AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0580200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580200 MtrunA17_Chr8g0384161 96.860 605 14 1 1 605 1 600 0.0 1204
Msa0580200 MtrunA17_Chr2g0321211 28.426 394 220 10 11 374 11 372 5.56e-39 153
Msa0580200 MtrunA17_Chr4g0026671 27.723 404 214 12 11 374 11 376 5.05e-36 144
Msa0580200 MtrunA17_Chr1g0185501 38.346 133 76 1 59 191 22 148 1.04e-16 81.6
Msa0580200 MtrunA17_Chr1g0185501 29.688 128 84 1 54 181 59 180 3.41e-11 64.7
Msa0580200 MtrunA17_Chr1g0185501 26.794 209 102 5 16 182 114 313 4.94e-11 64.3
Msa0580200 MtrunA17_Chr6g0448921 27.848 158 97 3 25 181 29 170 6.21e-14 75.1
Msa0580200 MtrunA17_Chr6g0448921 25.610 164 107 2 18 181 64 212 1.53e-11 67.4
Msa0580200 MtrunA17_Chr7g0253861 29.496 139 92 2 44 181 35 168 3.26e-13 71.2
Msa0580200 MtrunA17_Chr4g0067151 28.019 207 130 5 55 244 18 222 6.41e-13 70.1
Msa0580200 MtrunA17_Chr5g0405851 29.762 168 102 4 21 187 261 413 9.08e-13 70.9
Msa0580200 MtrunA17_Chr1g0172501 27.381 168 106 3 21 187 364 516 2.09e-12 70.1
Msa0580200 MtrunA17_Chr3g0093681 27.381 168 106 3 21 187 364 516 2.43e-12 69.7
Msa0580200 MtrunA17_Chr2g0281451 25.000 232 138 7 28 243 31 242 6.43e-12 68.9
Msa0580200 MtrunA17_Chr3g0136971 25.882 170 111 3 12 181 418 572 7.80e-12 68.2
Msa0580200 MtrunA17_Chr4g0053651 28.947 190 109 6 7 187 367 539 1.54e-11 67.4
Msa0580200 MtrunA17_Chr8g0352821 28.571 168 103 5 16 181 312 464 1.81e-11 67.4
Msa0580200 MtrunA17_Chr3g0095501 28.571 224 138 9 34 244 242 456 4.27e-11 65.9
Msa0580200 MtrunA17_Chr1g0176241 30.894 123 79 1 60 182 366 482 4.42e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580200 AT5G64630.2 69.634 382 114 2 1 380 1 382 0.0 583
Msa0580200 AT5G64630.1 70.479 376 109 2 1 374 1 376 0.0 577
Msa0580200 AT5G64630.3 70.915 306 87 2 77 380 18 323 3.87e-164 476
Msa0580200 AT3G44530.2 27.665 394 221 11 11 374 11 370 1.81e-35 143
Msa0580200 AT3G44530.1 27.665 394 221 11 11 374 11 370 2.41e-35 143
Msa0580200 AT1G11160.3 29.412 170 103 4 13 181 16 169 1.36e-14 77.8
Msa0580200 AT1G11160.2 29.412 170 103 4 13 181 58 211 1.56e-14 77.8
Msa0580200 AT1G11160.4 29.412 170 103 4 13 181 58 211 1.60e-14 77.8
Msa0580200 AT1G11160.1 29.412 170 103 4 13 181 58 211 1.62e-14 77.8
Msa0580200 AT2G43770.1 30.935 139 90 2 44 181 33 166 7.20e-14 73.6
Msa0580200 AT1G61210.2 29.677 155 93 3 28 181 72 211 1.10e-13 75.1
Msa0580200 AT1G61210.3 29.677 155 93 3 28 181 72 211 1.15e-13 75.1
Msa0580200 AT1G61210.1 29.677 155 93 3 28 181 72 211 1.18e-13 75.1
Msa0580200 AT5G67320.1 23.464 358 198 12 16 360 268 562 4.55e-13 72.8
Msa0580200 AT3G49660.1 29.756 205 125 6 56 244 14 215 8.93e-13 70.1
Msa0580200 AT3G49660.1 28.977 176 108 3 12 184 154 315 3.58e-11 65.1
Msa0580200 AT5G08390.1 27.215 158 98 3 25 181 29 170 2.55e-12 70.5
Msa0580200 AT5G08390.1 27.273 154 97 2 28 181 74 212 5.82e-11 66.2
Msa0580200 AT5G23430.3 25.949 158 100 3 25 181 29 170 3.13e-12 70.1
Msa0580200 AT5G23430.3 27.273 154 97 2 28 181 74 212 5.33e-11 66.2
Msa0580200 AT5G23430.2 25.949 158 100 3 25 181 29 170 3.13e-12 70.1
Msa0580200 AT5G23430.2 27.273 154 97 2 28 181 74 212 5.33e-11 66.2
Msa0580200 AT5G23430.1 25.949 158 100 3 25 181 29 170 3.21e-12 70.1
Msa0580200 AT5G23430.1 27.273 154 97 2 28 181 74 212 5.38e-11 66.2
Msa0580200 AT3G21540.1 28.313 166 104 4 25 190 76 226 1.40e-11 68.2
Msa0580200 AT5G52820.1 29.221 154 95 2 28 181 332 471 3.12e-11 66.2
Msa0580200 AT5G13480.3 27.811 169 105 5 16 182 240 393 3.41e-11 66.6
Msa0580200 AT5G13480.2 27.976 168 104 5 16 181 263 415 3.70e-11 66.6
Msa0580200 AT5G13480.4 27.811 169 105 5 16 182 240 393 4.01e-11 66.6
Msa0580200 AT5G13480.1 27.811 169 105 5 16 182 252 405 4.32e-11 66.2
Msa0580200 AT5G25150.1 27.647 170 108 3 12 181 417 571 4.73e-11 66.2
Msa0580200 AT1G73720.1 29.878 164 108 2 21 184 221 377 5.45e-11 65.9
Msa0580200 AT5G25150.2 27.647 170 108 3 12 181 417 571 5.90e-11 65.9
Msa0580200 AT4G02730.1 29.139 151 97 3 41 187 17 161 7.54e-11 64.3
Msa0580200 AT2G41500.1 27.778 162 101 4 21 181 347 493 7.69e-11 65.5
Msa0580200 AT2G41500.2 27.778 162 101 4 21 181 347 493 7.69e-11 65.5

Find 173 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAACACCCTTTGATTTA+TGG 0.105744 4_1:+85263078 None:intergenic
TTGATAATTCTTGCATTATA+TGG 0.142799 4_1:-85263346 Msa0580200:CDS
CTAATTGGATTCGAGAATTT+AGG 0.165281 4_1:+85264755 None:intergenic
CCTCTTGTTGCTCCCTGTTT+TGG 0.194498 4_1:-85259653 Msa0580200:three_prime_UTR
AAGCTTAAGGGAACAAATTC+AGG 0.235111 4_1:-85261835 Msa0580200:intron
CTCAACACCCTTTGATTTAT+GGG 0.254796 4_1:+85263079 None:intergenic
GCAAGATGGTTTCTGCTCTT+TGG 0.262968 4_1:-85260559 Msa0580200:CDS
TGTGCTGTCTTGCCAATATA+AGG 0.270585 4_1:+85259492 None:intergenic
ACCTTGGAATTCTTTAATAA+TGG 0.273035 4_1:+85263011 None:intergenic
TGTACACGGGCGGACGTTAA+TGG 0.274606 4_1:+85259712 None:intergenic
GTGGAACGGTTCAGATTAAT+TGG 0.283065 4_1:-85264711 Msa0580200:CDS
GGGTAGCCTGGGACCCTTTA+GGG 0.287919 4_1:-85263157 Msa0580200:CDS
CCTGTATTATTTAAGCTTAA+GGG 0.292681 4_1:-85261847 Msa0580200:CDS
ATCTCATGTCAAGGACATTA+TGG 0.295539 4_1:-85263414 Msa0580200:CDS
GGTTTAGGCAGTATTAATTC+TGG 0.297106 4_1:-85259967 Msa0580200:CDS
AAACTGTCATTGCCTTATAT+TGG 0.298149 4_1:-85259504 Msa0580200:three_prime_UTR
TTGCAAGCATGTTATTTCTA+AGG 0.302678 4_1:-85263042 Msa0580200:CDS
TCCTGTATTATTTAAGCTTA+AGG 0.303126 4_1:-85261848 Msa0580200:CDS
TTATGGTCAGTTAAACCTTC+TGG 0.304531 4_1:-85264504 Msa0580200:CDS
ATAGAAGCATCTGCGGATAT+TGG 0.310571 4_1:-85260276 Msa0580200:CDS
CAGAATATGTAAACCAAAAC+AGG 0.313462 4_1:+85259640 None:intergenic
AAGAAGTTACGGCAGATATT+AGG 0.314518 4_1:-85260110 Msa0580200:CDS
GGAAAGAAAGAAAGGGAATT+TGG 0.319336 4_1:+85264825 None:intergenic
GTTATTCGCTTCTCTTCTTC+CGG 0.322943 4_1:-85264414 Msa0580200:intron
TAGGAGGTGAATTGTTAATA+TGG 0.323433 4_1:-85264143 Msa0580200:CDS
TAGAAGCATCTGCGGATATT+GGG 0.324017 4_1:-85260275 Msa0580200:CDS
TGTAGCAGAAAGCATGAAAA+TGG 0.326121 4_1:-85260328 Msa0580200:CDS
TCAGGGGAATTGTTAGCTTC+TGG 0.327465 4_1:-85264289 Msa0580200:intron
TACCAGGTAATATCTGTTAC+TGG 0.342872 4_1:+85260708 None:intergenic
GGGGTAGCCTGGGACCCTTT+AGG 0.345674 4_1:-85263158 Msa0580200:CDS
ACGGCAAATACAATGCGATA+TGG 0.353051 4_1:+85260810 None:intergenic
GCGAGGAGAATGCTAAATAA+TGG 0.354160 4_1:+85260580 None:intergenic
TCTTAAGAACCTTCCATGTT+TGG 0.355215 4_1:+85264097 None:intergenic
TTTCTAGAAAAGATCTTTCT+CGG 0.365269 4_1:-85262089 Msa0580200:intron
TGATAATTCTTGCATTATAT+GGG 0.369746 4_1:-85263345 Msa0580200:CDS
TAATTGGATTCGAGAATTTA+GGG 0.372592 4_1:+85264756 None:intergenic
GACGTGATCATCAAATCAAC+TGG 0.376440 4_1:-85260204 Msa0580200:CDS
GCTTCACTTTGTTTACCATC+TGG 0.376477 4_1:+85259910 None:intergenic
GAAAGGGAATTTGGCGCTCT+TGG 0.376847 4_1:+85264834 None:intergenic
ATTTCAGGTTCTTACAAAAT+CGG 0.390240 4_1:-85262147 Msa0580200:intron
ACAACTAGGACTGCAAATAT+TGG 0.390908 4_1:-85260045 Msa0580200:CDS
GCAATGACAGTTTGCTAACT+AGG 0.397079 4_1:+85259514 None:intergenic
AATAAACCGCTTAGTGGTTT+AGG 0.401829 4_1:-85259982 Msa0580200:CDS
GATGGGCGTGCTCTTTGAAC+TGG 0.406251 4_1:+85259807 None:intergenic
CCTGGCTGGCTTATTTGTGA+TGG 0.408283 4_1:+85259789 None:intergenic
GGGGCTTACTGATGTAAATT+CGG 0.412302 4_1:+85263099 None:intergenic
AATAGGTGTAATGCGCTTCC+TGG 0.413685 4_1:+85259771 None:intergenic
TGTTTACCATCTGGATTAGC+TGG 0.414235 4_1:+85259919 None:intergenic
AATCATGGATCAATTGCAAT+AGG 0.415154 4_1:+85259754 None:intergenic
CCCTTAAGCTTAAATAATAC+AGG 0.415889 4_1:+85261847 None:intergenic
GTCGAAATCGGCGCCGGCGG+TGG 0.417147 4_1:+85264633 None:intergenic
GAGTACCTTGATGTCGAAAT+CGG 0.419824 4_1:+85264621 None:intergenic
ACAGAAAATAAACCGCTTAG+TGG 0.420179 4_1:-85259988 Msa0580200:CDS
AATGATGCTGTACTGCCAAC+TGG 0.420457 4_1:-85260366 Msa0580200:CDS
GGACGTTAATGGAGCTTCTC+TGG 0.427242 4_1:+85259723 None:intergenic
TCTCCAATAGCAATATTTGC+TGG 0.427714 4_1:-85260744 Msa0580200:CDS
TACCCATGCACACTATGTTC+AGG 0.428891 4_1:-85263180 Msa0580200:CDS
AGAACATAAAGCTGATGATA+TGG 0.434203 4_1:-85260139 Msa0580200:CDS
CGGCAAATACAATGCGATAT+GGG 0.436720 4_1:+85260811 None:intergenic
GTGCAATTATAGCTGACAAT+AGG 0.437372 4_1:-85260173 Msa0580200:CDS
CGAGGAGAATGCTAAATAAT+GGG 0.437934 4_1:+85260581 None:intergenic
AGTTGGCAGTACAGCATCAT+TGG 0.441293 4_1:+85260368 None:intergenic
AAGCAATATACTTCCCTAAA+GGG 0.441686 4_1:+85263144 None:intergenic
AGGAGAGAGGATGAAAATCT+AGG 0.444191 4_1:+85264665 None:intergenic
CTGGCTGGCTTATTTGTGAT+GGG 0.451089 4_1:+85259790 None:intergenic
CAAAACTGTAATACAAGATA+AGG 0.454159 4_1:-85260232 Msa0580200:CDS
ATGAAAATCTAGGGTCAAAA+CGG 0.456456 4_1:+85264675 None:intergenic
TCATTTCTACTTGTGCCTGC+AGG 0.457534 4_1:-85262827 Msa0580200:intron
TGATGTAAATTCGGCAAGTC+CGG 0.458166 4_1:+85263108 None:intergenic
GAAGCAATATACTTCCCTAA+AGG 0.462365 4_1:+85263143 None:intergenic
AGATGGTTTCTGCTCTTTGG+TGG 0.462913 4_1:-85260556 Msa0580200:CDS
GAGGTAAGGGAAAGAAAGAA+AGG 0.467887 4_1:+85264817 None:intergenic
AGGCCAGCAAATATTGCTAT+TGG 0.470462 4_1:+85260741 None:intergenic
GAAAATGGAAGTGGAAGAAA+AGG 0.470474 4_1:-85260313 Msa0580200:CDS
CTTTCTTTAGAAGATTAGCT+TGG 0.475618 4_1:-85262862 Msa0580200:CDS
GATGGTGGATATATCATATC+CGG 0.477811 4_1:-85263374 Msa0580200:CDS
AGCTAATCTTCTAAAGAAAG+AGG 0.478727 4_1:+85262865 None:intergenic
AGTTTGCTAACTAGGAAAGT+TGG 0.479811 4_1:+85259522 None:intergenic
AATGCTAAATAATGGGCATC+AGG 0.480540 4_1:+85260588 None:intergenic
GGAAGGTTCTTAAGATGTTA+CGG 0.484149 4_1:-85264089 Msa0580200:intron
TTGTTAGCTTCTGGTTCTGA+TGG 0.487437 4_1:-85264280 Msa0580200:intron
GAAATCTAGAAACTGAGGTA+AGG 0.488899 4_1:+85264803 None:intergenic
GCAAGAATTATCAACTGATC+CGG 0.489164 4_1:+85263355 None:intergenic
GGCGCCGGCGGTGGCGAGAG+TGG 0.492172 4_1:+85264642 None:intergenic
GGTGTAATGCGCTTCCTGGC+TGG 0.492898 4_1:+85259775 None:intergenic
TCTGAGGCAGCACAAAAGAC+AGG 0.494736 4_1:-85259841 Msa0580200:CDS
TTGCTTCTCTTAGTTCTGAC+CGG 0.499917 4_1:-85263127 Msa0580200:CDS
CTATTGACATAAGTAACTAC+TGG 0.500469 4_1:+85264465 None:intergenic
TCCTCCACTCTCGCCACCGC+CGG 0.506417 4_1:-85264646 Msa0580200:CDS
TTGTTTCGACGCCTTCTCTT+CGG 0.508062 4_1:+85259942 None:intergenic
ATCAAATCAACTGGGAATGT+TGG 0.509725 4_1:-85260195 Msa0580200:CDS
TGAAAATCTAGGGTCAAAAC+GGG 0.513397 4_1:+85264676 None:intergenic
TATGGTCATTGAAGAAGTTA+CGG 0.513659 4_1:-85260121 Msa0580200:CDS
CCAAAACAGGGAGCAACAAG+AGG 0.515573 4_1:+85259653 None:intergenic
TGTTCTAGAAGAAAATGTCT+TGG 0.518483 4_1:-85260418 Msa0580200:intron
TCTAGAAGAAAATGTCTTGG+AGG 0.520903 4_1:-85260415 Msa0580200:intron
ACTAAAACAAGAGGTCCAAA+AGG 0.520945 4_1:+85259554 None:intergenic
TCAACACCCTTTGATTTATG+GGG 0.521191 4_1:+85263080 None:intergenic
GAGTTCGAAAATGACGAACT+TGG 0.523533 4_1:-85260534 Msa0580200:CDS
CTCCAGTAACAGATATTACC+TGG 0.525209 4_1:-85260710 Msa0580200:intron
ACCCATGCACACTATGTTCA+GGG 0.526102 4_1:-85263179 Msa0580200:CDS
AAACAGGGAGCAACAAGAGG+GGG 0.527404 4_1:+85259656 None:intergenic
CAAAACAGGGAGCAACAAGA+GGG 0.528650 4_1:+85259654 None:intergenic
CAGTAAGCCCCATAAATCAA+AGG 0.530540 4_1:-85263087 Msa0580200:CDS
ACAAAGTGAAGCAGAAGAGA+AGG 0.531573 4_1:-85259899 Msa0580200:CDS
GTACTGCCAACTGGGAGTGT+TGG 0.531914 4_1:-85260357 Msa0580200:CDS
CAGCATCATTGGCTGTCTGA+AGG 0.533000 4_1:+85260379 None:intergenic
GCACACGGAAGCTGTATAGC+AGG 0.533198 4_1:+85261901 None:intergenic
AAGCTACATTCAACGGATAC+CGG 0.534046 4_1:-85264120 Msa0580200:CDS
ACAAGTAGAAATGAACCATC+TGG 0.534204 4_1:+85262836 None:intergenic
GGAGAGAGGATGAAAATCTA+GGG 0.535173 4_1:+85264666 None:intergenic
GCCATTATTAAAGAATTCCA+AGG 0.535247 4_1:-85263012 Msa0580200:intron
ATACTTCCCTAAAGGGTCCC+AGG 0.540607 4_1:+85263151 None:intergenic
CATGGGTATCCAACGTCTGA+AGG 0.542223 4_1:+85263195 None:intergenic
CTGAATTAGATCTCATGTCA+AGG 0.544197 4_1:-85263423 Msa0580200:intron
TGCTTACTTGATAAGCAGTA+AGG 0.544917 4_1:+85260507 None:intergenic
CCATCACAAATAAGCCAGCC+AGG 0.546404 4_1:-85259789 Msa0580200:CDS
CACCATCAGTAGACCACTCC+AGG 0.547065 4_1:+85263390 None:intergenic
AAATCTAGAAACTGAGGTAA+GGG 0.549698 4_1:+85264804 None:intergenic
AAGAACCTTCCATGTTTGGC+CGG 0.550032 4_1:+85264101 None:intergenic
AAGAGGGCAATGTTTCATCA+TGG 0.552525 4_1:+85262882 None:intergenic
AGTAAGCCCCATAAATCAAA+GGG 0.552990 4_1:-85263086 Msa0580200:CDS
AGGTAAGGGAAAGAAAGAAA+GGG 0.554936 4_1:+85264818 None:intergenic
AGAAGCATCTGCGGATATTG+GGG 0.556121 4_1:-85260274 Msa0580200:CDS
CAATGAATTCAATGTGGCCA+CGG 0.558304 4_1:+85260791 None:intergenic
AGCATCATTGGCTGTCTGAA+GGG 0.562358 4_1:+85260380 None:intergenic
CTTGATGTCGAAATCGGCGC+CGG 0.562663 4_1:+85264627 None:intergenic
AGAAAGCATGAAAATGGAAG+TGG 0.567606 4_1:-85260322 Msa0580200:CDS
GATCGAAGATCGAAAATGAA+AGG 0.568510 4_1:-85264733 Msa0580200:exon
CAACGGATACCGGCCAAACA+TGG 0.571072 4_1:-85264110 Msa0580200:CDS
ACATGATCATTGAGACAACT+AGG 0.572546 4_1:-85260059 Msa0580200:CDS
TTAGCATTCTCCTCGCAAGA+TGG 0.577028 4_1:-85260573 Msa0580200:CDS
GATGTCGAAATCGGCGCCGG+CGG 0.578100 4_1:+85264630 None:intergenic
GCTAATCTTCTAAAGAAAGA+GGG 0.578416 4_1:+85262866 None:intergenic
GTGGCGAGAGTGGAGGAGAG+AGG 0.578840 4_1:+85264652 None:intergenic
TAATTCTGGAGCCGAAGAGA+AGG 0.580982 4_1:-85259953 Msa0580200:CDS
AATATGGAAGCTACATTCAA+CGG 0.583979 4_1:-85264127 Msa0580200:CDS
ATATCGCATTGTATTTGCCG+TGG 0.587379 4_1:-85260808 Msa0580200:CDS
GACCTGGAGTGGTCTACTGA+TGG 0.591206 4_1:-85263392 Msa0580200:CDS
CGAAGATCGAAAATGAAAGG+TGG 0.592725 4_1:-85264730 Msa0580200:exon
AAAACAGGGAGCAACAAGAG+GGG 0.596797 4_1:+85259655 None:intergenic
CGGCGCCGATTTCGACATCA+AGG 0.597052 4_1:-85264626 Msa0580200:intron
GGAAGAAAAGGTTGATGACA+TGG 0.598747 4_1:-85260301 Msa0580200:CDS
ATGATGCTGTACTGCCAACT+GGG 0.600017 4_1:-85260365 Msa0580200:CDS
TGTCAAGGACATTATGGACC+TGG 0.600660 4_1:-85263408 Msa0580200:CDS
ATCGAAAATGAAAGGTGGAA+CGG 0.602727 4_1:-85264725 Msa0580200:exon
GCCGGCGGTGGCGAGAGTGG+AGG 0.602972 4_1:+85264645 None:intergenic
ATGCTGTCCGAAGTTGATTG+TGG 0.605226 4_1:+85259868 None:intergenic
CTGGAGTGGTCTACTGATGG+TGG 0.606311 4_1:-85263389 Msa0580200:CDS
AGATTAGCTTGGTCTCCAGA+TGG 0.606836 4_1:-85262851 Msa0580200:CDS
CCCCTGAACATAGTGTGCAT+GGG 0.610840 4_1:+85263178 None:intergenic
ACAACAGCTTTGCTTGCACA+CGG 0.611738 4_1:+85261886 None:intergenic
AGGAACTAACCTTCAGACGT+TGG 0.618886 4_1:-85263204 Msa0580200:CDS
AGATAAACCACAATCAACTT+CGG 0.619414 4_1:-85259875 Msa0580200:CDS
CTGAGGCAGCACAAAAGACA+GGG 0.619610 4_1:-85259840 Msa0580200:CDS
AAACAACCAGCTAATCCAGA+TGG 0.634861 4_1:-85259925 Msa0580200:CDS
AACAGGGAGCAACAAGAGGG+GGG 0.637316 4_1:+85259657 None:intergenic
ATGTAGAAATCTAGAAACTG+AGG 0.637464 4_1:+85264798 None:intergenic
ATTATATGGGATGTTAACAA+AGG 0.639783 4_1:-85263332 Msa0580200:intron
GGATACCGGCCAAACATGGA+AGG 0.640280 4_1:-85264106 Msa0580200:CDS
CTGTTACTGGAGCATAGTGA+AGG 0.641031 4_1:+85260721 None:intergenic
CCCATGCACACTATGTTCAG+GGG 0.644214 4_1:-85263178 Msa0580200:CDS
TTCGGACAGCATAAAATCTG+AGG 0.646284 4_1:-85259857 Msa0580200:CDS
AAACCTATGACTAAAACAAG+AGG 0.649877 4_1:+85259545 None:intergenic
AGGACATTATGGACCTGGAG+TGG 0.656666 4_1:-85263403 Msa0580200:CDS
ACTGCACCAACACTCCCAGT+TGG 0.657606 4_1:+85260351 None:intergenic
CATGGACATAGAAGCATCTG+CGG 0.658877 4_1:-85260283 Msa0580200:CDS
AGAGCAGAAACCATCTTGCG+AGG 0.660888 4_1:+85260563 None:intergenic
ACGTGATCATCAAATCAACT+GGG 0.672733 4_1:-85260203 Msa0580200:CDS
CCATGCACACTATGTTCAGG+GGG 0.683808 4_1:-85263177 Msa0580200:CDS
ATACTGCCTAAACCACTAAG+CGG 0.687500 4_1:+85259976 None:intergenic
AATGTACAATGAATTCAATG+TGG 0.699967 4_1:+85260785 None:intergenic
AGAATATGTAAACCAAAACA+GGG 0.715313 4_1:+85259641 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTATTTTAAATTAAAA+CGG + chr4_1:85260647-85260666 None:intergenic 0.0%
!!! TTTTTTTTTTTTTATGTTTC+AGG - chr4_1:85259964-85259983 Msa0580200:CDS 10.0%
!!! TTTTTTTTTTTTATGTTTCA+GGG - chr4_1:85259965-85259984 Msa0580200:CDS 10.0%
!!! ATTATTTAGCTTTTTTTTTT+AGG - chr4_1:85260245-85260264 Msa0580200:CDS 10.0%
!!! AATTATGATGTTTTTTTTTT+GGG - chr4_1:85263622-85263641 Msa0580200:intron 10.0%
!! TAACTAATTAATTGAATGAT+GGG + chr4_1:85259693-85259712 None:intergenic 15.0%
!! TTAACTAATTAATTGAATGA+TGG + chr4_1:85259694-85259713 None:intergenic 15.0%
!!! TTTTTTTTTTTATGTTTCAG+GGG - chr4_1:85259966-85259985 Msa0580200:CDS 15.0%
!!! CTATTTTTTTGTTTCTTTTT+AGG - chr4_1:85260109-85260128 Msa0580200:CDS 15.0%
!!! AACTAACAATACATAAATTT+TGG + chr4_1:85261922-85261941 None:intergenic 15.0%
!!! ATGATGGTTTTTATAATATT+GGG + chr4_1:85262568-85262587 None:intergenic 15.0%
!! TAGACAATTATTGAATAAAT+AGG - chr4_1:85262813-85262832 Msa0580200:intron 15.0%
!! AGACAATTATTGAATAAATA+GGG - chr4_1:85262814-85262833 Msa0580200:intron 15.0%
!!! GAATTATGATGTTTTTTTTT+TGG - chr4_1:85263621-85263640 Msa0580200:intron 15.0%
!! TTTCAATGAAATGAATTTAC+CGG + chr4_1:85259879-85259898 None:intergenic 20.0%
!! AAAAAAAAAAATCAACAGCA+GGG + chr4_1:85260029-85260048 None:intergenic 20.0%
!! AAAAAAAAAAAATCAACAGC+AGG + chr4_1:85260030-85260049 None:intergenic 20.0%
!!! TTTTTTTGTTTCTTTTTAGG+AGG - chr4_1:85260112-85260131 Msa0580200:CDS 20.0%
!!! AAGAAAATTATTGATTTCCT+AGG - chr4_1:85260458-85260477 Msa0580200:intron 20.0%
!!! AATTTTGTTTGATTTCTTTC+CGG - chr4_1:85260670-85260689 Msa0580200:intron 20.0%
!! AGTAAAGGTTATTATTTCAT+AGG - chr4_1:85260708-85260727 Msa0580200:intron 20.0%
!!! TTGATAATTCTTGCATTATA+TGG - chr4_1:85260925-85260944 Msa0580200:intron 20.0%
!! TGATAATTCTTGCATTATAT+GGG - chr4_1:85260926-85260945 Msa0580200:intron 20.0%
!! GCAAAAAAAGTAAGATAAAT+TGG + chr4_1:85261499-85261518 None:intergenic 20.0%
!! AAATAGTATATATCATTCAG+TGG + chr4_1:85262031-85262050 None:intergenic 20.0%
!!! TATACTATTTTCTTCCTTTA+TGG - chr4_1:85262041-85262060 Msa0580200:intron 20.0%
!!! ATGATAAAAAGTATGCTTTT+GGG + chr4_1:85262237-85262256 None:intergenic 20.0%
!!! AATGATAAAAAGTATGCTTT+TGG + chr4_1:85262238-85262257 None:intergenic 20.0%
!!! TTTTTATAATATTGGGCAAA+AGG + chr4_1:85262561-85262580 None:intergenic 20.0%
!!! CATGATGGTTTTTATAATAT+TGG + chr4_1:85262569-85262588 None:intergenic 20.0%
!! CAATATTATAAAAACCATCA+TGG - chr4_1:85262567-85262586 Msa0580200:intron 20.0%
!! TCCGTTCAATTTATTAAAAT+AGG - chr4_1:85262623-85262642 Msa0580200:intron 20.0%
!!! GCCTATTTTAATAAATTGAA+CGG + chr4_1:85262627-85262646 None:intergenic 20.0%
!! TCCTACAATATCAATATTAT+TGG - chr4_1:85263087-85263106 Msa0580200:CDS 20.0%
!! ACCAATAATATTGATATTGT+AGG + chr4_1:85263091-85263110 None:intergenic 20.0%
!! TACAATATCAATATTATTGG+TGG - chr4_1:85263090-85263109 Msa0580200:CDS 20.0%
!!! ATGTAGTTTCTATTTCTTAT+TGG - chr4_1:85263118-85263137 Msa0580200:CDS 20.0%
!! TTGTTTATCTATTGATATAG+TGG - chr4_1:85263262-85263281 Msa0580200:intron 20.0%
!!! ACTTTAAAATAATGATTGGT+AGG + chr4_1:85263362-85263381 None:intergenic 20.0%
!!! CAGAACTTTAAAATAATGAT+TGG + chr4_1:85263366-85263385 None:intergenic 20.0%
! TAATTGGATTCGAGAATTTA+GGG + chr4_1:85259518-85259537 None:intergenic 25.0%
! AGAAATCTAATCAGAAACAT+TGG + chr4_1:85260091-85260110 None:intergenic 25.0%
! AGCTAAATAATGCAAATAAG+TGG + chr4_1:85260236-85260255 None:intergenic 25.0%
! CATTTCTCTCTTTCATTAAA+TGG + chr4_1:85260350-85260369 None:intergenic 25.0%
! CATTTAATGAAAGAGAGAAA+TGG - chr4_1:85260348-85260367 Msa0580200:CDS 25.0%
! CAAAATAAGAACTTGAAATG+TGG - chr4_1:85260506-85260525 Msa0580200:intron 25.0%
! AAAAGTAGATATGGAAGTAA+AGG - chr4_1:85260693-85260712 Msa0580200:intron 25.0%
!!! GTATGATTGATTTTTGTGAA+TGG + chr4_1:85260755-85260774 None:intergenic 25.0%
! ATTGATGCAGTAAAACATAA+AGG + chr4_1:85260804-85260823 None:intergenic 25.0%
! ATTATATGGGATGTTAACAA+AGG - chr4_1:85260939-85260958 Msa0580200:intron 25.0%
! ACCTTGGAATTCTTTAATAA+TGG + chr4_1:85261263-85261282 None:intergenic 25.0%
! TGTGTATTATTCATTGCAAA+TGG - chr4_1:85261578-85261597 Msa0580200:intron 25.0%
!! GATTTTCTGTTATAAAACAG+AGG + chr4_1:85261721-85261740 None:intergenic 25.0%
! TATGATAGGATACTGAATTT+GGG + chr4_1:85261792-85261811 None:intergenic 25.0%
! TTATGATAGGATACTGAATT+TGG + chr4_1:85261793-85261812 None:intergenic 25.0%
! AATCTCTATGCAATTATGAT+AGG + chr4_1:85261806-85261825 None:intergenic 25.0%
! TTCCTGTGAATGAAATATAA+TGG + chr4_1:85261866-85261885 None:intergenic 25.0%
! ATAGTTTAGATGCAACTTAT+AGG - chr4_1:85262000-85262019 Msa0580200:intron 25.0%
!! ATTTTGTAAGAACCTGAAAT+GGG + chr4_1:85262124-85262143 None:intergenic 25.0%
!!! ATTTCAGGTTCTTACAAAAT+CGG - chr4_1:85262124-85262143 Msa0580200:CDS 25.0%
!! TTTCTAGAAAAGATCTTTCT+CGG - chr4_1:85262182-85262201 Msa0580200:intron 25.0%
! ATTATTTAACCTTGATATGC+AGG - chr4_1:85262347-85262366 Msa0580200:intron 25.0%
! TCCTGTATTATTTAAGCTTA+AGG - chr4_1:85262423-85262442 Msa0580200:intron 25.0%
! CCTGTATTATTTAAGCTTAA+GGG - chr4_1:85262424-85262443 Msa0580200:intron 25.0%
! AACTAGTTATACATAGTTAC+TGG + chr4_1:85262477-85262496 None:intergenic 25.0%
! TCACAATCTTTACTAATAAG+AGG + chr4_1:85262698-85262717 None:intergenic 25.0%
! TTATTAGTAAAGATTGTGAG+AGG - chr4_1:85262699-85262718 Msa0580200:intron 25.0%
! TTAGACAGGTTTATGTTATT+AGG - chr4_1:85262757-85262776 Msa0580200:intron 25.0%
! TAGGGAAATTGAATATTGAT+TGG - chr4_1:85262832-85262851 Msa0580200:CDS 25.0%
!!! AATGGGTTCTTTTACAAATT+AGG + chr4_1:85262935-85262954 None:intergenic 25.0%
!!! TGTTTTTGTTTATTGCAGAT+GGG - chr4_1:85263426-85263445 Msa0580200:intron 25.0%
! AATGTACAATGAATTCAATG+TGG + chr4_1:85263489-85263508 None:intergenic 25.0%
! TTACCTGGTAAATGTTATAA+CGG - chr4_1:85263576-85263595 Msa0580200:intron 25.0%
!!! TGATGTTTTTTTTTTGGGAA+AGG - chr4_1:85263627-85263646 Msa0580200:intron 25.0%
! AATCATAGCATGAAATGAAA+GGG + chr4_1:85263795-85263814 None:intergenic 25.0%
!!! TTCTAGAACAATGTAGAAAA+GGG + chr4_1:85263843-85263862 None:intergenic 25.0%
! CAAAACTGTAATACAAGATA+AGG - chr4_1:85264039-85264058 Msa0580200:intron 25.0%
! AGAATATGTAAACCAAAACA+GGG + chr4_1:85264633-85264652 None:intergenic 25.0%
!!! TCATTTTGAAGATTTCCTTT+TGG - chr4_1:85264702-85264721 Msa0580200:CDS 25.0%
!! TTTATGTTATGACTTTTGTG+AGG - chr4_1:85264827-85264846 Msa0580200:five_prime_UTR 25.0%
AAATCTAGAAACTGAGGTAA+GGG + chr4_1:85259470-85259489 None:intergenic 30.0%
ATGTAGAAATCTAGAAACTG+AGG + chr4_1:85259476-85259495 None:intergenic 30.0%
CTAATTGGATTCGAGAATTT+AGG + chr4_1:85259519-85259538 None:intergenic 30.0%
! TTTTCGATCTTCGATCTAAT+TGG + chr4_1:85259534-85259553 None:intergenic 30.0%
! ATGAAAATCTAGGGTCAAAA+CGG + chr4_1:85259599-85259618 None:intergenic 30.0%
TGTTCTAATCTTCACAGTTA+TGG - chr4_1:85259750-85259769 Msa0580200:exon 30.0%
CTATTGACATAAGTAACTAC+TGG + chr4_1:85259809-85259828 None:intergenic 30.0%
TAGGAGGTGAATTGTTAATA+TGG - chr4_1:85260128-85260147 Msa0580200:CDS 30.0%
AATATGGAAGCTACATTCAA+CGG - chr4_1:85260144-85260163 Msa0580200:CDS 30.0%
TGCTAACTAATTGTCGATAA+CGG - chr4_1:85260318-85260337 Msa0580200:CDS 30.0%
AATGCGATGATAAATAGAGA+AGG - chr4_1:85260375-85260394 Msa0580200:CDS 30.0%
ATGCGATGATAAATAGAGAA+GGG - chr4_1:85260376-85260395 Msa0580200:CDS 30.0%
!! AGAAGGGTATCAAAGAAAAA+AGG - chr4_1:85260392-85260411 Msa0580200:CDS 30.0%
TTTAAATGTAGAAGAAGCCA+AGG + chr4_1:85260606-85260625 None:intergenic 30.0%
!! TACTTCCATATCTACTTTTC+CGG + chr4_1:85260692-85260711 None:intergenic 30.0%
CATCAATTAGCTGGTTAAAA+TGG - chr4_1:85260817-85260836 Msa0580200:CDS 30.0%
AAGCAATATACTTCCCTAAA+GGG + chr4_1:85261130-85261149 None:intergenic 30.0%
!! TTGCAAGCATGTTATTTCTA+AGG - chr4_1:85261229-85261248 Msa0580200:intron 30.0%
GCCATTATTAAAGAATTCCA+AGG - chr4_1:85261259-85261278 Msa0580200:intron 30.0%
! TAGATATCTAAAGCTAACCT+TGG + chr4_1:85261279-85261298 None:intergenic 30.0%
! GTATTTGATTTCTCTGTAGA+TGG - chr4_1:85261304-85261323 Msa0580200:intron 30.0%
! GCTAATCTTCTAAAGAAAGA+GGG + chr4_1:85261408-85261427 None:intergenic 30.0%
! AGCTAATCTTCTAAAGAAAG+AGG + chr4_1:85261409-85261428 None:intergenic 30.0%
! CTTTCTTTAGAAGATTAGCT+TGG - chr4_1:85261409-85261428 Msa0580200:intron 30.0%
! ATCAAGATTAACTTCTGGTT+AGG + chr4_1:85261476-85261495 None:intergenic 30.0%
ATTGGATCAAGATTAACTTC+TGG + chr4_1:85261481-85261500 None:intergenic 30.0%
GTGAATAAGCTATTGCAATT+TGG - chr4_1:85261528-85261547 Msa0580200:intron 30.0%
TGTTATAAAACAGAGGATAG+GGG + chr4_1:85261714-85261733 None:intergenic 30.0%
CTGTTATAAAACAGAGGATA+GGG + chr4_1:85261715-85261734 None:intergenic 30.0%
TCTGTTATAAAACAGAGGAT+AGG + chr4_1:85261716-85261735 None:intergenic 30.0%
GTCCATTATATTTCATTCAC+AGG - chr4_1:85261861-85261880 Msa0580200:CDS 30.0%
ATATTTCATTCACAGGAAAG+TGG - chr4_1:85261868-85261887 Msa0580200:CDS 30.0%
ACAGTTCACTAAACAACAAA+GGG + chr4_1:85261977-85261996 None:intergenic 30.0%
! GATTTTGTAAGAACCTGAAA+TGG + chr4_1:85262125-85262144 None:intergenic 30.0%
CCCTTAAGCTTAAATAATAC+AGG + chr4_1:85262427-85262446 None:intergenic 30.0%
!! TATGTATAACTAGTTCTACG+TGG - chr4_1:85262482-85262501 Msa0580200:intron 30.0%
TTACAATTGAATTGCTTGAG+TGG - chr4_1:85262510-85262529 Msa0580200:intron 30.0%
TACAATTGAATTGCTTGAGT+GGG - chr4_1:85262511-85262530 Msa0580200:intron 30.0%
ATAACATAAACCTGTCTAAC+TGG + chr4_1:85262756-85262775 None:intergenic 30.0%
! ACTCTAACACTCTTTTATTG+GGG + chr4_1:85263202-85263221 None:intergenic 30.0%
! CACTCTAACACTCTTTTATT+GGG + chr4_1:85263203-85263222 None:intergenic 30.0%
! TCACTCTAACACTCTTTTAT+TGG + chr4_1:85263204-85263223 None:intergenic 30.0%
!!! CTGTTTTTGTTTATTGCAGA+TGG - chr4_1:85263425-85263444 Msa0580200:intron 30.0%
GAATCATAGCATGAAATGAA+AGG + chr4_1:85263796-85263815 None:intergenic 30.0%
!! CTTCTAGAACAATGTAGAAA+AGG + chr4_1:85263844-85263863 None:intergenic 30.0%
!! TGTTCTAGAAGAAAATGTCT+TGG - chr4_1:85263853-85263872 Msa0580200:intron 30.0%
AGAACATAAAGCTGATGATA+TGG - chr4_1:85264132-85264151 Msa0580200:CDS 30.0%
TATGGTCATTGAAGAAGTTA+CGG - chr4_1:85264150-85264169 Msa0580200:intron 30.0%
TATTAGGAAAAATGAAGCAG+AGG - chr4_1:85264177-85264196 Msa0580200:intron 30.0%
AGATAAACCACAATCAACTT+CGG - chr4_1:85264396-85264415 Msa0580200:intron 30.0%
AATCATGGATCAATTGCAAT+AGG + chr4_1:85264520-85264539 None:intergenic 30.0%
CAGAATATGTAAACCAAAAC+AGG + chr4_1:85264634-85264653 None:intergenic 30.0%
AAACCTATGACTAAAACAAG+AGG + chr4_1:85264729-85264748 None:intergenic 30.0%
AAACTGTCATTGCCTTATAT+TGG - chr4_1:85264767-85264786 Msa0580200:five_prime_UTR 30.0%
GGAAAGAAAGAAAGGGAATT+TGG + chr4_1:85259449-85259468 None:intergenic 35.0%
AGGTAAGGGAAAGAAAGAAA+GGG + chr4_1:85259456-85259475 None:intergenic 35.0%
GAAATCTAGAAACTGAGGTA+AGG + chr4_1:85259471-85259490 None:intergenic 35.0%
GATCGAAGATCGAAAATGAA+AGG - chr4_1:85259538-85259557 Msa0580200:three_prime_UTR 35.0%
ATCGAAAATGAAAGGTGGAA+CGG - chr4_1:85259546-85259565 Msa0580200:three_prime_UTR 35.0%
! TGAAAATCTAGGGTCAAAAC+GGG + chr4_1:85259598-85259617 None:intergenic 35.0%
! TAATTGAATGATGGGAGTGA+AGG + chr4_1:85259685-85259704 None:intergenic 35.0%
TTATGGTCAGTTAAACCTTC+TGG - chr4_1:85259767-85259786 Msa0580200:CDS 35.0%
TCTTAAGAACCTTCCATGTT+TGG + chr4_1:85260177-85260196 None:intergenic 35.0%
GGAAGGTTCTTAAGATGTTA+CGG - chr4_1:85260182-85260201 Msa0580200:CDS 35.0%
ATGCAAATAAGTGGTCATCA+AGG + chr4_1:85260227-85260246 None:intergenic 35.0%
ATAAGAACTTGAAATGTGGC+AGG - chr4_1:85260510-85260529 Msa0580200:intron 35.0%
CACATTTCAAACAAGCTGTA+AGG - chr4_1:85260577-85260596 Msa0580200:CDS 35.0%
TCTTTCCGGAAAAGTAGATA+TGG - chr4_1:85260684-85260703 Msa0580200:intron 35.0%
! GTTTTACTGCATCAATTAGC+TGG - chr4_1:85260808-85260827 Msa0580200:CDS 35.0%
CTGAATTAGATCTCATGTCA+AGG - chr4_1:85260848-85260867 Msa0580200:intron 35.0%
ATCTCATGTCAAGGACATTA+TGG - chr4_1:85260857-85260876 Msa0580200:intron 35.0%
!! GATGGTGGATATATCATATC+CGG - chr4_1:85260897-85260916 Msa0580200:intron 35.0%
GCAAGAATTATCAACTGATC+CGG + chr4_1:85260919-85260938 None:intergenic 35.0%
TTCTGAACATGCTTTAACAG+TGG - chr4_1:85260984-85261003 Msa0580200:intron 35.0%
!! ATTGTAGTTCTGAACAAGCT+TGG - chr4_1:85261010-85261029 Msa0580200:intron 35.0%
! AGGTTAGTTCCTGACATAAA+TGG + chr4_1:85261059-85261078 None:intergenic 35.0%
GAAGCAATATACTTCCCTAA+AGG + chr4_1:85261131-85261150 None:intergenic 35.0%
AGTAAGCCCCATAAATCAAA+GGG - chr4_1:85261185-85261204 Msa0580200:intron 35.0%
! TCAACACCCTTTGATTTATG+GGG + chr4_1:85261194-85261213 None:intergenic 35.0%
! CTCAACACCCTTTGATTTAT+GGG + chr4_1:85261195-85261214 None:intergenic 35.0%
! TCTCAACACCCTTTGATTTA+TGG + chr4_1:85261196-85261215 None:intergenic 35.0%
ACAAGTAGAAATGAACCATC+TGG + chr4_1:85261438-85261457 None:intergenic 35.0%
TATTGCAATTTGGTAGAACC+TGG - chr4_1:85261538-85261557 Msa0580200:intron 35.0%
GCTTAAAGCTCTTAAAACTG+TGG - chr4_1:85261605-85261624 Msa0580200:intron 35.0%
! GTTAGGAGTTCTAATAACTC+GGG + chr4_1:85261653-85261672 None:intergenic 35.0%
! GGTTAGGAGTTCTAATAACT+CGG + chr4_1:85261654-85261673 None:intergenic 35.0%
! AGTGAGTAAAGCATTCAGTT+AGG + chr4_1:85261691-85261710 None:intergenic 35.0%
TGACAATATTCTGTTAGGAG+GGG + chr4_1:85261743-85261762 None:intergenic 35.0%
GTGACAATATTCTGTTAGGA+GGG + chr4_1:85261744-85261763 None:intergenic 35.0%
TGTGACAATATTCTGTTAGG+AGG + chr4_1:85261745-85261764 None:intergenic 35.0%
GACTGTGACAATATTCTGTT+AGG + chr4_1:85261748-85261767 None:intergenic 35.0%
TCACAGTCATCACATCAATT+GGG - chr4_1:85261760-85261779 Msa0580200:intron 35.0%
AGTTCACTAAACAACAAAGG+GGG + chr4_1:85261975-85261994 None:intergenic 35.0%
CAGTTCACTAAACAACAAAG+GGG + chr4_1:85261976-85261995 None:intergenic 35.0%
CACAGTTCACTAAACAACAA+AGG + chr4_1:85261978-85261997 None:intergenic 35.0%
AAGCTTAAGGGAACAAATTC+AGG - chr4_1:85262436-85262455 Msa0580200:intron 35.0%
ACCAAAACTCTCGAATTTCT+GGG - chr4_1:85262860-85262879 Msa0580200:CDS 35.0%
AGATCCACTCCTAATATAGT+GGG - chr4_1:85263160-85263179 Msa0580200:CDS 35.0%
TATTGGGGTAAAACTCATGT+AGG + chr4_1:85263187-85263206 None:intergenic 35.0%
!! AAGAGTGTTAGAGTGAGTAT+TGG - chr4_1:85263208-85263227 Msa0580200:intron 35.0%
!! AAACGAATCATCGACTTGAT+CGG + chr4_1:85263317-85263336 None:intergenic 35.0%
TCTCCAATAGCAATATTTGC+TGG - chr4_1:85263527-85263546 Msa0580200:intron 35.0%
TACCAGGTAATATCTGTTAC+TGG + chr4_1:85263566-85263585 None:intergenic 35.0%
TAGCCGTTATAACATTTACC+AGG + chr4_1:85263582-85263601 None:intergenic 35.0%
GTAGTCCGTATTTGTTCAAA+AGG - chr4_1:85263657-85263676 Msa0580200:intron 35.0%
! GGTGACCTTTTGAACAAATA+CGG + chr4_1:85263665-85263684 None:intergenic 35.0%
!! AATGCTAAATAATGGGCATC+AGG + chr4_1:85263686-85263705 None:intergenic 35.0%
CGAGGAGAATGCTAAATAAT+GGG + chr4_1:85263693-85263712 None:intergenic 35.0%
TGCTTACTTGATAAGCAGTA+AGG + chr4_1:85263767-85263786 None:intergenic 35.0%
! CTATGATTCTAACTTGTACC+AGG - chr4_1:85263807-85263826 Msa0580200:intron 35.0%
GAAAAGGGAAATCAAAAACC+TGG + chr4_1:85263828-85263847 None:intergenic 35.0%
TCTAGAAGAAAATGTCTTGG+AGG - chr4_1:85263856-85263875 Msa0580200:intron 35.0%
! TGTAGCAGAAAGCATGAAAA+TGG - chr4_1:85263943-85263962 Msa0580200:intron 35.0%
! AGAAAGCATGAAAATGGAAG+TGG - chr4_1:85263949-85263968 Msa0580200:intron 35.0%
GAAAATGGAAGTGGAAGAAA+AGG - chr4_1:85263958-85263977 Msa0580200:intron 35.0%
ACGTGATCATCAAATCAACT+GGG - chr4_1:85264068-85264087 Msa0580200:intron 35.0%
ATCAAATCAACTGGGAATGT+TGG - chr4_1:85264076-85264095 Msa0580200:intron 35.0%
GTGCAATTATAGCTGACAAT+AGG - chr4_1:85264098-85264117 Msa0580200:CDS 35.0%
AAGAAGTTACGGCAGATATT+AGG - chr4_1:85264161-85264180 Msa0580200:intron 35.0%
ACATGATCATTGAGACAACT+AGG - chr4_1:85264212-85264231 Msa0580200:intron 35.0%
ACAACTAGGACTGCAAATAT+TGG - chr4_1:85264226-85264245 Msa0580200:intron 35.0%
!! CGGTTTATTTTCTGTGTCTT+CGG + chr4_1:85264278-85264297 None:intergenic 35.0%
ACAGAAAATAAACCGCTTAG+TGG - chr4_1:85264283-85264302 Msa0580200:CDS 35.0%
AATAAACCGCTTAGTGGTTT+AGG - chr4_1:85264289-85264308 Msa0580200:intron 35.0%
GGTTTAGGCAGTATTAATTC+TGG - chr4_1:85264304-85264323 Msa0580200:intron 35.0%
! TCTCTGGCATTGAAAAATCA+TGG + chr4_1:85264535-85264554 None:intergenic 35.0%
ACTAAAACAAGAGGTCCAAA+AGG + chr4_1:85264720-85264739 None:intergenic 35.0%
!! AGTTTGCTAACTAGGAAAGT+TGG + chr4_1:85264752-85264771 None:intergenic 35.0%
GAGGTAAGGGAAAGAAAGAA+AGG + chr4_1:85259457-85259476 None:intergenic 40.0%
CGAAGATCGAAAATGAAAGG+TGG - chr4_1:85259541-85259560 Msa0580200:three_prime_UTR 40.0%
GTGGAACGGTTCAGATTAAT+TGG - chr4_1:85259560-85259579 Msa0580200:three_prime_UTR 40.0%
GGAGAGAGGATGAAAATCTA+GGG + chr4_1:85259608-85259627 None:intergenic 40.0%
AGGAGAGAGGATGAAAATCT+AGG + chr4_1:85259609-85259628 None:intergenic 40.0%
GAGTACCTTGATGTCGAAAT+CGG + chr4_1:85259653-85259672 None:intergenic 40.0%
! AGCTTCTTTTGTGATCCAGA+AGG + chr4_1:85259785-85259804 None:intergenic 40.0%
GTTATTCGCTTCTCTTCTTC+CGG - chr4_1:85259857-85259876 Msa0580200:CDS 40.0%
!! TTGTTAGCTTCTGGTTCTGA+TGG - chr4_1:85259991-85260010 Msa0580200:CDS 40.0%
AAGCTACATTCAACGGATAC+CGG - chr4_1:85260151-85260170 Msa0580200:CDS 40.0%
!! AAGTTGTTTTGCACGAACCT+AGG + chr4_1:85260478-85260497 None:intergenic 40.0%
!! TGTGGCAGGTTTTGTGAATT+TGG - chr4_1:85260524-85260543 Msa0580200:CDS 40.0%
!! GCAGGTTTTGTGAATTTGGT+TGG - chr4_1:85260528-85260547 Msa0580200:CDS 40.0%
AACAAGCTGTAAGGTTTCCT+TGG - chr4_1:85260586-85260605 Msa0580200:CDS 40.0%
GCACTTGTTCCATTTATGTC+AGG - chr4_1:85261047-85261066 Msa0580200:intron 40.0%
!! TTGCTTCTCTTAGTTCTGAC+CGG - chr4_1:85261144-85261163 Msa0580200:intron 40.0%
TGATGTAAATTCGGCAAGTC+CGG + chr4_1:85261166-85261185 None:intergenic 40.0%
GGGGCTTACTGATGTAAATT+CGG + chr4_1:85261175-85261194 None:intergenic 40.0%
CAGTAAGCCCCATAAATCAA+AGG - chr4_1:85261184-85261203 Msa0580200:intron 40.0%
TTGTCACATACACTGACATC+AGG - chr4_1:85261328-85261347 Msa0580200:intron 40.0%
AAGAGGGCAATGTTTCATCA+TGG + chr4_1:85261392-85261411 None:intergenic 40.0%
TTGGTAGAACCTGGAAAATC+AGG - chr4_1:85261547-85261566 Msa0580200:intron 40.0%
! AGTTGTTTGCCTGATTTTCC+AGG + chr4_1:85261559-85261578 None:intergenic 40.0%
!! AGTTAGGAGAAAGTACTCTC+TGG + chr4_1:85261675-85261694 None:intergenic 40.0%
GTCACAGTCATCACATCAAT+TGG - chr4_1:85261759-85261778 Msa0580200:intron 40.0%
AGGATACTGAATTTGGGCTT+TGG + chr4_1:85261786-85261805 None:intergenic 40.0%
AGCTAAGCAGGAATCCATAA+AGG + chr4_1:85262058-85262077 None:intergenic 40.0%
! CTCACGTCACTAACATGTTT+TGG + chr4_1:85262320-85262339 None:intergenic 40.0%
ACCATTCACTTTGAACCTCT+AGG + chr4_1:85262728-85262747 None:intergenic 40.0%
GACCAAAACTCTCGAATTTC+TGG - chr4_1:85262859-85262878 Msa0580200:CDS 40.0%
! TCCCAGAAATTCGAGAGTTT+TGG + chr4_1:85262864-85262883 None:intergenic 40.0%
!! AACTCTCGAATTTCTGGGAT+AGG - chr4_1:85262865-85262884 Msa0580200:CDS 40.0%
AATCACTTCACAGTTATCGC+AGG + chr4_1:85262964-85262983 None:intergenic 40.0%
!! TTGGTGATCTCCCGTTTTAT+CGG - chr4_1:85263137-85263156 Msa0580200:CDS 40.0%
GAGATCCACTCCTAATATAG+TGG - chr4_1:85263159-85263178 Msa0580200:CDS 40.0%
CATGTAGGTCCCACTATATT+AGG + chr4_1:85263172-85263191 None:intergenic 40.0%
!! AACGAATCATCGACTTGATC+GGG + chr4_1:85263316-85263335 None:intergenic 40.0%
TAAAGTTCTGCCTCTTTCAG+AGG - chr4_1:85263376-85263395 Msa0580200:CDS 40.0%
CGGCAAATACAATGCGATAT+GGG + chr4_1:85263463-85263482 None:intergenic 40.0%
ACGGCAAATACAATGCGATA+TGG + chr4_1:85263464-85263483 None:intergenic 40.0%
ATATCGCATTGTATTTGCCG+TGG - chr4_1:85263463-85263482 Msa0580200:intron 40.0%
CAATGAATTCAATGTGGCCA+CGG + chr4_1:85263483-85263502 None:intergenic 40.0%
AGGCCAGCAAATATTGCTAT+TGG + chr4_1:85263533-85263552 None:intergenic 40.0%
CTCCAGTAACAGATATTACC+TGG - chr4_1:85263561-85263580 Msa0580200:intron 40.0%
GCGAGGAGAATGCTAAATAA+TGG + chr4_1:85263694-85263713 None:intergenic 40.0%
GAGTTCGAAAATGACGAACT+TGG - chr4_1:85263737-85263756 Msa0580200:intron 40.0%
!! GGAAGAAAAGGTTGATGACA+TGG - chr4_1:85263970-85263989 Msa0580200:intron 40.0%
!! ATAGAAGCATCTGCGGATAT+TGG - chr4_1:85263995-85264014 Msa0580200:intron 40.0%
!! TAGAAGCATCTGCGGATATT+GGG - chr4_1:85263996-85264015 Msa0580200:intron 40.0%
GACGTGATCATCAAATCAAC+TGG - chr4_1:85264067-85264086 Msa0580200:intron 40.0%
GAAAAATGAAGCAGAGGAGA+AGG - chr4_1:85264183-85264202 Msa0580200:intron 40.0%
ATACTGCCTAAACCACTAAG+CGG + chr4_1:85264298-85264317 None:intergenic 40.0%
AAACAACCAGCTAATCCAGA+TGG - chr4_1:85264346-85264365 Msa0580200:intron 40.0%
!! TGTTTACCATCTGGATTAGC+TGG + chr4_1:85264355-85264374 None:intergenic 40.0%
! GCTTCACTTTGTTTACCATC+TGG + chr4_1:85264364-85264383 None:intergenic 40.0%
ACAAAGTGAAGCAGAAGAGA+AGG - chr4_1:85264372-85264391 Msa0580200:intron 40.0%
TTCGGACAGCATAAAATCTG+AGG - chr4_1:85264414-85264433 Msa0580200:intron 40.0%
ACAAAAAAGATGTACACGGG+CGG + chr4_1:85264572-85264591 None:intergenic 40.0%
CGCACAAAAAAGATGTACAC+GGG + chr4_1:85264575-85264594 None:intergenic 40.0%
CCGCACAAAAAAGATGTACA+CGG + chr4_1:85264576-85264595 None:intergenic 40.0%
!!! CCGTGTACATCTTTTTTGTG+CGG - chr4_1:85264573-85264592 Msa0580200:intron 40.0%
!!! GGACCTCTTGTTTTAGTCAT+AGG - chr4_1:85264723-85264742 Msa0580200:exon 40.0%
!! GCAATGACAGTTTGCTAACT+AGG + chr4_1:85264760-85264779 None:intergenic 40.0%
TGTGCTGTCTTGCCAATATA+AGG + chr4_1:85264782-85264801 None:intergenic 40.0%
! TCAGGGGAATTGTTAGCTTC+TGG - chr4_1:85259982-85260001 Msa0580200:CDS 45.0%
AAGAACCTTCCATGTTTGGC+CGG + chr4_1:85260173-85260192 None:intergenic 45.0%
TGTCAAGGACATTATGGACC+TGG - chr4_1:85260863-85260882 Msa0580200:intron 45.0%
AGGAACTAACCTTCAGACGT+TGG - chr4_1:85261067-85261086 Msa0580200:intron 45.0%
TACCCATGCACACTATGTTC+AGG - chr4_1:85261091-85261110 Msa0580200:intron 45.0%
ACCCATGCACACTATGTTCA+GGG - chr4_1:85261092-85261111 Msa0580200:intron 45.0%
!! AGATTAGCTTGGTCTCCAGA+TGG - chr4_1:85261420-85261439 Msa0580200:intron 45.0%
TCATTTCTACTTGTGCCTGC+AGG - chr4_1:85261444-85261463 Msa0580200:intron 45.0%
!! GGAGAAAGTACTCTCTGGTT+AGG + chr4_1:85261670-85261689 None:intergenic 45.0%
GGGGGAAATTAAAAGCTGTC+TGG + chr4_1:85261957-85261976 None:intergenic 45.0%
CCATGTAGCAAAAGCTAAGC+AGG + chr4_1:85262070-85262089 None:intergenic 45.0%
!! CCTGCTTAGCTTTTGCTACA+TGG - chr4_1:85262067-85262086 Msa0580200:intron 45.0%
TTCACGTCTCTACCCATTTC+AGG - chr4_1:85262109-85262128 Msa0580200:CDS 45.0%
TATAGCAGGCCTGCATATCA+AGG + chr4_1:85262359-85262378 None:intergenic 45.0%
ACAACAGCTTTGCTTGCACA+CGG + chr4_1:85262388-85262407 None:intergenic 45.0%
TGAATTGCTTGAGTGGGATG+TGG - chr4_1:85262517-85262536 Msa0580200:intron 45.0%
CATCATGGACCAGTTTGACT+GGG - chr4_1:85262582-85262601 Msa0580200:intron 45.0%
AAATAGGCATGCTGACGAAC+TGG - chr4_1:85262639-85262658 Msa0580200:intron 45.0%
! ACTGGTTCATGTCACAAAGC+CGG - chr4_1:85262657-85262676 Msa0580200:intron 45.0%
GAGGTCTAACAATTCTTCGC+CGG + chr4_1:85262679-85262698 None:intergenic 45.0%
GCCTAGAGGTTCAAAGTGAA+TGG - chr4_1:85262724-85262743 Msa0580200:intron 45.0%
ATGGTCTGAACCAGTTAGAC+AGG - chr4_1:85262743-85262762 Msa0580200:intron 45.0%
GTTATCGCAGGACAGAGAAT+GGG + chr4_1:85262952-85262971 None:intergenic 45.0%
AGTTATCGCAGGACAGAGAA+TGG + chr4_1:85262953-85262972 None:intergenic 45.0%
GAGTGGATCTCCGATAAAAC+GGG + chr4_1:85263150-85263169 None:intergenic 45.0%
GGAGTGGATCTCCGATAAAA+CGG + chr4_1:85263151-85263170 None:intergenic 45.0%
AGGTCCCACTATATTAGGAG+TGG + chr4_1:85263167-85263186 None:intergenic 45.0%
!! ACGAATCATCGACTTGATCG+GGG + chr4_1:85263315-85263334 None:intergenic 45.0%
! GACAATGCATCCTCTGAAAG+AGG + chr4_1:85263389-85263408 None:intergenic 45.0%
CTGTTACTGGAGCATAGTGA+AGG + chr4_1:85263553-85263572 None:intergenic 45.0%
TTAGCATTCTCCTCGCAAGA+TGG - chr4_1:85263698-85263717 Msa0580200:intron 45.0%
GCAAGATGGTTTCTGCTCTT+TGG - chr4_1:85263712-85263731 Msa0580200:intron 45.0%
AGATGGTTTCTGCTCTTTGG+TGG - chr4_1:85263715-85263734 Msa0580200:intron 45.0%
! AGCATCATTGGCTGTCTGAA+GGG + chr4_1:85263894-85263913 None:intergenic 45.0%
AGTTGGCAGTACAGCATCAT+TGG + chr4_1:85263906-85263925 None:intergenic 45.0%
AATGATGCTGTACTGCCAAC+TGG - chr4_1:85263905-85263924 Msa0580200:intron 45.0%
ATGATGCTGTACTGCCAACT+GGG - chr4_1:85263906-85263925 Msa0580200:intron 45.0%
!! CATGGACATAGAAGCATCTG+CGG - chr4_1:85263988-85264007 Msa0580200:intron 45.0%
!! AGAAGCATCTGCGGATATTG+GGG - chr4_1:85263997-85264016 Msa0580200:intron 45.0%
!! TAATTCTGGAGCCGAAGAGA+AGG - chr4_1:85264318-85264337 Msa0580200:intron 45.0%
TTGTTTCGACGCCTTCTCTT+CGG + chr4_1:85264332-85264351 None:intergenic 45.0%
! ATGCTGTCCGAAGTTGATTG+TGG + chr4_1:85264406-85264425 None:intergenic 45.0%
!! CTGGCTGGCTTATTTGTGAT+GGG + chr4_1:85264484-85264503 None:intergenic 45.0%
AATAGGTGTAATGCGCTTCC+TGG + chr4_1:85264503-85264522 None:intergenic 45.0%
AAAACAGGGAGCAACAAGAG+GGG + chr4_1:85264619-85264638 None:intergenic 45.0%
CAAAACAGGGAGCAACAAGA+GGG + chr4_1:85264620-85264639 None:intergenic 45.0%
GAAAGGGAATTTGGCGCTCT+TGG + chr4_1:85259440-85259459 None:intergenic 50.0%
AGGACATTATGGACCTGGAG+TGG - chr4_1:85260868-85260887 Msa0580200:intron 50.0%
CATGGGTATCCAACGTCTGA+AGG + chr4_1:85261079-85261098 None:intergenic 50.0%
CCCCTGAACATAGTGTGCAT+GGG + chr4_1:85261096-85261115 None:intergenic 50.0%
CCCATGCACACTATGTTCAG+GGG - chr4_1:85261093-85261112 Msa0580200:intron 50.0%
CCATGCACACTATGTTCAGG+GGG - chr4_1:85261094-85261113 Msa0580200:intron 50.0%
ATACTTCCCTAAAGGGTCCC+AGG + chr4_1:85261123-85261142 None:intergenic 50.0%
CTGGTTAGGTGAATACCTGC+AGG + chr4_1:85261462-85261481 None:intergenic 50.0%
TCACAGGAAAGTGGACGAAG+TGG - chr4_1:85261877-85261896 Msa0580200:CDS 50.0%
CCAGTCAAACTGGTCCATGA+TGG + chr4_1:85262584-85262603 None:intergenic 50.0%
CCATCATGGACCAGTTTGAC+TGG - chr4_1:85262581-85262600 Msa0580200:intron 50.0%
AGTGCTAGCAACACTCACTC+TGG - chr4_1:85263057-85263076 Msa0580200:CDS 50.0%
!! ATCGACTTGATCGGGGTACA+AGG + chr4_1:85263308-85263327 None:intergenic 50.0%
AGAGCAGAAACCATCTTGCG+AGG + chr4_1:85263711-85263730 None:intergenic 50.0%
! CAGCATCATTGGCTGTCTGA+AGG + chr4_1:85263895-85263914 None:intergenic 50.0%
! TCTGAGGCAGCACAAAAGAC+AGG - chr4_1:85264430-85264449 Msa0580200:CDS 50.0%
CTGAGGCAGCACAAAAGACA+GGG - chr4_1:85264431-85264450 Msa0580200:CDS 50.0%
!! CCTGGCTGGCTTATTTGTGA+TGG + chr4_1:85264485-85264504 None:intergenic 50.0%
CCATCACAAATAAGCCAGCC+AGG - chr4_1:85264482-85264501 Msa0580200:CDS 50.0%
GGACGTTAATGGAGCTTCTC+TGG + chr4_1:85264551-85264570 None:intergenic 50.0%
! CAACAAGAGGGGGGATGTTT+TGG + chr4_1:85264608-85264627 None:intergenic 50.0%
AAACAGGGAGCAACAAGAGG+GGG + chr4_1:85264618-85264637 None:intergenic 50.0%
CCAAAACAGGGAGCAACAAG+AGG + chr4_1:85264621-85264640 None:intergenic 50.0%
! CCTCTTGTTGCTCCCTGTTT+TGG - chr4_1:85264618-85264637 Msa0580200:intron 50.0%
CTTGATGTCGAAATCGGCGC+CGG + chr4_1:85259647-85259666 None:intergenic 55.0%
CAACGGATACCGGCCAAACA+TGG - chr4_1:85260161-85260180 Msa0580200:CDS 55.0%
GGATACCGGCCAAACATGGA+AGG - chr4_1:85260165-85260184 Msa0580200:CDS 55.0%
GACCTGGAGTGGTCTACTGA+TGG - chr4_1:85260879-85260898 Msa0580200:intron 55.0%
CACCATCAGTAGACCACTCC+AGG + chr4_1:85260884-85260903 None:intergenic 55.0%
CTGGAGTGGTCTACTGATGG+TGG - chr4_1:85260882-85260901 Msa0580200:intron 55.0%
CCCCCTGAACATAGTGTGCA+TGG + chr4_1:85261097-85261116 None:intergenic 55.0%
ACTATGTTCAGGGGGTAGCC+TGG - chr4_1:85261102-85261121 Msa0580200:intron 55.0%
CTATGTTCAGGGGGTAGCCT+GGG - chr4_1:85261103-85261122 Msa0580200:intron 55.0%
GCACACGGAAGCTGTATAGC+AGG + chr4_1:85262373-85262392 None:intergenic 55.0%
TGTCCAGCTCCCAGTCAAAC+TGG + chr4_1:85262594-85262613 None:intergenic 55.0%
GATTGTGAGAGGCAGCCTAG+AGG - chr4_1:85262710-85262729 Msa0580200:intron 55.0%
! GTACTGCCAACTGGGAGTGT+TGG - chr4_1:85263914-85263933 Msa0580200:intron 55.0%
ACTGCACCAACACTCCCAGT+TGG + chr4_1:85263923-85263942 None:intergenic 55.0%
GATGGGCGTGCTCTTTGAAC+TGG + chr4_1:85264467-85264486 None:intergenic 55.0%
TGTACACGGGCGGACGTTAA+TGG + chr4_1:85264562-85264581 None:intergenic 55.0%
AACAGGGAGCAACAAGAGGG+GGG + chr4_1:85264617-85264636 None:intergenic 55.0%
!! CGGCGCCGATTTCGACATCA+AGG - chr4_1:85259645-85259664 Msa0580200:three_prime_UTR 60.0%
GGGTAGCCTGGGACCCTTTA+GGG - chr4_1:85261114-85261133 Msa0580200:intron 60.0%
GGACCAGTTTGACTGGGAGC+TGG - chr4_1:85262588-85262607 Msa0580200:intron 60.0%
CTGGGAGCTGGACACATGTC+TGG - chr4_1:85262600-85262619 Msa0580200:intron 60.0%
GGTGTAATGCGCTTCCTGGC+TGG + chr4_1:85264499-85264518 None:intergenic 60.0%
GTGGCGAGAGTGGAGGAGAG+AGG + chr4_1:85259622-85259641 None:intergenic 65.0%
! GATGTCGAAATCGGCGCCGG+CGG + chr4_1:85259644-85259663 None:intergenic 65.0%
GGGGTAGCCTGGGACCCTTT+AGG - chr4_1:85261113-85261132 Msa0580200:intron 65.0%
TCCTCCACTCTCGCCACCGC+CGG - chr4_1:85259625-85259644 Msa0580200:three_prime_UTR 70.0%
!! GTCGAAATCGGCGCCGGCGG+TGG + chr4_1:85259641-85259660 None:intergenic 75.0%
! GCCGGCGGTGGCGAGAGTGG+AGG + chr4_1:85259629-85259648 None:intergenic 80.0%
!!! GGCGCCGGCGGTGGCGAGAG+TGG + chr4_1:85259632-85259651 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 85259436 85264857 85259436 ID=Msa0580200;Name=Msa0580200
chr4_1 mRNA 85259436 85264857 85259436 ID=Msa0580200-mRNA-1;Parent=Msa0580200;Name=Msa0580200-mRNA-1;_AED=0.17;_eAED=0.17;_QI=117|1|1|1|1|1|12|320|605
chr4_1 exon 85259436 85260432 85259436 ID=Msa0580200-mRNA-1:exon:31251;Parent=Msa0580200-mRNA-1
chr4_1 exon 85260514 85260614 85260514 ID=Msa0580200-mRNA-1:exon:31250;Parent=Msa0580200-mRNA-1
chr4_1 exon 85260711 85260849 85260711 ID=Msa0580200-mRNA-1:exon:31249;Parent=Msa0580200-mRNA-1
chr4_1 exon 85261836 85261924 85261836 ID=Msa0580200-mRNA-1:exon:31248;Parent=Msa0580200-mRNA-1
chr4_1 exon 85262090 85262162 85262090 ID=Msa0580200-mRNA-1:exon:31247;Parent=Msa0580200-mRNA-1
chr4_1 exon 85262828 85262924 85262828 ID=Msa0580200-mRNA-1:exon:31246;Parent=Msa0580200-mRNA-1
chr4_1 exon 85263013 85263224 85263013 ID=Msa0580200-mRNA-1:exon:31245;Parent=Msa0580200-mRNA-1
chr4_1 exon 85263333 85263436 85263333 ID=Msa0580200-mRNA-1:exon:31244;Parent=Msa0580200-mRNA-1
chr4_1 exon 85264090 85264162 85264090 ID=Msa0580200-mRNA-1:exon:31243;Parent=Msa0580200-mRNA-1
chr4_1 exon 85264281 85264307 85264281 ID=Msa0580200-mRNA-1:exon:31242;Parent=Msa0580200-mRNA-1
chr4_1 exon 85264415 85264526 85264415 ID=Msa0580200-mRNA-1:exon:31241;Parent=Msa0580200-mRNA-1
chr4_1 exon 85264627 85264857 85264627 ID=Msa0580200-mRNA-1:exon:31240;Parent=Msa0580200-mRNA-1
chr4_1 five_prime_UTR 85264741 85264857 85264741 ID=Msa0580200-mRNA-1:five_prime_utr;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85264627 85264740 85264627 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85264415 85264526 85264415 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85264281 85264307 85264281 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85264090 85264162 85264090 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85263333 85263436 85263333 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85263013 85263224 85263013 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85262828 85262924 85262828 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85262090 85262162 85262090 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85261836 85261924 85261836 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85260711 85260849 85260711 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85260514 85260614 85260514 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 CDS 85259756 85260432 85259756 ID=Msa0580200-mRNA-1:cds;Parent=Msa0580200-mRNA-1
chr4_1 three_prime_UTR 85259436 85259755 85259436 ID=Msa0580200-mRNA-1:three_prime_utr;Parent=Msa0580200-mRNA-1
Gene Sequence

>Msa0580200

ATGAAAGGTGGAACGGTTCAGATTAATTGGCACGAGAGCAAACCCGTTTTGACCCTAGATTTTCATCCTCTCTCCTCCACTCTCGCCACCGCCGGCGCCGATTTCGACATCAAGTTATGGTCAGTTAAACCTTCTGGATCACAAAAGAAGCTTCCAGTAGTTACTTATGTCAATAGTCTCTCGTATCATAGCTCTGCTGTTAATGTTATTCGCTTCTCTTCTTCCGGGGAATTGTTAGCTTCTGGTTCTGATGGAGGTGAATTGTTAATATGGAAGCTACATTCAACGGATACCGGCCAAACATGGAAGGTTCTTAAGATGTTACGATCTCATGTCAAGGACATTATGGACCTGGAGTGGTCTACTGATGGTGGATATATCATATCCGGATCAGTTGATAATTCTTGCATTATATGGGATGTTAACAAAGGAACTAACCTTCAGACGTTGGATACCCATGCACACTATGTTCAGGGGGTAGCCTGGGACCCTTTAGGGAAGTATATTGCTTCTCTTAGTTCTGACCGGACTTGCCGAATTTACATCAGTAAGCCCCATAAATCAAAGGGTGTTGAGAGAATCAATTACGCTTGCAAGCATGTTATTTCTAAGGCAGAACAGCCATTATTAAAGAATTCCAAGTCGACAAAATATCATCTCTTCCATGATGAAACATTGCCCTCTTTCTTTAGAAGATTAGCTTGGTCTCCAGATGGTTCATTTCTACTTGTGCCTGCAGGTTCTTACAAAATCGGTACAGCGTCTGAATCTGTAAATGCAGCTTACATATTTTCTAGAAAAGATCTTTCTCGGCCTGCTATACAGCTTCCGTGTGCAAGCAAAGCTGTTGTAGCTGTTCGATTCTGTCCTGTATTATTTAAGCTTAAGGGAACAAATTCAGATGGGTTATTTAAGCTCCCATATCGCATTGTATTTGCCGTGGCCACATTGAATTCATTGTACATTTATGACACTGAGAACACTTCTCCAATAGCAATATTTGCTGGCCTTCACTATGCTCCAGTAACAGATATTACCTGGTCACCTGATGCCCATTATTTAGCATTCTCCTCGCAAGATGGTTTCTGCTCTTTGGTGGAGTTCGAAAATGACGAACTTGGATCACCTTACTGCTTATCAAAAGAAAATGTCTTGGAGGACAGTAAAAGCACCCTTCAGACAGCCAATGATGCTGTACTGCCAACTGGGAGTGTTGGTGCAGTTGTAGCAGAAAGCATGAAAATGGAAGTGGAAGAAAAGGTTGATGACATGGACATAGAAGCATCTGCGGATATTGGGGCAGTCACATCAGAAAGCAGCAAAACTGTAATACAAGATAAGGCTGATGACGTGATCATCAAATCAACTGGGAATGTTGGTGCAATTATAGCTGACAATAGGAAAAATGAAGCAGAACATAAAGCTGATGATATGGTCATTGAAGAAGTTACGGCAGATATTAGGAAAAATGAAGCAGAGGAGAAGGCTGCTGACATGATCATTGAGACAACTAGGACTGCAAATATTGGAGCAGCTCTATTAGATAATAGAAAAACCGAAGACACAGAAAATAAACCGCTTAGTGGTTTAGGCAGTATTAATTCTGGAGCCGAAGAGAAGGCGTCGAAACAACCAGCTAATCCAGATGGTAAACAAAGTGAAGCAGAAGAGAAGGCAGATAAACCACAATCAACTTCGGACAGCATAAAATCTGAGGCAGCACAAAAGACAGGGAATCAATCGTCCAGTTCAAAGAGCACGCCCATCACAAATAAGCCAGCCAGGAAGCGCATTACACCTATTGCAATTGATCCATGA
Protein sequence

>Msa0580200

MKGGTVQINWHESKPVLTLDFHPLSSTLATAGADFDIKLWSVKPSGSQKKLPVVTYVNSLSYHSSAVNVIRFSSSGELLASGSDGGELLIWKLHSTDTGQTWKVLKMLRSHVKDIMDLEWSTDGGYIISGSVDNSCIIWDVNKGTNLQTLDTHAHYVQGVAWDPLGKYIASLSSDRTCRIYISKPHKSKGVERINYACKHVISKAEQPLLKNSKSTKYHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKIGTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPVLFKLKGTNSDGLFKLPYRIVFAVATLNSLYIYDTENTSPIAIFAGLHYAPVTDITWSPDAHYLAFSSQDGFCSLVEFENDELGSPYCLSKENVLEDSKSTLQTANDAVLPTGSVGAVVAESMKMEVEEKVDDMDIEASADIGAVTSESSKTVIQDKADDVIIKSTGNVGAIIADNRKNEAEHKADDMVIEEVTADIRKNEAEEKAADMIIETTRTANIGAALLDNRKTEDTENKPLSGLGSINSGAEEKASKQPANPDGKQSEAEEKADKPQSTSDSIKSEAAQKTGNQSSSSKSTPITNKPARKRITPIAIDP*