Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432970 | XP_003591273.1 | 97.415 | 735 | 19 | 0 | 1 | 735 | 1 | 735 | 0.0 | 1485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432970 | sp|O82462|SYEC_ARATH | 73.029 | 723 | 182 | 5 | 8 | 729 | 6 | 716 | 0.0 | 1122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432970 | G7IAE3 | 97.415 | 735 | 19 | 0 | 1 | 735 | 1 | 735 | 0.0 | 1485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa1432970 | 0.803757 | 2.993528e-49 | -8.615850e-47 |
| Msa0036870 | Msa1432970 | 0.859763 | 3.301893e-63 | -8.615850e-47 |
| Msa0081980 | Msa1432970 | 0.804066 | 2.581537e-49 | -8.615850e-47 |
| Msa0090400 | Msa1432970 | 0.835410 | 1.705179e-56 | -8.615850e-47 |
| Msa1432970 | Msa1454140 | 0.854953 | 8.727383e-62 | -8.615850e-47 |
| Msa0740710 | Msa1432970 | 0.809282 | 2.043315e-50 | -8.615850e-47 |
| Msa0743440 | Msa1432970 | 0.827570 | 1.454780e-54 | -8.615850e-47 |
| Msa0777750 | Msa1432970 | 0.812204 | 4.769214e-51 | -8.615850e-47 |
| Msa0824450 | Msa1432970 | 0.802934 | 4.431950e-49 | -8.615850e-47 |
| Msa0835490 | Msa1432970 | 0.802735 | 4.871365e-49 | -8.615850e-47 |
| Msa0121330 | Msa1432970 | 0.809164 | 2.166128e-50 | -8.615850e-47 |
| Msa0137880 | Msa1432970 | 0.821142 | 4.724871e-53 | -8.615850e-47 |
| Msa0174290 | Msa1432970 | 0.819186 | 1.325458e-52 | -8.615850e-47 |
| Msa0188610 | Msa1432970 | 0.835404 | 1.711439e-56 | -8.615850e-47 |
| Msa0209980 | Msa1432970 | 0.805800 | 1.120554e-49 | -8.615850e-47 |
| Msa0230800 | Msa1432970 | 0.808155 | 3.557989e-50 | -8.615850e-47 |
| Msa1265650 | Msa1432970 | 0.800745 | 1.247751e-48 | -8.615850e-47 |
| Msa1282260 | Msa1432970 | 0.801856 | 7.391041e-49 | -8.615850e-47 |
| Msa1303560 | Msa1432970 | 0.816074 | 6.668539e-52 | -8.615850e-47 |
| Msa1303650 | Msa1432970 | 0.820971 | 5.173869e-53 | -8.615850e-47 |
| Msa0436910 | Msa1432970 | 0.809172 | 2.157981e-50 | -8.615850e-47 |
| Msa0474520 | Msa1432970 | 0.812799 | 3.534083e-51 | -8.615850e-47 |
| Msa1003930 | Msa1432970 | 0.800444 | 1.437099e-48 | -8.615850e-47 |
| Msa1078820 | Msa1432970 | 0.806231 | 9.093765e-50 | -8.615850e-47 |
| Msa1078880 | Msa1432970 | 0.834159 | 3.520381e-56 | -8.615850e-47 |
| Msa1078970 | Msa1432970 | 0.843959 | 1.016817e-58 | -8.615850e-47 |
| Msa1090140 | Msa1432970 | 0.800659 | 1.299251e-48 | -8.615850e-47 |
| Msa0267110 | Msa1432970 | 0.801108 | 1.052000e-48 | -8.615850e-47 |
| Msa0270340 | Msa1432970 | 0.821792 | 3.344480e-53 | -8.615850e-47 |
| Msa1123970 | Msa1432970 | 0.807992 | 3.854638e-50 | -8.615850e-47 |
| Msa1169190 | Msa1432970 | 0.835601 | 1.526216e-56 | -8.615850e-47 |
| Msa1169650 | Msa1432970 | 0.803716 | 3.051980e-49 | -8.615850e-47 |
| Msa1186520 | Msa1432970 | 0.802910 | 4.482915e-49 | -8.615850e-47 |
| Msa1208950 | Msa1432970 | 0.815328 | 9.779272e-52 | -8.615850e-47 |
| Msa0580200 | Msa1432970 | 0.806727 | 7.149411e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432970 | MtrunA17_Chr1g0193431 | 97.415 | 735 | 19 | 0 | 1 | 735 | 1 | 735 | 0.0 | 1485 |
| Msa1432970 | MtrunA17_Chr1g0209631 | 32.470 | 502 | 322 | 7 | 225 | 710 | 269 | 769 | 2.08e-68 | 240 |
| Msa1432970 | MtrunA17_Chr8g0337411 | 26.457 | 223 | 133 | 7 | 227 | 428 | 55 | 267 | 1.42e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432970 | AT5G26710.1 | 73.029 | 723 | 182 | 5 | 8 | 729 | 6 | 716 | 0.0 | 1122 |
| Msa1432970 | AT1G25350.1 | 30.874 | 515 | 314 | 9 | 225 | 710 | 269 | 770 | 2.78e-65 | 232 |
| Msa1432970 | AT1G25350.2 | 29.231 | 520 | 321 | 10 | 225 | 710 | 269 | 775 | 9.82e-57 | 207 |
Find 196 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATAAGCAACCTTGTATT+TGG | 0.081771 | tig0027216:-17436 | Msa1432970:three_prime_UTR |
| TGAATGACAAGTTGGTAATT+TGG | 0.186865 | tig0027216:-17508 | Msa1432970:three_prime_UTR |
| GGCAAGCTTCTAAATCATTT+TGG | 0.193516 | tig0027216:+22182 | None:intergenic |
| CTTCTATGGTTTGTCCAAAA+TGG | 0.200426 | tig0027216:-19416 | Msa1432970:CDS |
| AACAGATGCACCACGAAATT+TGG | 0.212650 | tig0027216:+22252 | None:intergenic |
| TTGACGACTGGCTGGTCTTT+TGG | 0.223662 | tig0027216:+20259 | None:intergenic |
| ATACTTGTTCAACAATAAAT+TGG | 0.225280 | tig0027216:+19312 | None:intergenic |
| TTGAGGAGAATTTGAAATTA+TGG | 0.240284 | tig0027216:-19781 | Msa1432970:CDS |
| CTTCTCTACTTCCTTTACTA+TGG | 0.253996 | tig0027216:+18827 | None:intergenic |
| CAATTGCAGATCTAGCTATC+TGG | 0.284055 | tig0027216:-20866 | Msa1432970:CDS |
| ATGCTTAAGATTTCGCATAT+TGG | 0.287494 | tig0027216:+17670 | None:intergenic |
| TGGAGAGAATCCGGCGAGTT+TGG | 0.288324 | tig0027216:+22403 | None:intergenic |
| GGATGTTTCTGATAACATTA+AGG | 0.292494 | tig0027216:-20212 | Msa1432970:CDS |
| GTCAATAATCTTCTTATTGA+TGG | 0.298193 | tig0027216:+19073 | None:intergenic |
| TTACCTCATTACGAAGAAAA+AGG | 0.308169 | tig0027216:-18673 | Msa1432970:intron |
| TCAGCAAACGAAAGCTTCTA+TGG | 0.315812 | tig0027216:-19430 | Msa1432970:CDS |
| GCTATCTGGGCAGGTCTTGC+AGG | 0.316994 | tig0027216:-20852 | Msa1432970:intron |
| CGAATTTAGCCGGTTGAATA+TGG | 0.317857 | tig0027216:-19465 | Msa1432970:CDS |
| CCAATGCCTCATCATAGAAT+TGG | 0.320420 | tig0027216:-19647 | Msa1432970:CDS |
| AGAAATGTGGGGACGGAATC+AGG | 0.323152 | tig0027216:+22359 | None:intergenic |
| AGATTACTTCCCTGAGTTGA+TGG | 0.323642 | tig0027216:-19918 | Msa1432970:CDS |
| GCAACCCTTCCTAATTTCTA+TGG | 0.324310 | tig0027216:-22205 | Msa1432970:CDS |
| TGGAGAGAAAGGGATATTTC+AGG | 0.324909 | tig0027216:-17631 | Msa1432970:CDS |
| CGCAATGACAGCAGTGTGTC+TGG | 0.330957 | tig0027216:+19040 | None:intergenic |
| GATGTCTGCTGCCTGCCATC+TGG | 0.343011 | tig0027216:+17557 | None:intergenic |
| ATCGTAATGCTCAGTATTAC+AGG | 0.345722 | tig0027216:-19526 | Msa1432970:CDS |
| TGAAGATAGCCACTGGGTTC+AGG | 0.349425 | tig0027216:+20118 | None:intergenic |
| TCAAATTCTCCTCAACACTA+TGG | 0.354098 | tig0027216:+19789 | None:intergenic |
| AAGCTACCACATATACAAAA+AGG | 0.360107 | tig0027216:-18923 | Msa1432970:CDS |
| TTATAAGCAACCTTGTATTT+GGG | 0.373335 | tig0027216:-17435 | Msa1432970:three_prime_UTR |
| ATTAGTTAGCCTGACATTGA+TGG | 0.381393 | tig0027216:-18703 | Msa1432970:CDS |
| GCCGCCGCGCCACCGTTAGC+GGG | 0.385971 | tig0027216:-22437 | Msa1432970:CDS |
| GAAGTCACAGCAACATATAT+TGG | 0.387411 | tig0027216:-20316 | Msa1432970:CDS |
| CGCTAACGGTGGCGCGGCGG+CGG | 0.401265 | tig0027216:+22439 | None:intergenic |
| ACCCTGTGACATTCCCATCT+TGG | 0.408163 | tig0027216:+18802 | None:intergenic |
| TCATGGAATGGGACAAGCTC+TGG | 0.411380 | tig0027216:-19097 | Msa1432970:CDS |
| CGCCGCCGCGCCACCGTTAG+CGG | 0.413693 | tig0027216:-22438 | Msa1432970:CDS |
| GGAAGGGAGGTGTCGATGGA+TGG | 0.416190 | tig0027216:+22383 | None:intergenic |
| GGAAGTAACCTTGATGGATT+GGG | 0.417880 | tig0027216:-18856 | Msa1432970:CDS |
| ATAAAAGATGTTGAGACGTT+GGG | 0.418362 | tig0027216:-19971 | Msa1432970:CDS |
| AGTATTGCAGCTGGAGAGAA+AGG | 0.419290 | tig0027216:-17642 | Msa1432970:CDS |
| AGTTGGATACACTTTATACT+TGG | 0.420137 | tig0027216:+19622 | None:intergenic |
| CGGTGGCGCGGCGGCGGAGA+AGG | 0.420664 | tig0027216:+22445 | None:intergenic |
| CCACATTTCTCTTGTCCAAC+GGG | 0.422646 | tig0027216:-22346 | Msa1432970:intron |
| GATAAAGTAAAGAATGTGAA+TGG | 0.423094 | tig0027216:-20235 | Msa1432970:CDS |
| ACACGATTGGTTTCGAAGGC+CGG | 0.426191 | tig0027216:+17591 | None:intergenic |
| GGATCACGGAGTGATTTGTT+TGG | 0.426882 | tig0027216:+19689 | None:intergenic |
| GATGTTTCTGATAACATTAA+GGG | 0.428888 | tig0027216:-20211 | Msa1432970:CDS |
| GAATGCCAAACAGTGCCATC+AGG | 0.433961 | tig0027216:-17333 | Msa1432970:three_prime_UTR |
| AATTCATTACTTTCTTTAGC+AGG | 0.435143 | tig0027216:+20007 | None:intergenic |
| AAAATGGAAAAGTTGAATCA+TGG | 0.436219 | tig0027216:-19400 | Msa1432970:CDS |
| AGGAAGTAACCTTGATGGAT+TGG | 0.439791 | tig0027216:-18857 | Msa1432970:CDS |
| GGTAATTTGGATAGCTATTG+TGG | 0.450186 | tig0027216:-17495 | Msa1432970:three_prime_UTR |
| GATCTTCCAGCTGCTGAAGT+TGG | 0.450726 | tig0027216:-20163 | Msa1432970:CDS |
| AAATGATTTAGAAGCTTGCC+AGG | 0.451118 | tig0027216:-22179 | Msa1432970:intron |
| CCACAAAACTGAAGCTCACT+TGG | 0.452027 | tig0027216:-18743 | Msa1432970:CDS |
| CTTCCCTGAGTTGATGGAAC+TGG | 0.453446 | tig0027216:-19912 | Msa1432970:CDS |
| TTATGGAAGGAAATGATTGC+AGG | 0.457763 | tig0027216:-19764 | Msa1432970:CDS |
| GTCGATGGATGGAGAGAATC+CGG | 0.460388 | tig0027216:+22394 | None:intergenic |
| ATAAAGTAAAGAATGTGAAT+GGG | 0.460399 | tig0027216:-20234 | Msa1432970:CDS |
| AAATCTCAATCTCATGGAAT+GGG | 0.463289 | tig0027216:-19108 | Msa1432970:CDS |
| GGATTGCAACGATAATAAAC+AGG | 0.467261 | tig0027216:+19668 | None:intergenic |
| CAAGTATATTGATGACTACT+TGG | 0.468006 | tig0027216:-20922 | Msa1432970:CDS |
| GATAAAAGATGTTGAGACGT+TGG | 0.468506 | tig0027216:-19972 | Msa1432970:CDS |
| GCAGTGTGTCTGGGACATAC+AGG | 0.469189 | tig0027216:+19050 | None:intergenic |
| CAATGCCTCATCATAGAATT+GGG | 0.472137 | tig0027216:-19646 | Msa1432970:CDS |
| AAAATCTCAATCTCATGGAA+TGG | 0.472161 | tig0027216:-19109 | Msa1432970:CDS |
| TAAAGAAAGTAATGAATTTG+TGG | 0.474527 | tig0027216:-20002 | Msa1432970:CDS |
| TTCTCATCTACGAATTTAGC+CGG | 0.482987 | tig0027216:-19475 | Msa1432970:CDS |
| GGACAAGCAAAATCATAAGT+TGG | 0.483435 | tig0027216:+19605 | None:intergenic |
| ATGTCTGCTGCCTGCCATCT+GGG | 0.485977 | tig0027216:+17558 | None:intergenic |
| ACAAATGCAAAAGGAGAGAA+TGG | 0.487392 | tig0027216:-19837 | Msa1432970:CDS |
| GCGCGGCGGCGGAGAAGGAA+AGG | 0.489164 | tig0027216:+22450 | None:intergenic |
| CCCACATTTCTCTTGTCCAA+CGG | 0.491225 | tig0027216:-22347 | Msa1432970:CDS |
| AATTGCAGATCTAGCTATCT+GGG | 0.493842 | tig0027216:-20865 | Msa1432970:CDS |
| CGGTGAGGAAGTAACCTTGA+TGG | 0.493936 | tig0027216:-18862 | Msa1432970:CDS |
| AATGCCCTGATGGCACTGTT+TGG | 0.495372 | tig0027216:+17328 | None:intergenic |
| CTTTGTTTGCAGCTTGAGGA+AGG | 0.496246 | tig0027216:-17755 | Msa1432970:intron |
| TGCTGAACGATACCAAGGTC+AGG | 0.500013 | tig0027216:-20056 | Msa1432970:CDS |
| TATGCACCTGTACTCTCATC+AGG | 0.500252 | tig0027216:-20966 | Msa1432970:CDS |
| GACCAAGATGGGAATGTCAC+AGG | 0.501663 | tig0027216:-18804 | Msa1432970:CDS |
| TCCAATGTGAAGATAGCCAC+TGG | 0.503003 | tig0027216:+20111 | None:intergenic |
| GCTTTGTGCACTGTGCTGCT+AGG | 0.504330 | tig0027216:+22507 | None:intergenic |
| GAGTGTAGACCATATTCAAC+CGG | 0.504461 | tig0027216:+19456 | None:intergenic |
| AATACTGAGCATTACGATCA+TGG | 0.505401 | tig0027216:+19531 | None:intergenic |
| GGGATTGCAAATAACACGAT+TGG | 0.508386 | tig0027216:+17578 | None:intergenic |
| CCTTCATGAGCATCAACAAA+TGG | 0.508448 | tig0027216:+19584 | None:intergenic |
| ATGCGGACAAATGATTTCTC+AGG | 0.508905 | tig0027216:+18984 | None:intergenic |
| TTTCAGGTGCTGGAAAGAGA+TGG | 0.510988 | tig0027216:-20423 | Msa1432970:intron |
| AATCAAACTCCATCAATGTC+AGG | 0.511094 | tig0027216:+18694 | None:intergenic |
| TCAGCCAGTTCCATCAACTC+AGG | 0.512208 | tig0027216:+19908 | None:intergenic |
| AAATGGAAAAGTTGAATCAT+GGG | 0.512472 | tig0027216:-19399 | Msa1432970:CDS |
| CTTTATCCTTGACGACTGGC+TGG | 0.513178 | tig0027216:+20251 | None:intergenic |
| GACGGAATCAGGAGGAAGGG+AGG | 0.514373 | tig0027216:+22370 | None:intergenic |
| AAAATTAATTAGCCAGGGTA+AGG | 0.515011 | tig0027216:-19885 | Msa1432970:CDS |
| CCAATTCTATGATGAGGCAT+TGG | 0.515257 | tig0027216:+19647 | None:intergenic |
| GGCATTTCCCCAATCCATCA+AGG | 0.517350 | tig0027216:+18848 | None:intergenic |
| GGAGAATTTGAAATTATGGA+AGG | 0.519163 | tig0027216:-19777 | Msa1432970:CDS |
| TCCACGTGAACAAATGCAAA+AGG | 0.523875 | tig0027216:-19846 | Msa1432970:CDS |
| AAGGTATCACTCATGCCCTT+CGG | 0.526418 | tig0027216:-19565 | Msa1432970:CDS |
| TTCAGGTGCTGGAAAGAGAT+GGG | 0.528173 | tig0027216:-20422 | Msa1432970:intron |
| GGTGTGATGTACCCTTCGTC+CGG | 0.530625 | tig0027216:-17610 | Msa1432970:CDS |
| CCATTTGTTGATGCTCATGA+AGG | 0.530665 | tig0027216:-19584 | Msa1432970:CDS |
| TTTACTTTATCCTTGACGAC+TGG | 0.533066 | tig0027216:+20247 | None:intergenic |
| TGGGGACGGAATCAGGAGGA+AGG | 0.533685 | tig0027216:+22366 | None:intergenic |
| CGTAACAGCTCCAAATTTCG+TGG | 0.533760 | tig0027216:-22262 | Msa1432970:intron |
| AAAGCGAGCGACGACGAAGA+TGG | 0.535393 | tig0027216:-22489 | Msa1432970:exon |
| CATAGTAAAGGAAGTAGAGA+AGG | 0.535865 | tig0027216:-18826 | Msa1432970:CDS |
| GCATGGAGAAGTATTGCAGC+TGG | 0.537955 | tig0027216:-17651 | Msa1432970:CDS |
| GGGAATGTCACAGGGTTAAG+TGG | 0.540528 | tig0027216:-18795 | Msa1432970:CDS |
| TTACAGGATTCAAGCGGACA+TGG | 0.540764 | tig0027216:-19510 | Msa1432970:CDS |
| TCTGATAACATTAAGGGAGG+AGG | 0.541928 | tig0027216:-20205 | Msa1432970:CDS |
| CAGCCAGTTCCATCAACTCA+GGG | 0.544119 | tig0027216:+19909 | None:intergenic |
| GAAGTAGAGAAGGACCAAGA+TGG | 0.544215 | tig0027216:-18816 | Msa1432970:CDS |
| AAGTAGAGAAGGACCAAGAT+GGG | 0.546780 | tig0027216:-18815 | Msa1432970:CDS |
| AGGAGGAAGGGAGGTGTCGA+TGG | 0.549519 | tig0027216:+22379 | None:intergenic |
| TATTTGCAATCCCAGATGGC+AGG | 0.556570 | tig0027216:-17568 | Msa1432970:CDS |
| GACGCAGAGTCTGTATCAGC+CGG | 0.557290 | tig0027216:-18882 | Msa1432970:CDS |
| CGCGGCGGCGGAGAAGGAAA+GGG | 0.557658 | tig0027216:+22451 | None:intergenic |
| GTGTTATTTGCAATCCCAGA+TGG | 0.560737 | tig0027216:-17572 | Msa1432970:CDS |
| CCCCGCTAACGGTGGCGCGG+CGG | 0.562116 | tig0027216:+22436 | None:intergenic |
| ATGCAAAAGGAGAGAATGGA+TGG | 0.562327 | tig0027216:-19833 | Msa1432970:CDS |
| GCAGATCTAGCTATCTGGGC+AGG | 0.563032 | tig0027216:-20861 | Msa1432970:CDS |
| TAAGGGAGGAGGCAAGCCTT+CGG | 0.564581 | tig0027216:-20194 | Msa1432970:CDS |
| GGTTTGCAGTGTTGTGTCCG+TGG | 0.564738 | tig0027216:-19731 | Msa1432970:CDS |
| TCTGTTCTTCTGCGTCACAT+TGG | 0.564916 | tig0027216:-22235 | Msa1432970:CDS |
| AATATGCGAAATCTTAAGCA+TGG | 0.566056 | tig0027216:-17668 | Msa1432970:CDS |
| CGCACAATTCCTTGCACTGT+AGG | 0.569571 | tig0027216:+19362 | None:intergenic |
| CTAACTAATTCATCTAACTC+AGG | 0.576697 | tig0027216:+18717 | None:intergenic |
| TTTGGCCATAGAAATTAGGA+AGG | 0.578574 | tig0027216:+22200 | None:intergenic |
| TTGGGGAAATGCCATAGTAA+AGG | 0.578640 | tig0027216:-18838 | Msa1432970:CDS |
| GCAGGGCCTGATGAGAGTAC+AGG | 0.580273 | tig0027216:+20960 | None:intergenic |
| CCGTTGGACAAGAGAAATGT+GGG | 0.580974 | tig0027216:+22347 | None:intergenic |
| GATGCGGCAATCCCCGCTAA+CGG | 0.581791 | tig0027216:+22425 | None:intergenic |
| CCACGATTTCCTACAGTGCA+AGG | 0.583620 | tig0027216:-19371 | Msa1432970:CDS |
| GTGTTGTGTCCGTGGGAAGT+TGG | 0.586102 | tig0027216:-19723 | Msa1432970:CDS |
| GTTTGCAGTGTTGTGTCCGT+GGG | 0.587122 | tig0027216:-19730 | Msa1432970:CDS |
| CATCAAGGTTACTTCCTCAC+CGG | 0.589044 | tig0027216:+18863 | None:intergenic |
| TAAGCATAACACTGAAGTGA+TGG | 0.589894 | tig0027216:+17455 | None:intergenic |
| GGTTTCGAAGGCCGGACGAA+GGG | 0.590280 | tig0027216:+17599 | None:intergenic |
| ATGGTATTCACTTGACCGAA+GGG | 0.592206 | tig0027216:+19550 | None:intergenic |
| CCTTGCACTGTAGGAAATCG+TGG | 0.592445 | tig0027216:+19371 | None:intergenic |
| AACGCAAAATAACCTGACCT+TGG | 0.594893 | tig0027216:+20044 | None:intergenic |
| GAATCCGGCGAGTTTGGATG+CGG | 0.595497 | tig0027216:+22409 | None:intergenic |
| GCGGCAATCCCCGCTAACGG+TGG | 0.596574 | tig0027216:+22428 | None:intergenic |
| AATGCCAAACAGTGCCATCA+GGG | 0.596860 | tig0027216:-17332 | Msa1432970:three_prime_UTR |
| TTTGCAGCTTGAGGAAGGAG+AGG | 0.597573 | tig0027216:-17750 | Msa1432970:intron |
| CCCGTTGGACAAGAGAAATG+TGG | 0.597812 | tig0027216:+22346 | None:intergenic |
| CCGCCGCGCCACCGTTAGCG+GGG | 0.597972 | tig0027216:-22436 | Msa1432970:CDS |
| TAAAAGATGTTGAGACGTTG+GGG | 0.598165 | tig0027216:-19970 | Msa1432970:CDS |
| TAGTCGAGAACCCAAATACA+AGG | 0.598935 | tig0027216:+17425 | None:intergenic |
| AATAACACGATTGGTTTCGA+AGG | 0.600160 | tig0027216:+17587 | None:intergenic |
| GCAATGACAGCAGTGTGTCT+GGG | 0.600339 | tig0027216:+19041 | None:intergenic |
| CCCAGTGGCTATCTTCACAT+TGG | 0.601813 | tig0027216:-20112 | Msa1432970:CDS |
| GAAAGAGATGGGAAAGCTTG+AGG | 0.602516 | tig0027216:-20411 | Msa1432970:CDS |
| TTGCTTAATCAATGCCCTGA+TGG | 0.602743 | tig0027216:+17318 | None:intergenic |
| CATTTGTCCGCATCATACCT+AGG | 0.604356 | tig0027216:-18974 | Msa1432970:CDS |
| TACAGGATTCAAGCGGACAT+GGG | 0.604672 | tig0027216:-19509 | Msa1432970:CDS |
| TAAAGTAAAGAATGTGAATG+GGG | 0.604831 | tig0027216:-20233 | Msa1432970:CDS |
| AATGATTGCAGGATCAGAGA+GGG | 0.606663 | tig0027216:-19753 | Msa1432970:CDS |
| AAAAGACCAGCCAGTCGTCA+AGG | 0.611058 | tig0027216:-20257 | Msa1432970:CDS |
| ATGCAGAAACCATAGTGTTG+AGG | 0.612137 | tig0027216:-19798 | Msa1432970:CDS |
| CATGGTATTCACTTGACCGA+AGG | 0.616177 | tig0027216:+19549 | None:intergenic |
| AATCCCCGCTAACGGTGGCG+CGG | 0.617124 | tig0027216:+22433 | None:intergenic |
| CAGTGTGTCTGGGACATACA+GGG | 0.618476 | tig0027216:+19051 | None:intergenic |
| GTATTGCAGCTGGAGAGAAA+GGG | 0.620537 | tig0027216:-17641 | Msa1432970:CDS |
| GGACAAGAGAAATGTGGGGA+CGG | 0.620645 | tig0027216:+22352 | None:intergenic |
| CGGTTTGCACCTGAACCCAG+TGG | 0.631994 | tig0027216:-20127 | Msa1432970:CDS |
| TGGTTTCGAAGGCCGGACGA+AGG | 0.632020 | tig0027216:+17598 | None:intergenic |
| TTGGACCCAATTCTATGATG+AGG | 0.632796 | tig0027216:+19641 | None:intergenic |
| GTATTGTTAACCCTCACTGA+TGG | 0.633663 | tig0027216:-19008 | Msa1432970:CDS |
| GGGGACGGAATCAGGAGGAA+GGG | 0.638859 | tig0027216:+22367 | None:intergenic |
| AATTCAATAGTTGCAGAACA+TGG | 0.639406 | tig0027216:-20352 | Msa1432970:CDS |
| ACCAAGATGGGAATGTCACA+GGG | 0.639741 | tig0027216:-18803 | Msa1432970:CDS |
| GTTTCTGATAACATTAAGGG+AGG | 0.642874 | tig0027216:-20208 | Msa1432970:CDS |
| TTGGCCATAGAAATTAGGAA+GGG | 0.643057 | tig0027216:+22201 | None:intergenic |
| CAGACACACTGCTGTCATTG+CGG | 0.643126 | tig0027216:-19039 | Msa1432970:CDS |
| CCAATGTGAAGATAGCCACT+GGG | 0.643680 | tig0027216:+20112 | None:intergenic |
| ATTGCCGCATCCAAACTCGC+CGG | 0.645208 | tig0027216:-22413 | Msa1432970:CDS |
| AAGTTGGAAAAGTTCGCTTG+CGG | 0.645603 | tig0027216:-20147 | Msa1432970:CDS |
| CATCAACATACGCCTTACCC+TGG | 0.646586 | tig0027216:+19873 | None:intergenic |
| CTTGCATATCCAACTTCCCA+CGG | 0.647797 | tig0027216:+19714 | None:intergenic |
| AACGATAATAAACAGGATCA+CGG | 0.648773 | tig0027216:+19675 | None:intergenic |
| TTTCTCAGGACCATCAGTGA+GGG | 0.655675 | tig0027216:+18998 | None:intergenic |
| GGAAGATCTATCTCTGCCGA+AGG | 0.658068 | tig0027216:+20178 | None:intergenic |
| GAAGTAACCTTGATGGATTG+GGG | 0.667338 | tig0027216:-18855 | Msa1432970:CDS |
| AGAGTCTGTATCAGCCGGTG+AGG | 0.670511 | tig0027216:-18877 | Msa1432970:CDS |
| GTGCAAGGAATTGTGCGTAG+AGG | 0.676449 | tig0027216:-19356 | Msa1432970:CDS |
| ATGATTGCAGGATCAGAGAG+GGG | 0.677471 | tig0027216:-19752 | Msa1432970:CDS |
| ATTTCTCAGGACCATCAGTG+AGG | 0.679162 | tig0027216:+18997 | None:intergenic |
| AATATCAAAATCTTGCACGA+TGG | 0.684460 | tig0027216:-20378 | Msa1432970:CDS |
| AAATGATTGCAGGATCAGAG+AGG | 0.689429 | tig0027216:-19754 | Msa1432970:CDS |
| TCAGTATTACAGGATTCAAG+CGG | 0.711357 | tig0027216:-19516 | Msa1432970:CDS |
| AATGTGGGGACGGAATCAGG+AGG | 0.727109 | tig0027216:+22362 | None:intergenic |
| AAAAGATGTTGAGACGTTGG+GGG | 0.753350 | tig0027216:-19969 | Msa1432970:CDS |
| CGTTGGACAAGAGAAATGTG+GGG | 0.758677 | tig0027216:+22348 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTCTTATAACATATA+TGG | + | tig0027216:21664-21683 | None:intergenic | 10.0% |
| !!! | ATAAAAAAAGTTACTTATTT+TGG | + | tig0027216:22491-22510 | None:intergenic | 10.0% |
| !! | AAAATTCAATTAAGATTACA+GGG | + | tig0027216:18056-18075 | None:intergenic | 15.0% |
| !! | AAAAATTCAATTAAGATTAC+AGG | + | tig0027216:18057-18076 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTTTACACCAAA+CGG | - | tig0027216:18197-18216 | Msa1432970:intron | 15.0% |
| !!! | TTTAATGTATTTCTTTTGAT+TGG | - | tig0027216:21194-21213 | Msa1432970:intron | 15.0% |
| !! | TTTCAAATAAAAATGAGATA+AGG | + | tig0027216:21854-21873 | None:intergenic | 15.0% |
| !!! | GTCAAATTAAAGATTTTTAG+TGG | - | tig0027216:17639-17658 | Msa1432970:CDS | 20.0% |
| !!! | GATAGAGTTTTTAATTGTTA+AGG | - | tig0027216:17700-17719 | Msa1432970:CDS | 20.0% |
| !! | ATATATATATTAAGCTCACT+AGG | + | tig0027216:17761-17780 | None:intergenic | 20.0% |
| !! | GTGAGCTTAATATATATATA+AGG | - | tig0027216:17762-17781 | Msa1432970:intron | 20.0% |
| !!! | GTACTCTTCAATTTTTTTTT+GGG | + | tig0027216:17813-17832 | None:intergenic | 20.0% |
| !!! | AGTACTCTTCAATTTTTTTT+TGG | + | tig0027216:17814-17833 | None:intergenic | 20.0% |
| !! | ATGATAAGCATTTATGTATA+AGG | - | tig0027216:17838-17857 | Msa1432970:intron | 20.0% |
| !! | TGATAAGCATTTATGTATAA+GGG | - | tig0027216:17839-17858 | Msa1432970:intron | 20.0% |
| !!! | TAGTTAACTTGTTTTTGTAT+AGG | - | tig0027216:18253-18272 | Msa1432970:intron | 20.0% |
| !! | ATCAATCAATCAATCAATTT+GGG | + | tig0027216:18586-18605 | None:intergenic | 20.0% |
| !! | AATCAATCAATCAATCAATT+TGG | + | tig0027216:18587-18606 | None:intergenic | 20.0% |
| !! | AAAAAAAAACAATTGCATGA+CGG | + | tig0027216:18747-18766 | None:intergenic | 20.0% |
| !!! | TTTAATTTCATTATAGTCTG+TGG | - | tig0027216:19213-19232 | Msa1432970:intron | 20.0% |
| !! | ATAAAGTAAAGAATGTGAAT+GGG | - | tig0027216:19549-19568 | Msa1432970:CDS | 20.0% |
| !! | TAAAGAAAGTAATGAATTTG+TGG | - | tig0027216:19781-19800 | Msa1432970:CDS | 20.0% |
| !! | ATACTTGTTCAACAATAAAT+TGG | + | tig0027216:20474-20493 | None:intergenic | 20.0% |
| !! | ATAAGAAATACAGTAGAATA+TGG | - | tig0027216:20550-20569 | Msa1432970:intron | 20.0% |
| !!! | TTTGTTTCTGTCATTAATAA+AGG | - | tig0027216:21150-21169 | Msa1432970:intron | 20.0% |
| !! | AATTGCACTTCATTAATATT+GGG | - | tig0027216:21249-21268 | Msa1432970:intron | 20.0% |
| !! | AGCAAATATAAACTTAAACA+GGG | + | tig0027216:22010-22029 | None:intergenic | 20.0% |
| !! | AAGCAAATATAAACTTAAAC+AGG | + | tig0027216:22011-22030 | None:intergenic | 20.0% |
| !!! | TGAATATATTCTGTTTTTTG+TGG | - | tig0027216:22385-22404 | Msa1432970:CDS | 20.0% |
| ! | ATTAATAGATCATAGAAACG+AGG | + | tig0027216:17487-17506 | None:intergenic | 25.0% |
| !! | TTGACTGAAAAAAACTTGTT+TGG | - | tig0027216:17915-17934 | Msa1432970:intron | 25.0% |
| ! | TTGAATGAATATGTAGTGTT+TGG | + | tig0027216:18151-18170 | None:intergenic | 25.0% |
| !! | TATGATATTTCTGTAGTTCA+AGG | + | tig0027216:18492-18511 | None:intergenic | 25.0% |
| ! | TTGATTGATTGATTGACAAT+AGG | - | tig0027216:18593-18612 | Msa1432970:intron | 25.0% |
| ! | TTTACTTATTTCCTCTTTCT+TGG | - | tig0027216:18767-18786 | Msa1432970:CDS | 25.0% |
| ! | ACAACAATAATCTATTGTTG+TGG | - | tig0027216:19178-19197 | Msa1432970:intron | 25.0% |
| !! | TCTTCTATTTCTCTATTCTT+TGG | - | tig0027216:19259-19278 | Msa1432970:intron | 25.0% |
| ! | GATAAAGTAAAGAATGTGAA+TGG | - | tig0027216:19548-19567 | Msa1432970:CDS | 25.0% |
| ! | TAAAGTAAAGAATGTGAATG+GGG | - | tig0027216:19550-19569 | Msa1432970:CDS | 25.0% |
| !! | GATGTTTCTGATAACATTAA+GGG | - | tig0027216:19572-19591 | Msa1432970:CDS | 25.0% |
| ! | AATTCATTACTTTCTTTAGC+AGG | + | tig0027216:19779-19798 | None:intergenic | 25.0% |
| !! | TTGAGGAGAATTTGAAATTA+TGG | - | tig0027216:20002-20021 | Msa1432970:CDS | 25.0% |
| !! | ATGATTCAACTTTTCCATTT+TGG | + | tig0027216:20384-20403 | None:intergenic | 25.0% |
| ! | AAAATGGAAAAGTTGAATCA+TGG | - | tig0027216:20383-20402 | Msa1432970:CDS | 25.0% |
| ! | AAATGGAAAAGTTGAATCAT+GGG | - | tig0027216:20384-20403 | Msa1432970:CDS | 25.0% |
| ! | ATCAAAAAATCTCAATCTCA+TGG | - | tig0027216:20669-20688 | Msa1432970:intron | 25.0% |
| ! | GTCAATAATCTTCTTATTGA+TGG | + | tig0027216:20713-20732 | None:intergenic | 25.0% |
| ! | GAATTGCACTTCATTAATAT+TGG | - | tig0027216:21248-21267 | Msa1432970:intron | 25.0% |
| !!! | AAGATCAAATAAGAAGTGTT+AGG | + | tig0027216:21310-21329 | None:intergenic | 25.0% |
| ! | GTGTAAACACAAAATTATAC+AGG | + | tig0027216:21369-21388 | None:intergenic | 25.0% |
| ! | GGATATTTGTTTATACTGTA+AGG | - | tig0027216:21615-21634 | Msa1432970:intron | 25.0% |
| !!! | TTTGTTTTTGAATGACAAGT+TGG | - | tig0027216:22267-22286 | Msa1432970:intron | 25.0% |
| ! | TTATAAGCAACCTTGTATTT+GGG | - | tig0027216:22348-22367 | Msa1432970:CDS | 25.0% |
| !!! | GTGAACTTGTTATTTTAGTT+TGG | - | tig0027216:22426-22445 | Msa1432970:CDS | 25.0% |
| !! | TCATTTTGGCCATAGAAATT+AGG | + | tig0027216:17590-17609 | None:intergenic | 30.0% |
| TTTGACAAAAACATCTAACC+TGG | + | tig0027216:17625-17644 | None:intergenic | 30.0% | |
| TCTATAATAAGCTGCAAACA+TGG | + | tig0027216:17726-17745 | None:intergenic | 30.0% | |
| !!! | CTCTTCAATTTTTTTTTGGG+TGG | + | tig0027216:17810-17829 | None:intergenic | 30.0% |
| TTTATGTATAAGGGTCTGTT+CGG | - | tig0027216:17848-17867 | Msa1432970:intron | 30.0% | |
| GTAGTGTTTGGTAAAATTAG+CGG | + | tig0027216:18139-18158 | None:intergenic | 30.0% | |
| !! | CGTTTGCTATAGAAATAGTT+AGG | + | tig0027216:18225-18244 | None:intergenic | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | tig0027216:18282-18301 | Msa1432970:intron | 30.0% |
| ! | GCTTATTTGAGTTTATCTAC+TGG | + | tig0027216:18398-18417 | None:intergenic | 30.0% |
| TATTTACTGCTTGTTTGGAT+TGG | + | tig0027216:18420-18439 | None:intergenic | 30.0% | |
| AGCAATATTTACTGCTTGTT+TGG | + | tig0027216:18425-18444 | None:intergenic | 30.0% | |
| TCCTTGGTTTCTTTCAAAAT+AGG | - | tig0027216:18542-18561 | Msa1432970:intron | 30.0% | |
| !! | TCCTATTTTGAAAGAAACCA+AGG | + | tig0027216:18546-18565 | None:intergenic | 30.0% |
| AATAGGAGAGTGATAGTTTA+AGG | - | tig0027216:18559-18578 | Msa1432970:intron | 30.0% | |
| TGATTGATTGACAATAGGTT+AGG | - | tig0027216:18598-18617 | Msa1432970:intron | 30.0% | |
| GATTGATTGACAATAGGTTA+GGG | - | tig0027216:18599-18618 | Msa1432970:intron | 30.0% | |
| TAGTTCAGTGACAAAATTTG+AGG | - | tig0027216:18641-18660 | Msa1432970:intron | 30.0% | |
| AGTTCAGTGACAAAATTTGA+GGG | - | tig0027216:18642-18661 | Msa1432970:intron | 30.0% | |
| TTGTTTAGGGATCAAATTGA+AGG | - | tig0027216:18672-18691 | Msa1432970:intron | 30.0% | |
| ACAACTAACAAAAGAAACAC+CGG | + | tig0027216:18702-18721 | None:intergenic | 30.0% | |
| !!! | TGTTAGTTGTTGTTTGCTTT+TGG | - | tig0027216:18712-18731 | Msa1432970:CDS | 30.0% |
| ! | CAAGTATATTGATGACTACT+TGG | - | tig0027216:18861-18880 | Msa1432970:CDS | 30.0% |
| AGGTAAAGTTGAATAGGTAT+AGG | + | tig0027216:18976-18995 | None:intergenic | 30.0% | |
| TATCACAGGTAAAGTTGAAT+AGG | + | tig0027216:18982-19001 | None:intergenic | 30.0% | |
| ! | TCTTTTAAACATCCTTCCTA+TGG | - | tig0027216:19015-19034 | Msa1432970:CDS | 30.0% |
| ! | TGTTTAGTGATTGCATTTTG+TGG | - | tig0027216:19057-19076 | Msa1432970:CDS | 30.0% |
| TGCAAGCTATATTCCATATA+AGG | + | tig0027216:19124-19143 | None:intergenic | 30.0% | |
| CCATCAAGTTTCATAGATTA+AGG | + | tig0027216:19311-19330 | None:intergenic | 30.0% | |
| CCTTAATCTATGAAACTTGA+TGG | - | tig0027216:19308-19327 | Msa1432970:intron | 30.0% | |
| AATATCAAAATCTTGCACGA+TGG | - | tig0027216:19405-19424 | Msa1432970:CDS | 30.0% | |
| AATTCAATAGTTGCAGAACA+TGG | - | tig0027216:19431-19450 | Msa1432970:CDS | 30.0% | |
| GCAACATATATTGGCAAAAA+AGG | - | tig0027216:19476-19495 | Msa1432970:CDS | 30.0% | |
| ATATATTGGCAAAAAAGGAG+TGG | - | tig0027216:19481-19500 | Msa1432970:CDS | 30.0% | |
| TATATTGGCAAAAAAGGAGT+GGG | - | tig0027216:19482-19501 | Msa1432970:CDS | 30.0% | |
| ! | GGATGTTTCTGATAACATTA+AGG | - | tig0027216:19571-19590 | Msa1432970:CDS | 30.0% |
| ATAAAAGATGTTGAGACGTT+GGG | - | tig0027216:19812-19831 | Msa1432970:CDS | 30.0% | |
| GCTGAAAAATTAATTAGCCA+GGG | - | tig0027216:19893-19912 | Msa1432970:CDS | 30.0% | |
| AAAATTAATTAGCCAGGGTA+AGG | - | tig0027216:19898-19917 | Msa1432970:CDS | 30.0% | |
| ! | GGAGAATTTGAAATTATGGA+AGG | - | tig0027216:20006-20025 | Msa1432970:CDS | 30.0% |
| AACGATAATAAACAGGATCA+CGG | + | tig0027216:20111-20130 | None:intergenic | 30.0% | |
| AGTTGGATACACTTTATACT+TGG | + | tig0027216:20164-20183 | None:intergenic | 30.0% | |
| TTGTTGAACAAGTATGTACA+AGG | - | tig0027216:20479-20498 | Msa1432970:intron | 30.0% | |
| AGCATGGATATACAACAAAA+AGG | + | tig0027216:20609-20628 | None:intergenic | 30.0% | |
| ! | AGTGATCAACATTTTAAGCA+TGG | + | tig0027216:20625-20644 | None:intergenic | 30.0% |
| AAAATCTCAATCTCATGGAA+TGG | - | tig0027216:20674-20693 | Msa1432970:intron | 30.0% | |
| AAATCTCAATCTCATGGAAT+GGG | - | tig0027216:20675-20694 | Msa1432970:intron | 30.0% | |
| AAGCTACCACATATACAAAA+AGG | - | tig0027216:20860-20879 | Msa1432970:CDS | 30.0% | |
| ! | CCATATCCTTTTTGTATATG+TGG | + | tig0027216:20869-20888 | None:intergenic | 30.0% |
| CCACATATACAAAAAGGATA+TGG | - | tig0027216:20866-20885 | Msa1432970:CDS | 30.0% | |
| CTAACTAATTCATCTAACTC+AGG | + | tig0027216:21069-21088 | None:intergenic | 30.0% | |
| TTACCTCATTACGAAGAAAA+AGG | - | tig0027216:21110-21129 | Msa1432970:intron | 30.0% | |
| ! | ATACCTTTTTCTTCGTAATG+AGG | + | tig0027216:21116-21135 | None:intergenic | 30.0% |
| CATTGCATTATCTATCCATT+TGG | - | tig0027216:21343-21362 | Msa1432970:intron | 30.0% | |
| ACAAAATTATACAGGCCAAA+TGG | + | tig0027216:21361-21380 | None:intergenic | 30.0% | |
| !! | GATTAGTTTCTTATCCTTTG+CGG | + | tig0027216:21434-21453 | None:intergenic | 30.0% |
| AAATTAAAGCCAAGGCTTAT+TGG | + | tig0027216:21565-21584 | None:intergenic | 30.0% | |
| TATAAAACTAGTTCCATGGA+AGG | + | tig0027216:21715-21734 | None:intergenic | 30.0% | |
| GGACAATAATAAGGACAATA+TGG | + | tig0027216:21741-21760 | None:intergenic | 30.0% | |
| TATGTACTTTCAAGAGAATG+GGG | + | tig0027216:21771-21790 | None:intergenic | 30.0% | |
| GTATGTACTTTCAAGAGAAT+GGG | + | tig0027216:21772-21791 | None:intergenic | 30.0% | |
| TTTGCTTCAGTGTTAAGTAT+TGG | - | tig0027216:21807-21826 | Msa1432970:intron | 30.0% | |
| TGGGATTAGGTATATACATA+AGG | + | tig0027216:21895-21914 | None:intergenic | 30.0% | |
| ! | AACCAAAGTGTCTATTCATA+GGG | + | tig0027216:21936-21955 | None:intergenic | 30.0% |
| ATGCTTAAGATTTCGCATAT+TGG | + | tig0027216:22116-22135 | None:intergenic | 30.0% | |
| AATATGCGAAATCTTAAGCA+TGG | - | tig0027216:22115-22134 | Msa1432970:intron | 30.0% | |
| !! | TGAATGACAAGTTGGTAATT+TGG | - | tig0027216:22275-22294 | Msa1432970:intron | 30.0% |
| CTTATAAGCAACCTTGTATT+TGG | - | tig0027216:22347-22366 | Msa1432970:CDS | 30.0% | |
| ! | TCAAGACTAGAGTGAGTTTT+CGG | + | tig0027216:17256-17275 | None:intergenic | 35.0% |
| ACGAGGAAAAGATATGAGAA+AGG | + | tig0027216:17470-17489 | None:intergenic | 35.0% | |
| TTGGCCATAGAAATTAGGAA+GGG | + | tig0027216:17585-17604 | None:intergenic | 35.0% | |
| TTTGGCCATAGAAATTAGGA+AGG | + | tig0027216:17586-17605 | None:intergenic | 35.0% | |
| ! | GGCAAGCTTCTAAATCATTT+TGG | + | tig0027216:17604-17623 | None:intergenic | 35.0% |
| AAATGATTTAGAAGCTTGCC+AGG | - | tig0027216:17604-17623 | Msa1432970:CDS | 35.0% | |
| TGAATAAGTGATGTTGTCGA+AGG | - | tig0027216:17678-17697 | Msa1432970:CDS | 35.0% | |
| !!! | ATTTTTTTTTGGGTGGTGTC+CGG | + | tig0027216:17803-17822 | None:intergenic | 35.0% |
| ATAAGCTTGTGAGAAAGTGA+TGG | + | tig0027216:17944-17963 | None:intergenic | 35.0% | |
| !! | GCTATAAGCTTTAAGCTAGT+TGG | + | tig0027216:18009-18028 | None:intergenic | 35.0% |
| CTTAAGTGAACCTTCAATCT+GGG | - | tig0027216:18443-18462 | Msa1432970:intron | 35.0% | |
| ATCGAGAATAGTTTCAAGAC+TGG | + | tig0027216:18516-18535 | None:intergenic | 35.0% | |
| TATTCTCGATAGTTAGTCCT+TGG | - | tig0027216:18526-18545 | Msa1432970:intron | 35.0% | |
| ATCTGAAAAGTCCAAGAAAG+AGG | + | tig0027216:18781-18800 | None:intergenic | 35.0% | |
| ! | TGCATCCATTTTCAAAAGCA+GGG | + | tig0027216:18843-18862 | None:intergenic | 35.0% |
| ! | TTGCATCCATTTTCAAAAGC+AGG | + | tig0027216:18844-18863 | None:intergenic | 35.0% |
| !!! | GAGAAGCGTACATTTTTAGT+TGG | - | tig0027216:18883-18902 | Msa1432970:CDS | 35.0% |
| AATTGCAGATCTAGCTATCT+GGG | - | tig0027216:18918-18937 | Msa1432970:CDS | 35.0% | |
| AGGATGTTTAAAAGAGACTC+AGG | + | tig0027216:19010-19029 | None:intergenic | 35.0% | |
| AAACATCCTTCCTATGGAAA+AGG | - | tig0027216:19021-19040 | Msa1432970:CDS | 35.0% | |
| ! | ACAAGGATTTCCTTTTCCAT+AGG | + | tig0027216:19034-19053 | None:intergenic | 35.0% |
| GGGTTTATTGTTGCCTTATA+TGG | - | tig0027216:19108-19127 | Msa1432970:CDS | 35.0% | |
| CTTGCAACATATACTAGATC+CGG | - | tig0027216:19138-19157 | Msa1432970:intron | 35.0% | |
| ! | CTGAAAAGGCATAATGTAGA+TGG | + | tig0027216:19346-19365 | None:intergenic | 35.0% |
| ! | CATCTACATTATGCCTTTTC+AGG | - | tig0027216:19344-19363 | Msa1432970:CDS | 35.0% |
| GAAGTCACAGCAACATATAT+TGG | - | tig0027216:19467-19486 | Msa1432970:CDS | 35.0% | |
| TTTACTTTATCCTTGACGAC+TGG | + | tig0027216:19539-19558 | None:intergenic | 35.0% | |
| GTTTCTGATAACATTAAGGG+AGG | - | tig0027216:19575-19594 | Msa1432970:CDS | 35.0% | |
| ! | TATTTTGCTGAACGATACCA+AGG | - | tig0027216:19722-19741 | Msa1432970:CDS | 35.0% |
| GATAAAAGATGTTGAGACGT+TGG | - | tig0027216:19811-19830 | Msa1432970:CDS | 35.0% | |
| TAAAAGATGTTGAGACGTTG+GGG | - | tig0027216:19813-19832 | Msa1432970:CDS | 35.0% | |
| GGCTGAAAAATTAATTAGCC+AGG | - | tig0027216:19892-19911 | Msa1432970:CDS | 35.0% | |
| ACAAATGCAAAAGGAGAGAA+TGG | - | tig0027216:19946-19965 | Msa1432970:CDS | 35.0% | |
| TCAAATTCTCCTCAACACTA+TGG | + | tig0027216:19997-20016 | None:intergenic | 35.0% | |
| TTATGGAAGGAAATGATTGC+AGG | - | tig0027216:20019-20038 | Msa1432970:CDS | 35.0% | |
| GGATTGCAACGATAATAAAC+AGG | + | tig0027216:20118-20137 | None:intergenic | 35.0% | |
| CAATGCCTCATCATAGAATT+GGG | - | tig0027216:20137-20156 | Msa1432970:CDS | 35.0% | |
| GGACAAGCAAAATCATAAGT+TGG | + | tig0027216:20181-20200 | None:intergenic | 35.0% | |
| AATACTGAGCATTACGATCA+TGG | + | tig0027216:20255-20274 | None:intergenic | 35.0% | |
| ATCGTAATGCTCAGTATTAC+AGG | - | tig0027216:20257-20276 | Msa1432970:CDS | 35.0% | |
| TCAGTATTACAGGATTCAAG+CGG | - | tig0027216:20267-20286 | Msa1432970:CDS | 35.0% | |
| TTCTCATCTACGAATTTAGC+CGG | - | tig0027216:20308-20327 | Msa1432970:CDS | 35.0% | |
| ! | CTTCTATGGTTTGTCCAAAA+TGG | - | tig0027216:20367-20386 | Msa1432970:CDS | 35.0% |
| ! | ACAAAAAGTATGAAGCTGCT+GGG | - | tig0027216:20833-20852 | Msa1432970:intron | 35.0% |
| CTTCTCTACTTCCTTTACTA+TGG | + | tig0027216:20959-20978 | None:intergenic | 35.0% | |
| CATAGTAAAGGAAGTAGAGA+AGG | - | tig0027216:20957-20976 | Msa1432970:CDS | 35.0% | |
| ! | AGTGGTGTTTTACATCTTGA+AGG | - | tig0027216:21006-21025 | Msa1432970:intron | 35.0% |
| ! | ATTAGTTAGCCTGACATTGA+TGG | - | tig0027216:21080-21099 | Msa1432970:intron | 35.0% |
| AATCAAACTCCATCAATGTC+AGG | + | tig0027216:21092-21111 | None:intergenic | 35.0% | |
| !! | CTTTTGATTGGCTGTATCTA+TGG | - | tig0027216:21206-21225 | Msa1432970:intron | 35.0% |
| CTAATCTATACACTACCATC+AGG | - | tig0027216:21448-21467 | Msa1432970:intron | 35.0% | |
| ! | TGGTAGTCTTGATTAAGTGT+CGG | + | tig0027216:21499-21518 | None:intergenic | 35.0% |
| TCTCTCTCAAATTAAAGCCA+AGG | + | tig0027216:21573-21592 | None:intergenic | 35.0% | |
| GAGAGAGAAAAATGACACTT+TGG | - | tig0027216:21585-21604 | Msa1432970:intron | 35.0% | |
| AAATGACACTTTGGTCTAAG+TGG | - | tig0027216:21594-21613 | Msa1432970:intron | 35.0% | |
| GTGCTATAAAACTAGTTCCA+TGG | + | tig0027216:21719-21738 | None:intergenic | 35.0% | |
| GGTATGTACTTTCAAGAGAA+TGG | + | tig0027216:21773-21792 | None:intergenic | 35.0% | |
| AAGCAAACAGGTATATGCTA+GGG | + | tig0027216:21794-21813 | None:intergenic | 35.0% | |
| TACTTAACACTGAAGCAAAC+AGG | + | tig0027216:21806-21825 | None:intergenic | 35.0% | |
| !! | ACTTTTAAGAGAGTGGGATT+AGG | + | tig0027216:21908-21927 | None:intergenic | 35.0% |
| !! | GTATGCACTTTTAAGAGAGT+GGG | + | tig0027216:21914-21933 | None:intergenic | 35.0% |
| TACCCTATGAATAGACACTT+TGG | - | tig0027216:21931-21950 | Msa1432970:intron | 35.0% | |
| ! | GAACCAAAGTGTCTATTCAT+AGG | + | tig0027216:21937-21956 | None:intergenic | 35.0% |
| AAAAAGGAGACTCTAGCATA+TGG | - | tig0027216:22085-22104 | Msa1432970:intron | 35.0% | |
| !! | AATAACACGATTGGTTTCGA+AGG | + | tig0027216:22199-22218 | None:intergenic | 35.0% |
| GGTAATTTGGATAGCTATTG+TGG | - | tig0027216:22288-22307 | Msa1432970:intron | 35.0% | |
| TAAGCATAACACTGAAGTGA+TGG | + | tig0027216:22331-22350 | None:intergenic | 35.0% | |
| AACAGATGCACCACGAAATT+TGG | + | tig0027216:17534-17553 | None:intergenic | 40.0% | |
| GCAACCCTTCCTAATTTCTA+TGG | - | tig0027216:17578-17597 | Msa1432970:CDS | 40.0% | |
| !!! | TTTTTTTTTGGGTGGTGTCC+GGG | + | tig0027216:17802-17821 | None:intergenic | 40.0% |
| AGAAATAGTTAGGCTCCGTT+TGG | + | tig0027216:18215-18234 | None:intergenic | 40.0% | |
| ! | ATAAGTTTTGCGAGACGGTT+TGG | + | tig0027216:18374-18393 | None:intergenic | 40.0% |
| GCTTAAGTGAACCTTCAATC+TGG | - | tig0027216:18442-18461 | Msa1432970:intron | 40.0% | |
| TTGAGGGTGAGTGATTGTTT+AGG | - | tig0027216:18658-18677 | Msa1432970:intron | 40.0% | |
| TGAGGGTGAGTGATTGTTTA+GGG | - | tig0027216:18659-18678 | Msa1432970:intron | 40.0% | |
| GGATCAAATTGAAGGTTTGC+CGG | - | tig0027216:18680-18699 | Msa1432970:CDS | 40.0% | |
| CAATTGCAGATCTAGCTATC+TGG | - | tig0027216:18917-18936 | Msa1432970:CDS | 40.0% | |
| ! | GGATTTCCTTTTCCATAGGA+AGG | + | tig0027216:19030-19049 | None:intergenic | 40.0% |
| GCAATCACTAAACAAGCACA+AGG | + | tig0027216:19051-19070 | None:intergenic | 40.0% | |
| AACAATAAACCCTGTCAGCA+GGG | + | tig0027216:19100-19119 | None:intergenic | 40.0% | |
| ! | ATCCGGTTTGCTCTATTGTT+TGG | - | tig0027216:19155-19174 | Msa1432970:intron | 40.0% |
| GTCCAAACAATAGAGCAAAC+CGG | + | tig0027216:19160-19179 | None:intergenic | 40.0% | |
| TCTGATAACATTAAGGGAGG+AGG | - | tig0027216:19578-19597 | Msa1432970:CDS | 40.0% | |
| AAGTTGGAAAAGTTCGCTTG+CGG | - | tig0027216:19636-19655 | Msa1432970:CDS | 40.0% | |
| AACGCAAAATAACCTGACCT+TGG | + | tig0027216:19742-19761 | None:intergenic | 40.0% | |
| AAAAGATGTTGAGACGTTGG+GGG | - | tig0027216:19814-19833 | Msa1432970:CDS | 40.0% | |
| ! | AGATTACTTCCCTGAGTTGA+TGG | - | tig0027216:19865-19884 | Msa1432970:CDS | 40.0% |
| TCCACGTGAACAAATGCAAA+AGG | - | tig0027216:19937-19956 | Msa1432970:CDS | 40.0% | |
| ! | TCCTTTTGCATTTGTTCACG+TGG | + | tig0027216:19941-19960 | None:intergenic | 40.0% |
| ATGCAAAAGGAGAGAATGGA+TGG | - | tig0027216:19950-19969 | Msa1432970:CDS | 40.0% | |
| ATGCAGAAACCATAGTGTTG+AGG | - | tig0027216:19985-20004 | Msa1432970:CDS | 40.0% | |
| AAATGATTGCAGGATCAGAG+AGG | - | tig0027216:20029-20048 | Msa1432970:CDS | 40.0% | |
| AATGATTGCAGGATCAGAGA+GGG | - | tig0027216:20030-20049 | Msa1432970:CDS | 40.0% | |
| CCAATTCTATGATGAGGCAT+TGG | + | tig0027216:20139-20158 | None:intergenic | 40.0% | |
| CCAATGCCTCATCATAGAAT+TGG | - | tig0027216:20136-20155 | Msa1432970:CDS | 40.0% | |
| TTGGACCCAATTCTATGATG+AGG | + | tig0027216:20145-20164 | None:intergenic | 40.0% | |
| CCTTCATGAGCATCAACAAA+TGG | + | tig0027216:20202-20221 | None:intergenic | 40.0% | |
| ! | CCATTTGTTGATGCTCATGA+AGG | - | tig0027216:20199-20218 | Msa1432970:CDS | 40.0% |
| ATGGTATTCACTTGACCGAA+GGG | + | tig0027216:20236-20255 | None:intergenic | 40.0% | |
| CGAATTTAGCCGGTTGAATA+TGG | - | tig0027216:20318-20337 | Msa1432970:CDS | 40.0% | |
| GAGTGTAGACCATATTCAAC+CGG | + | tig0027216:20330-20349 | None:intergenic | 40.0% | |
| TCAGCAAACGAAAGCTTCTA+TGG | - | tig0027216:20353-20372 | Msa1432970:CDS | 40.0% | |
| ACTGTTCTCTGTACTTGTAC+AGG | - | tig0027216:20642-20661 | Msa1432970:intron | 40.0% | |
| CTGTTCTCTGTACTTGTACA+GGG | - | tig0027216:20643-20662 | Msa1432970:intron | 40.0% | |
| TGTTCTCTGTACTTGTACAG+GGG | - | tig0027216:20644-20663 | Msa1432970:intron | 40.0% | |
| GTATTGTTAACCCTCACTGA+TGG | - | tig0027216:20775-20794 | Msa1432970:intron | 40.0% | |
| ATGCGGACAAATGATTTCTC+AGG | + | tig0027216:20802-20821 | None:intergenic | 40.0% | |
| ! | TTTTGTGCCTAGGTATGATG+CGG | + | tig0027216:20819-20838 | None:intergenic | 40.0% |
| !! | GCTTCATACTTTTTGTGCCT+AGG | + | tig0027216:20829-20848 | None:intergenic | 40.0% |
| ! | CACAAAAAGTATGAAGCTGC+TGG | - | tig0027216:20832-20851 | Msa1432970:intron | 40.0% |
| ! | AGGAAGTAACCTTGATGGAT+TGG | - | tig0027216:20926-20945 | Msa1432970:CDS | 40.0% |
| !! | GGAAGTAACCTTGATGGATT+GGG | - | tig0027216:20927-20946 | Msa1432970:CDS | 40.0% |
| !! | GAAGTAACCTTGATGGATTG+GGG | - | tig0027216:20928-20947 | Msa1432970:CDS | 40.0% |
| TTGGGGAAATGCCATAGTAA+AGG | - | tig0027216:20945-20964 | Msa1432970:CDS | 40.0% | |
| AAGTAGAGAAGGACCAAGAT+GGG | - | tig0027216:20968-20987 | Msa1432970:CDS | 40.0% | |
| TATGTTTAGCATAGCCGCAA+AGG | - | tig0027216:21417-21436 | Msa1432970:intron | 40.0% | |
| !! | TAGTCTTGATTAAGTGTCGG+TGG | + | tig0027216:21496-21515 | None:intergenic | 40.0% |
| ACATGATTGATAGAGAGGTG+GGG | + | tig0027216:21536-21555 | None:intergenic | 40.0% | |
| GACATGATTGATAGAGAGGT+GGG | + | tig0027216:21537-21556 | None:intergenic | 40.0% | |
| TGACATGATTGATAGAGAGG+TGG | + | tig0027216:21538-21557 | None:intergenic | 40.0% | |
| TAAAGCCAAGGCTTATTGGT+GGG | + | tig0027216:21561-21580 | None:intergenic | 40.0% | |
| TTAAAGCCAAGGCTTATTGG+TGG | + | tig0027216:21562-21581 | None:intergenic | 40.0% | |
| TTCCATGGAAGGTTCATGAA+AGG | + | tig0027216:21704-21723 | None:intergenic | 40.0% | |
| GGTCAGGATGGACAATAATA+AGG | + | tig0027216:21750-21769 | None:intergenic | 40.0% | |
| GAAGCAAACAGGTATATGCT+AGG | + | tig0027216:21795-21814 | None:intergenic | 40.0% | |
| !! | GGTATGCACTTTTAAGAGAG+TGG | + | tig0027216:21915-21934 | None:intergenic | 40.0% |
| !! | TTTGCTTTGTTTGCAGCTTG+AGG | - | tig0027216:22024-22043 | Msa1432970:intron | 40.0% |
| GCTTAACCCTTGCACAAAAA+AGG | - | tig0027216:22069-22088 | Msa1432970:intron | 40.0% | |
| !!! | GAGTCTCCTTTTTTGTGCAA+GGG | + | tig0027216:22078-22097 | None:intergenic | 40.0% |
| !!! | AGAGTCTCCTTTTTTGTGCA+AGG | + | tig0027216:22079-22098 | None:intergenic | 40.0% |
| TGGAGAGAAAGGGATATTTC+AGG | - | tig0027216:22152-22171 | Msa1432970:intron | 40.0% | |
| GGGATTGCAAATAACACGAT+TGG | + | tig0027216:22208-22227 | None:intergenic | 40.0% | |
| !! | GTGTTATTTGCAATCCCAGA+TGG | - | tig0027216:22211-22230 | Msa1432970:CDS | 40.0% |
| TAGTCGAGAACCCAAATACA+AGG | + | tig0027216:22361-22380 | None:intergenic | 40.0% | |
| TTGCTTAATCAATGCCCTGA+TGG | + | tig0027216:22468-22487 | None:intergenic | 40.0% | |
| CGTTGGACAAGAGAAATGTG+GGG | + | tig0027216:17438-17457 | None:intergenic | 45.0% | |
| CCGTTGGACAAGAGAAATGT+GGG | + | tig0027216:17439-17458 | None:intergenic | 45.0% | |
| CCCACATTTCTCTTGTCCAA+CGG | - | tig0027216:17436-17455 | Msa1432970:three_prime_UTR | 45.0% | |
| CCACATTTCTCTTGTCCAAC+GGG | - | tig0027216:17437-17456 | Msa1432970:three_prime_UTR | 45.0% | |
| CGTAACAGCTCCAAATTTCG+TGG | - | tig0027216:17521-17540 | Msa1432970:three_prime_UTR | 45.0% | |
| TCTGTTCTTCTGCGTCACAT+TGG | - | tig0027216:17548-17567 | Msa1432970:CDS | 45.0% | |
| !!! | TTTTTTTTGGGTGGTGTCCG+GGG | + | tig0027216:17801-17820 | None:intergenic | 45.0% |
| ! | AGACGGTTTGGAAGAACTTG+TGG | + | tig0027216:18362-18381 | None:intergenic | 45.0% |
| ! | CTGGCATAAGTTTTGCGAGA+CGG | + | tig0027216:18379-18398 | None:intergenic | 45.0% |
| GTCCCACTTTCTCTCCTATT+GGG | - | tig0027216:18465-18484 | Msa1432970:intron | 45.0% | |
| GACCCAATAGGAGAGAAAGT+GGG | + | tig0027216:18470-18489 | None:intergenic | 45.0% | |
| CTGTAGTTCAAGGACCCAAT+AGG | + | tig0027216:18482-18501 | None:intergenic | 45.0% | |
| TATGCACCTGTACTCTCATC+AGG | - | tig0027216:18817-18836 | Msa1432970:CDS | 45.0% | |
| !! | TCAGGCCCTGCTTTTGAAAA+TGG | - | tig0027216:18835-18854 | Msa1432970:CDS | 45.0% |
| AGACTCAGGAGTAGTATCAC+AGG | + | tig0027216:18996-19015 | None:intergenic | 45.0% | |
| TAGTTGTATCCCTGCTGACA+GGG | - | tig0027216:19088-19107 | Msa1432970:CDS | 45.0% | |
| CAACAATAAACCCTGTCAGC+AGG | + | tig0027216:19101-19120 | None:intergenic | 45.0% | |
| !!! | CATTATGCCTTTTCAGGTGC+TGG | - | tig0027216:19350-19369 | Msa1432970:CDS | 45.0% |
| TCTCTTTCCAGCACCTGAAA+AGG | + | tig0027216:19360-19379 | None:intergenic | 45.0% | |
| !! | TTTCAGGTGCTGGAAAGAGA+TGG | - | tig0027216:19360-19379 | Msa1432970:CDS | 45.0% |
| !! | TTCAGGTGCTGGAAAGAGAT+GGG | - | tig0027216:19361-19380 | Msa1432970:CDS | 45.0% |
| GAAAGAGATGGGAAAGCTTG+AGG | - | tig0027216:19372-19391 | Msa1432970:CDS | 45.0% | |
| !!! | TCTTTTGGCTTGGTTGCAGA+TGG | + | tig0027216:19512-19531 | None:intergenic | 45.0% |
| ! | ACTTTTCCAACTTCAGCAGC+TGG | + | tig0027216:19629-19648 | None:intergenic | 45.0% |
| CCAATGTGAAGATAGCCACT+GGG | + | tig0027216:19674-19693 | None:intergenic | 45.0% | |
| TCCAATGTGAAGATAGCCAC+TGG | + | tig0027216:19675-19694 | None:intergenic | 45.0% | |
| ATGATTGCAGGATCAGAGAG+GGG | - | tig0027216:20031-20050 | Msa1432970:CDS | 45.0% | |
| CTTGCATATCCAACTTCCCA+CGG | + | tig0027216:20072-20091 | None:intergenic | 45.0% | |
| !! | GGATCACGGAGTGATTTGTT+TGG | + | tig0027216:20097-20116 | None:intergenic | 45.0% |
| ! | AAGGTATCACTCATGCCCTT+CGG | - | tig0027216:20218-20237 | Msa1432970:CDS | 45.0% |
| CATGGTATTCACTTGACCGA+AGG | + | tig0027216:20237-20256 | None:intergenic | 45.0% | |
| TTACAGGATTCAAGCGGACA+TGG | - | tig0027216:20273-20292 | Msa1432970:CDS | 45.0% | |
| TACAGGATTCAAGCGGACAT+GGG | - | tig0027216:20274-20293 | Msa1432970:CDS | 45.0% | |
| GTTCTCTGTACTTGTACAGG+GGG | - | tig0027216:20645-20664 | Msa1432970:intron | 45.0% | |
| TTTCTCAGGACCATCAGTGA+GGG | + | tig0027216:20788-20807 | None:intergenic | 45.0% | |
| ATTTCTCAGGACCATCAGTG+AGG | + | tig0027216:20789-20808 | None:intergenic | 45.0% | |
| CATTTGTCCGCATCATACCT+AGG | - | tig0027216:20809-20828 | Msa1432970:intron | 45.0% | |
| CATCAAGGTTACTTCCTCAC+CGG | + | tig0027216:20923-20942 | None:intergenic | 45.0% | |
| GAAGTAGAGAAGGACCAAGA+TGG | - | tig0027216:20967-20986 | Msa1432970:CDS | 45.0% | |
| ACCAAGATGGGAATGTCACA+GGG | - | tig0027216:20980-20999 | Msa1432970:CDS | 45.0% | |
| ! | CCAAGTGAGCTTCAGTTTTG+TGG | + | tig0027216:21043-21062 | None:intergenic | 45.0% |
| CCACAAAACTGAAGCTCACT+TGG | - | tig0027216:21040-21059 | Msa1432970:intron | 45.0% | |
| AAGACTACCATCAACTCCCT+TGG | - | tig0027216:21509-21528 | Msa1432970:intron | 45.0% | |
| CATGATTGATAGAGAGGTGG+GGG | + | tig0027216:21535-21554 | None:intergenic | 45.0% | |
| GGGTGACATGATTGATAGAG+AGG | + | tig0027216:21541-21560 | None:intergenic | 45.0% | |
| GACCTTTCATGAACCTTCCA+TGG | - | tig0027216:21699-21718 | Msa1432970:intron | 45.0% | |
| ACTTTCAAGAGAATGGGGTC+AGG | + | tig0027216:21766-21785 | None:intergenic | 45.0% | |
| ACTTAAACAGGGAAGCAAGC+AGG | + | tig0027216:21999-22018 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGCAGCTTGAGGA+AGG | - | tig0027216:22028-22047 | Msa1432970:intron | 45.0% |
| AGTATTGCAGCTGGAGAGAA+AGG | - | tig0027216:22141-22160 | Msa1432970:intron | 45.0% | |
| GTATTGCAGCTGGAGAGAAA+GGG | - | tig0027216:22142-22161 | Msa1432970:intron | 45.0% | |
| TATTTGCAATCCCAGATGGC+AGG | - | tig0027216:22215-22234 | Msa1432970:CDS | 45.0% | |
| AATGCCAAACAGTGCCATCA+GGG | - | tig0027216:22451-22470 | Msa1432970:CDS | 45.0% | |
| GTCGATGGATGGAGAGAATC+CGG | + | tig0027216:17392-17411 | None:intergenic | 50.0% | |
| AGAAATGTGGGGACGGAATC+AGG | + | tig0027216:17427-17446 | None:intergenic | 50.0% | |
| GGACAAGAGAAATGTGGGGA+CGG | + | tig0027216:17434-17453 | None:intergenic | 50.0% | |
| CCCGTTGGACAAGAGAAATG+TGG | + | tig0027216:17440-17459 | None:intergenic | 50.0% | |
| GAGAAAGGAAACGTACCCGT+TGG | + | tig0027216:17455-17474 | None:intergenic | 50.0% | |
| GAAAGTGGGACCCAGATTGA+AGG | + | tig0027216:18456-18475 | None:intergenic | 50.0% | |
| GGTCCCACTTTCTCTCCTAT+TGG | - | tig0027216:18464-18483 | Msa1432970:intron | 50.0% | |
| GGACCCAATAGGAGAGAAAG+TGG | + | tig0027216:18471-18490 | None:intergenic | 50.0% | |
| CTGTCAGCAGGGATACAACT+AGG | + | tig0027216:19089-19108 | None:intergenic | 50.0% | |
| CTAGTTGTATCCCTGCTGAC+AGG | - | tig0027216:19087-19106 | Msa1432970:CDS | 50.0% | |
| !!! | TTGACGACTGGCTGGTCTTT+TGG | + | tig0027216:19527-19546 | None:intergenic | 50.0% |
| AAAAGACCAGCCAGTCGTCA+AGG | - | tig0027216:19526-19545 | Msa1432970:CDS | 50.0% | |
| CTTTATCCTTGACGACTGGC+TGG | + | tig0027216:19535-19554 | None:intergenic | 50.0% | |
| GGAAGATCTATCTCTGCCGA+AGG | + | tig0027216:19608-19627 | None:intergenic | 50.0% | |
| GATCTTCCAGCTGCTGAAGT+TGG | - | tig0027216:19620-19639 | Msa1432970:CDS | 50.0% | |
| TGAAGATAGCCACTGGGTTC+AGG | + | tig0027216:19668-19687 | None:intergenic | 50.0% | |
| CCCAGTGGCTATCTTCACAT+TGG | - | tig0027216:19671-19690 | Msa1432970:CDS | 50.0% | |
| TGCTGAACGATACCAAGGTC+AGG | - | tig0027216:19727-19746 | Msa1432970:CDS | 50.0% | |
| !! | CTTCCCTGAGTTGATGGAAC+TGG | - | tig0027216:19871-19890 | Msa1432970:CDS | 50.0% |
| CAGCCAGTTCCATCAACTCA+GGG | + | tig0027216:19877-19896 | None:intergenic | 50.0% | |
| TCAGCCAGTTCCATCAACTC+AGG | + | tig0027216:19878-19897 | None:intergenic | 50.0% | |
| CATCAACATACGCCTTACCC+TGG | + | tig0027216:19913-19932 | None:intergenic | 50.0% | |
| GTTTGCAGTGTTGTGTCCGT+GGG | - | tig0027216:20053-20072 | Msa1432970:CDS | 50.0% | |
| CCTTGCACTGTAGGAAATCG+TGG | + | tig0027216:20415-20434 | None:intergenic | 50.0% | |
| CCACGATTTCCTACAGTGCA+AGG | - | tig0027216:20412-20431 | Msa1432970:CDS | 50.0% | |
| CGCACAATTCCTTGCACTGT+AGG | + | tig0027216:20424-20443 | None:intergenic | 50.0% | |
| GTGCAAGGAATTGTGCGTAG+AGG | - | tig0027216:20427-20446 | Msa1432970:intron | 50.0% | |
| TCATGGAATGGGACAAGCTC+TGG | - | tig0027216:20686-20705 | Msa1432970:intron | 50.0% | |
| CGGTGAGGAAGTAACCTTGA+TGG | - | tig0027216:20921-20940 | Msa1432970:CDS | 50.0% | |
| GGCATTTCCCCAATCCATCA+AGG | + | tig0027216:20938-20957 | None:intergenic | 50.0% | |
| GACCAAGATGGGAATGTCAC+AGG | - | tig0027216:20979-20998 | Msa1432970:CDS | 50.0% | |
| ACCCTGTGACATTCCCATCT+TGG | + | tig0027216:20984-21003 | None:intergenic | 50.0% | |
| GGGAATGTCACAGGGTTAAG+TGG | - | tig0027216:20988-21007 | Msa1432970:intron | 50.0% | |
| !! | CTTGATTAAGTGTCGGTGGC+TGG | + | tig0027216:21492-21511 | None:intergenic | 50.0% |
| TGTCACCCACCAATAAGCCT+TGG | - | tig0027216:21553-21572 | Msa1432970:intron | 50.0% | |
| TCAAGAGAATGGGGTCAGGA+TGG | + | tig0027216:21762-21781 | None:intergenic | 50.0% | |
| AACAGGGAAGCAAGCAGGTT+TGG | + | tig0027216:21994-22013 | None:intergenic | 50.0% | |
| TTTGCAGCTTGAGGAAGGAG+AGG | - | tig0027216:22033-22052 | Msa1432970:intron | 50.0% | |
| !! | GCATGGAGAAGTATTGCAGC+TGG | - | tig0027216:22132-22151 | Msa1432970:intron | 50.0% |
| !! | ACACGATTGGTTTCGAAGGC+CGG | + | tig0027216:22195-22214 | None:intergenic | 50.0% |
| GAATGCCAAACAGTGCCATC+AGG | - | tig0027216:22450-22469 | Msa1432970:CDS | 50.0% | |
| AATGCCCTGATGGCACTGTT+TGG | + | tig0027216:22458-22477 | None:intergenic | 50.0% | |
| ! | GCTTTGTGCACTGTGCTGCT+AGG | + | tig0027216:17279-17298 | None:intergenic | 55.0% |
| AAAGCGAGCGACGACGAAGA+TGG | - | tig0027216:17294-17313 | Msa1432970:three_prime_UTR | 55.0% | |
| ATTGCCGCATCCAAACTCGC+CGG | - | tig0027216:17370-17389 | Msa1432970:three_prime_UTR | 55.0% | |
| GAATCCGGCGAGTTTGGATG+CGG | + | tig0027216:17377-17396 | None:intergenic | 55.0% | |
| TGGAGAGAATCCGGCGAGTT+TGG | + | tig0027216:17383-17402 | None:intergenic | 55.0% | |
| AATGTGGGGACGGAATCAGG+AGG | + | tig0027216:17424-17443 | None:intergenic | 55.0% | |
| AAGGTTCAGCGTTCGAACCC+CGG | - | tig0027216:17781-17800 | Msa1432970:intron | 55.0% | |
| GCAGATCTAGCTATCTGGGC+AGG | - | tig0027216:18922-18941 | Msa1432970:CDS | 55.0% | |
| !!! | GACTGGCTGGTCTTTTGGCT+TGG | + | tig0027216:19522-19541 | None:intergenic | 55.0% |
| TAAGGGAGGAGGCAAGCCTT+CGG | - | tig0027216:19589-19608 | Msa1432970:CDS | 55.0% | |
| GGTTTGCAGTGTTGTGTCCG+TGG | - | tig0027216:20052-20071 | Msa1432970:CDS | 55.0% | |
| GTGTTGTGTCCGTGGGAAGT+TGG | - | tig0027216:20060-20079 | Msa1432970:CDS | 55.0% | |
| GACGCAGAGTCTGTATCAGC+CGG | - | tig0027216:20901-20920 | Msa1432970:CDS | 55.0% | |
| AGAGTCTGTATCAGCCGGTG+AGG | - | tig0027216:20906-20925 | Msa1432970:CDS | 55.0% | |
| !! | GATTAAGTGTCGGTGGCTGG+AGG | + | tig0027216:21489-21508 | None:intergenic | 55.0% |
| GGTGTGATGTACCCTTCGTC+CGG | - | tig0027216:22173-22192 | Msa1432970:intron | 55.0% | |
| ATGTCTGCTGCCTGCCATCT+GGG | + | tig0027216:22228-22247 | None:intergenic | 55.0% | |
| GATGCGGCAATCCCCGCTAA+CGG | + | tig0027216:17361-17380 | None:intergenic | 60.0% | |
| !! | GGAAGGGAGGTGTCGATGGA+TGG | + | tig0027216:17403-17422 | None:intergenic | 60.0% |
| !! | AGGAGGAAGGGAGGTGTCGA+TGG | + | tig0027216:17407-17426 | None:intergenic | 60.0% |
| GACGGAATCAGGAGGAAGGG+AGG | + | tig0027216:17416-17435 | None:intergenic | 60.0% | |
| GGGGACGGAATCAGGAGGAA+GGG | + | tig0027216:17419-17438 | None:intergenic | 60.0% | |
| TGGGGACGGAATCAGGAGGA+AGG | + | tig0027216:17420-17439 | None:intergenic | 60.0% | |
| ! | GCAGGGCCTGATGAGAGTAC+AGG | + | tig0027216:18826-18845 | None:intergenic | 60.0% |
| GCTATCTGGGCAGGTCTTGC+AGG | - | tig0027216:18931-18950 | Msa1432970:CDS | 60.0% | |
| CGGTTTGCACCTGAACCCAG+TGG | - | tig0027216:19656-19675 | Msa1432970:CDS | 60.0% | |
| ATGGGAAGGTGGCTGCCTGA+TGG | + | tig0027216:21466-21485 | None:intergenic | 60.0% | |
| !! | AGTGTCGGTGGCTGGAGGAT+GGG | + | tig0027216:21484-21503 | None:intergenic | 60.0% |
| !! | AAGTGTCGGTGGCTGGAGGA+TGG | + | tig0027216:21485-21504 | None:intergenic | 60.0% |
| GATAGAGAGGTGGGGGCCAA+GGG | + | tig0027216:21528-21547 | None:intergenic | 60.0% | |
| TGATAGAGAGGTGGGGGCCA+AGG | + | tig0027216:21529-21548 | None:intergenic | 60.0% | |
| GGTTTCGAAGGCCGGACGAA+GGG | + | tig0027216:22187-22206 | None:intergenic | 60.0% | |
| TGGTTTCGAAGGCCGGACGA+AGG | + | tig0027216:22188-22207 | None:intergenic | 60.0% | |
| GATGTCTGCTGCCTGCCATC+TGG | + | tig0027216:22229-22248 | None:intergenic | 60.0% | |
| AATCCCCGCTAACGGTGGCG+CGG | + | tig0027216:17353-17372 | None:intergenic | 65.0% | |
| GTGGCTGGAGGATGGGAAGG+TGG | + | tig0027216:21477-21496 | None:intergenic | 65.0% | |
| TCGGTGGCTGGAGGATGGGA+AGG | + | tig0027216:21480-21499 | None:intergenic | 65.0% | |
| GTGGGGGCCAAGGGAGTTGA+TGG | + | tig0027216:21519-21538 | None:intergenic | 65.0% | |
| CGCGGCGGCGGAGAAGGAAA+GGG | + | tig0027216:17335-17354 | None:intergenic | 70.0% | |
| GCGGCAATCCCCGCTAACGG+TGG | + | tig0027216:17358-17377 | None:intergenic | 70.0% | |
| GCGCGGCGGCGGAGAAGGAA+AGG | + | tig0027216:17336-17355 | None:intergenic | 75.0% | |
| ! | CGCTAACGGTGGCGCGGCGG+CGG | + | tig0027216:17347-17366 | None:intergenic | 80.0% |
| ! | CGCCGCCGCGCCACCGTTAG+CGG | - | tig0027216:17345-17364 | Msa1432970:three_prime_UTR | 80.0% |
| ! | GCCGCCGCGCCACCGTTAGC+GGG | - | tig0027216:17346-17365 | Msa1432970:three_prime_UTR | 80.0% |
| ! | CCCCGCTAACGGTGGCGCGG+CGG | + | tig0027216:17350-17369 | None:intergenic | 80.0% |
| ! | CCGCCGCGCCACCGTTAGCG+GGG | - | tig0027216:17347-17366 | Msa1432970:three_prime_UTR | 80.0% |
| ! | CGGTGGCGCGGCGGCGGAGA+AGG | + | tig0027216:17341-17360 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027216 | gene | 17245 | 22560 | 17245 | ID=Msa1432970;Name=Msa1432970 |
| tig0027216 | mRNA | 17245 | 22560 | 17245 | ID=Msa1432970-mRNA-1;Parent=Msa1432970;Name=Msa1432970-mRNA-1;_AED=0.04;_eAED=0.04;_QI=68|1|1|1|1|1|6|302|735 |
| tig0027216 | exon | 17245 | 17765 | 17245 | ID=Msa1432970-mRNA-1:exon:8411;Parent=Msa1432970-mRNA-1 |
| tig0027216 | exon | 18674 | 19141 | 18674 | ID=Msa1432970-mRNA-1:exon:8410;Parent=Msa1432970-mRNA-1 |
| tig0027216 | exon | 19316 | 20439 | 19316 | ID=Msa1432970-mRNA-1:exon:8409;Parent=Msa1432970-mRNA-1 |
| tig0027216 | exon | 20853 | 21006 | 20853 | ID=Msa1432970-mRNA-1:exon:8408;Parent=Msa1432970-mRNA-1 |
| tig0027216 | exon | 22180 | 22276 | 22180 | ID=Msa1432970-mRNA-1:exon:8407;Parent=Msa1432970-mRNA-1 |
| tig0027216 | exon | 22347 | 22560 | 22347 | ID=Msa1432970-mRNA-1:exon:8406;Parent=Msa1432970-mRNA-1 |
| tig0027216 | five_prime_UTR | 22493 | 22560 | 22493 | ID=Msa1432970-mRNA-1:five_prime_utr;Parent=Msa1432970-mRNA-1 |
| tig0027216 | CDS | 22347 | 22492 | 22347 | ID=Msa1432970-mRNA-1:cds;Parent=Msa1432970-mRNA-1 |
| tig0027216 | CDS | 22180 | 22276 | 22180 | ID=Msa1432970-mRNA-1:cds;Parent=Msa1432970-mRNA-1 |
| tig0027216 | CDS | 20853 | 21006 | 20853 | ID=Msa1432970-mRNA-1:cds;Parent=Msa1432970-mRNA-1 |
| tig0027216 | CDS | 19316 | 20439 | 19316 | ID=Msa1432970-mRNA-1:cds;Parent=Msa1432970-mRNA-1 |
| tig0027216 | CDS | 18674 | 19141 | 18674 | ID=Msa1432970-mRNA-1:cds;Parent=Msa1432970-mRNA-1 |
| tig0027216 | CDS | 17547 | 17765 | 17547 | ID=Msa1432970-mRNA-1:cds;Parent=Msa1432970-mRNA-1 |
| tig0027216 | three_prime_UTR | 17245 | 17546 | 17245 | ID=Msa1432970-mRNA-1:three_prime_utr;Parent=Msa1432970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
