AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0174290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174290 MtrunA17_Chr1g0194861 92.308 1352 96 5 1 1350 1 1346 0.0 2519
Msa0174290 MtrunA17_Chr6g0456701 36.458 96 58 3 111 205 4 97 8.72e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174290 AT4G02110.2 70.870 230 66 1 920 1149 967 1195 5.68e-114 387
Msa0174290 AT4G02110.2 67.290 107 30 1 129 235 1 102 1.22e-37 154
Msa0174290 AT4G02110.1 70.870 230 66 1 920 1149 1096 1324 1.43e-112 385
Msa0174290 AT4G02110.1 63.436 227 78 1 9 235 10 231 3.09e-89 318
Msa0174290 AT1G67180.6 36.792 106 57 4 109 206 2 105 1.12e-13 75.1
Msa0174290 AT1G67180.2 36.792 106 57 4 109 206 2 105 4.88e-13 73.6
Msa0174290 AT1G67180.1 36.792 106 57 4 109 206 2 105 4.88e-13 73.6

Find 308 sgRNAs with CRISPR-Local

Find 640 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAGAGTCTTTACCCTTAT+TGG 0.075467 1_4:-59898592 None:intergenic
GTTTGGGTGCTACTGCATTT+TGG 0.133192 1_4:-59901855 None:intergenic
GATTTCCTGGTCTTGATAAT+TGG 0.143495 1_4:+59899612 Msa0174290:CDS
CTTTGCAGCTGTGGTCTTCT+TGG 0.147073 1_4:-59900206 None:intergenic
ACTTGTGGACCAGTAGAATT+TGG 0.162831 1_4:-59898558 None:intergenic
TCCATCTATATCAGAATTTA+AGG 0.164801 1_4:+59900516 Msa0174290:CDS
AATTTCTCTGTCCTCCTTAT+AGG 0.170617 1_4:-59900691 None:intergenic
AAAATAAAACATGTGGTTTC+AGG 0.179171 1_4:-59900550 None:intergenic
AAATCGGAAAAGGCAGTATT+TGG 0.201132 1_4:+59900238 Msa0174290:CDS
TATACTCGCTTTCTTGATAC+TGG 0.214753 1_4:+59901420 Msa0174290:CDS
ATTTGTTAACATCAAGGATT+TGG 0.217175 1_4:-59899856 None:intergenic
AAAAGTCAATAAAAGTAAAA+AGG 0.225243 1_4:+59902363 Msa0174290:CDS
ACAGGTCATGGTGCCTTCTA+TGG 0.228805 1_4:+59900997 Msa0174290:CDS
AAAACCCAATAAAAGGAAAA+AGG 0.231177 1_4:+59901893 Msa0174290:CDS
TCTTGTGTAACTTAACTTCT+TGG 0.243171 1_4:-59898868 None:intergenic
GCCTCATCTCTTGTCTCATT+TGG 0.250185 1_4:-59900271 None:intergenic
TCATTCTTTGAATTCTTTCC+TGG 0.251009 1_4:-59899587 None:intergenic
TTCAACAGCCGCCACTTTCT+TGG 0.251038 1_4:-59900967 None:intergenic
AGTCCCCTAGGTTCAAAATT+TGG 0.268181 1_4:+59898477 Msa0174290:CDS
TAAAGATTTGGATGGAATTC+CGG 0.270747 1_4:+59896371 Msa0174290:CDS
TCCAAAGGCACCTGGCTTCC+AGG 0.273647 1_4:+59898776 Msa0174290:CDS
CAGACAGTGACATTTCTTTC+AGG 0.274545 1_4:-59900306 None:intergenic
TCCTTAGACTTGATATTTGC+TGG 0.278398 1_4:-59900481 None:intergenic
ATTCGATTCAAGCTTGTTAA+TGG 0.292549 1_4:+59894319 Msa0174290:CDS
GGTGTTCATTTCGCTCTCTT+TGG 0.298139 1_4:+59894174 Msa0174290:CDS
TTCTGCCTTACTTTGATGTT+TGG 0.298597 1_4:-59902110 None:intergenic
TGCTATTTCTTTGCTTCTGC+TGG 0.302908 1_4:-59899801 None:intergenic
GTACAGACCGCTTAAAGATT+TGG 0.314245 1_4:+59896359 Msa0174290:CDS
CCTTGATGTTAACAAATTGA+TGG 0.316106 1_4:+59899862 Msa0174290:CDS
TATTCTAGGAAGAACCAAAA+AGG 0.316958 1_4:+59898951 Msa0174290:CDS
TTTGTTAACATCAAGGATTT+GGG 0.318611 1_4:-59899855 None:intergenic
GATTCCAAGCTGGGGCAATC+AGG 0.318812 1_4:+59898435 Msa0174290:CDS
CCAGGATCGGGATGACATTA+TGG 0.318910 1_4:+59896434 Msa0174290:CDS
AAAGATTTGGATGGAATTCC+GGG 0.320376 1_4:+59896372 Msa0174290:CDS
TTCCAGGATATTGACATTAC+TGG 0.328872 1_4:+59898792 Msa0174290:CDS
TCTGTCCTCCTTATAGGATC+TGG 0.341349 1_4:-59900685 None:intergenic
TAATCTGCGTGATGACAATT+TGG 0.341472 1_4:+59898842 Msa0174290:CDS
GTATCAAGAAAGCGAGTATA+AGG 0.343349 1_4:-59901417 None:intergenic
TCTTTACCCTTATTGGCATT+TGG 0.346613 1_4:-59898585 None:intergenic
GAGGATTGCAGCAATCGATA+TGG 0.347128 1_4:-59902273 None:intergenic
GCCAGCAAATATCAAGTCTA+AGG 0.349651 1_4:+59900480 Msa0174290:CDS
TCCTGGAAGCCAGGTGCCTT+TGG 0.349876 1_4:-59898777 None:intergenic
GCCTTAAATTCTGATATAGA+TGG 0.350253 1_4:-59900517 None:intergenic
TCATAGCTCCAGATCCTATA+AGG 0.358776 1_4:+59900677 Msa0174290:CDS
GCATGACATCTCCTCTTTCC+AGG 0.359580 1_4:-59901728 None:intergenic
TCTGCATGTGTTGAAGGTTC+TGG 0.362025 1_4:+59899074 Msa0174290:CDS
GATTCTGCATTTCCTGAGAT+AGG 0.362624 1_4:-59899401 None:intergenic
AAACCATGCTCTTCATCATT+TGG 0.365260 1_4:-59900409 None:intergenic
CAGCTGTTCCTGAGGAGGAT+TGG 0.366522 1_4:+59901826 Msa0174290:CDS
ATTTCCTGGTCTTGATAATT+GGG 0.369870 1_4:+59899613 Msa0174290:CDS
CGAGGACGGTGCCATCAATA+TGG 0.373926 1_4:+59900939 Msa0174290:CDS
TCAAAGAATGAAGGATTTCC+TGG 0.374952 1_4:+59899599 Msa0174290:CDS
TCTTGGAGCCTCCATATTGA+TGG 0.375100 1_4:-59900950 None:intergenic
TGCAAAGAAGTTAGCGAAAT+CGG 0.379072 1_4:+59900222 Msa0174290:CDS
TTGCGCGGTGACTTTCTAAT+CGG 0.381507 1_4:-59899662 None:intergenic
GTTGAGTACGTCTGCAAGCC+GGG 0.382287 1_4:+59901543 Msa0174290:CDS
CGAGAAGACTTGAATTGAAA+TGG 0.386129 1_4:-59894065 None:intergenic
GATTTGGTTGTCTGCTTGAC+TGG 0.387720 1_4:+59896402 Msa0174290:CDS
CTAATATGCTACAAATTTGA+AGG 0.393357 1_4:+59896617 Msa0174290:CDS
TGTTAATTTCTTCAGCTTGA+AGG 0.393387 1_4:+59897663 Msa0174290:intron
TCAGCTGCCAAGAGAACTTT+GGG 0.395676 1_4:+59899689 Msa0174290:CDS
AATTCCGGGTGCAAAAGATT+TGG 0.397200 1_4:+59896386 Msa0174290:CDS
AAATCGACACGTGGCATGCC+AGG 0.401546 1_4:-59901465 None:intergenic
CTGATTTGTGGTGATGAAAC+TGG 0.403537 1_4:+59902226 Msa0174290:CDS
AATCGGAAAAGGCAGTATTT+GGG 0.404273 1_4:+59900239 Msa0174290:CDS
ATCACCGTTGGCTGGAAGAT+TGG 0.404581 1_4:+59897518 Msa0174290:CDS
TTCTCATCAGTGGTCATATC+AGG 0.407810 1_4:+59900645 Msa0174290:CDS
ATTTCTTCAGCTTGAAGGAT+TGG 0.411153 1_4:+59897668 Msa0174290:intron
ATTTGCAAAACTTCAAAGTA+AGG 0.412007 1_4:+59901620 Msa0174290:CDS
CTTAAGCGTGCGGTCAAAGC+TGG 0.412816 1_4:+59901366 Msa0174290:CDS
TTTCTTCAGCTTGAAGGATT+GGG 0.414914 1_4:+59897669 Msa0174290:intron
GAGATTTACCATTTGTTAGT+GGG 0.417900 1_4:-59899232 None:intergenic
CTTGTGGACCAGTAGAATTT+GGG 0.418686 1_4:-59898557 None:intergenic
GGGATGCGCATTGTTGTATA+TGG 0.419008 1_4:+59901018 Msa0174290:CDS
TGAGATTTACCATTTGTTAG+TGG 0.420188 1_4:-59899233 None:intergenic
CTTTATTGTGGCCAATCTCT+TGG 0.421271 1_4:-59897488 None:intergenic
AGCAAAGAAATAGCAACTTC+TGG 0.422190 1_4:+59899809 Msa0174290:CDS
TCTACTTCACATTTGTCATC+TGG 0.424117 1_4:-59899959 None:intergenic
TGATGAAGAGCATGGTTTAG+AGG 0.426899 1_4:+59900414 Msa0174290:CDS
AACAATGCGCATCCCATAGA+AGG 0.432187 1_4:-59901010 None:intergenic
TGGCATGCCAGGGCTAACTA+TGG 0.435261 1_4:-59901454 None:intergenic
AATGGCTCCGGATGAAGAAT+TGG 0.436222 1_4:+59899988 Msa0174290:CDS
ACTGGAAATACAAATTCATC+TGG 0.437293 1_4:+59898810 Msa0174290:CDS
TTCAAGCTTGTTAATGGCGG+TGG 0.438677 1_4:+59894325 Msa0174290:CDS
GTCAGCTGCCAAGAGAACTT+TGG 0.438819 1_4:+59899688 Msa0174290:CDS
TAGAAAACTGTGCACCCATC+AGG 0.438898 1_4:-59896565 None:intergenic
TTTCTTTCTGTTGACAAAGA+TGG 0.441291 1_4:+59899305 Msa0174290:CDS
TCAGACAATGGTTGGCCTGA+TGG 0.442786 1_4:+59896550 Msa0174290:intron
CCCTTCCACCAAGGTAGAAA+AGG 0.443209 1_4:+59899034 Msa0174290:CDS
TTAGAGGAGAGAAGAAATGT+TGG 0.444297 1_4:+59900430 Msa0174290:CDS
CCATCAATTTGTTAACATCA+AGG 0.444383 1_4:-59899862 None:intergenic
TGCCACTCATAAGGCTCCTC+TGG 0.446343 1_4:-59900901 None:intergenic
CAGCTATTCCCGAGGAGGAT+TGG 0.447918 1_4:+59902302 Msa0174290:CDS
TTCCCTCTTCAGACAATGGT+TGG 0.449094 1_4:+59896542 Msa0174290:intron
ATCAGCATTCTTAGACTCAA+TGG 0.450480 1_4:-59898751 None:intergenic
ACTGTACGGCACTCATGCTT+TGG 0.452603 1_4:+59901587 Msa0174290:CDS
ATACTCGCTTTCTTGATACT+GGG 0.453049 1_4:+59901421 Msa0174290:CDS
GACAAATGTGAAGTAGAGTT+GGG 0.453783 1_4:+59899965 Msa0174290:CDS
GCATGCCACGTGTCGATTTG+TGG 0.463323 1_4:+59901469 Msa0174290:CDS
TCTTCTGCATACTCACTAAC+CGG 0.463631 1_4:-59899893 None:intergenic
CGCTAACTTCTTTGCAGCTG+TGG 0.465086 1_4:-59900215 None:intergenic
TCGGTGCTACGAGTTATTCT+AGG 0.468156 1_4:+59898937 Msa0174290:CDS
GCATTTGATAAGCCTATCTC+AGG 0.468199 1_4:+59899389 Msa0174290:CDS
CAGACAATGGTTGGCCTGAT+GGG 0.468396 1_4:+59896551 Msa0174290:intron
ATCAAATCTGCATGTGTTGA+AGG 0.468581 1_4:+59899068 Msa0174290:CDS
ATTCCAAGCTGGGGCAATCA+GGG 0.469861 1_4:+59898436 Msa0174290:CDS
TTTCCAGGGATCCACATACT+TGG 0.474283 1_4:-59901713 None:intergenic
TTGTGTTGTAGCGGACTACT+TGG 0.476668 1_4:+59901521 Msa0174290:CDS
CGATCATCTCACAGAAAACA+AGG 0.477136 1_4:+59894200 Msa0174290:CDS
CCATAATGTCATCCCGATCC+TGG 0.479361 1_4:-59896434 None:intergenic
CATGCCACGTGTCGATTTGT+GGG 0.481317 1_4:+59901470 Msa0174290:CDS
AGCTACATGAATCATATGTT+AGG 0.482525 1_4:+59898727 Msa0174290:CDS
CTGCATGTGTTGAAGGTTCT+GGG 0.482604 1_4:+59899075 Msa0174290:CDS
TGACAAATGTGAAGTAGAGT+TGG 0.483171 1_4:+59899964 Msa0174290:CDS
GGGCAAAACCAATCCTCCTC+GGG 0.485220 1_4:-59902310 None:intergenic
TTGATCTACTACCCTGGAAA+AGG 0.486609 1_4:-59898979 None:intergenic
GATGTTGGTGACTGCATTGT+GGG 0.486729 1_4:+59894533 Msa0174290:CDS
TTCCAGTAATGTCAATATCC+TGG 0.487192 1_4:-59898794 None:intergenic
TGGCTATCTACGCCAGGATC+GGG 0.488311 1_4:+59896422 Msa0174290:CDS
GAACCTGACAGCTTACCTTC+AGG 0.489934 1_4:-59898674 None:intergenic
ACTAGAGATGATGGCGGAAG+AGG 0.490099 1_4:+59898386 Msa0174290:CDS
GGGACAGACTCACTTTGCCT+TGG 0.490392 1_4:-59901931 None:intergenic
GCTAGTTAATCACCGTTGGC+TGG 0.491106 1_4:+59897510 Msa0174290:CDS
AGATGAACCAATTCTTCATC+CGG 0.491955 1_4:-59899995 None:intergenic
TTTCCCGCGATCCACATACT+TGG 0.492525 1_4:-59902189 None:intergenic
GTACGAGCTTGCCAAGAGAT+TGG 0.493559 1_4:+59897477 Msa0174290:CDS
TCTAGAACCCAAAGTTCTCT+TGG 0.493789 1_4:-59899696 None:intergenic
TAGAGGAGAGAAGAAATGTT+GGG 0.493960 1_4:+59900431 Msa0174290:CDS
AAATAACTTAAATACCTGCT+TGG 0.501492 1_4:+59899331 Msa0174290:CDS
GGTTGAGTACGTCTGCAAGC+CGG 0.501698 1_4:+59901542 Msa0174290:CDS
CAACCTGAAGGTAAGCTGTC+AGG 0.502452 1_4:+59898671 Msa0174290:CDS
TTTCTTAAGTGCCAGTAGCC+AGG 0.503878 1_4:+59900864 Msa0174290:CDS
AATGGCGGTGGAGTTGATGC+GGG 0.504030 1_4:+59894337 Msa0174290:CDS
GAAGGTTCTGGGAAAGAAAC+TGG 0.504396 1_4:+59899086 Msa0174290:CDS
CAAACCGAGGTAGCATCAAC+AGG 0.505536 1_4:-59894582 None:intergenic
TGGCCATCGCCTACAGAGAA+AGG 0.506713 1_4:+59900576 Msa0174290:CDS
GCACTCATGCTTTGGCAGAT+AGG 0.508633 1_4:+59901595 Msa0174290:CDS
GAGGCGGAAGATTCCAAGCT+GGG 0.509729 1_4:+59898426 Msa0174290:CDS
ATTTACCAAACATCAAAGTA+AGG 0.510575 1_4:+59902105 Msa0174290:CDS
GGGCAAAACCAATCCTCCTC+AGG 0.510620 1_4:-59901834 None:intergenic
AAAACTACTCAGCGAGATGA+AGG 0.510675 1_4:+59899767 Msa0174290:CDS
GATGAGCCACCTGTGTCTGA+TGG 0.510751 1_4:+59899281 Msa0174290:CDS
CAGGTCATGGTGCCTTCTAT+GGG 0.513908 1_4:+59900998 Msa0174290:CDS
TGATCAAGCGTTTGAAAGGA+AGG 0.513959 1_4:+59900611 Msa0174290:CDS
GTTCTTATCACAGGACGATC+CGG 0.515315 1_4:+59894482 Msa0174290:intron
ATAATTCATTGCCTCAAAAG+AGG 0.515513 1_4:+59899132 Msa0174290:CDS
GGAGATTTGATGCTGATTTG+TGG 0.515683 1_4:+59902214 Msa0174290:CDS
GAAGTTAGCGAAATCGGAAA+AGG 0.517733 1_4:+59900228 Msa0174290:CDS
GTTGATGCGGGGAAGAACAC+TGG 0.518035 1_4:+59894349 Msa0174290:CDS
TTAATCAAGTCTAAAGATAG+TGG 0.518083 1_4:+59899476 Msa0174290:CDS
GGCAGAAGAGATTATTGAGG+AGG 0.521403 1_4:+59901641 Msa0174290:CDS
AGGATTGCAGCAATCGATAT+GGG 0.522430 1_4:-59902272 None:intergenic
GGAAAGAATTCAAAGAATGA+AGG 0.523294 1_4:+59899590 Msa0174290:CDS
TCAACTTCTACAAGTGCTGA+TGG 0.523391 1_4:+59898891 Msa0174290:CDS
GATGATGGCGGAAGAGGCTA+AGG 0.523468 1_4:+59898392 Msa0174290:CDS
CTGGCTATCTACGCCAGGAT+CGG 0.524351 1_4:+59896421 Msa0174290:CDS
TTTGGCACAGCTGTGACTCA+TGG 0.524555 1_4:+59898495 Msa0174290:CDS
CGTGCGGTCAAAGCTGGAGA+TGG 0.526398 1_4:+59901372 Msa0174290:CDS
ATCAAATGCCAATGTGTTGG+AGG 0.526782 1_4:-59899375 None:intergenic
GTGATTAACTAGCTTTATTG+TGG 0.528417 1_4:-59897500 None:intergenic
TTAAGTGCCAGTAGCCAGGC+AGG 0.529869 1_4:+59900868 Msa0174290:CDS
GGCTAAGGATTCTGAGGATG+AGG 0.530245 1_4:+59898407 Msa0174290:CDS
AATGAGACAAGAGATGAGGC+AGG 0.530559 1_4:+59900274 Msa0174290:CDS
AAAGCCATCCCAAATTCTAC+TGG 0.533698 1_4:+59898549 Msa0174290:CDS
AGATTTACCATTTGTTAGTG+GGG 0.534103 1_4:-59899231 None:intergenic
CGTACAGTACGTGTCTCTCA+AGG 0.534451 1_4:-59901572 None:intergenic
GTATGTGGATCGCGGGAAAG+AGG 0.535687 1_4:+59902193 Msa0174290:CDS
AAAGACTCTTCGATTACTAC+AGG 0.536651 1_4:+59898603 Msa0174290:CDS
GTAGAATGCAAAGAAACGTC+AGG 0.538051 1_4:-59898696 None:intergenic
CTTGACTGGCTATCTACGCC+AGG 0.538587 1_4:+59896416 Msa0174290:CDS
GGTTCCATTGGCTGTGGAGT+GGG 0.539135 1_4:+59902247 Msa0174290:CDS
TCCGCTGGCAGCTGTTCCTG+AGG 0.539542 1_4:+59901818 Msa0174290:CDS
GGTGATGAAACTGGTTCCAT+TGG 0.539624 1_4:+59902235 Msa0174290:CDS
TGGGCAAAACCAATCCTCCT+CGG 0.539703 1_4:-59902311 None:intergenic
GAAGTTAGAAGCAGTTGACC+AGG 0.539770 1_4:+59900048 Msa0174290:CDS
CAGGTGATCAAGCGTTTGAA+AGG 0.545429 1_4:+59900607 Msa0174290:CDS
AGTAGAGTTGGGAATGGCTC+CGG 0.546272 1_4:+59899976 Msa0174290:CDS
TTCACATTGATCTACTACCC+TGG 0.547336 1_4:-59898985 None:intergenic
GAAAGTGGTTCCGTTGGCTG+TGG 0.549655 1_4:+59901765 Msa0174290:CDS
TTCTAACTTCTCTTCTGCTG+AGG 0.549668 1_4:-59900035 None:intergenic
TGTGTTGCTGCGAGAGAGGA+TGG 0.552898 1_4:+59894507 Msa0174290:CDS
TTGCCAAGTATGTGGATCCC+TGG 0.553257 1_4:+59901710 Msa0174290:CDS
TAAGGCAGAAGAGATTATTG+AGG 0.553441 1_4:+59901638 Msa0174290:CDS
ACAGAGAAAGGAGTTTCAGC+AGG 0.553933 1_4:+59900588 Msa0174290:CDS
CTTATCAAATGCCAATGTGT+TGG 0.554180 1_4:-59899378 None:intergenic
TTGGGTTCTAGACCCAGAAA+AGG 0.554581 1_4:+59899707 Msa0174290:CDS
GGAGATGTCATGCTGATTTG+TGG 0.554732 1_4:+59901738 Msa0174290:CDS
CGACTGCTGCGATCCTCCGC+TGG 0.556838 1_4:+59901803 Msa0174290:CDS
ATGTCAATATCCTGGAAGCC+AGG 0.557352 1_4:-59898786 None:intergenic
TAAGCCGTTGGTCGCAAACA+AGG 0.557591 1_4:+59896586 Msa0174290:CDS
GACTATGCCATAGTTAGCCC+TGG 0.558059 1_4:+59901447 Msa0174290:CDS
AAATTGTCATCACGCAGATT+AGG 0.560313 1_4:-59898840 None:intergenic
GGTACCCACTCCACAGCCAA+TGG 0.560665 1_4:-59902251 None:intergenic
GGGTGCATTGTCTTCATCAA+AGG 0.560961 1_4:+59902384 Msa0174290:CDS
CATGACATCTCCTCTTTCCA+GGG 0.561920 1_4:-59901727 None:intergenic
TTGCCAAGTATGTGGATCGC+GGG 0.563072 1_4:+59902186 Msa0174290:CDS
TCCTCAGGAACAGCTGCCAG+CGG 0.564075 1_4:-59901819 None:intergenic
GCTGAAACTCCTTTCTCTGT+AGG 0.564808 1_4:-59900585 None:intergenic
TAATGGCGGTGGAGTTGATG+CGG 0.564836 1_4:+59894336 Msa0174290:CDS
AGAAACTGGTGTTATTCAAG+AGG 0.565350 1_4:+59899100 Msa0174290:CDS
AGACCGCTTAAAGATTTGGA+TGG 0.566779 1_4:+59896363 Msa0174290:CDS
GGTTCCGTTGGCTGTGGAGT+GGG 0.567218 1_4:+59901771 Msa0174290:CDS
GTAACCTTGTTTGCGACCAA+CGG 0.570120 1_4:-59896590 None:intergenic
CGAGGAGGTCATTCCTCATG+AGG 0.570925 1_4:+59902141 Msa0174290:CDS
TCAGGAACAGCTGCCAGCGG+AGG 0.571501 1_4:-59901816 None:intergenic
TGAGGCGGAAGATTCCAAGC+TGG 0.572135 1_4:+59898425 Msa0174290:CDS
GGGTGCATTGTCTTCATCCA+AGG 0.576286 1_4:+59901914 Msa0174290:CDS
ACTATAAGCAAAAGTCCCCT+AGG 0.576594 1_4:+59898465 Msa0174290:CDS
AATAGCAACTTCTGGTGTGA+AGG 0.576721 1_4:+59899817 Msa0174290:CDS
CATCTTGAGTGTTCATCACC+AGG 0.578167 1_4:+59899569 Msa0174290:CDS
GCCACTTAAAATAAAACATG+TGG 0.579555 1_4:-59900557 None:intergenic
CTGAAAACAAATATAACAAG+AGG 0.579867 1_4:+59897701 Msa0174290:CDS
CTGATTTGTGGTGATGAAAG+TGG 0.580324 1_4:+59901750 Msa0174290:CDS
GTATGTGGATCCCTGGAAAG+AGG 0.581862 1_4:+59901717 Msa0174290:CDS
TAAAGCTAGTTAATCACCGT+TGG 0.584487 1_4:+59897506 Msa0174290:CDS
GAAACTGGTTCCATTGGCTG+TGG 0.584504 1_4:+59902241 Msa0174290:CDS
CTTGAGAGACACGTACTGTA+CGG 0.584559 1_4:+59901573 Msa0174290:CDS
CGGCTGTTGAAAGAAAGAAC+AGG 0.584901 1_4:+59900979 Msa0174290:CDS
AGTGAGTATGCAGAAGATGC+TGG 0.586456 1_4:+59899899 Msa0174290:CDS
AATGCCTGTTGATGCTACCT+CGG 0.587295 1_4:+59894578 Msa0174290:CDS
TTACCTTCCTGATGCAGTAG+CGG 0.587895 1_4:-59900719 None:intergenic
CTAACAAATGGTAAATCTCA+AGG 0.589314 1_4:+59899236 Msa0174290:CDS
GATATAGCTTGCCAAGTATG+TGG 0.590227 1_4:+59901702 Msa0174290:CDS
TCCAAGCTGGGGCAATCAGG+GGG 0.590436 1_4:+59898438 Msa0174290:CDS
GAGTTCTCACTTATATCAGA+AGG 0.591107 1_4:-59900331 None:intergenic
CGATTCAAGCTTGTTAATGG+CGG 0.592256 1_4:+59894322 Msa0174290:CDS
ACTCCTTTCTCTGTAGGCGA+TGG 0.592552 1_4:-59900579 None:intergenic
GCTCAAGGGACAGACTCACT+TGG 0.593309 1_4:-59902407 None:intergenic
TTGAAAGAAAGAACAGGTCA+TGG 0.594190 1_4:+59900985 Msa0174290:CDS
TACTCGCTTTCTTGATACTG+GGG 0.595273 1_4:+59901422 Msa0174290:CDS
ATATGGAGGCTCCAAGAAAG+TGG 0.595831 1_4:+59900956 Msa0174290:CDS
AGCTTCTGCCTCCAACACAT+TGG 0.597432 1_4:+59899367 Msa0174290:CDS
GATGTAGCTTGCCAAGTATG+TGG 0.597538 1_4:+59902178 Msa0174290:CDS
GAGGTTGAGTCTAACTCTGA+AGG 0.599018 1_4:-59900136 None:intergenic
TTCCAAGCTGGGGCAATCAG+GGG 0.599814 1_4:+59898437 Msa0174290:CDS
AGATGTTGGTGACTGCATTG+TGG 0.600644 1_4:+59894532 Msa0174290:CDS
GCTGGCAGCTGTTCCTGAGG+AGG 0.600700 1_4:+59901821 Msa0174290:CDS
GTCAAAATCTCTAAGAGAGG+AGG 0.602945 1_4:+59898521 Msa0174290:CDS
TGGACCAGTAGAATTTGGGA+TGG 0.603738 1_4:-59898553 None:intergenic
TAGTGGTGAGCCTGATGCAA+CGG 0.604279 1_4:+59899493 Msa0174290:CDS
TGGTTCCGTTGGCTGTGGAG+TGG 0.604568 1_4:+59901770 Msa0174290:CDS
CAAGGTAGAAAAGGCAAGTG+AGG 0.606134 1_4:+59899043 Msa0174290:CDS
GATCAAGCGTTTGAAAGGAA+GGG 0.612539 1_4:+59900612 Msa0174290:CDS
TGCGGATTTAGAAACCAAGC+AGG 0.612594 1_4:-59899345 None:intergenic
GTTGAACATAGTGCTGATGT+TGG 0.612914 1_4:+59894555 Msa0174290:CDS
AAATCCCAATTATCAAGACC+AGG 0.613763 1_4:-59899617 None:intergenic
TTGGCAGCTGACTTCTTGCG+CGG 0.614710 1_4:-59899677 None:intergenic
AGTACCCACTCCACAGCCAA+CGG 0.616922 1_4:-59901775 None:intergenic
TCATCGTCGCGATCCTCATG+AGG 0.617058 1_4:-59901672 None:intergenic
ATGTGAAGTAGAGTTGGGAA+TGG 0.617643 1_4:+59899970 Msa0174290:CDS
AATCGACACGTGGCATGCCA+GGG 0.619056 1_4:-59901464 None:intergenic
TGTGTTGGAGGCAGAAGCTG+CGG 0.620092 1_4:-59899363 None:intergenic
TTGAGTACGTCTGCAAGCCG+GGG 0.621599 1_4:+59901544 Msa0174290:CDS
TTTCAATTCAAGTCTTCTCG+AGG 0.622010 1_4:+59894068 Msa0174290:five_prime_UTR
GTACAGTACGTGTCTCTCAA+GGG 0.622673 1_4:-59901571 None:intergenic
GGTGGCTCATCAACCACAGA+TGG 0.622968 1_4:-59899269 None:intergenic
GGTGATGAAAGTGGTTCCGT+TGG 0.623291 1_4:+59901759 Msa0174290:CDS
GGTGTGTGTTGCTGCGAGAG+AGG 0.626024 1_4:+59894503 Msa0174290:CDS
TCATCATTGCAACCCTCATG+AGG 0.626300 1_4:-59902154 None:intergenic
AGACCAAATGATGAAGAGCA+TGG 0.627980 1_4:+59900406 Msa0174290:CDS
TGGTTCCATTGGCTGTGGAG+TGG 0.628638 1_4:+59902246 Msa0174290:CDS
GCATAATATTAGCAACCTGA+AGG 0.628689 1_4:+59898659 Msa0174290:CDS
AAGTAGTCCGCTACAACACA+AGG 0.628899 1_4:-59901519 None:intergenic
TCAAGAAAGCGAGTATAAGG+AGG 0.629991 1_4:-59901414 None:intergenic
TCCAAATGAGACAAGAGATG+AGG 0.630653 1_4:+59900270 Msa0174290:CDS
TTGCCGCTACTGCATCAGGA+AGG 0.631958 1_4:+59900716 Msa0174290:CDS
ATCGGAAAAGGCAGTATTTG+GGG 0.632673 1_4:+59900240 Msa0174290:CDS
TTGTTAACATCAAGGATTTG+GGG 0.635516 1_4:-59899854 None:intergenic
GCACATTCAGATGAAAAGCT+CGG 0.636983 1_4:+59898918 Msa0174290:CDS
ATCGTCAAAATCTCTAAGAG+AGG 0.640134 1_4:+59898518 Msa0174290:CDS
GGAAGAGGCTAAGGATTCTG+AGG 0.640663 1_4:+59898401 Msa0174290:CDS
GGCAGAAGAGATTATCGAGG+AGG 0.641305 1_4:+59902126 Msa0174290:CDS
TCCTCGGGAATAGCTGTCAG+CGG 0.641403 1_4:-59902295 None:intergenic
TTTGCCGTGATTCTCATCAG+TGG 0.642588 1_4:+59900635 Msa0174290:CDS
CTTGCCAAGTATGTGGATCG+CGG 0.642622 1_4:+59902185 Msa0174290:CDS
GGCAGGAAAATTATTGCCAG+AGG 0.644253 1_4:+59900885 Msa0174290:CDS
ATGAGACAAGAGATGAGGCA+GGG 0.645233 1_4:+59900275 Msa0174290:CDS
TCGTCGCGATCCTCATGAGG+AGG 0.645323 1_4:-59901669 None:intergenic
GAAAGAAAGCCATCAGACAC+AGG 0.645551 1_4:-59899290 None:intergenic
ACAGGATACTCTTAAGCGTG+CGG 0.647401 1_4:+59901356 Msa0174290:intron
ATTCCATCCAAATCTTTAAG+CGG 0.647811 1_4:-59896366 None:intergenic
GAGAGAGGATGGAAAGATGT+TGG 0.648494 1_4:+59894518 Msa0174290:CDS
GGAGGTTATTCCTCCTCATG+AGG 0.650168 1_4:+59901659 Msa0174290:CDS
TGAGATACCTTGTGTTGTAG+CGG 0.650742 1_4:+59901512 Msa0174290:CDS
ATACAAATTCATCTGGTCTG+CGG 0.652892 1_4:+59898817 Msa0174290:CDS
TAAGGATTCTGAGGATGAGG+CGG 0.653839 1_4:+59898410 Msa0174290:CDS
TCTCTCGCAGCAACACACAC+CGG 0.655994 1_4:-59894501 None:intergenic
TCCGCTGACAGCTATTCCCG+AGG 0.660558 1_4:+59902294 Msa0174290:CDS
GATCAATGTGAAGACAGAGA+AGG 0.661317 1_4:+59898996 Msa0174290:CDS
TCGGGAATAGCTGTCAGCGG+AGG 0.663496 1_4:-59902292 None:intergenic
ATGACCACTGATGAGAATCA+CGG 0.663566 1_4:-59900639 None:intergenic
GGACGGTGCCATCAATATGG+AGG 0.665513 1_4:+59900942 Msa0174290:CDS
GAGGAGGTCATTCCTCATGA+GGG 0.666729 1_4:+59902142 Msa0174290:CDS
TAAGGCAGAAGAGATTATCG+AGG 0.671246 1_4:+59902123 Msa0174290:CDS
AGGCGGAAGATTCCAAGCTG+GGG 0.675147 1_4:+59898427 Msa0174290:CDS
AGGATCGAAAGTGCCATCTG+TGG 0.676967 1_4:+59899256 Msa0174290:CDS
ATGGCGGTGGAGTTGATGCG+GGG 0.679578 1_4:+59894338 Msa0174290:CDS
TGGAGGCTCCAAGAAAGTGG+CGG 0.683408 1_4:+59900959 Msa0174290:CDS
TGCCAGAGGAGCCTTATGAG+TGG 0.683644 1_4:+59900899 Msa0174290:CDS
TAGCTCCAGATCCTATAAGG+AGG 0.687705 1_4:+59900680 Msa0174290:CDS
CATACCAATCTTCCAGCCAA+CGG 0.689524 1_4:-59897522 None:intergenic
TCTTGAAACCCCTTCCACCA+AGG 0.691814 1_4:+59899025 Msa0174290:CDS
AGAAAGCCATCAGACACAGG+TGG 0.698252 1_4:-59899287 None:intergenic
GCTGACAGCTATTCCCGAGG+AGG 0.706393 1_4:+59902297 Msa0174290:CDS
TGGACCCACAAATCGACACG+TGG 0.713655 1_4:-59901474 None:intergenic
TGATGAACACTCAAGATGTG+TGG 0.746588 1_4:-59899564 None:intergenic
TGTCTCTCAAGGGAGAACCC+CGG 0.757252 1_4:-59901561 None:intergenic
GAGTATGCAGAAGATGCTGG+TGG 0.768912 1_4:+59899902 Msa0174290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCATTATAGATTATTAA+CGG + chr1_4:59896709-59896728 Msa0174290:intron 10.0%
!!! AATTATTTTCATTTACTAAT+GGG - chr1_4:59896792-59896811 None:intergenic 10.0%
!!! TAATTATTTTCATTTACTAA+TGG - chr1_4:59896793-59896812 None:intergenic 10.0%
!! ATTTCAAAAAACAATTTAAA+AGG - chr1_4:59897439-59897458 None:intergenic 10.0%
!!! TTAAATTGTTTTTTGAAATT+TGG + chr1_4:59897440-59897459 Msa0174290:intron 10.0%
!!! ATTTTTTTAAATTTTCGATC+TGG + chr1_4:59894246-59894265 Msa0174290:intron 15.0%
!! ATTCAAAAGAAAAAGAAATA+GGG - chr1_4:59894424-59894443 None:intergenic 15.0%
!! AATTCAAAAGAAAAAGAAAT+AGG - chr1_4:59894425-59894444 None:intergenic 15.0%
!! CATTCAATCAATAATTAAAA+GGG - chr1_4:59894954-59894973 None:intergenic 15.0%
!!! CTTTTAATTATTGATTGAAT+GGG + chr1_4:59894953-59894972 Msa0174290:intron 15.0%
!!! AATATAATACTTTGTTTGAT+AGG + chr1_4:59895689-59895708 Msa0174290:intron 15.0%
!!! ATATAATACTTTGTTTGATA+GGG + chr1_4:59895690-59895709 Msa0174290:intron 15.0%
!! TAATAATCTATAATGAAAAG+CGG - chr1_4:59896708-59896727 None:intergenic 15.0%
!!! TAAGTGATAATTTTGTAATT+TGG - chr1_4:59897222-59897241 None:intergenic 15.0%
!! GTGAAATTCTATTTATAATA+TGG - chr1_4:59897739-59897758 None:intergenic 15.0%
!! ATACAAAATAAATTTCAAAG+GGG - chr1_4:59901200-59901219 None:intergenic 15.0%
!! CATACAAAATAAATTTCAAA+GGG - chr1_4:59901201-59901220 None:intergenic 15.0%
!! ACATACAAAATAAATTTCAA+AGG - chr1_4:59901202-59901221 None:intergenic 15.0%
!! AAAAGTCAATAAAAGTAAAA+AGG + chr1_4:59902363-59902382 Msa0174290:CDS 15.0%
!! AAAGTCAATAAAAGTAAAAA+GGG + chr1_4:59902364-59902383 Msa0174290:CDS 15.0%
!! AAATTCAAACAAAACATCAA+CGG - chr1_4:59894626-59894645 None:intergenic 20.0%
!!! GTTTGAATTTGAATTCATTT+TGG + chr1_4:59894636-59894655 Msa0174290:intron 20.0%
!! CTCATTAATACAAATGAAAA+TGG - chr1_4:59894820-59894839 None:intergenic 20.0%
!! CCATTCAATCAATAATTAAA+AGG - chr1_4:59894955-59894974 None:intergenic 20.0%
!!! CCTTTTAATTATTGATTGAA+TGG + chr1_4:59894952-59894971 Msa0174290:intron 20.0%
!! GTTCTATTTATAAGCTAATA+AGG + chr1_4:59895107-59895126 Msa0174290:intron 20.0%
!! AGATTAGAAATGAATGTATT+TGG + chr1_4:59895488-59895507 Msa0174290:intron 20.0%
!!! TATAATACTTTGTTTGATAG+GGG + chr1_4:59895691-59895710 Msa0174290:intron 20.0%
!!! ATCTATCACATTTTTTGAAA+GGG - chr1_4:59895897-59895916 None:intergenic 20.0%
!!! AATCTATCACATTTTTTGAA+AGG - chr1_4:59895898-59895917 None:intergenic 20.0%
!!! AGTGAATTTTGTCAATATAT+CGG - chr1_4:59896877-59896896 None:intergenic 20.0%
!! ACAAAATTCACTAAACTATA+GGG + chr1_4:59896885-59896904 Msa0174290:intron 20.0%
!! AAAAATTTAGTGACTATGTT+AGG + chr1_4:59896959-59896978 Msa0174290:intron 20.0%
!!! TTTTCATCCTTATAAATAAG+AGG - chr1_4:59897142-59897161 None:intergenic 20.0%
!! TATTCTTACACATCAATAAT+GGG - chr1_4:59897401-59897420 None:intergenic 20.0%
!! ATATTCTTACACATCAATAA+TGG - chr1_4:59897402-59897421 None:intergenic 20.0%
!!! TTTTTTGAAATTTGGTTTAC+AGG + chr1_4:59897448-59897467 Msa0174290:intron 20.0%
!!! TTTTTGAAATTTGGTTTACA+GGG + chr1_4:59897449-59897468 Msa0174290:intron 20.0%
!! TTTAAATACATGAGATTTCA+TGG - chr1_4:59897587-59897606 None:intergenic 20.0%
!! AATCTCATGTATTTAAATTG+TGG + chr1_4:59897590-59897609 Msa0174290:intron 20.0%
!!! GTTTTTATGATAGAACATTA+TGG + chr1_4:59897774-59897793 Msa0174290:intron 20.0%
!! TGATTATTAATAAACGTTAC+CGG - chr1_4:59897868-59897887 None:intergenic 20.0%
!! GTAACGTTTATTAATAATCA+TGG + chr1_4:59897868-59897887 Msa0174290:intron 20.0%
!! ATAAATTGTCTAACTAATCT+CGG + chr1_4:59900812-59900831 Msa0174290:intron 20.0%
!! TACAAAATAAATTTCAAAGG+GGG - chr1_4:59901199-59901218 None:intergenic 20.0%
!! TAAATCTTGATTTACACATT+TGG + chr1_4:59902058-59902077 Msa0174290:intron 20.0%
!! AAATCTTGATTTACACATTT+GGG + chr1_4:59902059-59902078 Msa0174290:intron 20.0%
!! TTTTAAATTTTCGATCTGGA+AGG + chr1_4:59894250-59894269 Msa0174290:intron 25.0%
!!! CAGCAAGTAAAATTTTGAAA+TGG + chr1_4:59894743-59894762 Msa0174290:intron 25.0%
!!! AAACCTTAAACGTTTTGAAA+TGG - chr1_4:59894869-59894888 None:intergenic 25.0%
!!! AAATGACACTCATTTTGAAA+CGG + chr1_4:59895017-59895036 Msa0174290:intron 25.0%
!!! GAAATGTTGGACTTTAAAAT+GGG + chr1_4:59895194-59895213 Msa0174290:intron 25.0%
! TCTAGTACAAAATACAAAGT+CGG - chr1_4:59895276-59895295 None:intergenic 25.0%
! ATTCACATATTTCAAAACGT+AGG + chr1_4:59895295-59895314 Msa0174290:intron 25.0%
!! ATGAAATTTTGGATGCTATA+AGG - chr1_4:59895385-59895404 None:intergenic 25.0%
!! TGGCATTTCATATGAAATTT+TGG - chr1_4:59895396-59895415 None:intergenic 25.0%
! CATACTTATTATCCACTTAT+TGG - chr1_4:59895416-59895435 None:intergenic 25.0%
! GAATGTATTTGGTAAATAGT+TGG + chr1_4:59895499-59895518 Msa0174290:intron 25.0%
!! TTTTTCTTTCCTCTTTTACT+TGG - chr1_4:59895564-59895583 None:intergenic 25.0%
! GAACTCAAAAATTGTATTAG+AGG + chr1_4:59895769-59895788 Msa0174290:intron 25.0%
!!! AATTCATTTAGGCTTTGTTT+GGG - chr1_4:59895973-59895992 None:intergenic 25.0%
!!! AAATTCATTTAGGCTTTGTT+TGG - chr1_4:59895974-59895993 None:intergenic 25.0%
! CAAAGCCTAAATGAATTTAT+TGG + chr1_4:59895976-59895995 Msa0174290:intron 25.0%
! CACACTTAAAAATGAACTTA+TGG + chr1_4:59896148-59896167 Msa0174290:intron 25.0%
!!! TTATCATATTGATTTTGTCC+AGG + chr1_4:59896474-59896493 Msa0174290:intron 25.0%
! CTAATATGCTACAAATTTGA+AGG + chr1_4:59896617-59896636 Msa0174290:CDS 25.0%
! TTCATTATTCAGAGATGAAA+TGG - chr1_4:59896745-59896764 None:intergenic 25.0%
! TATAAATCTGACAAAACGTT+GGG - chr1_4:59896839-59896858 None:intergenic 25.0%
! ATATAAATCTGACAAAACGT+TGG - chr1_4:59896840-59896859 None:intergenic 25.0%
! GACAAAATTCACTAAACTAT+AGG + chr1_4:59896884-59896903 Msa0174290:intron 25.0%
! TGTTAACAATAAAACTTCAG+TGG - chr1_4:59897024-59897043 None:intergenic 25.0%
! ACAGAAAAATGAAATACACA+AGG + chr1_4:59897041-59897060 Msa0174290:intron 25.0%
! CAGAAAAATGAAATACACAA+GGG + chr1_4:59897042-59897061 Msa0174290:intron 25.0%
!!! TTTTCCTCCTCTTATTTATA+AGG + chr1_4:59897132-59897151 Msa0174290:intron 25.0%
! CTGTTAATGTAATTCACTTA+GGG - chr1_4:59897193-59897212 None:intergenic 25.0%
! AAGATCTGAAAGGTTTATTT+AGG - chr1_4:59897261-59897280 None:intergenic 25.0%
! GTGTAATTTCAGGAAAAAAA+TGG + chr1_4:59897368-59897387 Msa0174290:intron 25.0%
!!! TTTTGAAATTTGGTTTACAG+GGG + chr1_4:59897450-59897469 Msa0174290:intron 25.0%
!!! CTCTTGTTATATTTGTTTTC+AGG - chr1_4:59897703-59897722 None:intergenic 25.0%
! CTGAAAACAAATATAACAAG+AGG + chr1_4:59897701-59897720 Msa0174290:CDS 25.0%
! GTAAATGATTATCAGATCTT+AGG - chr1_4:59898284-59898303 None:intergenic 25.0%
! ATTAGTTGAAATGGATAACA+TGG - chr1_4:59898329-59898348 None:intergenic 25.0%
! AGTTGAGTAATTAGTTGAAA+TGG - chr1_4:59898338-59898357 None:intergenic 25.0%
!!! GATCTTTCTTGATTTTAGTT+TGG - chr1_4:59899180-59899199 None:intergenic 25.0%
! AAATAACTTAAATACCTGCT+TGG + chr1_4:59899331-59899350 Msa0174290:CDS 25.0%
! TTAATCAAGTCTAAAGATAG+TGG + chr1_4:59899476-59899495 Msa0174290:CDS 25.0%
! TTTGTTAACATCAAGGATTT+GGG - chr1_4:59899858-59899877 None:intergenic 25.0%
!! ATTTGTTAACATCAAGGATT+TGG - chr1_4:59899859-59899878 None:intergenic 25.0%
!!! GTTTCATTTGTGACTTTTTT+AGG - chr1_4:59900100-59900119 None:intergenic 25.0%
!!! ATGTTTTACTTTTAACTTCG+AGG - chr1_4:59900158-59900177 None:intergenic 25.0%
!!! AAATTCTCGAGCTTATTTTT+TGG - chr1_4:59900364-59900383 None:intergenic 25.0%
!! GAATTTTATTGAAGAGGAAA+AGG + chr1_4:59900378-59900397 Msa0174290:CDS 25.0%
! TCCATCTATATCAGAATTTA+AGG + chr1_4:59900516-59900535 Msa0174290:CDS 25.0%
! AAAATAAAACATGTGGTTTC+AGG - chr1_4:59900553-59900572 None:intergenic 25.0%
!!! ACCACATGTTTTATTTTAAG+TGG + chr1_4:59900556-59900575 Msa0174290:CDS 25.0%
! GAACACATTATACAGAATTA+CGG - chr1_4:59900774-59900793 None:intergenic 25.0%
! TAAATTGTCTAACTAATCTC+GGG + chr1_4:59900813-59900832 Msa0174290:intron 25.0%
! ATTGAAGAAAAACATACCAA+AGG - chr1_4:59901060-59901079 None:intergenic 25.0%
!! TTTGGTATGTTTTTCTTCAA+TGG + chr1_4:59901059-59901078 Msa0174290:intron 25.0%
! AAATGTTTGTAGTTAGTAGT+TGG + chr1_4:59901083-59901102 Msa0174290:intron 25.0%
! ATTTGCAAAACTTCAAAGTA+AGG + chr1_4:59901620-59901639 Msa0174290:CDS 25.0%
! AAAACCCAATAAAAGGAAAA+AGG + chr1_4:59901893-59901912 Msa0174290:CDS 25.0%
! AAACCCAATAAAAGGAAAAA+GGG + chr1_4:59901894-59901913 Msa0174290:CDS 25.0%
! AATGACCTAAAATCCATTAA+GGG - chr1_4:59902088-59902107 None:intergenic 25.0%
! AAATGACCTAAAATCCATTA+AGG - chr1_4:59902089-59902108 None:intergenic 25.0%
! ATTTACCAAACATCAAAGTA+AGG + chr1_4:59902105-59902124 Msa0174290:CDS 25.0%
!! TTTGGATTCTAATGCATTTT+GGG - chr1_4:59902333-59902352 None:intergenic 25.0%
!! TTTTGGATTCTAATGCATTT+TGG - chr1_4:59902334-59902353 None:intergenic 25.0%
!!! TGACTTTTTTTGAGCATTTT+TGG - chr1_4:59902351-59902370 None:intergenic 25.0%
GAAAAATGAAAACGAGTTTG+TGG - chr1_4:59894111-59894130 None:intergenic 30.0%
!! ATTCGATTCAAGCTTGTTAA+TGG + chr1_4:59894319-59894338 Msa0174290:CDS 30.0%
! GAATTTTGTGTTCTTATCAC+AGG + chr1_4:59894473-59894492 Msa0174290:intron 30.0%
!! AAACATGGCTTTATAATGCA+TGG + chr1_4:59894784-59894803 Msa0174290:intron 30.0%
ATACAAATGAAAATGGCAAC+AGG - chr1_4:59894813-59894832 None:intergenic 30.0%
!!! CTTAAACGTTTTGAAATGGA+GGG - chr1_4:59894865-59894884 None:intergenic 30.0%
! TATTGATTGAATGGGACAAT+TGG + chr1_4:59894961-59894980 Msa0174290:intron 30.0%
TAAGCTAATAAGGAGATTGA+TGG + chr1_4:59895117-59895136 Msa0174290:intron 30.0%
AAGCTAATAAGGAGATTGAT+GGG + chr1_4:59895118-59895137 Msa0174290:intron 30.0%
TTTCAGTTGAGAGTAACTAT+AGG + chr1_4:59895156-59895175 Msa0174290:intron 30.0%
TACTCATTTGTAGGAAATGT+TGG + chr1_4:59895181-59895200 Msa0174290:intron 30.0%
! GGAAATGTTGGACTTTAAAA+TGG + chr1_4:59895193-59895212 Msa0174290:intron 30.0%
CCAATCATCCAATCAAAATT+GGG - chr1_4:59895324-59895343 None:intergenic 30.0%
ACCAATCATCCAATCAAAAT+TGG - chr1_4:59895325-59895344 None:intergenic 30.0%
TCATATGAAATGCCAATAAG+TGG + chr1_4:59895401-59895420 Msa0174290:intron 30.0%
AAAACAGTAGAAAACCTATG+TGG + chr1_4:59895580-59895599 Msa0174290:intron 30.0%
!!! ACTCTAAGGCTTTGTTATTT+TGG + chr1_4:59895615-59895634 Msa0174290:intron 30.0%
!!! TAAGGCTTTGTTATTTTGGA+GGG + chr1_4:59895619-59895638 Msa0174290:intron 30.0%
AATACAAAACCCACATCATT+TGG + chr1_4:59895744-59895763 Msa0174290:intron 30.0%
ATACAAAACCCACATCATTT+GGG + chr1_4:59895745-59895764 Msa0174290:intron 30.0%
CTCAAAAATTGTATTAGAGG+AGG + chr1_4:59895772-59895791 Msa0174290:intron 30.0%
AGCCTAAATGAATTTATTGG+AGG + chr1_4:59895979-59895998 Msa0174290:intron 30.0%
AGCCTCCAATAAATTCATTT+AGG - chr1_4:59895984-59896003 None:intergenic 30.0%
AGTTTGAGAATGACATTGTT+TGG + chr1_4:59896005-59896024 Msa0174290:intron 30.0%
ATTCCATCCAAATCTTTAAG+CGG - chr1_4:59896369-59896388 None:intergenic 30.0%
TAAAGATTTGGATGGAATTC+CGG + chr1_4:59896371-59896390 Msa0174290:CDS 30.0%
AAATATGGTGAGATCAAGTA+CGG - chr1_4:59896523-59896542 None:intergenic 30.0%
! GTTCGTTTCATCTTTGTTAT+TGG + chr1_4:59896639-59896658 Msa0174290:intron 30.0%
TTATTCAGAGATGAAATGGA+TGG - chr1_4:59896741-59896760 None:intergenic 30.0%
GGGACTACTTATAAAACATA+AGG - chr1_4:59896819-59896838 None:intergenic 30.0%
TCATCCTTATAAATAAGAGG+AGG - chr1_4:59897139-59897158 None:intergenic 30.0%
GCTGTTAATGTAATTCACTT+AGG - chr1_4:59897194-59897213 None:intergenic 30.0%
TGAAAGGTTTATTTAGGAAG+GGG - chr1_4:59897255-59897274 None:intergenic 30.0%
CTGAAAGGTTTATTTAGGAA+GGG - chr1_4:59897256-59897275 None:intergenic 30.0%
TCTGAAAGGTTTATTTAGGA+AGG - chr1_4:59897257-59897276 None:intergenic 30.0%
AAAGTGATAAGTAGTCTGTT+AGG - chr1_4:59897320-59897339 None:intergenic 30.0%
! ATTAAGAGAGGTGTAATTTC+AGG + chr1_4:59897358-59897377 Msa0174290:intron 30.0%
!! GTGATTAACTAGCTTTATTG+TGG - chr1_4:59897503-59897522 None:intergenic 30.0%
TCCTTGTCAAACAAGAATAA+AGG - chr1_4:59897552-59897571 None:intergenic 30.0%
TGTTAATTTCTTCAGCTTGA+AGG + chr1_4:59897663-59897682 Msa0174290:intron 30.0%
TAGAACATTATGGCGTAATT+TGG + chr1_4:59897784-59897803 Msa0174290:intron 30.0%
! GATATGTTAGCTTAAATGAG+TGG + chr1_4:59897949-59897968 Msa0174290:intron 30.0%
TTTGTTGCTGAGAAAAAAGA+CGG + chr1_4:59898114-59898133 Msa0174290:intron 30.0%
!!! CTGATTGATTTTAAAGCATC+TGG + chr1_4:59898164-59898183 Msa0174290:intron 30.0%
TCTAATTCATTCTCAAACAG+TGG + chr1_4:59898357-59898376 Msa0174290:intron 30.0%
! AGTTTTTCCAAATGCCAATA+AGG + chr1_4:59898578-59898597 Msa0174290:CDS 30.0%
! GTTTTTCCAAATGCCAATAA+GGG + chr1_4:59898579-59898598 Msa0174290:CDS 30.0%
AGCTACATGAATCATATGTT+AGG + chr1_4:59898727-59898746 Msa0174290:CDS 30.0%
!!! TAAGAATGCTGATTTTCCAA+AGG + chr1_4:59898761-59898780 Msa0174290:CDS 30.0%
ACTGGAAATACAAATTCATC+TGG + chr1_4:59898810-59898829 Msa0174290:CDS 30.0%
TCTTGTGTAACTTAACTTCT+TGG - chr1_4:59898871-59898890 None:intergenic 30.0%
! TATTCTAGGAAGAACCAAAA+AGG + chr1_4:59898951-59898970 Msa0174290:CDS 30.0%
! ATTCTAGGAAGAACCAAAAA+GGG + chr1_4:59898952-59898971 Msa0174290:CDS 30.0%
ATAATTCATTGCCTCAAAAG+AGG + chr1_4:59899132-59899151 Msa0174290:CDS 30.0%
! AGATTTACCATTTGTTAGTG+GGG - chr1_4:59899234-59899253 None:intergenic 30.0%
! GAGATTTACCATTTGTTAGT+GGG - chr1_4:59899235-59899254 None:intergenic 30.0%
! TGAGATTTACCATTTGTTAG+TGG - chr1_4:59899236-59899255 None:intergenic 30.0%
CTAACAAATGGTAAATCTCA+AGG + chr1_4:59899236-59899255 Msa0174290:CDS 30.0%
TTTCTTTCTGTTGACAAAGA+TGG + chr1_4:59899305-59899324 Msa0174290:CDS 30.0%
TCATTCTTTGAATTCTTTCC+TGG - chr1_4:59899590-59899609 None:intergenic 30.0%
GGAAAGAATTCAAAGAATGA+AGG + chr1_4:59899590-59899609 Msa0174290:CDS 30.0%
!! ATTTCCTGGTCTTGATAATT+GGG + chr1_4:59899613-59899632 Msa0174290:CDS 30.0%
TTGTTAACATCAAGGATTTG+GGG - chr1_4:59899857-59899876 None:intergenic 30.0%
!! CCATCAATTTGTTAACATCA+AGG - chr1_4:59899865-59899884 None:intergenic 30.0%
CCTTGATGTTAACAAATTGA+TGG + chr1_4:59899862-59899881 Msa0174290:CDS 30.0%
!!! CTTCTTCACATTTTTTATCC+TGG - chr1_4:59900069-59900088 None:intergenic 30.0%
!!! TCATTTGTGACTTTTTTAGG+AGG - chr1_4:59900097-59900116 None:intergenic 30.0%
GCCTTAAATTCTGATATAGA+TGG - chr1_4:59900520-59900539 None:intergenic 30.0%
GCCACTTAAAATAAAACATG+TGG - chr1_4:59900560-59900579 None:intergenic 30.0%
AATAAATTTCAAAGGGGGTT+GGG - chr1_4:59901194-59901213 None:intergenic 30.0%
AAATAAATTTCAAAGGGGGT+TGG - chr1_4:59901195-59901214 None:intergenic 30.0%
! ATTTTCTTTTCGCCTTCATA+AGG + chr1_4:59901222-59901241 Msa0174290:intron 30.0%
! TTTTCTTTTCGCCTTCATAA+GGG + chr1_4:59901223-59901242 Msa0174290:intron 30.0%
ATCCAACTTAATTGTTTCAC+AGG + chr1_4:59901338-59901357 Msa0174290:intron 30.0%
ATCCTGTGAAACAATTAAGT+TGG - chr1_4:59901343-59901362 None:intergenic 30.0%
!!! TCTCATGTTTTAAGAACTCT+TGG - chr1_4:59901497-59901516 None:intergenic 30.0%
GCTCAAAAAAACCCAATAAA+AGG + chr1_4:59901886-59901905 Msa0174290:CDS 30.0%
ACATGTTGACAGATTCAAAA+GGG - chr1_4:59901954-59901973 None:intergenic 30.0%
TACATGTTGACAGATTCAAA+AGG - chr1_4:59901955-59901974 None:intergenic 30.0%
CGAGAAGACTTGAATTGAAA+TGG - chr1_4:59894068-59894087 None:intergenic 35.0%
TTTCAATTCAAGTCTTCTCG+AGG + chr1_4:59894068-59894087 Msa0174290:five_prime_UTR 35.0%
AAGAAAGAAGAAACAAACCG+AGG - chr1_4:59894598-59894617 None:intergenic 35.0%
ATGTTTGCGCAAAGTAAACA+TGG + chr1_4:59894769-59894788 Msa0174290:intron 35.0%
!!! CCTTAAACGTTTTGAAATGG+AGG - chr1_4:59894866-59894885 None:intergenic 35.0%
CCTCCATTTCAAAACGTTTA+AGG + chr1_4:59894863-59894882 Msa0174290:intron 35.0%
CTATAGGACTACTCATTTGT+AGG + chr1_4:59895172-59895191 Msa0174290:intron 35.0%
CAGTCACATAATTAGCCAAT+TGG + chr1_4:59895244-59895263 Msa0174290:intron 35.0%
ATCATCCAATCAAAATTGGG+AGG - chr1_4:59895321-59895340 None:intergenic 35.0%
!!! CCCAATTTTGATTGGATGAT+TGG + chr1_4:59895321-59895340 Msa0174290:intron 35.0%
TAGCTCATTTATCCAACTCA+AGG - chr1_4:59895457-59895476 None:intergenic 35.0%
TTGGAACTTCTGTTCTCATT+AGG - chr1_4:59895545-59895564 None:intergenic 35.0%
ACAGAAGTTCCAAGTAAAAG+AGG + chr1_4:59895552-59895571 Msa0174290:intron 35.0%
! GTGAAGAATTTTCTCCACAT+AGG - chr1_4:59895597-59895616 None:intergenic 35.0%
GGAGAAAATTCTTCACTCTA+AGG + chr1_4:59895601-59895620 Msa0174290:intron 35.0%
!!! CTAAGGCTTTGTTATTTTGG+AGG + chr1_4:59895618-59895637 Msa0174290:intron 35.0%
!!! AAGGCTTTGTTATTTTGGAG+GGG + chr1_4:59895620-59895639 Msa0174290:intron 35.0%
!!! TTTGTTATTTTGGAGGGGAA+TGG + chr1_4:59895625-59895644 Msa0174290:intron 35.0%
!!! AGGGTTTTGGAAAAAAAGGA+AGG + chr1_4:59895653-59895672 Msa0174290:intron 35.0%
GAAAAAAAGGAAGGAACAAG+AGG + chr1_4:59895662-59895681 Msa0174290:intron 35.0%
TACAAAACCCACATCATTTG+GGG + chr1_4:59895746-59895765 Msa0174290:intron 35.0%
ATTGTATTAGAGGAGGACTT+TGG + chr1_4:59895779-59895798 Msa0174290:intron 35.0%
CTTGGAAATATAGGGGAAAA+TGG - chr1_4:59895924-59895943 None:intergenic 35.0%
CTTATGCTAACTCACTTAGA+TGG + chr1_4:59896030-59896049 Msa0174290:intron 35.0%
AACTTATGGATCAAAACACG+AGG + chr1_4:59896162-59896181 Msa0174290:intron 35.0%
! AATCGTGTTTTCCATTTACC+AGG + chr1_4:59896332-59896351 Msa0174290:intron 35.0%
AAAGATTTGGATGGAATTCC+GGG + chr1_4:59896372-59896391 Msa0174290:CDS 35.0%
TAACAAAGCATATAAGCTCC+TGG - chr1_4:59896495-59896514 None:intergenic 35.0%
TTGTCTGAAGAGGGAAAATA+TGG - chr1_4:59896538-59896557 None:intergenic 35.0%
! TATTTTCCCTCTTCAGACAA+TGG + chr1_4:59896538-59896557 Msa0174290:intron 35.0%
ATTTACTAATGGGACGAAGT+AGG - chr1_4:59896782-59896801 None:intergenic 35.0%
ACAAAACGTGAGGGATTATT+AGG + chr1_4:59896926-59896945 Msa0174290:intron 35.0%
TAGTGACTATGTTAGGTTTC+TGG + chr1_4:59896966-59896985 Msa0174290:intron 35.0%
AGTGACTATGTTAGGTTTCT+GGG + chr1_4:59896967-59896986 Msa0174290:intron 35.0%
TGTAATTCACTTAGGGTAGT+TGG - chr1_4:59897186-59897205 None:intergenic 35.0%
ACCTTTCAGATCTTCTTTGA+AGG + chr1_4:59897267-59897286 Msa0174290:intron 35.0%
CCTTTCAGATCTTCTTTGAA+GGG + chr1_4:59897268-59897287 Msa0174290:intron 35.0%
CTTGAGAGACAAATTAAGAG+AGG + chr1_4:59897346-59897365 Msa0174290:intron 35.0%
TAAAGCTAGTTAATCACCGT+TGG + chr1_4:59897506-59897525 Msa0174290:CDS 35.0%
! GCCTTTATTCTTGTTTGACA+AGG + chr1_4:59897548-59897567 Msa0174290:intron 35.0%
! TCTTGTTTGACAAGGAGTTA+TGG + chr1_4:59897556-59897575 Msa0174290:intron 35.0%
CTTGTTTGACAAGGAGTTAT+GGG + chr1_4:59897557-59897576 Msa0174290:intron 35.0%
TGTATTTAAATTGTGGCTGC+TGG + chr1_4:59897597-59897616 Msa0174290:intron 35.0%
ATTTCTTCAGCTTGAAGGAT+TGG + chr1_4:59897668-59897687 Msa0174290:intron 35.0%
TTTCTTCAGCTTGAAGGATT+GGG + chr1_4:59897669-59897688 Msa0174290:intron 35.0%
!! TGTTTTTATCACGTTGTAGC+AGG + chr1_4:59897821-59897840 Msa0174290:intron 35.0%
ATGCAATTGTTGCATTTCAC+CGG + chr1_4:59897846-59897865 Msa0174290:intron 35.0%
AAAAACACGAAACAGATCGT+CGG - chr1_4:59897913-59897932 None:intergenic 35.0%
TATCCTCTCTCGTAATCTTA+AGG + chr1_4:59898048-59898067 Msa0174290:intron 35.0%
AATCCTTAAGATTACGAGAG+AGG - chr1_4:59898054-59898073 None:intergenic 35.0%
CAAATGAATTGAGAACACCT+TGG - chr1_4:59898085-59898104 None:intergenic 35.0%
TTGTTGCTGAGAAAAAAGAC+GGG + chr1_4:59898115-59898134 Msa0174290:intron 35.0%
GGATAACATGGAAAAGCTAA+CGG - chr1_4:59898317-59898336 None:intergenic 35.0%
!!! TGGTTTTGAACTAGAGATGA+TGG + chr1_4:59898377-59898396 Msa0174290:CDS 35.0%
!! TTTTGAACTAGAGATGATGG+CGG + chr1_4:59898380-59898399 Msa0174290:CDS 35.0%
! TGTGCCAAATTTTGAACCTA+GGG - chr1_4:59898484-59898503 None:intergenic 35.0%
! ATCGTCAAAATCTCTAAGAG+AGG + chr1_4:59898518-59898537 Msa0174290:CDS 35.0%
TTGGCATTTGGAAAAACTTG+TGG - chr1_4:59898576-59898595 None:intergenic 35.0%
TCTTTACCCTTATTGGCATT+TGG - chr1_4:59898588-59898607 None:intergenic 35.0%
AAAGACTCTTCGATTACTAC+AGG + chr1_4:59898603-59898622 Msa0174290:CDS 35.0%
GCATAATATTAGCAACCTGA+AGG + chr1_4:59898659-59898678 Msa0174290:CDS 35.0%
ATCAGCATTCTTAGACTCAA+TGG - chr1_4:59898754-59898773 None:intergenic 35.0%
TTCCAGGATATTGACATTAC+TGG + chr1_4:59898792-59898811 Msa0174290:CDS 35.0%
TTCCAGTAATGTCAATATCC+TGG - chr1_4:59898797-59898816 None:intergenic 35.0%
ATACAAATTCATCTGGTCTG+CGG + chr1_4:59898817-59898836 Msa0174290:CDS 35.0%
AAATTGTCATCACGCAGATT+AGG - chr1_4:59898843-59898862 None:intergenic 35.0%
TAATCTGCGTGATGACAATT+TGG + chr1_4:59898842-59898861 Msa0174290:CDS 35.0%
! TGGAAAAGGTAAACCCTTTT+TGG - chr1_4:59898968-59898987 None:intergenic 35.0%
! AAAAAGGGTTTACCTTTTCC+AGG + chr1_4:59898967-59898986 Msa0174290:CDS 35.0%
! AAAAGGGTTTACCTTTTCCA+GGG + chr1_4:59898968-59898987 Msa0174290:CDS 35.0%
ATCAAATCTGCATGTGTTGA+AGG + chr1_4:59899068-59899087 Msa0174290:CDS 35.0%
!! AGAAACTGGTGTTATTCAAG+AGG + chr1_4:59899100-59899119 Msa0174290:CDS 35.0%
GAAAAAACCCCACTAACAAA+TGG + chr1_4:59899224-59899243 Msa0174290:CDS 35.0%
CTTATCAAATGCCAATGTGT+TGG - chr1_4:59899381-59899400 None:intergenic 35.0%
TCAAAGAATGAAGGATTTCC+TGG + chr1_4:59899599-59899618 Msa0174290:CDS 35.0%
!! GATTTCCTGGTCTTGATAAT+TGG + chr1_4:59899612-59899631 Msa0174290:CDS 35.0%
AAATCCCAATTATCAAGACC+AGG - chr1_4:59899620-59899639 None:intergenic 35.0%
! TTAGCAGTAACACCTTTTCT+GGG - chr1_4:59899722-59899741 None:intergenic 35.0%
! TTTAGCAGTAACACCTTTTC+TGG - chr1_4:59899723-59899742 None:intergenic 35.0%
AGCAAAGAAATAGCAACTTC+TGG + chr1_4:59899809-59899828 Msa0174290:CDS 35.0%
CAAATTGATGGAGCAAAAAC+CGG + chr1_4:59899874-59899893 Msa0174290:CDS 35.0%
!!! TTTTTTGGATGACGAAACTG+AGG + chr1_4:59899934-59899953 Msa0174290:CDS 35.0%
TCTACTTCACATTTGTCATC+TGG - chr1_4:59899962-59899981 None:intergenic 35.0%
TGACAAATGTGAAGTAGAGT+TGG + chr1_4:59899964-59899983 Msa0174290:CDS 35.0%
GACAAATGTGAAGTAGAGTT+GGG + chr1_4:59899965-59899984 Msa0174290:CDS 35.0%
AGATGAACCAATTCTTCATC+CGG - chr1_4:59899998-59900017 None:intergenic 35.0%
TGCAAAGAAGTTAGCGAAAT+CGG + chr1_4:59900222-59900241 Msa0174290:CDS 35.0%
AAATCGGAAAAGGCAGTATT+TGG + chr1_4:59900238-59900257 Msa0174290:CDS 35.0%
AATCGGAAAAGGCAGTATTT+GGG + chr1_4:59900239-59900258 Msa0174290:CDS 35.0%
GAGTTCTCACTTATATCAGA+AGG - chr1_4:59900334-59900353 None:intergenic 35.0%
! GCTCGAGAATTTTATTGAAG+AGG + chr1_4:59900372-59900391 Msa0174290:CDS 35.0%
AAACCATGCTCTTCATCATT+TGG - chr1_4:59900412-59900431 None:intergenic 35.0%
TTAGAGGAGAGAAGAAATGT+TGG + chr1_4:59900430-59900449 Msa0174290:CDS 35.0%
TAGAGGAGAGAAGAAATGTT+GGG + chr1_4:59900431-59900450 Msa0174290:CDS 35.0%
TCCTTAGACTTGATATTTGC+TGG - chr1_4:59900484-59900503 None:intergenic 35.0%
AATTTCTCTGTCCTCCTTAT+AGG - chr1_4:59900694-59900713 None:intergenic 35.0%
TTGAAAGAAAGAACAGGTCA+TGG + chr1_4:59900985-59901004 Msa0174290:CDS 35.0%
GAAGAAAAACATACCAAAGG+TGG - chr1_4:59901057-59901076 None:intergenic 35.0%
! ATCATATTTTCTCCTTCGTC+CGG + chr1_4:59901114-59901133 Msa0174290:intron 35.0%
GTATCAAGAAAGCGAGTATA+AGG - chr1_4:59901420-59901439 None:intergenic 35.0%
TATACTCGCTTTCTTGATAC+TGG + chr1_4:59901420-59901439 Msa0174290:CDS 35.0%
ATACTCGCTTTCTTGATACT+GGG + chr1_4:59901421-59901440 Msa0174290:CDS 35.0%
TAAGGCAGAAGAGATTATTG+AGG + chr1_4:59901638-59901657 Msa0174290:CDS 35.0%
!! TTTTGAGCATGTTTGGGTTT+GGG - chr1_4:59901874-59901893 None:intergenic 35.0%
!! TTTTTGAGCATGTTTGGGTT+TGG - chr1_4:59901875-59901894 None:intergenic 35.0%
!!! GGGTTTTTTTGAGCATGTTT+GGG - chr1_4:59901880-59901899 None:intergenic 35.0%
!!! TGGGTTTTTTTGAGCATGTT+TGG - chr1_4:59901881-59901900 None:intergenic 35.0%
! GCACCCTTTTTCCTTTTATT+GGG - chr1_4:59901900-59901919 None:intergenic 35.0%
! TGCACCCTTTTTCCTTTTAT+TGG - chr1_4:59901901-59901920 None:intergenic 35.0%
TTCTGCCTTACTTTGATGTT+TGG - chr1_4:59902113-59902132 None:intergenic 35.0%
CGATCATCTCACAGAAAACA+AGG + chr1_4:59894200-59894219 Msa0174290:CDS 40.0%
!! CGATTCAAGCTTGTTAATGG+CGG + chr1_4:59894322-59894341 Msa0174290:CDS 40.0%
!! GTTGAACATAGTGCTGATGT+TGG + chr1_4:59894555-59894574 Msa0174290:CDS 40.0%
!!! TGACACTCATTTTGAAACGG+AGG + chr1_4:59895020-59895039 Msa0174290:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_4:59895021-59895040 Msa0174290:intron 40.0%
AGTTGCGTGTATATGTGTCT+TGG + chr1_4:59895085-59895104 Msa0174290:intron 40.0%
CAAAGTCGGAACAATCCAAT+TGG - chr1_4:59895262-59895281 None:intergenic 40.0%
!!! TTATTTTGGAGGGGAATGGA+AGG + chr1_4:59895629-59895648 Msa0174290:intron 40.0%
!! TATTTTGGAGGGGAATGGAA+GGG + chr1_4:59895630-59895649 Msa0174290:intron 40.0%
!!! AGGGAGGGTTTTGGAAAAAA+AGG + chr1_4:59895649-59895668 Msa0174290:intron 40.0%
ACAAAACCCACATCATTTGG+GGG + chr1_4:59895747-59895766 Msa0174290:intron 40.0%
TATTAGAGGAGGACTTTGGA+GGG + chr1_4:59895783-59895802 Msa0174290:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr1_4:59895966-59895985 None:intergenic 40.0%
GCTAACTCACTTAGATGGAT+AGG + chr1_4:59896035-59896054 Msa0174290:intron 40.0%
CTCACTTAGATGGATAGGTT+TGG + chr1_4:59896040-59896059 Msa0174290:intron 40.0%
! CACAGAAGTATAGTAGCACT+GGG - chr1_4:59896079-59896098 None:intergenic 40.0%
ACGTGTGTACTTGACTTTGT+AGG + chr1_4:59896280-59896299 Msa0174290:intron 40.0%
TCTGTACATGACCTGGTAAA+TGG - chr1_4:59896346-59896365 None:intergenic 40.0%
GTACAGACCGCTTAAAGATT+TGG + chr1_4:59896359-59896378 Msa0174290:CDS 40.0%
AGACCGCTTAAAGATTTGGA+TGG + chr1_4:59896363-59896382 Msa0174290:CDS 40.0%
AATTCCGGGTGCAAAAGATT+TGG + chr1_4:59896386-59896405 Msa0174290:CDS 40.0%
! ACAACCAAATCTTTTGCACC+CGG - chr1_4:59896393-59896412 None:intergenic 40.0%
TATAGGGACTATCAGAACAG+AGG + chr1_4:59896901-59896920 Msa0174290:intron 40.0%
! GGGTATTTTCTTAGCCAGTA+AGG + chr1_4:59896987-59897006 Msa0174290:intron 40.0%
TGGCGAATAAATCACCTTAC+TGG - chr1_4:59897004-59897023 None:intergenic 40.0%
AAACTGAAACTTCCAGTGTG+AGG - chr1_4:59897080-59897099 None:intergenic 40.0%
CCCTTCAAAGAAGATCTGAA+AGG - chr1_4:59897271-59897290 None:intergenic 40.0%
TAGGCTTGAGACTAATGTTG+AGG - chr1_4:59897301-59897320 None:intergenic 40.0%
CTTTATTGTGGCCAATCTCT+TGG - chr1_4:59897491-59897510 None:intergenic 40.0%
TTAAGGATTCCAGCTTTCCA+AGG + chr1_4:59898065-59898084 Msa0174290:intron 40.0%
TGTTGCTGAGAAAAAAGACG+GGG + chr1_4:59898116-59898135 Msa0174290:intron 40.0%
ACTATAAGCAAAAGTCCCCT+AGG + chr1_4:59898465-59898484 Msa0174290:CDS 40.0%
AGTCCCCTAGGTTCAAAATT+TGG + chr1_4:59898477-59898496 Msa0174290:CDS 40.0%
! GTGCCAAATTTTGAACCTAG+GGG - chr1_4:59898483-59898502 None:intergenic 40.0%
! CTGTGCCAAATTTTGAACCT+AGG - chr1_4:59898485-59898504 None:intergenic 40.0%
! GTCAAAATCTCTAAGAGAGG+AGG + chr1_4:59898521-59898540 Msa0174290:CDS 40.0%
AAAGCCATCCCAAATTCTAC+TGG + chr1_4:59898549-59898568 Msa0174290:CDS 40.0%
CTTGTGGACCAGTAGAATTT+GGG - chr1_4:59898560-59898579 None:intergenic 40.0%
ACTTGTGGACCAGTAGAATT+TGG - chr1_4:59898561-59898580 None:intergenic 40.0%
CGAAGAGTCTTTACCCTTAT+TGG - chr1_4:59898595-59898614 None:intergenic 40.0%
GTAGAATGCAAAGAAACGTC+AGG - chr1_4:59898699-59898718 None:intergenic 40.0%
!! TCAACTTCTACAAGTGCTGA+TGG + chr1_4:59898891-59898910 Msa0174290:CDS 40.0%
GCACATTCAGATGAAAAGCT+CGG + chr1_4:59898918-59898937 Msa0174290:CDS 40.0%
TTGATCTACTACCCTGGAAA+AGG - chr1_4:59898982-59899001 None:intergenic 40.0%
TTCACATTGATCTACTACCC+TGG - chr1_4:59898988-59899007 None:intergenic 40.0%
GATCAATGTGAAGACAGAGA+AGG + chr1_4:59898996-59899015 Msa0174290:CDS 40.0%
! GCTTCATTTGTCCTCTTTTG+AGG - chr1_4:59899146-59899165 None:intergenic 40.0%
ATCAAATGCCAATGTGTTGG+AGG - chr1_4:59899378-59899397 None:intergenic 40.0%
GCATTTGATAAGCCTATCTC+AGG + chr1_4:59899389-59899408 Msa0174290:CDS 40.0%
GATTCTGCATTTCCTGAGAT+AGG - chr1_4:59899404-59899423 None:intergenic 40.0%
TTTCCAAAAACCGTTGCATC+AGG - chr1_4:59899506-59899525 None:intergenic 40.0%
!! TGATGCAACGGTTTTTGGAA+AGG + chr1_4:59899505-59899524 Msa0174290:CDS 40.0%
!! GATGCAACGGTTTTTGGAAA+GGG + chr1_4:59899506-59899525 Msa0174290:CDS 40.0%
!! ATGCAACGGTTTTTGGAAAG+GGG + chr1_4:59899507-59899526 Msa0174290:CDS 40.0%
TGATGAACACTCAAGATGTG+TGG - chr1_4:59899567-59899586 None:intergenic 40.0%
! TCTAGAACCCAAAGTTCTCT+TGG - chr1_4:59899699-59899718 None:intergenic 40.0%
AAAACTACTCAGCGAGATGA+AGG + chr1_4:59899767-59899786 Msa0174290:CDS 40.0%
!! TGCTATTTCTTTGCTTCTGC+TGG - chr1_4:59899804-59899823 None:intergenic 40.0%
AATAGCAACTTCTGGTGTGA+AGG + chr1_4:59899817-59899836 Msa0174290:CDS 40.0%
TCTTCTGCATACTCACTAAC+CGG - chr1_4:59899896-59899915 None:intergenic 40.0%
!!! TGGTGGCAGAACTGATTTTT+TGG + chr1_4:59899919-59899938 Msa0174290:CDS 40.0%
ATGTGAAGTAGAGTTGGGAA+TGG + chr1_4:59899970-59899989 Msa0174290:CDS 40.0%
TTCTAACTTCTCTTCTGCTG+AGG - chr1_4:59900038-59900057 None:intergenic 40.0%
!!! GTCTTCTTGGTTTTACTTGC+AGG - chr1_4:59900196-59900215 None:intergenic 40.0%
GAAGTTAGCGAAATCGGAAA+AGG + chr1_4:59900228-59900247 Msa0174290:CDS 40.0%
ATCGGAAAAGGCAGTATTTG+GGG + chr1_4:59900240-59900259 Msa0174290:CDS 40.0%
TCCAAATGAGACAAGAGATG+AGG + chr1_4:59900270-59900289 Msa0174290:CDS 40.0%
CAGACAGTGACATTTCTTTC+AGG - chr1_4:59900309-59900328 None:intergenic 40.0%
AGACCAAATGATGAAGAGCA+TGG + chr1_4:59900406-59900425 Msa0174290:CDS 40.0%
! TGATGAAGAGCATGGTTTAG+AGG + chr1_4:59900414-59900433 Msa0174290:CDS 40.0%
GCCAGCAAATATCAAGTCTA+AGG + chr1_4:59900480-59900499 Msa0174290:CDS 40.0%
TGATCAAGCGTTTGAAAGGA+AGG + chr1_4:59900611-59900630 Msa0174290:CDS 40.0%
GATCAAGCGTTTGAAAGGAA+GGG + chr1_4:59900612-59900631 Msa0174290:CDS 40.0%
ATGACCACTGATGAGAATCA+CGG - chr1_4:59900642-59900661 None:intergenic 40.0%
TTCTCATCAGTGGTCATATC+AGG + chr1_4:59900645-59900664 Msa0174290:CDS 40.0%
TCATAGCTCCAGATCCTATA+AGG + chr1_4:59900677-59900696 Msa0174290:CDS 40.0%
TCAGGAAGGTAAGGAAAAGT+AGG + chr1_4:59900730-59900749 Msa0174290:intron 40.0%
ATTGTCTAACTAATCTCGGG+TGG + chr1_4:59900816-59900835 Msa0174290:intron 40.0%
!! CCATTTTTGTGCCACTCATA+AGG - chr1_4:59900913-59900932 None:intergenic 40.0%
CCTTATGAGTGGCACAAAAA+TGG + chr1_4:59900910-59900929 Msa0174290:CDS 40.0%
!! TGATTGTTTTGCTCCACCTT+TGG + chr1_4:59901041-59901060 Msa0174290:CDS 40.0%
! TCATATTTTCTCCTTCGTCC+GGG + chr1_4:59901115-59901134 Msa0174290:intron 40.0%
! TTTTCGCCTTCATAAGGGAA+TGG + chr1_4:59901228-59901247 Msa0174290:intron 40.0%
ATAAGGGAATGGATGGGTAT+AGG + chr1_4:59901239-59901258 Msa0174290:intron 40.0%
TCAAGAAAGCGAGTATAAGG+AGG - chr1_4:59901417-59901436 None:intergenic 40.0%
TACTCGCTTTCTTGATACTG+GGG + chr1_4:59901422-59901441 Msa0174290:CDS 40.0%
TGAGATACCTTGTGTTGTAG+CGG + chr1_4:59901512-59901531 Msa0174290:CDS 40.0%
! GATATAGCTTGCCAAGTATG+TGG + chr1_4:59901702-59901721 Msa0174290:CDS 40.0%
! CTGATTTGTGGTGATGAAAG+TGG + chr1_4:59901750-59901769 Msa0174290:CDS 40.0%
!!! TTTGGGTGCTACTGCATTTT+GGG - chr1_4:59901857-59901876 None:intergenic 40.0%
AGTGAAACACACAATGAGCA+GGG - chr1_4:59902001-59902020 None:intergenic 40.0%
TAAGGCAGAAGAGATTATCG+AGG + chr1_4:59902123-59902142 Msa0174290:CDS 40.0%
!! GGAGATTTGATGCTGATTTG+TGG + chr1_4:59902214-59902233 Msa0174290:CDS 40.0%
! CTGATTTGTGGTGATGAAAC+TGG + chr1_4:59902226-59902245 Msa0174290:CDS 40.0%
AGGATTGCAGCAATCGATAT+GGG - chr1_4:59902275-59902294 None:intergenic 40.0%
GGTGTTCATTTCGCTCTCTT+TGG + chr1_4:59894174-59894193 Msa0174290:CDS 45.0%
!! TTCAAGCTTGTTAATGGCGG+TGG + chr1_4:59894325-59894344 Msa0174290:CDS 45.0%
GTTCTTATCACAGGACGATC+CGG + chr1_4:59894482-59894501 Msa0174290:intron 45.0%
GAGAGAGGATGGAAAGATGT+TGG + chr1_4:59894518-59894537 Msa0174290:CDS 45.0%
!! AGATGTTGGTGACTGCATTG+TGG + chr1_4:59894532-59894551 Msa0174290:CDS 45.0%
!! GATGTTGGTGACTGCATTGT+GGG + chr1_4:59894533-59894552 Msa0174290:CDS 45.0%
AATGCCTGTTGATGCTACCT+CGG + chr1_4:59894578-59894597 Msa0174290:CDS 45.0%
!! GTAGGCCTCCCAATTTTGAT+TGG + chr1_4:59895313-59895332 Msa0174290:intron 45.0%
CTCAAGGTTCTCATCTGCAA+TGG - chr1_4:59895441-59895460 None:intergenic 45.0%
TGCAGATGAGAACCTTGAGT+TGG + chr1_4:59895442-59895461 Msa0174290:intron 45.0%
TGTTTGATAGGGGAGAGCTT+TGG + chr1_4:59895701-59895720 Msa0174290:intron 45.0%
GTTTGATAGGGGAGAGCTTT+GGG + chr1_4:59895702-59895721 Msa0174290:intron 45.0%
TTTGATAGGGGAGAGCTTTG+GGG + chr1_4:59895703-59895722 Msa0174290:intron 45.0%
TGAGTTCCCCCAAATGATGT+GGG - chr1_4:59895756-59895775 None:intergenic 45.0%
TTGAGTTCCCCCAAATGATG+TGG - chr1_4:59895757-59895776 None:intergenic 45.0%
GTATTAGAGGAGGACTTTGG+AGG + chr1_4:59895782-59895801 Msa0174290:intron 45.0%
TCAGGGGGCTTGGAAATATA+GGG - chr1_4:59895932-59895951 None:intergenic 45.0%
TTCAGGGGGCTTGGAAATAT+AGG - chr1_4:59895933-59895952 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr1_4:59895961-59895980 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr1_4:59895962-59895981 None:intergenic 45.0%
! GCACAGAAGTATAGTAGCAC+TGG - chr1_4:59896080-59896099 None:intergenic 45.0%
! GATTTGGTTGTCTGCTTGAC+TGG + chr1_4:59896402-59896421 Msa0174290:CDS 45.0%
TTCCCTCTTCAGACAATGGT+TGG + chr1_4:59896542-59896561 Msa0174290:intron 45.0%
TAGAAAACTGTGCACCCATC+AGG - chr1_4:59896568-59896587 None:intergenic 45.0%
! TGCACAGTTTTCTAAGCCGT+TGG + chr1_4:59896574-59896593 Msa0174290:CDS 45.0%
! GTAACCTTGTTTGCGACCAA+CGG - chr1_4:59896593-59896612 None:intergenic 45.0%
AACAGAGGTGACAAAACGTG+AGG + chr1_4:59896916-59896935 Msa0174290:intron 45.0%
ACAGAGGTGACAAAACGTGA+GGG + chr1_4:59896917-59896936 Msa0174290:intron 45.0%
! CAGATCTTCTTTGAAGGGAG+AGG + chr1_4:59897273-59897292 Msa0174290:intron 45.0%
CATACCAATCTTCCAGCCAA+CGG - chr1_4:59897525-59897544 None:intergenic 45.0%
GATCGTCGGTCTCAAAATAC+AGG - chr1_4:59897899-59897918 None:intergenic 45.0%
TTGAGAACACCTTGGAAAGC+TGG - chr1_4:59898077-59898096 None:intergenic 45.0%
GTTGCTGAGAAAAAAGACGG+GGG + chr1_4:59898117-59898136 Msa0174290:intron 45.0%
! TAAGGATTCTGAGGATGAGG+CGG + chr1_4:59898410-59898429 Msa0174290:CDS 45.0%
TGGACCAGTAGAATTTGGGA+TGG - chr1_4:59898556-59898575 None:intergenic 45.0%
ATGTCAATATCCTGGAAGCC+AGG - chr1_4:59898789-59898808 None:intergenic 45.0%
!! TCGGTGCTACGAGTTATTCT+AGG + chr1_4:59898937-59898956 Msa0174290:CDS 45.0%
CAAGGTAGAAAAGGCAAGTG+AGG + chr1_4:59899043-59899062 Msa0174290:CDS 45.0%
TCTGCATGTGTTGAAGGTTC+TGG + chr1_4:59899074-59899093 Msa0174290:CDS 45.0%
CTGCATGTGTTGAAGGTTCT+GGG + chr1_4:59899075-59899094 Msa0174290:CDS 45.0%
!! GAAGGTTCTGGGAAAGAAAC+TGG + chr1_4:59899086-59899105 Msa0174290:CDS 45.0%
GAAAGAAAGCCATCAGACAC+AGG - chr1_4:59899293-59899312 None:intergenic 45.0%
TGCGGATTTAGAAACCAAGC+AGG - chr1_4:59899348-59899367 None:intergenic 45.0%
CATCTTGAGTGTTCATCACC+AGG + chr1_4:59899569-59899588 Msa0174290:CDS 45.0%
TTGCGCGGTGACTTTCTAAT+CGG - chr1_4:59899665-59899684 None:intergenic 45.0%
TCAGCTGCCAAGAGAACTTT+GGG + chr1_4:59899689-59899708 Msa0174290:CDS 45.0%
!! TTGGGTTCTAGACCCAGAAA+AGG + chr1_4:59899707-59899726 Msa0174290:CDS 45.0%
AGTGAGTATGCAGAAGATGC+TGG + chr1_4:59899899-59899918 Msa0174290:CDS 45.0%
AATGGCTCCGGATGAAGAAT+TGG + chr1_4:59899988-59900007 Msa0174290:CDS 45.0%
GAAGTTAGAAGCAGTTGACC+AGG + chr1_4:59900048-59900067 Msa0174290:CDS 45.0%
GAGGTTGAGTCTAACTCTGA+AGG - chr1_4:59900139-59900158 None:intergenic 45.0%
GCCTCATCTCTTGTCTCATT+TGG - chr1_4:59900274-59900293 None:intergenic 45.0%
AATGAGACAAGAGATGAGGC+AGG + chr1_4:59900274-59900293 Msa0174290:CDS 45.0%
ATGAGACAAGAGATGAGGCA+GGG + chr1_4:59900275-59900294 Msa0174290:CDS 45.0%
GCTGAAACTCCTTTCTCTGT+AGG - chr1_4:59900588-59900607 None:intergenic 45.0%
ACAGAGAAAGGAGTTTCAGC+AGG + chr1_4:59900588-59900607 Msa0174290:CDS 45.0%
CAGGTGATCAAGCGTTTGAA+AGG + chr1_4:59900607-59900626 Msa0174290:CDS 45.0%
TTTGCCGTGATTCTCATCAG+TGG + chr1_4:59900635-59900654 Msa0174290:CDS 45.0%
TAGCTCCAGATCCTATAAGG+AGG + chr1_4:59900680-59900699 Msa0174290:CDS 45.0%
TCTGTCCTCCTTATAGGATC+TGG - chr1_4:59900688-59900707 None:intergenic 45.0%
!!! TTTTTTGCCGCTACTGCATC+AGG + chr1_4:59900712-59900731 Msa0174290:CDS 45.0%
TTACCTTCCTGATGCAGTAG+CGG - chr1_4:59900722-59900741 None:intergenic 45.0%
TTTCTTAAGTGCCAGTAGCC+AGG + chr1_4:59900864-59900883 Msa0174290:CDS 45.0%
! TAATTTTCCTGCCTGGCTAC+TGG - chr1_4:59900878-59900897 None:intergenic 45.0%
! CTGGCAATAATTTTCCTGCC+TGG - chr1_4:59900885-59900904 None:intergenic 45.0%
GGCAGGAAAATTATTGCCAG+AGG + chr1_4:59900885-59900904 Msa0174290:CDS 45.0%
AAAAATGGTCTCAGCGAGGA+CGG + chr1_4:59900925-59900944 Msa0174290:CDS 45.0%
TCTTGGAGCCTCCATATTGA+TGG - chr1_4:59900953-59900972 None:intergenic 45.0%
ATATGGAGGCTCCAAGAAAG+TGG + chr1_4:59900956-59900975 Msa0174290:CDS 45.0%
CGGCTGTTGAAAGAAAGAAC+AGG + chr1_4:59900979-59900998 Msa0174290:CDS 45.0%
AACAATGCGCATCCCATAGA+AGG - chr1_4:59901013-59901032 None:intergenic 45.0%
GGGATGCGCATTGTTGTATA+TGG + chr1_4:59901018-59901037 Msa0174290:CDS 45.0%
GCCTTCATAAGGGAATGGAT+GGG + chr1_4:59901233-59901252 Msa0174290:intron 45.0%
ACCCATCCATTCCCTTATGA+AGG - chr1_4:59901237-59901256 None:intergenic 45.0%
ACAGGATACTCTTAAGCGTG+CGG + chr1_4:59901356-59901375 Msa0174290:intron 45.0%
AAGTAGTCCGCTACAACACA+AGG - chr1_4:59901522-59901541 None:intergenic 45.0%
!! TTGTGTTGTAGCGGACTACT+TGG + chr1_4:59901521-59901540 Msa0174290:CDS 45.0%
GTACAGTACGTGTCTCTCAA+GGG - chr1_4:59901574-59901593 None:intergenic 45.0%
CTTGAGAGACACGTACTGTA+CGG + chr1_4:59901573-59901592 Msa0174290:CDS 45.0%
GGCAGAAGAGATTATTGAGG+AGG + chr1_4:59901641-59901660 Msa0174290:CDS 45.0%
TTTCCAGGGATCCACATACT+TGG - chr1_4:59901716-59901735 None:intergenic 45.0%
CATGACATCTCCTCTTTCCA+GGG - chr1_4:59901730-59901749 None:intergenic 45.0%
!! GGAGATGTCATGCTGATTTG+TGG + chr1_4:59901738-59901757 Msa0174290:CDS 45.0%
!!! GTTTGGGTGCTACTGCATTT+TGG - chr1_4:59901858-59901877 None:intergenic 45.0%
ACACAATGAGCAGGGACTAA+CGG - chr1_4:59901993-59902012 None:intergenic 45.0%
GAGTGAAACACACAATGAGC+AGG - chr1_4:59902002-59902021 None:intergenic 45.0%
!!! GGCGACCCTTAATGGATTTT+AGG + chr1_4:59902080-59902099 Msa0174290:intron 45.0%
TCATCATTGCAACCCTCATG+AGG - chr1_4:59902157-59902176 None:intergenic 45.0%
! GATGTAGCTTGCCAAGTATG+TGG + chr1_4:59902178-59902197 Msa0174290:CDS 45.0%
! GGTGATGAAACTGGTTCCAT+TGG + chr1_4:59902235-59902254 Msa0174290:CDS 45.0%
GAGGATTGCAGCAATCGATA+TGG - chr1_4:59902276-59902295 None:intergenic 45.0%
GGGTGCATTGTCTTCATCAA+AGG + chr1_4:59902384-59902403 Msa0174290:CDS 45.0%
!! AAAATTAATAAAAAAAAAAG+AGG - chr1_4:59894231-59894250 None:intergenic 5.0%
! CACTCTTCGCGAGTCTTTTG+CGG + chr1_4:59894153-59894172 Msa0174290:CDS 50.0%
!! TAATGGCGGTGGAGTTGATG+CGG + chr1_4:59894336-59894355 Msa0174290:CDS 50.0%
CAAACCGAGGTAGCATCAAC+AGG - chr1_4:59894585-59894604 None:intergenic 50.0%
CAGGGGGCTTGGAAATATAG+GGG - chr1_4:59895931-59895950 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr1_4:59895963-59895982 None:intergenic 50.0%
TAAGCGGTCTGTACATGACC+TGG - chr1_4:59896353-59896372 None:intergenic 50.0%
CCATAATGTCATCCCGATCC+TGG - chr1_4:59896437-59896456 None:intergenic 50.0%
CCAGGATCGGGATGACATTA+TGG + chr1_4:59896434-59896453 Msa0174290:CDS 50.0%
GGCCAACCATTGTCTGAAGA+GGG - chr1_4:59896547-59896566 None:intergenic 50.0%
AGGCCAACCATTGTCTGAAG+AGG - chr1_4:59896548-59896567 None:intergenic 50.0%
!! TCAGACAATGGTTGGCCTGA+TGG + chr1_4:59896550-59896569 Msa0174290:intron 50.0%
!! CAGACAATGGTTGGCCTGAT+GGG + chr1_4:59896551-59896570 Msa0174290:intron 50.0%
TAAGCCGTTGGTCGCAAACA+AGG + chr1_4:59896586-59896605 Msa0174290:CDS 50.0%
GAAACTTCCAGTGTGAGGAG+AGG - chr1_4:59897075-59897094 None:intergenic 50.0%
GTACGAGCTTGCCAAGAGAT+TGG + chr1_4:59897477-59897496 Msa0174290:CDS 50.0%
GCTAGTTAATCACCGTTGGC+TGG + chr1_4:59897510-59897529 Msa0174290:CDS 50.0%
! ATCACCGTTGGCTGGAAGAT+TGG + chr1_4:59897518-59897537 Msa0174290:CDS 50.0%
!! ACTAGAGATGATGGCGGAAG+AGG + chr1_4:59898386-59898405 Msa0174290:CDS 50.0%
GGAAGAGGCTAAGGATTCTG+AGG + chr1_4:59898401-59898420 Msa0174290:CDS 50.0%
! GGCTAAGGATTCTGAGGATG+AGG + chr1_4:59898407-59898426 Msa0174290:CDS 50.0%
ATTCCAAGCTGGGGCAATCA+GGG + chr1_4:59898436-59898455 Msa0174290:CDS 50.0%
TTTGGCACAGCTGTGACTCA+TGG + chr1_4:59898495-59898514 Msa0174290:CDS 50.0%
CAACCTGAAGGTAAGCTGTC+AGG + chr1_4:59898671-59898690 Msa0174290:CDS 50.0%
GAACCTGACAGCTTACCTTC+AGG - chr1_4:59898677-59898696 None:intergenic 50.0%
!!! GCTGATTTTCCAAAGGCACC+TGG + chr1_4:59898768-59898787 Msa0174290:CDS 50.0%
!! AGGATCGAAAGTGCCATCTG+TGG + chr1_4:59899256-59899275 Msa0174290:CDS 50.0%
AGAAAGCCATCAGACACAGG+TGG - chr1_4:59899290-59899309 None:intergenic 50.0%
AGCTTCTGCCTCCAACACAT+TGG + chr1_4:59899367-59899386 Msa0174290:CDS 50.0%
TAGTGGTGAGCCTGATGCAA+CGG + chr1_4:59899493-59899512 Msa0174290:CDS 50.0%
! GAGCCTGATGCAACGGTTTT+TGG + chr1_4:59899500-59899519 Msa0174290:CDS 50.0%
!! ACGGTTTTTGGAAAGGGGCA+AGG + chr1_4:59899512-59899531 Msa0174290:CDS 50.0%
GTCAGCTGCCAAGAGAACTT+TGG + chr1_4:59899688-59899707 Msa0174290:CDS 50.0%
GAGTATGCAGAAGATGCTGG+TGG + chr1_4:59899902-59899921 Msa0174290:CDS 50.0%
AGTAGAGTTGGGAATGGCTC+CGG + chr1_4:59899976-59899995 Msa0174290:CDS 50.0%
CTTTGCAGCTGTGGTCTTCT+TGG - chr1_4:59900209-59900228 None:intergenic 50.0%
CGCTAACTTCTTTGCAGCTG+TGG - chr1_4:59900218-59900237 None:intergenic 50.0%
ACTCCTTTCTCTGTAGGCGA+TGG - chr1_4:59900582-59900601 None:intergenic 50.0%
GCTACTGCATCAGGAAGGTA+AGG + chr1_4:59900721-59900740 Msa0174290:intron 50.0%
ACTAATCTCGGGTGGAATGC+AGG + chr1_4:59900824-59900843 Msa0174290:intron 50.0%
GCACAAAAATGGTCTCAGCG+AGG + chr1_4:59900921-59900940 Msa0174290:CDS 50.0%
! TTCAACAGCCGCCACTTTCT+TGG - chr1_4:59900970-59900989 None:intergenic 50.0%
ACAGGTCATGGTGCCTTCTA+TGG + chr1_4:59900997-59901016 Msa0174290:CDS 50.0%
CAGGTCATGGTGCCTTCTAT+GGG + chr1_4:59900998-59901017 Msa0174290:CDS 50.0%
GCTAAGGGAAAAGGAGTTGG+AGG - chr1_4:59901154-59901173 None:intergenic 50.0%
CGAGCTAAGGGAAAAGGAGT+TGG - chr1_4:59901157-59901176 None:intergenic 50.0%
! CTGGTTCGAGCTAAGGGAAA+AGG - chr1_4:59901163-59901182 None:intergenic 50.0%
CGCCTTCATAAGGGAATGGA+TGG + chr1_4:59901232-59901251 Msa0174290:intron 50.0%
GACTATGCCATAGTTAGCCC+TGG + chr1_4:59901447-59901466 Msa0174290:CDS 50.0%
!! CATGCCACGTGTCGATTTGT+GGG + chr1_4:59901470-59901489 Msa0174290:CDS 50.0%
CGTACAGTACGTGTCTCTCA+AGG - chr1_4:59901575-59901594 None:intergenic 50.0%
ACTGTACGGCACTCATGCTT+TGG + chr1_4:59901587-59901606 Msa0174290:CDS 50.0%
GCACTCATGCTTTGGCAGAT+AGG + chr1_4:59901595-59901614 Msa0174290:CDS 50.0%
GGAGGTTATTCCTCCTCATG+AGG + chr1_4:59901659-59901678 Msa0174290:CDS 50.0%
TTGCCAAGTATGTGGATCCC+TGG + chr1_4:59901710-59901729 Msa0174290:CDS 50.0%
GTATGTGGATCCCTGGAAAG+AGG + chr1_4:59901717-59901736 Msa0174290:CDS 50.0%
GCATGACATCTCCTCTTTCC+AGG - chr1_4:59901731-59901750 None:intergenic 50.0%
GGTGATGAAAGTGGTTCCGT+TGG + chr1_4:59901759-59901778 Msa0174290:CDS 50.0%
GGGTGCATTGTCTTCATCCA+AGG + chr1_4:59901914-59901933 Msa0174290:CDS 50.0%
CACATTTGGGCGACCCTTAA+TGG + chr1_4:59902072-59902091 Msa0174290:intron 50.0%
GGCAGAAGAGATTATCGAGG+AGG + chr1_4:59902126-59902145 Msa0174290:CDS 50.0%
GAGGAGGTCATTCCTCATGA+GGG + chr1_4:59902142-59902161 Msa0174290:CDS 50.0%
CTTGCCAAGTATGTGGATCG+CGG + chr1_4:59902185-59902204 Msa0174290:CDS 50.0%
TTGCCAAGTATGTGGATCGC+GGG + chr1_4:59902186-59902205 Msa0174290:CDS 50.0%
TTTCCCGCGATCCACATACT+TGG - chr1_4:59902192-59902211 None:intergenic 50.0%
! GAAACTGGTTCCATTGGCTG+TGG + chr1_4:59902241-59902260 Msa0174290:CDS 50.0%
TGGGCAAAACCAATCCTCCT+CGG - chr1_4:59901838-59901857 None:intergenic 50.0%
!! AATGGCGGTGGAGTTGATGC+GGG + chr1_4:59894337-59894356 Msa0174290:CDS 55.0%
GTTGATGCGGGGAAGAACAC+TGG + chr1_4:59894349-59894368 Msa0174290:CDS 55.0%
TCTCTCGCAGCAACACACAC+CGG - chr1_4:59894504-59894523 None:intergenic 55.0%
! TGTGTTGCTGCGAGAGAGGA+TGG + chr1_4:59894507-59894526 Msa0174290:CDS 55.0%
TTTGGAGGGGAATGGAAGGG+AGG + chr1_4:59895633-59895652 Msa0174290:intron 55.0%
TTGGAGGGGAATGGAAGGGA+GGG + chr1_4:59895634-59895653 Msa0174290:intron 55.0%
! GGGAATGGAAGGGAGGGTTT+TGG + chr1_4:59895640-59895659 Msa0174290:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr1_4:59895957-59895976 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr1_4:59895958-59895977 None:intergenic 55.0%
! CTTGACTGGCTATCTACGCC+AGG + chr1_4:59896416-59896435 Msa0174290:CDS 55.0%
CTGGCTATCTACGCCAGGAT+CGG + chr1_4:59896421-59896440 Msa0174290:CDS 55.0%
TGGCTATCTACGCCAGGATC+GGG + chr1_4:59896422-59896441 Msa0174290:CDS 55.0%
AGCACTACCTCTCCTCACAC+TGG + chr1_4:59897065-59897084 Msa0174290:intron 55.0%
!! GATGATGGCGGAAGAGGCTA+AGG + chr1_4:59898392-59898411 Msa0174290:CDS 55.0%
TGAGGCGGAAGATTCCAAGC+TGG + chr1_4:59898425-59898444 Msa0174290:CDS 55.0%
GAGGCGGAAGATTCCAAGCT+GGG + chr1_4:59898426-59898445 Msa0174290:CDS 55.0%
AGGCGGAAGATTCCAAGCTG+GGG + chr1_4:59898427-59898446 Msa0174290:CDS 55.0%
GATTCCAAGCTGGGGCAATC+AGG + chr1_4:59898435-59898454 Msa0174290:CDS 55.0%
TTCCAAGCTGGGGCAATCAG+GGG + chr1_4:59898437-59898456 Msa0174290:CDS 55.0%
GGTGGCTCATCAACCACAGA+TGG - chr1_4:59899272-59899291 None:intergenic 55.0%
GATGAGCCACCTGTGTCTGA+TGG + chr1_4:59899281-59899300 Msa0174290:CDS 55.0%
TGTGTTGGAGGCAGAAGCTG+CGG - chr1_4:59899366-59899385 None:intergenic 55.0%
! TTGGCAGCTGACTTCTTGCG+CGG - chr1_4:59899680-59899699 None:intergenic 55.0%
TGGCCATCGCCTACAGAGAA+AGG + chr1_4:59900576-59900595 Msa0174290:CDS 55.0%
TTGCCGCTACTGCATCAGGA+AGG + chr1_4:59900716-59900735 Msa0174290:CDS 55.0%
AATCTCGGGTGGAATGCAGG+TGG + chr1_4:59900827-59900846 Msa0174290:intron 55.0%
TTAAGTGCCAGTAGCCAGGC+AGG + chr1_4:59900868-59900887 Msa0174290:CDS 55.0%
! TGCCAGAGGAGCCTTATGAG+TGG + chr1_4:59900899-59900918 Msa0174290:CDS 55.0%
TGCCACTCATAAGGCTCCTC+TGG - chr1_4:59900904-59900923 None:intergenic 55.0%
!! CGAGGACGGTGCCATCAATA+TGG + chr1_4:59900939-59900958 Msa0174290:CDS 55.0%
!! GGACGGTGCCATCAATATGG+AGG + chr1_4:59900942-59900961 Msa0174290:CDS 55.0%
TGGAGGCTCCAAGAAAGTGG+CGG + chr1_4:59900959-59900978 Msa0174290:CDS 55.0%
CTTCGTCCGGGTTTGAACTC+CGG + chr1_4:59901127-59901146 Msa0174290:intron 55.0%
GGGAAAAGGAGTTGGAGGTC+CGG - chr1_4:59901149-59901168 None:intergenic 55.0%
!! GCTCAGCTGGTTCGAGCTAA+GGG - chr1_4:59901169-59901188 None:intergenic 55.0%
!! AGCTCAGCTGGTTCGAGCTA+AGG - chr1_4:59901170-59901189 None:intergenic 55.0%
CTTAAGCGTGCGGTCAAAGC+TGG + chr1_4:59901366-59901385 Msa0174290:CDS 55.0%
TGGCATGCCAGGGCTAACTA+TGG - chr1_4:59901457-59901476 None:intergenic 55.0%
AATCGACACGTGGCATGCCA+GGG - chr1_4:59901467-59901486 None:intergenic 55.0%
AAATCGACACGTGGCATGCC+AGG - chr1_4:59901468-59901487 None:intergenic 55.0%
!! GCATGCCACGTGTCGATTTG+TGG + chr1_4:59901469-59901488 Msa0174290:CDS 55.0%
TGGACCCACAAATCGACACG+TGG - chr1_4:59901477-59901496 None:intergenic 55.0%
GGTTGAGTACGTCTGCAAGC+CGG + chr1_4:59901542-59901561 Msa0174290:CDS 55.0%
GTTGAGTACGTCTGCAAGCC+GGG + chr1_4:59901543-59901562 Msa0174290:CDS 55.0%
TTGAGTACGTCTGCAAGCCG+GGG + chr1_4:59901544-59901563 Msa0174290:CDS 55.0%
TGTCTCTCAAGGGAGAACCC+CGG - chr1_4:59901564-59901583 None:intergenic 55.0%
TCATCGTCGCGATCCTCATG+AGG - chr1_4:59901675-59901694 None:intergenic 55.0%
! GAAAGTGGTTCCGTTGGCTG+TGG + chr1_4:59901765-59901784 Msa0174290:CDS 55.0%
AGTACCCACTCCACAGCCAA+CGG - chr1_4:59901778-59901797 None:intergenic 55.0%
CAGCTGTTCCTGAGGAGGAT+TGG + chr1_4:59901826-59901845 Msa0174290:CDS 55.0%
GGGCAAAACCAATCCTCCTC+AGG - chr1_4:59901837-59901856 None:intergenic 55.0%
GGGACAGACTCACTTTGCCT+TGG - chr1_4:59901934-59901953 None:intergenic 55.0%
CGAGGAGGTCATTCCTCATG+AGG + chr1_4:59902141-59902160 Msa0174290:CDS 55.0%
GTATGTGGATCGCGGGAAAG+AGG + chr1_4:59902193-59902212 Msa0174290:CDS 55.0%
! TGGTTCCATTGGCTGTGGAG+TGG + chr1_4:59902246-59902265 Msa0174290:CDS 55.0%
! GGTTCCATTGGCTGTGGAGT+GGG + chr1_4:59902247-59902266 Msa0174290:CDS 55.0%
TCCTCGGGAATAGCTGTCAG+CGG - chr1_4:59902298-59902317 None:intergenic 55.0%
CAGCTATTCCCGAGGAGGAT+TGG + chr1_4:59902302-59902321 Msa0174290:CDS 55.0%
GGGCAAAACCAATCCTCCTC+GGG - chr1_4:59901837-59901856 None:intergenic 55.0%
!! ATGGCGGTGGAGTTGATGCG+GGG + chr1_4:59894338-59894357 Msa0174290:CDS 60.0%
! GGTGTGTGTTGCTGCGAGAG+AGG + chr1_4:59894503-59894522 Msa0174290:CDS 60.0%
!! GATAGGGGAGAGCTTTGGGG+AGG + chr1_4:59895706-59895725 Msa0174290:intron 60.0%
TTTGGAGGGGAGGGCTTCAG+GGG - chr1_4:59895948-59895967 None:intergenic 60.0%
GTTTGGAGGGGAGGGCTTCA+GGG - chr1_4:59895949-59895968 None:intergenic 60.0%
AGTTTGGAGGGGAGGGCTTC+AGG - chr1_4:59895950-59895969 None:intergenic 60.0%
TCCAAGCTGGGGCAATCAGG+GGG + chr1_4:59898438-59898457 Msa0174290:CDS 60.0%
!! TCCAAAGGCACCTGGCTTCC+AGG + chr1_4:59898776-59898795 Msa0174290:CDS 60.0%
TCCTGGAAGCCAGGTGCCTT+TGG - chr1_4:59898780-59898799 None:intergenic 60.0%
CGGAGTTCAAACCCGGACGA+AGG - chr1_4:59901129-59901148 None:intergenic 60.0%
GGAGGTCCGGAGTTCAAACC+CGG - chr1_4:59901136-59901155 None:intergenic 60.0%
CGTGCGGTCAAAGCTGGAGA+TGG + chr1_4:59901372-59901391 Msa0174290:CDS 60.0%
TCGTCGCGATCCTCATGAGG+AGG - chr1_4:59901672-59901691 None:intergenic 60.0%
! TGGTTCCGTTGGCTGTGGAG+TGG + chr1_4:59901770-59901789 Msa0174290:CDS 60.0%
! GGTTCCGTTGGCTGTGGAGT+GGG + chr1_4:59901771-59901790 Msa0174290:CDS 60.0%
TCCTCAGGAACAGCTGCCAG+CGG - chr1_4:59901822-59901841 None:intergenic 60.0%
GGTACCCACTCCACAGCCAA+TGG - chr1_4:59902254-59902273 None:intergenic 60.0%
TCGGGAATAGCTGTCAGCGG+AGG - chr1_4:59902295-59902314 None:intergenic 60.0%
TCCGCTGACAGCTATTCCCG+AGG + chr1_4:59902294-59902313 Msa0174290:CDS 60.0%
GCTGACAGCTATTCCCGAGG+AGG + chr1_4:59902297-59902316 Msa0174290:CDS 60.0%
TTGGAGGGGAGGGCTTCAGG+GGG - chr1_4:59895947-59895966 None:intergenic 65.0%
TCCCCCTGATTGCCCCAGCT+TGG - chr1_4:59898442-59898461 None:intergenic 65.0%
AGCTGGGGCAATCAGGGGGA+AGG + chr1_4:59898442-59898461 Msa0174290:CDS 65.0%
AGGGGGTTGGGTAGCTCAGC+TGG - chr1_4:59901182-59901201 None:intergenic 65.0%
TCAGGAACAGCTGCCAGCGG+AGG - chr1_4:59901819-59901838 None:intergenic 65.0%
TCCGCTGGCAGCTGTTCCTG+AGG + chr1_4:59901818-59901837 Msa0174290:CDS 65.0%
GCTGGCAGCTGTTCCTGAGG+AGG + chr1_4:59901821-59901840 Msa0174290:CDS 65.0%
CGACTGCTGCGATCCTCCGC+TGG + chr1_4:59901803-59901822 Msa0174290:CDS 70.0%
GGGGAGGGCTTCAGGGGGCT+TGG - chr1_4:59895942-59895961 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 59894043 59902414 59894043 ID=Msa0174290;Name=Msa0174290
chr1_4 mRNA 59894043 59902414 59894043 ID=Msa0174290-mRNA-1;Parent=Msa0174290;Name=Msa0174290-mRNA-1;_AED=0.06;_eAED=0.06;_QI=95|1|0.90|1|0.9|0.90|11|0|1350
chr1_4 exon 59894043 59894221 59894043 ID=Msa0174290-mRNA-1:exon:18799;Parent=Msa0174290-mRNA-1
chr1_4 exon 59894319 59894408 59894319 ID=Msa0174290-mRNA-1:exon:18800;Parent=Msa0174290-mRNA-1
chr1_4 exon 59894495 59894599 59894495 ID=Msa0174290-mRNA-1:exon:18801;Parent=Msa0174290-mRNA-1
chr1_4 exon 59896354 59896455 59896354 ID=Msa0174290-mRNA-1:exon:18802;Parent=Msa0174290-mRNA-1
chr1_4 exon 59896554 59896638 59896554 ID=Msa0174290-mRNA-1:exon:18803;Parent=Msa0174290-mRNA-1
chr1_4 exon 59897470 59897539 59897470 ID=Msa0174290-mRNA-1:exon:18804;Parent=Msa0174290-mRNA-1
chr1_4 exon 59897678 59897722 59897678 ID=Msa0174290-mRNA-1:exon:18805;Parent=Msa0174290-mRNA-1
chr1_4 exon 59898377 59900737 59898377 ID=Msa0174290-mRNA-1:exon:18806;Parent=Msa0174290-mRNA-1
chr1_4 exon 59900846 59901062 59900846 ID=Msa0174290-mRNA-1:exon:18807;Parent=Msa0174290-mRNA-1
chr1_4 exon 59901360 59901940 59901360 ID=Msa0174290-mRNA-1:exon:18808;Parent=Msa0174290-mRNA-1
chr1_4 exon 59902102 59902414 59902102 ID=Msa0174290-mRNA-1:exon:18809;Parent=Msa0174290-mRNA-1
chr1_4 five_prime_UTR 59894043 59894137 59894043 ID=Msa0174290-mRNA-1:five_prime_utr;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59894138 59894221 59894138 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59894319 59894408 59894319 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59894495 59894599 59894495 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59896354 59896455 59896354 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59896554 59896638 59896554 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59897470 59897539 59897470 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59897678 59897722 59897678 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59898377 59900737 59898377 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59900846 59901062 59900846 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59901360 59901940 59901360 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
chr1_4 CDS 59902102 59902414 59902102 ID=Msa0174290-mRNA-1:cds;Parent=Msa0174290-mRNA-1
Gene Sequence

>Msa0174290

ATGCTCGAAACGAGTCACTCTTCGCGAGTCTTTTGCGGTGTTCATTTCGCTCTCTTTGGTTTCGATCATCTCACAGAAAACAAGATTCGATTCAAGCTTGTTAATGGCGGTGGAGTTGATGCGGGGAAGAACACTGGAAATTGCACGCATGTTATTGTTGATAAAATTGCTTATGACGATCCGGTGTGTGTTGCTGCGAGAGAGGATGGAAAGATGTTGGTGACTGCATTGTGGGTTGAACATAGTGCTGATGTTGGAATGCCTGTTGATGCTACCTCGGTCATGTACAGACCGCTTAAAGATTTGGATGGAATTCCGGGTGCAAAAGATTTGGTTGTCTGCTTGACTGGCTATCTACGCCAGGATCGGGATGACATTATGACAATGGTTGGCCTGATGGGTGCACAGTTTTCTAAGCCGTTGGTCGCAAACAAGGTTACTCATCTAATATGCTACAAATTTGAAGGGGAGAAGTACGAGCTTGCCAAGAGATTGGCCACAATAAAGCTAGTTAATCACCGTTGGCTGGAAGATTGCTTGAAGGATTGGGTGCTTCTTCCTGAAAACAAATATAACAAGAGTGGTTTTGAACTAGAGATGATGGCGGAAGAGGCTAAGGATTCTGAGGATGAGGCGGAAGATTCCAAGCTGGGGCAATCAGGGGGAAGGACTATAAGCAAAAGTCCCCTAGGTTCAAAATTTGGCACAGCTGTGACTCATGGATCGTCAAAATCTCTAAGAGAGGAGGCATCAAAAGCCATCCCAAATTCTACTGGTCCACAAGTTTTTCCAAATGCCAATAAGGGTAAAGACTCTTCGATTACTACAGGAAATAAGAACAATTCTGATCAAGACGTAGACTTGCATAATATTAGCAACCTGAAGGTAAGCTGTCAGGTTCCTGACGTTTCTTTGCATTCTACATCATGTCAGCTACATGAATCATATGTTAGGACCATTGAGTCTAAGAATGCTGATTTTCCAAAGGCACCTGGCTTCCAGGATATTGACATTACTGGAAATACAAATTCATCTGGTCTGCGGCCTAATCTGCGTGATGACAATTTGGAGACCAAGAAGTTAAGTTACACAAGATCAACTTCTACAAGTGCTGATGGACTTGCACATTCAGATGAAAAGCTCGGTGCTACGAGTTATTCTAGGAAGAACCAAAAAGGGTTTACCTTTTCCAGGGTAGTAGATCAATGTGAAGACAGAGAAGGCAGCAATCTTGAAACCCCTTCCACCAAGGTAGAAAAGGCAAGTGAGGTAATCAAATCTGCATGTGTTGAAGGTTCTGGGAAAGAAACTGGTGTTATTCAAGAGGATTATCAAAATAATTCATTGCCTCAAAAGAGGACAAATGAAGCTGCTTCTTCTACCAAACTAAAATCAAGAAAGATCACTAGTAATGCAAAATTGTCTATTGAAAAAACCCCACTAACAAATGGTAAATCTCAAGGATCGAAAGTGCCATCTGTGGTTGATGAGCCACCTGTGTCTGATGGCTTTCTTTCTGTTGACAAAGATGGTAGAAATAACTTAAATACCTGCTTGGTTTCTAAATCCGCAGCTTCTGCCTCCAACACATTGGCATTTGATAAGCCTATCTCAGGAAATGCAGAATCTGCTCAACGTGATAATGCTTATCAGAATTCAGCACAAAAGACTGTTCAGAGCTTAATCAAGTCTAAAGATAGTGGTGAGCCTGATGCAACGGTTTTTGGAAAGGGGCAAGGTGATAACGAAGCAGAGCAACTTAATATCACCACACATCTTGAGTGTTCATCACCAGGAAAGAATTCAAAGAATGAAGGATTTCCTGGTCTTGATAATTGGGATTTAAGCAATGAAGAAAGCAATAAGCCGATTAGAAAGTCACCGCGCAAGAAGTCAGCTGCCAAGAGAACTTTGGGTTCTAGACCCAGAAAAGGTGTTACTGCTAAACTGAAAAGTTCAGTTTGCTTGAATAAAACTACTCAGCGAGATGAAGGTGTAAGTTTTTCCAGCAGAAGCAAAGAAATAGCAACTTCTGGTGTGAAGGAGCGTCACGCATCACCCCAAATCCTTGATGTTAACAAATTGATGGAGCAAAAACCGGTTAGTGAGTATGCAGAAGATGCTGGTGGCAGAACTGATTTTTTGGATGACGAAACTGAGGCTCCAGATGACAAATGTGAAGTAGAGTTGGGAATGGCTCCGGATGAAGAATTGGTTCATCTTTCAAATAAAGTAGACACCTCAGCAGAAGAGAAGTTAGAAGCAGTTGACCAGGATAAAAAATGTGAAGAAGCAATGCCTCCTAAAAAAGTCACAAATGAAACTAAAAAACAGAAATTACCTTCAGAGTTAGACTCAACCTCGAAGTTAAAAGTAAAACATCAAACGATAAAACGTCCTGCAAGTAAAACCAAGAAGACCACAGCTGCAAAGAAGTTAGCGAAATCGGAAAAGGCAGTATTTGGGGAGAAGATTCCAAATGAGACAAGAGATGAGGCAGGGATAAAAATCCTGAAAGAAATGTCACTGTCTGTACCTTCTGATATAAGTGAGAACTCAAATGCACCAAAAAATAAGCTCGAGAATTTTATTGAAGAGGAAAAGGAGAATAGACCAAATGATGAAGAGCATGGTTTAGAGGAGAGAAGAAATGTTGGGAATCGAACTACTAAATCTAGTGCTAAGCCAGCAAATATCAAGTCTAAGGAAATGAAACACGCTCCATCTATATCAGAATTTAAGGCAAGAGTAAAACCTGAAACCACATGTTTTATTTTAAGTGGCCATCGCCTACAGAGAAAGGAGTTTCAGCAGGTGATCAAGCGTTTGAAAGGAAGGGTTTGCCGTGATTCTCATCAGTGGTCATATCAGGCAACACACTTCATAGCTCCAGATCCTATAAGGAGGACAGAGAAATTTTTTGCCGCTACTGCATCAGGAAGGTGGATTCTTAAAACTGATTTCTTAAGTGCCAGTAGCCAGGCAGGAAAATTATTGCCAGAGGAGCCTTATGAGTGGCACAAAAATGGTCTCAGCGAGGACGGTGCCATCAATATGGAGGCTCCAAGAAAGTGGCGGCTGTTGAAAGAAAGAACAGGTCATGGTGCCTTCTATGGGATGCGCATTGTTGTATATGGTGATTGTTTTGCTCCACCTTTGGATACTCTTAAGCGTGCGGTCAAAGCTGGAGATGGAACAATATTAGCAACATCTCCTCCTTATACTCGCTTTCTTGATACTGGGGTCGACTATGCCATAGTTAGCCCTGGCATGCCACGTGTCGATTTGTGGGTCCAAGAGTTCTTAAAACATGAGATACCTTGTGTTGTAGCGGACTACTTGGTTGAGTACGTCTGCAAGCCGGGGTTCTCCCTTGAGAGACACGTACTGTACGGCACTCATGCTTTGGCAGATAGGTCATTTGCAAAACTTCAAAGTAAGGCAGAAGAGATTATTGAGGAGGTTATTCCTCCTCATGAGGATCGCGACGATGACAATGATGATATAGCTTGCCAAGTATGTGGATCCCTGGAAAGAGGAGATGTCATGCTGATTTGTGGTGATGAAAGTGGTTCCGTTGGCTGTGGAGTGGGTACTCATATCGACTGCTGCGATCCTCCGCTGGCAGCTGTTCCTGAGGAGGATTGGTTTTGCCCAAAATGCAGTAGCACCCAAACCCAAACATGCTCAAAAAAACCCAATAAAAGGAAAAAGGGTGCATTGTCTTCATCCAAGGCAAAGTCATTTACCAAACATCAAAGTAAGGCAGAAGAGATTATCGAGGAGGTCATTCCTCATGAGGGTTGCAATGATGACGATGTAGCTTGCCAAGTATGTGGATCGCGGGAAAGAGGAGATTTGATGCTGATTTGTGGTGATGAAACTGGTTCCATTGGCTGTGGAGTGGGTACCCATATCGATTGCTGCAATCCTCCGCTGACAGCTATTCCCGAGGAGGATTGGTTTTGCCCAAAATGCATTAGAATCCAAAAATGCTCAAAAAAAGTCAATAAAAGTAAAAAGGGTGCATTGTCTTCATCAAAGGCCAAGTGA
Protein sequence

>Msa0174290

MLETSHSSRVFCGVHFALFGFDHLTENKIRFKLVNGGGVDAGKNTGNCTHVIVDKIAYDDPVCVAAREDGKMLVTALWVEHSADVGMPVDATSVMYRPLKDLDGIPGAKDLVVCLTGYLRQDRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGEKYELAKRLATIKLVNHRWLEDCLKDWVLLPENKYNKSGFELEMMAEEAKDSEDEAEDSKLGQSGGRTISKSPLGSKFGTAVTHGSSKSLREEASKAIPNSTGPQVFPNANKGKDSSITTGNKNNSDQDVDLHNISNLKVSCQVPDVSLHSTSCQLHESYVRTIESKNADFPKAPGFQDIDITGNTNSSGLRPNLRDDNLETKKLSYTRSTSTSADGLAHSDEKLGATSYSRKNQKGFTFSRVVDQCEDREGSNLETPSTKVEKASEVIKSACVEGSGKETGVIQEDYQNNSLPQKRTNEAASSTKLKSRKITSNAKLSIEKTPLTNGKSQGSKVPSVVDEPPVSDGFLSVDKDGRNNLNTCLVSKSAASASNTLAFDKPISGNAESAQRDNAYQNSAQKTVQSLIKSKDSGEPDATVFGKGQGDNEAEQLNITTHLECSSPGKNSKNEGFPGLDNWDLSNEESNKPIRKSPRKKSAAKRTLGSRPRKGVTAKLKSSVCLNKTTQRDEGVSFSSRSKEIATSGVKERHASPQILDVNKLMEQKPVSEYAEDAGGRTDFLDDETEAPDDKCEVELGMAPDEELVHLSNKVDTSAEEKLEAVDQDKKCEEAMPPKKVTNETKKQKLPSELDSTSKLKVKHQTIKRPASKTKKTTAAKKLAKSEKAVFGEKIPNETRDEAGIKILKEMSLSVPSDISENSNAPKNKLENFIEEEKENRPNDEEHGLEERRNVGNRTTKSSAKPANIKSKEMKHAPSISEFKARVKPETTCFILSGHRLQRKEFQQVIKRLKGRVCRDSHQWSYQATHFIAPDPIRRTEKFFAATASGRWILKTDFLSASSQAGKLLPEEPYEWHKNGLSEDGAINMEAPRKWRLLKERTGHGAFYGMRIVVYGDCFAPPLDTLKRAVKAGDGTILATSPPYTRFLDTGVDYAIVSPGMPRVDLWVQEFLKHEIPCVVADYLVEYVCKPGFSLERHVLYGTHALADRSFAKLQSKAEEIIEEVIPPHEDRDDDNDDIACQVCGSLERGDVMLICGDESGSVGCGVGTHIDCCDPPLAAVPEEDWFCPKCSSTQTQTCSKKPNKRKKGALSSSKAKSFTKHQSKAEEIIEEVIPHEGCNDDDVACQVCGSRERGDLMLICGDETGSIGCGVGTHIDCCNPPLTAIPEEDWFCPKCIRIQKCSKKVNKSKKGALSSSKAK*