+TGG | - | chr3_2:66798398-66798417 | Msa0418930:intron | 50.0% |
| CTATGGCTACGGATACAGGT+TGG | + | chr3_2:66798696-66798715 | None:intergenic | 50.0% | |
| GCATCTATGGCTACGGATAC+AGG | + | chr3_2:66798700-66798719 | None:intergenic | 50.0% | |
| GTATCCGTAGCCATAGATGC+CGG | - | chr3_2:66798700-66798719 | Msa0418930:intron | 50.0% | |
| ATCAGATCCTCCGGCATCTA+TGG | + | chr3_2:66798713-66798732 | None:intergenic | 50.0% | |
| !! | AGGTCCTGCTGGATTTTTGG+AGG | + | chr3_2:66799126-66799145 | None:intergenic | 50.0% |
| GAGATGGAGGAGTCACCACA+CGG | - | chr3_2:66797601-66797620 | Msa0418930:CDS | 55.0% | |
| GGAGTCACCACACGGTTTCT+CGG | - | chr3_2:66797609-66797628 | Msa0418930:CDS | 55.0% | |
| CAAGGTTCCGAGAAACCGTG+TGG | + | chr3_2:66797619-66797638 | None:intergenic | 55.0% | |
| ! | AGGTGCTGTCACTGAGGTCA+AGG | - | chr3_2:66797889-66797908 | Msa0418930:intron | 55.0% |
| !! | GGCTACGGATACAGGTTGGT+TGG | + | chr3_2:66798692-66798711 | None:intergenic | 55.0% |
| TCCTCCGGCATCTATGGCTA+CGG | + | chr3_2:66798707-66798726 | None:intergenic | 55.0% | |
| TGTGAGGAACTCATGGGGAG+CGG | - | chr3_2:66799001-66799020 | Msa0418930:CDS | 55.0% | |
| GAACTCATGGGGAGCGGAAT+GGG | - | chr3_2:66799007-66799026 | Msa0418930:CDS | 55.0% | |
| AACTCATGGGGAGCGGAATG+GGG | - | chr3_2:66799008-66799027 | Msa0418930:CDS | 55.0% | |
| GAGATGGAGGAGTCACCACA+CGG | - | chr3_2:66797601-66797620 | Msa0418930:CDS | 55.0% | |
| GGAGTCACCACACGGTTTCT+CGG | - | chr3_2:66797609-66797628 | Msa0418930:CDS | 55.0% | |
| CAAGGTTCCGAGAAACCGTG+TGG | + | chr3_2:66797619-66797638 | None:intergenic | 55.0% | |
| ! | AGGTGCTGTCACTGAGGTCA+AGG | - | chr3_2:66797889-66797908 | Msa0418930:intron | 55.0% |
| !! | GGCTACGGATACAGGTTGGT+TGG | + | chr3_2:66798692-66798711 | None:intergenic | 55.0% |
| TCCTCCGGCATCTATGGCTA+CGG | + | chr3_2:66798707-66798726 | None:intergenic | 55.0% | |
| TGTGAGGAACTCATGGGGAG+CGG | - | chr3_2:66799001-66799020 | Msa0418930:CDS | 55.0% | |
| GAACTCATGGGGAGCGGAAT+GGG | - | chr3_2:66799007-66799026 | Msa0418930:CDS | 55.0% | |
| AACTCATGGGGAGCGGAATG+GGG | - | chr3_2:66799008-66799027 | Msa0418930:CDS | 55.0% | |
| GCGTGCCTCGGAACATTCTG+TGG | + | chr3_2:66797799-66797818 | None:intergenic | 60.0% | |
| TCCGTAGCCATAGATGCCGG+AGG | - | chr3_2:66798703-66798722 | Msa0418930:intron | 60.0% | |
| GGAACTCATGGGGAGCGGAA+TGG | - | chr3_2:66799006-66799025 | Msa0418930:CDS | 60.0% | |
| GGAGCGGAATGGGGTGAACA+AGG | - | chr3_2:66799017-66799036 | Msa0418930:CDS | 60.0% | |
| GCGTGCCTCGGAACATTCTG+TGG | + | chr3_2:66797799-66797818 | None:intergenic | 60.0% | |
| TCCGTAGCCATAGATGCCGG+AGG | - | chr3_2:66798703-66798722 | Msa0418930:intron | 60.0% | |
| GGAACTCATGGGGAGCGGAA+TGG | - | chr3_2:66799006-66799025 | Msa0418930:CDS | 60.0% | |
| GGAGCGGAATGGGGTGAACA+AGG | - | chr3_2:66799017-66799036 | Msa0418930:CDS | 60.0% | |
| ATGTTCCGAGGCACGCCACG+TGG | - | chr3_2:66797803-66797822 | Msa0418930:intron | 65.0% | |
| CACTTCCACGTGGCGTGCCT+CGG | + | chr3_2:66797811-66797830 | None:intergenic | 65.0% | |
| ATGTTCCGAGGCACGCCACG+TGG | - | chr3_2:66797803-66797822 | Msa0418930:intron | 65.0% | |
| CACTTCCACGTGGCGTGCCT+CGG | + | chr3_2:66797811-66797830 | None:intergenic | 65.0% | |
| CGAGGCACGCCACGTGGAAG+TGG | - | chr3_2:66797809-66797828 | Msa0418930:intron | 70.0% | |
| CGAGGCACGCCACGTGGAAG+TGG | - | chr3_2:66797809-66797828 | Msa0418930:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 66797252 | 66799438 | 66797252 | ID=Msa0418930;Name=Msa0418930 |
| chr3_2 | mRNA | 66797252 | 66799438 | 66797252 | ID=Msa0418930-mRNA-1;Parent=Msa0418930;Name=Msa0418930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=227|1|1|1|1|1|4|266|362 |
| chr3_2 | exon | 66797252 | 66797781 | 66797252 | ID=Msa0418930-mRNA-1:exon:15430;Parent=Msa0418930-mRNA-1 |
| chr3_2 | exon | 66797940 | 66798080 | 66797940 | ID=Msa0418930-mRNA-1:exon:15429;Parent=Msa0418930-mRNA-1 |
| chr3_2 | exon | 66798175 | 66798410 | 66798175 | ID=Msa0418930-mRNA-1:exon:15428;Parent=Msa0418930-mRNA-1 |
| chr3_2 | exon | 66798764 | 66799438 | 66798764 | ID=Msa0418930-mRNA-1:exon:15427;Parent=Msa0418930-mRNA-1 |
| chr3_2 | five_prime_UTR | 66799212 | 66799438 | 66799212 | ID=Msa0418930-mRNA-1:five_prime_utr;Parent=Msa0418930-mRNA-1 |
| chr3_2 | CDS | 66798764 | 66799211 | 66798764 | ID=Msa0418930-mRNA-1:cds;Parent=Msa0418930-mRNA-1 |
| chr3_2 | CDS | 66798175 | 66798410 | 66798175 | ID=Msa0418930-mRNA-1:cds;Parent=Msa0418930-mRNA-1 |
| chr3_2 | CDS | 66797940 | 66798080 | 66797940 | ID=Msa0418930-mRNA-1:cds;Parent=Msa0418930-mRNA-1 |
| chr3_2 | CDS | 66797518 | 66797781 | 66797518 | ID=Msa0418930-mRNA-1:cds;Parent=Msa0418930-mRNA-1 |
| chr3_2 | three_prime_UTR | 66797252 | 66797517 | 66797252 | ID=Msa0418930-mRNA-1:three_prime_utr;Parent=Msa0418930-mRNA-1 |
| Gene Sequence |
| Protein sequence |