Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0002580 | XP_003610042.1 | 97.689 | 822 | 17 | 1 | 1 | 822 | 1 | 820 | 0.0 | 1643 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0002580 | sp|Q9SZR3|SMXL4_ARATH | 37.869 | 610 | 317 | 21 | 247 | 819 | 431 | 1015 | 1.04e-94 | 322 |
Msa0002580 | sp|Q9SZR3|SMXL4_ARATH | 58.506 | 241 | 73 | 7 | 1 | 218 | 1 | 237 | 5.18e-60 | 224 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000050 | Msa0002580 | 0.895440 | 9.563409e-76 | -8.615850e-47 |
Msa0001940 | Msa0002580 | 0.855245 | 7.180881e-62 | -8.615850e-47 |
Msa0001960 | Msa0002580 | 0.820769 | 5.757465e-53 | -8.615850e-47 |
Msa0002580 | Msa0005890 | 0.842119 | 3.142016e-58 | -8.615850e-47 |
Msa0002580 | Msa0017670 | 0.858814 | 6.363003e-63 | -8.615850e-47 |
Msa0002580 | Msa0017930 | 0.835609 | 1.519123e-56 | -8.615850e-47 |
Msa0002580 | Msa0017950 | 0.849945 | 2.334766e-60 | -8.615850e-47 |
Msa0002580 | Msa0018160 | 0.811855 | 5.680332e-51 | -8.615850e-47 |
Msa0002580 | Msa0024000 | 0.847353 | 1.219989e-59 | -8.615850e-47 |
Msa0002580 | Msa0025580 | 0.808090 | 3.674717e-50 | -8.615850e-47 |
Msa0002580 | Msa0027280 | 0.813152 | 2.958567e-51 | -8.615850e-47 |
Msa0002580 | Msa0027820 | 0.811419 | 7.067714e-51 | -8.615850e-47 |
Msa0002580 | Msa0030390 | 0.810847 | 9.402572e-51 | -8.615850e-47 |
Msa0002580 | Msa0034210 | 0.815001 | 1.155821e-51 | -8.615850e-47 |
Msa0002580 | Msa0034810 | 0.882023 | 1.474029e-70 | -8.615850e-47 |
Msa0002580 | Msa0035060 | 0.828201 | 1.025423e-54 | -8.615850e-47 |
Msa0002580 | Msa0035340 | 0.803011 | 4.273080e-49 | -8.615850e-47 |
Msa0002580 | Msa0036870 | 0.835721 | 1.423135e-56 | -8.615850e-47 |
Msa0002580 | Msa0042640 | 0.852222 | 5.317852e-61 | -8.615850e-47 |
Msa0002580 | Msa0048510 | 0.830531 | 2.787464e-55 | -8.615850e-47 |
Msa0002580 | Msa0050660 | 0.836601 | 8.502598e-57 | -8.615850e-47 |
Msa0002580 | Msa0050700 | 0.836994 | 6.753402e-57 | -8.615850e-47 |
Msa0002580 | Msa0050790 | 0.849288 | 3.560547e-60 | -8.615850e-47 |
Msa0002580 | Msa0052260 | 0.800506 | 1.395698e-48 | -8.615850e-47 |
Msa0002580 | Msa0054690 | 0.811738 | 6.023560e-51 | -8.615850e-47 |
Msa0002580 | Msa0071850 | 0.807233 | 5.585371e-50 | -8.615850e-47 |
Msa0002580 | Msa0071860 | 0.827759 | 1.310051e-54 | -8.615850e-47 |
Msa0002580 | Msa0071880 | 0.819568 | 1.085016e-52 | -8.615850e-47 |
Msa0002580 | Msa0074350 | 0.803923 | 2.764217e-49 | -8.615850e-47 |
Msa0002580 | Msa0074600 | 0.814219 | 1.722368e-51 | -8.615850e-47 |
Msa0002580 | Msa0077340 | 0.864457 | 1.199857e-64 | -8.615850e-47 |
Msa0002580 | Msa0077560 | 0.813521 | 2.453939e-51 | -8.615850e-47 |
Msa0002580 | Msa0081020 | 0.812272 | 4.607832e-51 | -8.615850e-47 |
Msa0002580 | Msa0081090 | 0.809859 | 1.536493e-50 | -8.615850e-47 |
Msa0002580 | Msa0081390 | 0.814860 | 1.242553e-51 | -8.615850e-47 |
Msa0002580 | Msa0081450 | 0.814687 | 1.356799e-51 | -8.615850e-47 |
Msa0002580 | Msa0081980 | 0.828431 | 9.024260e-55 | -8.615850e-47 |
Msa0002580 | Msa0082020 | 0.807345 | 5.290537e-50 | -8.615850e-47 |
Msa0002580 | Msa0089460 | 0.805353 | 1.390806e-49 | -8.615850e-47 |
Msa0002580 | Msa0090400 | 0.838811 | 2.303745e-57 | -8.615850e-47 |
Msa0002580 | Msa0094780 | 0.859222 | 4.801737e-63 | -8.615850e-47 |
Msa0002580 | Msa0094790 | 0.803596 | 3.231991e-49 | -8.615850e-47 |
Msa0002580 | Msa0097770 | 0.800082 | 1.702718e-48 | -8.615850e-47 |
Msa0002580 | Msa0098040 | 0.863204 | 2.941458e-64 | -8.615850e-47 |
Msa0002580 | Msa0108410 | 0.812934 | 3.302429e-51 | -8.615850e-47 |
Msa0002580 | Msa0108880 | 0.823745 | 1.173613e-53 | -8.615850e-47 |
Msa0002580 | Msa0117480 | 0.819494 | 1.128015e-52 | -8.615850e-47 |
Msa0002580 | Msa0119830 | 0.847764 | 9.408068e-60 | -8.615850e-47 |
Msa0002580 | Msa0121330 | 0.821225 | 4.520546e-53 | -8.615850e-47 |
Msa0002580 | Msa0125360 | 0.840329 | 9.282145e-58 | -8.615850e-47 |
Msa0002580 | Msa0126040 | 0.800565 | 1.357944e-48 | -8.615850e-47 |
Msa0002580 | Msa0128310 | 0.827927 | 1.193492e-54 | -8.615850e-47 |
Msa0002580 | Msa0128460 | 0.803873 | 2.831417e-49 | -8.615850e-47 |
Msa0002580 | Msa0129940 | 0.845949 | 2.951329e-59 | -8.615850e-47 |
Msa0002580 | Msa0131900 | 0.809016 | 2.330483e-50 | -8.615850e-47 |
Msa0002580 | Msa0136650 | 0.824320 | 8.605557e-54 | -8.615850e-47 |
Msa0002580 | Msa0137880 | 0.820003 | 8.630034e-53 | -8.615850e-47 |
Msa0002580 | Msa0140130 | 0.800915 | 1.151691e-48 | -8.615850e-47 |
Msa0002580 | Msa0140280 | 0.820927 | 5.295782e-53 | -8.615850e-47 |
Msa0002580 | Msa0146040 | 0.813150 | 2.960341e-51 | -8.615850e-47 |
Msa0002580 | Msa0163110 | 0.839307 | 1.714115e-57 | -8.615850e-47 |
Msa0002580 | Msa0172650 | 0.806331 | 8.665671e-50 | -8.615850e-47 |
Msa0002580 | Msa0173690 | 0.833429 | 5.360166e-56 | -8.615850e-47 |
Msa0002580 | Msa0173750 | 0.829927 | 3.914310e-55 | -8.615850e-47 |
Msa0002580 | Msa0173840 | 0.828866 | 7.082573e-55 | -8.615850e-47 |
Msa0002580 | Msa0174290 | 0.826463 | 2.675584e-54 | -8.615850e-47 |
Msa0002580 | Msa0174440 | 0.817821 | 2.702400e-52 | -8.615850e-47 |
Msa0002580 | Msa0174450 | 0.858691 | 6.924596e-63 | -8.615850e-47 |
Msa0002580 | Msa0175730 | 0.859002 | 5.589768e-63 | -8.615850e-47 |
Msa0002580 | Msa0175750 | 0.801293 | 9.639638e-49 | -8.615850e-47 |
Msa0002580 | Msa0186010 | 0.801698 | 7.963105e-49 | -8.615850e-47 |
Msa0002580 | Msa0188610 | 0.866107 | 3.631087e-65 | -8.615850e-47 |
Msa0002580 | Msa0190570 | 0.825808 | 3.830182e-54 | -8.615850e-47 |
Msa0002580 | Msa0200050 | 0.819914 | 9.041434e-53 | -8.615850e-47 |
Msa0002580 | Msa0211030 | 0.806177 | 9.336284e-50 | -8.615850e-47 |
Msa0002580 | Msa0213030 | 0.834093 | 3.658631e-56 | -8.615850e-47 |
Msa0002580 | Msa0221000 | 0.833617 | 4.813036e-56 | -8.615850e-47 |
Msa0002580 | Msa0225100 | 0.860290 | 2.289596e-63 | -8.615850e-47 |
Msa0002580 | Msa0225860 | 0.864057 | 1.598875e-64 | -8.615850e-47 |
Msa0002580 | Msa0230800 | 0.872487 | 3.063347e-67 | -8.615850e-47 |
Msa0002580 | Msa0230870 | 0.838690 | 2.475885e-57 | -8.615850e-47 |
Msa0002580 | Msa0231200 | 0.806809 | 6.868143e-50 | -8.615850e-47 |
Msa0002580 | Msa0233320 | 0.802704 | 4.943802e-49 | -8.615850e-47 |
Msa0002580 | Msa0240900 | 0.814240 | 1.703727e-51 | -8.615850e-47 |
Msa0002580 | Msa0242590 | 0.849522 | 3.064045e-60 | -8.615850e-47 |
Msa0002580 | Msa0244640 | 0.893085 | 8.723338e-75 | -8.615850e-47 |
Msa0002580 | Msa0251620 | 0.804084 | 2.560080e-49 | -8.615850e-47 |
Msa0002580 | Msa0251710 | 0.806997 | 6.267141e-50 | -8.615850e-47 |
Msa0002580 | Msa0260510 | 0.830540 | 2.772294e-55 | -8.615850e-47 |
Msa0002580 | Msa0265850 | 0.816242 | 6.116667e-52 | -8.615850e-47 |
Msa0002580 | Msa0266180 | 0.865723 | 4.801847e-65 | -8.615850e-47 |
Msa0002580 | Msa0267110 | 0.819929 | 8.969341e-53 | -8.615850e-47 |
Msa0002580 | Msa0270340 | 0.860563 | 1.893352e-63 | -8.615850e-47 |
Msa0002580 | Msa0279690 | 0.820374 | 7.095757e-53 | -8.615850e-47 |
Msa0002580 | Msa0280790 | 0.838856 | 2.242786e-57 | -8.615850e-47 |
Msa0002580 | Msa0281350 | 0.803338 | 3.656473e-49 | -8.615850e-47 |
Msa0002580 | Msa0281390 | 0.803922 | 2.766301e-49 | -8.615850e-47 |
Msa0002580 | Msa0283330 | 0.886083 | 4.655407e-72 | -8.615850e-47 |
Msa0002580 | Msa0287740 | 0.867524 | 1.284572e-65 | -8.615850e-47 |
Msa0002580 | Msa0290720 | 0.808620 | 2.831343e-50 | -8.615850e-47 |
Msa0002580 | Msa0292160 | 0.824022 | 1.011045e-53 | -8.615850e-47 |
Msa0002580 | Msa0298470 | 0.864041 | 1.616772e-64 | -8.615850e-47 |
Msa0002580 | Msa0300270 | 0.837035 | 6.589665e-57 | -8.615850e-47 |
Msa0002580 | Msa0300320 | 0.819605 | 1.063744e-52 | -8.615850e-47 |
Msa0002580 | Msa0307270 | 0.841873 | 3.649274e-58 | -8.615850e-47 |
Msa0002580 | Msa0307670 | 0.857354 | 1.728036e-62 | -8.615850e-47 |
Msa0002580 | Msa0321620 | 0.888409 | 6.057164e-73 | -8.615850e-47 |
Msa0002580 | Msa0323270 | 0.810890 | 9.203582e-51 | -8.615850e-47 |
Msa0002580 | Msa0330380 | 0.802071 | 6.675187e-49 | -8.615850e-47 |
Msa0002580 | Msa0337700 | 0.848420 | 6.199540e-60 | -8.615850e-47 |
Msa0002580 | Msa0338340 | 0.801584 | 8.402662e-49 | -8.615850e-47 |
Msa0002580 | Msa0340500 | 0.819777 | 9.716686e-53 | -8.615850e-47 |
Msa0002580 | Msa0359020 | 0.818068 | 2.377632e-52 | -8.615850e-47 |
Msa0002580 | Msa0360210 | 0.801323 | 9.505063e-49 | -8.615850e-47 |
Msa0002580 | Msa0361910 | 0.815979 | 7.003666e-52 | -8.615850e-47 |
Msa0002580 | Msa0367690 | 0.827094 | 1.891096e-54 | -8.615850e-47 |
Msa0002580 | Msa0369790 | 0.847443 | 1.152948e-59 | -8.615850e-47 |
Msa0002580 | Msa0371270 | 0.808971 | 2.383163e-50 | -8.615850e-47 |
Msa0002580 | Msa0376630 | 0.803266 | 3.783905e-49 | -8.615850e-47 |
Msa0002580 | Msa0378720 | 0.850927 | 1.237340e-60 | -8.615850e-47 |
Msa0002580 | Msa0380620 | 0.823022 | 1.732185e-53 | -8.615850e-47 |
Msa0002580 | Msa0380670 | 0.816659 | 4.933762e-52 | -8.615850e-47 |
Msa0002580 | Msa0403640 | 0.813467 | 2.522639e-51 | -8.615850e-47 |
Msa0002580 | Msa0405680 | 0.842284 | 2.841205e-58 | -8.615850e-47 |
Msa0002580 | Msa0418970 | 0.802863 | 4.584697e-49 | -8.615850e-47 |
Msa0002580 | Msa0419540 | 0.817468 | 3.246486e-52 | -8.615850e-47 |
Msa0002580 | Msa0425170 | 0.823774 | 1.155851e-53 | -8.615850e-47 |
Msa0002580 | Msa0428370 | 0.871074 | 9.012929e-67 | -8.615850e-47 |
Msa0002580 | Msa0428920 | 0.837958 | 3.823601e-57 | -8.615850e-47 |
Msa0002580 | Msa0430260 | 0.831034 | 2.098303e-55 | -8.615850e-47 |
Msa0002580 | Msa0430300 | 0.822626 | 2.141944e-53 | -8.615850e-47 |
Msa0002580 | Msa0432140 | 0.816091 | 6.610135e-52 | -8.615850e-47 |
Msa0002580 | Msa0434290 | 0.815227 | 1.029719e-51 | -8.615850e-47 |
Msa0002580 | Msa0435210 | 0.806466 | 8.115714e-50 | -8.615850e-47 |
Msa0002580 | Msa0436910 | 0.990503 | 6.082831e-183 | -8.615850e-47 |
Msa0002580 | Msa0464000 | 0.845265 | 4.522712e-59 | -8.615850e-47 |
Msa0002580 | Msa0465400 | 0.811147 | 8.096502e-51 | -8.615850e-47 |
Msa0002580 | Msa0465530 | 0.836198 | 1.077235e-56 | -8.615850e-47 |
Msa0002580 | Msa0472950 | 0.839432 | 1.590302e-57 | -8.615850e-47 |
Msa0002580 | Msa0474730 | 0.872195 | 3.832313e-67 | -8.615850e-47 |
Msa0002580 | Msa0476650 | 0.809494 | 1.840733e-50 | -8.615850e-47 |
Msa0002580 | Msa0483100 | 0.829849 | 4.087976e-55 | -8.615850e-47 |
Msa0002580 | Msa0491150 | 0.806332 | 8.659816e-50 | -8.615850e-47 |
Msa0002580 | Msa0500380 | 0.821131 | 4.752197e-53 | -8.615850e-47 |
Msa0002580 | Msa0509550 | 0.834452 | 2.973248e-56 | -8.615850e-47 |
Msa0002580 | Msa0517250 | 0.839773 | 1.296758e-57 | -8.615850e-47 |
Msa0002580 | Msa0519750 | 0.878546 | 2.572635e-69 | -8.615850e-47 |
Msa0002580 | Msa0519820 | 0.874747 | 5.301745e-68 | -8.615850e-47 |
Msa0002580 | Msa0519830 | 0.877209 | 7.551635e-69 | -8.615850e-47 |
Msa0002580 | Msa0520990 | 0.819128 | 1.366567e-52 | -8.615850e-47 |
Msa0002580 | Msa0528570 | 0.857529 | 1.533566e-62 | -8.615850e-47 |
Msa0002580 | Msa0529030 | 0.884635 | 1.620810e-71 | -8.615850e-47 |
Msa0002580 | Msa0530780 | 0.839436 | 1.586712e-57 | -8.615850e-47 |
Msa0002580 | Msa0534720 | 0.831612 | 1.512415e-55 | -8.615850e-47 |
Msa0002580 | Msa0541300 | 0.830890 | 2.276032e-55 | -8.615850e-47 |
Msa0002580 | Msa0541310 | 0.825800 | 3.846291e-54 | -8.615850e-47 |
Msa0002580 | Msa0548470 | 0.825598 | 4.295082e-54 | -8.615850e-47 |
Msa0002580 | Msa0556640 | 0.829445 | 5.126811e-55 | -8.615850e-47 |
Msa0002580 | Msa0557370 | 0.805724 | 1.162692e-49 | -8.615850e-47 |
Msa0002580 | Msa0557460 | 0.844727 | 6.319048e-59 | -8.615850e-47 |
Msa0002580 | Msa0562290 | 0.802777 | 4.774811e-49 | -8.615850e-47 |
Msa0002580 | Msa0565660 | 0.806842 | 6.758230e-50 | -8.615850e-47 |
Msa0002580 | Msa0567170 | 0.812006 | 5.267929e-51 | -8.615850e-47 |
Msa0002580 | Msa0571290 | 0.822089 | 2.853898e-53 | -8.615850e-47 |
Msa0002580 | Msa0574050 | 0.824369 | 8.379223e-54 | -8.615850e-47 |
Msa0002580 | Msa0580370 | 0.865684 | 4.941275e-65 | -8.615850e-47 |
Msa0002580 | Msa0580810 | 0.800836 | 1.195647e-48 | -8.615850e-47 |
Msa0002580 | Msa0581470 | 0.848647 | 5.363204e-60 | -8.615850e-47 |
Msa0002580 | Msa0583360 | -0.837309 | 5.609528e-57 | -8.615850e-47 |
Msa0002580 | Msa0585020 | 0.833160 | 6.256803e-56 | -8.615850e-47 |
Msa0002580 | Msa0587620 | 0.831915 | 1.272999e-55 | -8.615850e-47 |
Msa0002580 | Msa0588920 | 0.810565 | 1.082292e-50 | -8.615850e-47 |
Msa0002580 | Msa0597270 | 0.849119 | 3.967797e-60 | -8.615850e-47 |
Msa0002580 | Msa0597790 | 0.819198 | 1.317407e-52 | -8.615850e-47 |
Msa0002580 | Msa0600930 | 0.806418 | 8.305988e-50 | -8.615850e-47 |
Msa0002580 | Msa0608330 | 0.810351 | 1.203845e-50 | -8.615850e-47 |
Msa0002580 | Msa0611210 | 0.857437 | 1.633449e-62 | -8.615850e-47 |
Msa0002580 | Msa0612060 | 0.834991 | 2.175362e-56 | -8.615850e-47 |
Msa0002580 | Msa0621710 | 0.803258 | 3.797653e-49 | -8.615850e-47 |
Msa0002580 | Msa0624420 | 0.802457 | 5.560256e-49 | -8.615850e-47 |
Msa0002580 | Msa0624900 | 0.825204 | 5.324379e-54 | -8.615850e-47 |
Msa0002580 | Msa0625650 | 0.800963 | 1.125995e-48 | -8.615850e-47 |
Msa0002580 | Msa0626450 | 0.825747 | 3.959331e-54 | -8.615850e-47 |
Msa0002580 | Msa0626490 | 0.819551 | 1.094629e-52 | -8.615850e-47 |
Msa0002580 | Msa0640200 | 0.802736 | 4.870596e-49 | -8.615850e-47 |
Msa0002580 | Msa0644410 | 0.808537 | 2.949702e-50 | -8.615850e-47 |
Msa0002580 | Msa0651550 | 0.854984 | 8.550416e-62 | -8.615850e-47 |
Msa0002580 | Msa0652170 | 0.819839 | 9.405616e-53 | -8.615850e-47 |
Msa0002580 | Msa0652770 | 0.824435 | 8.086572e-54 | -8.615850e-47 |
Msa0002580 | Msa0657440 | 0.836540 | 8.815619e-57 | -8.615850e-47 |
Msa0002580 | Msa0658640 | 0.801313 | 9.551023e-49 | -8.615850e-47 |
Msa0002580 | Msa0658880 | 0.806232 | 9.089587e-50 | -8.615850e-47 |
Msa0002580 | Msa0662110 | 0.805860 | 1.088668e-49 | -8.615850e-47 |
Msa0002580 | Msa0664120 | 0.805401 | 1.358764e-49 | -8.615850e-47 |
Msa0002580 | Msa0664600 | 0.822525 | 2.261411e-53 | -8.615850e-47 |
Msa0002580 | Msa0666700 | 0.820095 | 8.219748e-53 | -8.615850e-47 |
Msa0002580 | Msa0670100 | 0.801665 | 8.088169e-49 | -8.615850e-47 |
Msa0002580 | Msa0674480 | 0.833500 | 5.145245e-56 | -8.615850e-47 |
Msa0002580 | Msa0675330 | 0.836277 | 1.028022e-56 | -8.615850e-47 |
Msa0002580 | Msa0683490 | 0.809178 | 2.151301e-50 | -8.615850e-47 |
Msa0002580 | Msa0688490 | 0.804886 | 1.742071e-49 | -8.615850e-47 |
Msa0002580 | Msa0693890 | 0.849047 | 4.155111e-60 | -8.615850e-47 |
Msa0002580 | Msa0695270 | 0.811799 | 5.844570e-51 | -8.615850e-47 |
Msa0002580 | Msa0699490 | 0.830655 | 2.599386e-55 | -8.615850e-47 |
Msa0002580 | Msa0700460 | 0.832995 | 6.874247e-56 | -8.615850e-47 |
Msa0002580 | Msa0701700 | 0.827968 | 1.166892e-54 | -8.615850e-47 |
Msa0002580 | Msa0701720 | 0.834944 | 2.236479e-56 | -8.615850e-47 |
Msa0002580 | Msa0704410 | 0.817742 | 2.816902e-52 | -8.615850e-47 |
Msa0002580 | Msa0709630 | 0.806932 | 6.468310e-50 | -8.615850e-47 |
Msa0002580 | Msa0711430 | 0.806981 | 6.317920e-50 | -8.615850e-47 |
Msa0002580 | Msa0717890 | 0.800364 | 1.492236e-48 | -8.615850e-47 |
Msa0002580 | Msa0720410 | 0.816979 | 4.182287e-52 | -8.615850e-47 |
Msa0002580 | Msa0721080 | 0.849025 | 4.213501e-60 | -8.615850e-47 |
Msa0002580 | Msa0725770 | 0.833531 | 5.054398e-56 | -8.615850e-47 |
Msa0002580 | Msa0729270 | 0.815581 | 8.592107e-52 | -8.615850e-47 |
Msa0002580 | Msa0733010 | 0.802529 | 5.373870e-49 | -8.615850e-47 |
Msa0002580 | Msa0734250 | 0.815801 | 7.675404e-52 | -8.615850e-47 |
Msa0002580 | Msa0735780 | 0.823498 | 1.341043e-53 | -8.615850e-47 |
Msa0002580 | Msa0736960 | 0.824023 | 1.010147e-53 | -8.615850e-47 |
Msa0002580 | Msa0738700 | 0.818570 | 1.829512e-52 | -8.615850e-47 |
Msa0002580 | Msa0740710 | 0.811889 | 5.586944e-51 | -8.615850e-47 |
Msa0002580 | Msa0741220 | 0.865373 | 6.190607e-65 | -8.615850e-47 |
Msa0002580 | Msa0741650 | 0.825586 | 4.323861e-54 | -8.615850e-47 |
Msa0002580 | Msa0752450 | 0.813595 | 2.363711e-51 | -8.615850e-47 |
Msa0002580 | Msa0755930 | 0.819006 | 1.456737e-52 | -8.615850e-47 |
Msa0002580 | Msa0756490 | 0.810954 | 8.917223e-51 | -8.615850e-47 |
Msa0002580 | Msa0760970 | 0.809759 | 1.614311e-50 | -8.615850e-47 |
Msa0002580 | Msa0761670 | 0.841721 | 4.001153e-58 | -8.615850e-47 |
Msa0002580 | Msa0766350 | 0.818226 | 2.189652e-52 | -8.615850e-47 |
Msa0002580 | Msa0768990 | 0.809696 | 1.665789e-50 | -8.615850e-47 |
Msa0002580 | Msa0770330 | 0.811392 | 7.165391e-51 | -8.615850e-47 |
Msa0002580 | Msa0773630 | 0.805623 | 1.220758e-49 | -8.615850e-47 |
Msa0002580 | Msa0777750 | 0.801811 | 7.550772e-49 | -8.615850e-47 |
Msa0002580 | Msa0778590 | 0.822020 | 2.962089e-53 | -8.615850e-47 |
Msa0002580 | Msa0780570 | 0.812520 | 4.067297e-51 | -8.615850e-47 |
Msa0002580 | Msa0786370 | 0.802006 | 6.884150e-49 | -8.615850e-47 |
Msa0002580 | Msa0792370 | 0.859309 | 4.522514e-63 | -8.615850e-47 |
Msa0002580 | Msa0795870 | 0.865489 | 5.690731e-65 | -8.615850e-47 |
Msa0002580 | Msa0799970 | 0.810841 | 9.432192e-51 | -8.615850e-47 |
Msa0002580 | Msa0803250 | 0.813066 | 3.089750e-51 | -8.615850e-47 |
Msa0002580 | Msa0805330 | 0.820770 | 5.754784e-53 | -8.615850e-47 |
Msa0002580 | Msa0815960 | 0.801883 | 7.296027e-49 | -8.615850e-47 |
Msa0002580 | Msa0815970 | 0.813117 | 3.009919e-51 | -8.615850e-47 |
Msa0002580 | Msa0819170 | 0.831161 | 1.953161e-55 | -8.615850e-47 |
Msa0002580 | Msa0822730 | 0.843517 | 1.334779e-58 | -8.615850e-47 |
Msa0002580 | Msa0824450 | 0.838604 | 2.605427e-57 | -8.615850e-47 |
Msa0002580 | Msa0829300 | 0.888757 | 4.445522e-73 | -8.615850e-47 |
Msa0002580 | Msa0829330 | 0.893768 | 4.622571e-75 | -8.615850e-47 |
Msa0002580 | Msa0832120 | 0.812845 | 3.453602e-51 | -8.615850e-47 |
Msa0002580 | Msa0833530 | 0.828167 | 1.044900e-54 | -8.615850e-47 |
Msa0002580 | Msa0833650 | 0.867175 | 1.660716e-65 | -8.615850e-47 |
Msa0002580 | Msa0835490 | 0.850416 | 1.722043e-60 | -8.615850e-47 |
Msa0002580 | Msa0841590 | 0.801330 | 9.476236e-49 | -8.615850e-47 |
Msa0002580 | Msa0842680 | 0.801230 | 9.932640e-49 | -8.615850e-47 |
Msa0002580 | Msa0855870 | 0.811148 | 8.094097e-51 | -8.615850e-47 |
Msa0002580 | Msa0859290 | 0.820440 | 6.853562e-53 | -8.615850e-47 |
Msa0002580 | Msa0861510 | 0.800020 | 1.752602e-48 | -8.615850e-47 |
Msa0002580 | Msa0861600 | 0.810566 | 1.081728e-50 | -8.615850e-47 |
Msa0002580 | Msa0861850 | 0.815286 | 9.993886e-52 | -8.615850e-47 |
Msa0002580 | Msa0871880 | 0.808576 | 2.893715e-50 | -8.615850e-47 |
Msa0002580 | Msa0876310 | 0.816778 | 4.640544e-52 | -8.615850e-47 |
Msa0002580 | Msa0894790 | 0.830533 | 2.783997e-55 | -8.615850e-47 |
Msa0002580 | Msa0905240 | 0.817928 | 2.557102e-52 | -8.615850e-47 |
Msa0002580 | Msa0915520 | 0.806749 | 7.071793e-50 | -8.615850e-47 |
Msa0002580 | Msa0921590 | 0.818863 | 1.569856e-52 | -8.615850e-47 |
Msa0002580 | Msa0933760 | 0.806535 | 7.847973e-50 | -8.615850e-47 |
Msa0002580 | Msa0935820 | 0.827317 | 1.672826e-54 | -8.615850e-47 |
Msa0002580 | Msa0945190 | 0.838218 | 3.277593e-57 | -8.615850e-47 |
Msa0002580 | Msa0945550 | 0.807447 | 5.033516e-50 | -8.615850e-47 |
Msa0002580 | Msa0967870 | 0.858066 | 1.063043e-62 | -8.615850e-47 |
Msa0002580 | Msa0974520 | 0.823742 | 1.175521e-53 | -8.615850e-47 |
Msa0002580 | Msa0978950 | 0.801521 | 8.656737e-49 | -8.615850e-47 |
Msa0002580 | Msa1004800 | 0.807951 | 3.931948e-50 | -8.615850e-47 |
Msa0002580 | Msa1009950 | 0.824077 | 9.812166e-54 | -8.615850e-47 |
Msa0002580 | Msa1019430 | 0.802183 | 6.331158e-49 | -8.615850e-47 |
Msa0002580 | Msa1019470 | 0.822804 | 1.947098e-53 | -8.615850e-47 |
Msa0002580 | Msa1020480 | 0.800069 | 1.713282e-48 | -8.615850e-47 |
Msa0002580 | Msa1021590 | 0.833930 | 4.018964e-56 | -8.615850e-47 |
Msa0002580 | Msa1028100 | 0.810606 | 1.060508e-50 | -8.615850e-47 |
Msa0002580 | Msa1028510 | 0.817247 | 3.641348e-52 | -8.615850e-47 |
Msa0002580 | Msa1034500 | 0.808902 | 2.465007e-50 | -8.615850e-47 |
Msa0002580 | Msa1042160 | 0.817500 | 3.193001e-52 | -8.615850e-47 |
Msa0002580 | Msa1042190 | 0.818880 | 1.555667e-52 | -8.615850e-47 |
Msa0002580 | Msa1044680 | 0.862219 | 5.915606e-64 | -8.615850e-47 |
Msa0002580 | Msa1071180 | -0.808889 | 2.480383e-50 | -8.615850e-47 |
Msa0002580 | Msa1072940 | 0.845063 | 5.130945e-59 | -8.615850e-47 |
Msa0002580 | Msa1074370 | 0.805444 | 1.330822e-49 | -8.615850e-47 |
Msa0002580 | Msa1077990 | 0.817260 | 3.616795e-52 | -8.615850e-47 |
Msa0002580 | Msa1078820 | 0.828672 | 7.892486e-55 | -8.615850e-47 |
Msa0002580 | Msa1081690 | 0.816511 | 5.326260e-52 | -8.615850e-47 |
Msa0002580 | Msa1085330 | 0.802525 | 5.384182e-49 | -8.615850e-47 |
Msa0002580 | Msa1090140 | 0.802063 | 6.701565e-49 | -8.615850e-47 |
Msa0002580 | Msa1096960 | 0.859337 | 4.434911e-63 | -8.615850e-47 |
Msa0002580 | Msa1105640 | 0.858220 | 9.566354e-63 | -8.615850e-47 |
Msa0002580 | Msa1105780 | 0.809236 | 2.090557e-50 | -8.615850e-47 |
Msa0002580 | Msa1111380 | 0.807602 | 4.665752e-50 | -8.615850e-47 |
Msa0002580 | Msa1123970 | 0.833484 | 5.193983e-56 | -8.615850e-47 |
Msa0002580 | Msa1132840 | 0.868461 | 6.420128e-66 | -8.615850e-47 |
Msa0002580 | Msa1140220 | 0.830090 | 3.572295e-55 | -8.615850e-47 |
Msa0002580 | Msa1145810 | 0.808184 | 3.508808e-50 | -8.615850e-47 |
Msa0002580 | Msa1148960 | 0.839077 | 1.965615e-57 | -8.615850e-47 |
Msa0002580 | Msa1155170 | -0.842936 | 1.906759e-58 | -8.615850e-47 |
Msa0002580 | Msa1160920 | 0.850620 | 1.509367e-60 | -8.615850e-47 |
Msa0002580 | Msa1163100 | 0.827603 | 1.428185e-54 | -8.615850e-47 |
Msa0002580 | Msa1167470 | 0.802329 | 5.908142e-49 | -8.615850e-47 |
Msa0002580 | Msa1169650 | 0.828772 | 7.465107e-55 | -8.615850e-47 |
Msa0002580 | Msa1184890 | 0.804765 | 1.845740e-49 | -8.615850e-47 |
Msa0002580 | Msa1186020 | 0.813364 | 2.656986e-51 | -8.615850e-47 |
Msa0002580 | Msa1192570 | 0.832034 | 1.190276e-55 | -8.615850e-47 |
Msa0002580 | Msa1200890 | 0.817213 | 3.705384e-52 | -8.615850e-47 |
Msa0002580 | Msa1205280 | 0.834791 | 2.442764e-56 | -8.615850e-47 |
Msa0002580 | Msa1208950 | 0.874241 | 7.874845e-68 | -8.615850e-47 |
Msa0002580 | Msa1216110 | 0.803327 | 3.675010e-49 | -8.615850e-47 |
Msa0002580 | Msa1223570 | 0.800473 | 1.417819e-48 | -8.615850e-47 |
Msa0002580 | Msa1225860 | -0.841862 | 3.673446e-58 | -8.615850e-47 |
Msa0002580 | Msa1226520 | 0.801823 | 7.505957e-49 | -8.615850e-47 |
Msa0002580 | Msa1228200 | 0.867521 | 1.286866e-65 | -8.615850e-47 |
Msa0002580 | Msa1232700 | 0.803574 | 3.267117e-49 | -8.615850e-47 |
Msa0002580 | Msa1238820 | 0.800442 | 1.438305e-48 | -8.615850e-47 |
Msa0002580 | Msa1263490 | 0.809256 | 2.069981e-50 | -8.615850e-47 |
Msa0002580 | Msa1265650 | 0.998885 | 1.865254e-280 | -8.615850e-47 |
Msa0002580 | Msa1267770 | 0.804529 | 2.067437e-49 | -8.615850e-47 |
Msa0002580 | Msa1271270 | 0.818814 | 1.610908e-52 | -8.615850e-47 |
Msa0002580 | Msa1277220 | 0.835652 | 1.481465e-56 | -8.615850e-47 |
Msa0002580 | Msa1296950 | 0.838954 | 2.115115e-57 | -8.615850e-47 |
Msa0002580 | Msa1297230 | 0.857257 | 1.845644e-62 | -8.615850e-47 |
Msa0002580 | Msa1303560 | 0.974334 | 5.666033e-138 | -8.615850e-47 |
Msa0002580 | Msa1303650 | 0.972817 | 2.174516e-135 | -8.615850e-47 |
Msa0002580 | Msa1307560 | 0.809329 | 1.997201e-50 | -8.615850e-47 |
Msa0002580 | Msa1307630 | 0.817437 | 3.300143e-52 | -8.615850e-47 |
Msa0002580 | Msa1314650 | 0.820326 | 7.276410e-53 | -8.615850e-47 |
Msa0002580 | Msa1315160 | 0.809065 | 2.274905e-50 | -8.615850e-47 |
Msa0002580 | Msa1320670 | 0.823705 | 1.199332e-53 | -8.615850e-47 |
Msa0002580 | Msa1325410 | -0.814905 | 1.213868e-51 | -8.615850e-47 |
Msa0002580 | Msa1330420 | 0.809561 | 1.780383e-50 | -8.615850e-47 |
Msa0002580 | Msa1333480 | 0.815114 | 1.091190e-51 | -8.615850e-47 |
Msa0002580 | Msa1340200 | 0.803388 | 3.570324e-49 | -8.615850e-47 |
Msa0002580 | Msa1341840 | 0.809645 | 1.707659e-50 | -8.615850e-47 |
Msa0002580 | Msa1343170 | 0.805364 | 1.383367e-49 | -8.615850e-47 |
Msa0002580 | Msa1343180 | 0.826963 | 2.032634e-54 | -8.615850e-47 |
Msa0002580 | Msa1343430 | 0.838790 | 2.333245e-57 | -8.615850e-47 |
Msa0002580 | Msa1346560 | 0.825929 | 3.586011e-54 | -8.615850e-47 |
Msa0002580 | Msa1348090 | 0.826254 | 3.001530e-54 | -8.615850e-47 |
Msa0002580 | Msa1355450 | 0.814616 | 1.407300e-51 | -8.615850e-47 |
Msa0002580 | Msa1356600 | -0.801439 | 8.998501e-49 | -8.615850e-47 |
Msa0002580 | Msa1359690 | 0.806848 | 6.740717e-50 | -8.615850e-47 |
Msa0002580 | Msa1372040 | 0.881687 | 1.950487e-70 | -8.615850e-47 |
Msa0002580 | Msa1380120 | 0.801935 | 7.118096e-49 | -8.615850e-47 |
Msa0002580 | Msa1382300 | 0.837632 | 4.635078e-57 | -8.615850e-47 |
Msa0002580 | Msa1387620 | 0.801249 | 9.844251e-49 | -8.615850e-47 |
Msa0002580 | Msa1392580 | 0.815294 | 9.953304e-52 | -8.615850e-47 |
Msa0002580 | Msa1393780 | 0.840260 | 9.678394e-58 | -8.615850e-47 |
Msa0002580 | Msa1397400 | 0.834075 | 3.695584e-56 | -8.615850e-47 |
Msa0002580 | Msa1403710 | 0.808665 | 2.770478e-50 | -8.615850e-47 |
Msa0002580 | Msa1405460 | 0.884433 | 1.925391e-71 | -8.615850e-47 |
Msa0002580 | Msa1409410 | 0.806616 | 7.543623e-50 | -8.615850e-47 |
Msa0002580 | Msa1412000 | 0.819898 | 9.119629e-53 | -8.615850e-47 |
Msa0002580 | Msa1412050 | 0.803966 | 2.709098e-49 | -8.615850e-47 |
Msa0002580 | Msa1414640 | 0.827179 | 1.804485e-54 | -8.615850e-47 |
Msa0002580 | Msa1415540 | 0.849164 | 3.853993e-60 | -8.615850e-47 |
Msa0002580 | Msa1420950 | 0.815470 | 9.094527e-52 | -8.615850e-47 |
Msa0002580 | Msa1425880 | 0.829650 | 4.570564e-55 | -8.615850e-47 |
Msa0002580 | Msa1427100 | 0.867496 | 1.311614e-65 | -8.615850e-47 |
Msa0002580 | Msa1432500 | 0.808210 | 3.463473e-50 | -8.615850e-47 |
Msa0002580 | Msa1432610 | 0.804111 | 2.526492e-49 | -8.615850e-47 |
Msa0002580 | Msa1432970 | 0.803757 | 2.993528e-49 | -8.615850e-47 |
Msa0002580 | Msa1433790 | 0.843288 | 1.536139e-58 | -8.615850e-47 |
Msa0002580 | Msa1433810 | 0.843681 | 1.206463e-58 | -8.615850e-47 |
Msa0002580 | Msa1433860 | 0.800142 | 1.656038e-48 | -8.615850e-47 |
Msa0002580 | Msa1437930 | 0.800256 | 1.569643e-48 | -8.615850e-47 |
Msa0002580 | Msa1440310 | 0.809202 | 2.125622e-50 | -8.615850e-47 |
Msa0002580 | Msa1440630 | 0.847601 | 1.042766e-59 | -8.615850e-47 |
Msa0002580 | Msa1440880 | 0.801135 | 1.038685e-48 | -8.615850e-47 |
Msa0002580 | Msa1440960 | 0.824421 | 8.147624e-54 | -8.615850e-47 |
Msa0002580 | Msa1449480 | 0.803482 | 3.414214e-49 | -8.615850e-47 |
Msa0002580 | Msa1450100 | 0.815942 | 7.136903e-52 | -8.615850e-47 |
Msa0002580 | Msa1452140 | 0.805676 | 1.190156e-49 | -8.615850e-47 |
Msa0002580 | Msa1454140 | 0.811283 | 7.566108e-51 | -8.615850e-47 |
Msa0002580 | Msa1464090 | 0.804134 | 2.499279e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0002580 | MtrunA17_Chr4g0071701 | 97.689 | 822 | 17 | 1 | 1 | 822 | 1 | 820 | 0.0 | 1643 |
Msa0002580 | MtrunA17_Chr2g0298801 | 52.194 | 638 | 216 | 18 | 247 | 822 | 399 | 1009 | 0.0 | 548 |
Msa0002580 | MtrunA17_Chr2g0298801 | 76.136 | 176 | 34 | 4 | 1 | 172 | 1 | 172 | 4.57e-62 | 226 |
Msa0002580 | MtrunA17_Chr1g0177421 | 63.102 | 187 | 49 | 5 | 1 | 177 | 1 | 177 | 1.22e-61 | 223 |
Msa0002580 | MtrunA17_Chr1g0197121 | 63.636 | 176 | 49 | 5 | 1 | 170 | 1 | 167 | 4.83e-57 | 210 |
Msa0002580 | MtrunA17_Chr4g0073021 | 51.899 | 237 | 103 | 5 | 1 | 234 | 1 | 229 | 3.62e-53 | 200 |
Msa0002580 | MtrunA17_Chr4g0073021 | 20.624 | 577 | 340 | 17 | 291 | 781 | 454 | 998 | 9.66e-18 | 88.6 |
Msa0002580 | MtrunA17_Chr3g0105051 | 45.349 | 172 | 79 | 3 | 9 | 166 | 9 | 179 | 3.62e-25 | 112 |
Msa0002580 | MtrunA17_Chr3g0105051 | 27.832 | 309 | 159 | 13 | 449 | 709 | 682 | 974 | 3.82e-13 | 73.6 |
Msa0002580 | MtrunA17_Chr5g0430201 | 38.793 | 232 | 125 | 7 | 9 | 226 | 9 | 237 | 9.66e-25 | 111 |
Msa0002580 | MtrunA17_Chr5g0430201 | 26.117 | 291 | 139 | 9 | 449 | 681 | 683 | 955 | 7.86e-13 | 72.8 |
Msa0002580 | MtrunA17_Chr3g0113631 | 42.604 | 169 | 83 | 4 | 9 | 166 | 9 | 174 | 6.09e-22 | 102 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0002580 | AT4G29920.2 | 38.033 | 610 | 319 | 21 | 247 | 819 | 431 | 1018 | 2.05e-96 | 323 |
Msa0002580 | AT4G29920.2 | 58.506 | 241 | 73 | 7 | 1 | 218 | 1 | 237 | 6.11e-61 | 224 |
Msa0002580 | AT4G29920.1 | 37.869 | 610 | 317 | 21 | 247 | 819 | 431 | 1015 | 1.05e-95 | 322 |
Msa0002580 | AT4G29920.1 | 58.506 | 241 | 73 | 7 | 1 | 218 | 1 | 237 | 5.26e-61 | 224 |
Msa0002580 | AT5G57130.1 | 60.924 | 238 | 65 | 5 | 1 | 215 | 1 | 233 | 8.07e-72 | 255 |
Msa0002580 | AT5G57130.1 | 33.498 | 609 | 322 | 28 | 246 | 820 | 468 | 1027 | 1.86e-64 | 234 |
Msa0002580 | AT3G52490.1 | 63.687 | 179 | 50 | 4 | 1 | 174 | 1 | 169 | 1.38e-58 | 214 |
Msa0002580 | AT3G52490.1 | 24.688 | 401 | 223 | 10 | 243 | 587 | 365 | 742 | 1.49e-19 | 94.7 |
Msa0002580 | AT5G57710.1 | 55.157 | 223 | 77 | 7 | 1 | 213 | 1 | 210 | 2.16e-52 | 198 |
Msa0002580 | AT4G30350.1 | 55.172 | 203 | 71 | 4 | 1 | 191 | 1 | 195 | 1.45e-46 | 180 |
Msa0002580 | AT4G30350.1 | 21.622 | 592 | 339 | 20 | 264 | 811 | 409 | 919 | 5.14e-19 | 92.8 |
Msa0002580 | AT1G07200.2 | 44.379 | 169 | 80 | 3 | 9 | 166 | 9 | 174 | 1.15e-28 | 124 |
Msa0002580 | AT1G07200.2 | 22.874 | 341 | 201 | 12 | 289 | 589 | 453 | 771 | 8.28e-11 | 66.6 |
Msa0002580 | AT2G29970.1 | 44.311 | 167 | 83 | 3 | 9 | 166 | 9 | 174 | 1.17e-28 | 124 |
Msa0002580 | AT2G40130.1 | 45.455 | 165 | 80 | 3 | 9 | 166 | 9 | 170 | 2.20e-28 | 122 |
Msa0002580 | AT2G40130.1 | 23.925 | 372 | 217 | 14 | 447 | 786 | 537 | 874 | 4.38e-11 | 67.4 |
Msa0002580 | AT2G40130.2 | 45.455 | 165 | 80 | 3 | 9 | 166 | 9 | 170 | 2.21e-28 | 122 |
Msa0002580 | AT2G40130.2 | 23.925 | 372 | 217 | 14 | 447 | 786 | 540 | 877 | 4.13e-11 | 67.4 |
Find 151 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATTGGGATAGTGGGTTTA+TGG | 0.097831 | 1_1:-4526018 | Msa0002580:CDS |
CTCTTCAATTCTAGGGTTCT+TGG | 0.166740 | 1_1:+4526526 | None:intergenic |
CCTAATAGCATTTCAGAAAA+TGG | 0.180008 | 1_1:+4526839 | None:intergenic |
GTTTGGGTGATAATAGAAAT+TGG | 0.193442 | 1_1:-4526040 | Msa0002580:CDS |
AGAAGAAAACATTGCCTTTC+TGG | 0.197917 | 1_1:-4527684 | Msa0002580:CDS |
AGTTTAATTTCAATGATAAA+AGG | 0.216333 | 1_1:-4527237 | Msa0002580:CDS |
AATTCTAGGGTTCTTGGTTT+TGG | 0.217523 | 1_1:+4526532 | None:intergenic |
TGCCCCTATTCCAGTGATTT+TGG | 0.219820 | 1_1:+4527362 | None:intergenic |
CTGAGAGAAATTTCATGAAT+TGG | 0.260874 | 1_1:+4526756 | None:intergenic |
CTCTTGGGGCTCAAGAAATT+AGG | 0.268217 | 1_1:+4526578 | None:intergenic |
GTTTCAATGTAGCTCTTAAT+AGG | 0.268715 | 1_1:-4529006 | Msa0002580:CDS |
TTGCTGCTGCTGCTGTTCTA+TGG | 0.269718 | 1_1:+4528883 | None:intergenic |
AGTAACAAAGAGGGGAATTT+AGG | 0.272164 | 1_1:-4526701 | Msa0002580:CDS |
TACACTTCCCTCTTTGTCTT+TGG | 0.275398 | 1_1:+4529287 | None:intergenic |
GCTTGACCCTTCATTCTTCC+AGG | 0.278647 | 1_1:-4528490 | Msa0002580:intron |
AGAAATTGGGATTGGGATAG+TGG | 0.281827 | 1_1:-4526026 | Msa0002580:CDS |
CTCTCAGATGGATATGAAAA+AGG | 0.296673 | 1_1:-4526740 | Msa0002580:CDS |
TAACCGAGTTGAAAAGAAAA+TGG | 0.298255 | 1_1:-4527423 | Msa0002580:CDS |
TTTAAATGTTATAATAGTTC+TGG | 0.304204 | 1_1:-4528704 | Msa0002580:CDS |
ATTGTCGACATGGTGTAAAA+TGG | 0.305094 | 1_1:-4525917 | Msa0002580:three_prime_UTR |
AGAAACACATTTGAATTCAA+TGG | 0.324155 | 1_1:+4526341 | None:intergenic |
ACTTCATAGAATGAGTAGTT+TGG | 0.330186 | 1_1:-4525962 | Msa0002580:exon |
GATTCCATTGCAAGCATAGA+AGG | 0.340258 | 1_1:-4527193 | Msa0002580:CDS |
GGGTTGTTGATTTCTGAAAA+AGG | 0.340530 | 1_1:-4526494 | Msa0002580:CDS |
CTTCATAGAATGAGTAGTTT+GGG | 0.341896 | 1_1:-4525961 | Msa0002580:exon |
AGCTGATTTGGTCCTTCAAT+TGG | 0.342833 | 1_1:-4526891 | Msa0002580:CDS |
CTAATAGCATTTCAGAAAAT+GGG | 0.352190 | 1_1:+4526840 | None:intergenic |
CTAACAAAATGTTTGAGAAA+TGG | 0.353619 | 1_1:-4526136 | Msa0002580:CDS |
ATTCTCTTGTGTTGGCTAGA+AGG | 0.358333 | 1_1:-4529177 | Msa0002580:CDS |
TTTGAAGGAACTTAGTCTTA+AGG | 0.360363 | 1_1:+4529105 | None:intergenic |
TTTCAGACAGAACAATTTCA+TGG | 0.360555 | 1_1:-4528609 | Msa0002580:CDS |
AAAGCCCTTTAGCAGTAATA+AGG | 0.361117 | 1_1:-4527788 | Msa0002580:CDS |
TGGCACAGAAGAACAAAATA+AGG | 0.368675 | 1_1:-4527650 | Msa0002580:intron |
GCACCAAAATCACTGGAATA+GGG | 0.370902 | 1_1:-4527365 | Msa0002580:CDS |
AGCACCAAAATCACTGGAAT+AGG | 0.372688 | 1_1:-4527366 | Msa0002580:CDS |
TTTGGGTGATAATAGAAATT+GGG | 0.375578 | 1_1:-4526039 | Msa0002580:CDS |
TAAGACTAAGTTCCTTCAAA+AGG | 0.375696 | 1_1:-4529102 | Msa0002580:CDS |
ATCATTGAAATTAAACTCAA+TGG | 0.376365 | 1_1:+4527243 | None:intergenic |
TGAGAGAAATTTCATGAATT+GGG | 0.385237 | 1_1:+4526757 | None:intergenic |
CCTTTCTGGCTTCAGTCTCA+TGG | 0.390835 | 1_1:-4527670 | Msa0002580:CDS |
TTGTTTCCAGCATATGAGAT+AGG | 0.393515 | 1_1:+4527809 | None:intergenic |
TTGATGATCCTAGTGTTAGT+AGG | 0.397262 | 1_1:-4528805 | Msa0002580:CDS |
GTTCTTCTCTTCAATGCTTG+TGG | 0.404826 | 1_1:+4526646 | None:intergenic |
ATGAGTAGTTTGGGTATTGA+GGG | 0.408214 | 1_1:-4525952 | Msa0002580:exon |
AATTGATTGACATAACATAA+TGG | 0.409546 | 1_1:+4525828 | None:intergenic |
TTTCATTCTCTTCAATTCTA+GGG | 0.410585 | 1_1:+4526519 | None:intergenic |
CTGTGATTCTCACTAGTTGA+AGG | 0.411339 | 1_1:+4528653 | None:intergenic |
CAGTTTAGAAACAGTTAACT+TGG | 0.417821 | 1_1:-4526093 | Msa0002580:CDS |
GTGATAATAGAAATTGGGAT+TGG | 0.418688 | 1_1:-4526034 | Msa0002580:CDS |
ATGAAAGAGCTCTAGTAAAC+AGG | 0.418818 | 1_1:+4529391 | None:intergenic |
CAGCTTTCATGTTCAGATCA+AGG | 0.421676 | 1_1:+4526423 | None:intergenic |
TAATTAACTTGGATACTCTT+AGG | 0.423030 | 1_1:+4525984 | None:intergenic |
AGTAGGGTTATGAGAGAAGC+TGG | 0.424536 | 1_1:-4528788 | Msa0002580:CDS |
GTTTAATTTCAATGATAAAA+GGG | 0.427762 | 1_1:-4527236 | Msa0002580:CDS |
TGCACCTTATTACTGCTAAA+GGG | 0.429521 | 1_1:+4527784 | None:intergenic |
AATGAGTAGTTTGGGTATTG+AGG | 0.431544 | 1_1:-4525953 | Msa0002580:exon |
GTGGATGTTGTGAAGTTTGA+TGG | 0.431778 | 1_1:+4529053 | None:intergenic |
AGAATTGAAGAGAATGAAAA+GGG | 0.443195 | 1_1:-4526515 | Msa0002580:CDS |
TTGTCGACATGGTGTAAAAT+GGG | 0.447560 | 1_1:-4525916 | Msa0002580:three_prime_UTR |
CAATGCAGCAATGAGAGCAT+TGG | 0.451420 | 1_1:+4528937 | None:intergenic |
TAGAATTGAAGAGAATGAAA+AGG | 0.451533 | 1_1:-4526516 | Msa0002580:CDS |
TTCATGAAATTTCTCTCAGA+TGG | 0.451801 | 1_1:-4526752 | Msa0002580:CDS |
TTTGAAGCATTCTCTTGTGT+TGG | 0.454108 | 1_1:-4529185 | Msa0002580:CDS |
AATATTACCTGGAAGAATGA+AGG | 0.464963 | 1_1:+4528483 | None:intergenic |
ATGCACCTTATTACTGCTAA+AGG | 0.466662 | 1_1:+4527783 | None:intergenic |
GGGTCATTTGAAGATGTTTG+TGG | 0.467210 | 1_1:-4526233 | Msa0002580:CDS |
TGATAATAGAAATTGGGATT+GGG | 0.478557 | 1_1:-4526033 | Msa0002580:CDS |
AAGACTAAGTTCCTTCAAAA+GGG | 0.480191 | 1_1:-4529101 | Msa0002580:CDS |
ATCAAAGGAGAAGGTGTTGT+TGG | 0.481111 | 1_1:+4528980 | None:intergenic |
AAAATGAAATTTCATTTACA+TGG | 0.483113 | 1_1:-4526988 | Msa0002580:CDS |
TGAAACTTTAAGTAACAAAG+AGG | 0.484462 | 1_1:-4526711 | Msa0002580:CDS |
ACTGAGTTGACGAGTACATC+AGG | 0.485948 | 1_1:-4528521 | Msa0002580:CDS |
TTTACCTTCTATGCTTGCAA+TGG | 0.488616 | 1_1:+4527189 | None:intergenic |
TGATGATCCTAGTGTTAGTA+GGG | 0.489344 | 1_1:-4528804 | Msa0002580:CDS |
GTAATATTCATCTTAACAAA+AGG | 0.492526 | 1_1:-4526674 | Msa0002580:CDS |
ATTCTATGAAGTAATTAACT+TGG | 0.497847 | 1_1:+4525973 | None:intergenic |
GACAAAGAGGGAAGTGTAGT+GGG | 0.500303 | 1_1:-4529282 | Msa0002580:five_prime_UTR |
ACGGAATCGAGGTGTAAGAT+TGG | 0.504184 | 1_1:+4527285 | None:intergenic |
AGATGCTCATCTTGGAATCA+AGG | 0.504959 | 1_1:+4527839 | None:intergenic |
GTTCTGAGAGATGCTCATCT+TGG | 0.505466 | 1_1:+4527831 | None:intergenic |
CAATGGTGCTGCATGATTGT+TGG | 0.507077 | 1_1:+4527260 | None:intergenic |
AACATAATGGTTACAAGAGA+AGG | 0.509994 | 1_1:+4525841 | None:intergenic |
GAACATGAAAGCTGATGAAG+AGG | 0.511062 | 1_1:-4526414 | Msa0002580:CDS |
ACAAAGAGGGAAGTGTAGTG+GGG | 0.511542 | 1_1:-4529281 | Msa0002580:five_prime_UTR |
GAAATTGGGATTGGGATAGT+GGG | 0.511786 | 1_1:-4526025 | Msa0002580:CDS |
GAAGGCTGAGAGTGAATCAA+AGG | 0.518124 | 1_1:+4528965 | None:intergenic |
TGTTGTGAAGTTTGATGGTG+TGG | 0.518229 | 1_1:+4529058 | None:intergenic |
ACAAACAGCACCAAAATCAC+TGG | 0.519494 | 1_1:-4527372 | Msa0002580:CDS |
TCAGAACCTATCTCATATGC+TGG | 0.523908 | 1_1:-4527815 | Msa0002580:CDS |
CCATGAGACTGAAGCCAGAA+AGG | 0.527419 | 1_1:+4527670 | None:intergenic |
AGCTTTCATGTTCAGATCAA+GGG | 0.528546 | 1_1:+4526424 | None:intergenic |
GAGAAAACATCAACAGCTTG+TGG | 0.530991 | 1_1:-4526810 | Msa0002580:CDS |
AACAGTTAACTTGGGAGGGA+AGG | 0.532413 | 1_1:-4526084 | Msa0002580:CDS |
ACACAAGTTCAGATAAAGAC+AGG | 0.536618 | 1_1:-4526289 | Msa0002580:CDS |
GAAACTTTAAGTAACAAAGA+GGG | 0.538982 | 1_1:-4526710 | Msa0002580:CDS |
CACCAAAATCACTGGAATAG+GGG | 0.539949 | 1_1:-4527364 | Msa0002580:CDS |
TAGAAACAGTTAACTTGGGA+GGG | 0.540519 | 1_1:-4526088 | Msa0002580:CDS |
ACGAGTACATCAGGTGGACT+TGG | 0.541210 | 1_1:-4528512 | Msa0002580:CDS |
TGATGATTCAAGTGAAAAGG+TGG | 0.542844 | 1_1:-4527137 | Msa0002580:CDS |
ATATATCAAGTGATGCGCTC+AGG | 0.544488 | 1_1:-4529253 | Msa0002580:exon |
TGTTGATTTGGTATCAAACA+AGG | 0.544854 | 1_1:+4527015 | None:intergenic |
TGAAGCAGCCTCTGCTGTGA+GGG | 0.545563 | 1_1:+4529210 | None:intergenic |
TGATGCTTGATGAATTATTG+AGG | 0.548945 | 1_1:+4527320 | None:intergenic |
GCTCAATTTCTCAGACCTGC+AGG | 0.549147 | 1_1:-4527709 | Msa0002580:CDS |
AAATGTTATAATAGTTCTGG+TGG | 0.549816 | 1_1:-4528701 | Msa0002580:CDS |
CAATGATGATTCAAGTGAAA+AGG | 0.551243 | 1_1:-4527140 | Msa0002580:CDS |
AAACTGTTATCAATTTGTTG+TGG | 0.554067 | 1_1:-4526619 | Msa0002580:CDS |
CAAAGAGGGAAGTGTAGTGG+GGG | 0.555119 | 1_1:-4529280 | Msa0002580:five_prime_UTR |
CTTGCAATGGAATCAAAGAC+TGG | 0.557776 | 1_1:+4527202 | None:intergenic |
ATATTACCTGGAAGAATGAA+GGG | 0.561317 | 1_1:+4528484 | None:intergenic |
TGTTCTGTCTGAAACTGCTA+AGG | 0.561994 | 1_1:+4528618 | None:intergenic |
GCACAAGCTCATCAAAGAAG+AGG | 0.562580 | 1_1:-4528908 | Msa0002580:CDS |
TCACTAGTTGAAGGTGAACA+TGG | 0.565455 | 1_1:+4528662 | None:intergenic |
GAATCGAGGTGTAAGATTGG+AGG | 0.571539 | 1_1:+4527288 | None:intergenic |
TTCTTGTAAAATTGTCGACA+TGG | 0.573049 | 1_1:-4525927 | Msa0002580:three_prime_UTR |
TTAGAAACAGTTAACTTGGG+AGG | 0.573524 | 1_1:-4526089 | Msa0002580:CDS |
AAACTTTAAGTAACAAAGAG+GGG | 0.574195 | 1_1:-4526709 | Msa0002580:CDS |
TGAGAGTGAATCAAAGGAGA+AGG | 0.577096 | 1_1:+4528971 | None:intergenic |
CTCATAACCCTACTAACACT+AGG | 0.579503 | 1_1:+4528797 | None:intergenic |
AGTTTAGAAACAGTTAACTT+GGG | 0.581458 | 1_1:-4526092 | Msa0002580:CDS |
GTTAACTTGGGAGGGAAGGA+AGG | 0.581750 | 1_1:-4526080 | Msa0002580:CDS |
ACTAGCTTCCAAAGACAAAG+AGG | 0.584079 | 1_1:-4529295 | Msa0002580:five_prime_UTR |
ATATTCATCTTAACAAAAGG+TGG | 0.591782 | 1_1:-4526671 | Msa0002580:CDS |
GTAAAGATTAGTCTTGCACT+TGG | 0.591838 | 1_1:-4527163 | Msa0002580:CDS |
AAAGTGATGGCTACATGTAG+AGG | 0.593224 | 1_1:+4529133 | None:intergenic |
AGACAAAGAGGGAAGTGTAG+TGG | 0.599661 | 1_1:-4529283 | Msa0002580:five_prime_UTR |
TCAAGAGCTCTAGATTGAAG+TGG | 0.600534 | 1_1:+4529034 | None:intergenic |
TCTTAAGGTAAGTAAAGTGA+TGG | 0.602666 | 1_1:+4529120 | None:intergenic |
CTTGTGTTGGCTAGAAGGAG+AGG | 0.606431 | 1_1:-4529172 | Msa0002580:CDS |
CTGAAGCAGCCTCTGCTGTG+AGG | 0.607118 | 1_1:+4529209 | None:intergenic |
ATGAGAGCATTGGAAAGTGA+AGG | 0.611410 | 1_1:+4528947 | None:intergenic |
GGAATAGTTTCAGATTGCCA+TGG | 0.614508 | 1_1:+4527052 | None:intergenic |
GATTGTTGGCGACGGAATCG+AGG | 0.618402 | 1_1:+4527274 | None:intergenic |
TGCTGCATGATTGTTGGCGA+CGG | 0.618752 | 1_1:+4527266 | None:intergenic |
TAGCAGTAATAAGGTGCATG+AGG | 0.621940 | 1_1:-4527779 | Msa0002580:CDS |
GTGATTGAAGACATGTGTGT+GGG | 0.624972 | 1_1:-4526173 | Msa0002580:CDS |
TAATAGCATTTCAGAAAATG+GGG | 0.629233 | 1_1:+4526841 | None:intergenic |
CTAGCTTCCAAAGACAAAGA+GGG | 0.630180 | 1_1:-4529294 | Msa0002580:five_prime_UTR |
GATGATTCAAGTGAAAAGGT+GGG | 0.632079 | 1_1:-4527136 | Msa0002580:CDS |
TATCAAGTGATGCGCTCAGG+AGG | 0.632949 | 1_1:-4529250 | Msa0002580:exon |
TGTTATAATAGTTCTGGTGG+TGG | 0.635592 | 1_1:-4528698 | Msa0002580:CDS |
AAAGCTGATGAAGAGGAAGA+TGG | 0.637095 | 1_1:-4526407 | Msa0002580:CDS |
GCAGCAGACCCTCACAGCAG+AGG | 0.647393 | 1_1:-4529218 | Msa0002580:CDS |
TAGAAGGAGAGGTCATCCAC+AGG | 0.649362 | 1_1:-4529161 | Msa0002580:CDS |
AAAGAGGGAAGTGTAGTGGG+GGG | 0.656972 | 1_1:-4529279 | Msa0002580:five_prime_UTR |
TGATTGAAGACATGTGTGTG+GGG | 0.676956 | 1_1:-4526172 | Msa0002580:CDS |
ACATGTAGAGGAGTGACCTG+TGG | 0.684775 | 1_1:+4529145 | None:intergenic |
GGTGATTGAAGACATGTGTG+TGG | 0.690099 | 1_1:-4526174 | Msa0002580:CDS |
TATTGCAAGAGAATGTGCCA+TGG | 0.693666 | 1_1:-4527069 | Msa0002580:CDS |
GAGTTGACGAGTACATCAGG+TGG | 0.710146 | 1_1:-4528518 | Msa0002580:CDS |
GAATTGAAGAGAATGAAAAG+GGG | 0.732384 | 1_1:-4526514 | Msa0002580:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAATGTTATAATAGTTC+TGG | - | chr1_1:4526514-4526533 | Msa0002580:CDS | 15.0% |
!!! | TTCTTAATTTGTTTGATTTA+AGG | - | chr1_1:4526879-4526898 | Msa0002580:CDS | 15.0% |
!!! | AGTTTAATTTCAATGATAAA+AGG | - | chr1_1:4527981-4528000 | Msa0002580:intron | 15.0% |
!!! | GTTTAATTTCAATGATAAAA+GGG | - | chr1_1:4527982-4528001 | Msa0002580:intron | 15.0% |
!! | AAAATGAAATTTCATTTACA+TGG | - | chr1_1:4528230-4528249 | Msa0002580:intron | 15.0% |
!!! | TTTTTTCTGTTTAAGATTAA+AGG | - | chr1_1:4528964-4528983 | Msa0002580:CDS | 15.0% |
!!! | TTTTTCTGTTTAAGATTAAA+GGG | - | chr1_1:4528965-4528984 | Msa0002580:CDS | 15.0% |
!! | GTTTCTTTGATAGAAAAAAT+AGG | - | chr1_1:4525889-4525908 | Msa0002580:three_prime_UTR | 20.0% |
!! | CATTTAAAAACAGAATTAGA+AGG | + | chr1_1:4526502-4526521 | None:intergenic | 20.0% |
!! | AAGCAAAATAAAATATTACC+TGG | + | chr1_1:4526749-4526768 | None:intergenic | 20.0% |
!!! | TGTTTGATTTAAGGTATAAA+AGG | - | chr1_1:4526888-4526907 | Msa0002580:CDS | 20.0% |
!!! | TTATGTTTACCTTTCTTTTT+TGG | + | chr1_1:4526939-4526958 | None:intergenic | 20.0% |
!! | CCATAATTAAGCAAATAAAT+AGG | + | chr1_1:4527326-4527345 | None:intergenic | 20.0% |
!! | CCTATTTATTTGCTTAATTA+TGG | - | chr1_1:4527323-4527342 | Msa0002580:CDS | 20.0% |
!!! | ATGAATAATTCAACATTTTC+AGG | - | chr1_1:4527766-4527785 | Msa0002580:CDS | 20.0% |
!! | ATCATTGAAATTAAACTCAA+TGG | + | chr1_1:4527978-4527997 | None:intergenic | 20.0% |
!!! | TTCATTTTGTTTTGTTGATT+TGG | + | chr1_1:4528218-4528237 | None:intergenic | 20.0% |
!!! | TTTACATGGTTATTTTTACA+AGG | - | chr1_1:4528244-4528263 | Msa0002580:intron | 20.0% |
!! | GTAATATTCATCTTAACAAA+AGG | - | chr1_1:4528544-4528563 | Msa0002580:CDS | 20.0% |
!!! | TATACATTTTAGACTTTGTT+TGG | - | chr1_1:4529161-4529180 | Msa0002580:CDS | 20.0% |
!!! | ATACATTTTAGACTTTGTTT+GGG | - | chr1_1:4529162-4529181 | Msa0002580:CDS | 20.0% |
!! | ATTCTATGAAGTAATTAACT+TGG | + | chr1_1:4529248-4529267 | None:intergenic | 20.0% |
!! | AATTGATTGACATAACATAA+TGG | + | chr1_1:4529393-4529412 | None:intergenic | 20.0% |
!!! | TTTTTTCTATCAAAGAAACG+TGG | + | chr1_1:4525888-4525907 | None:intergenic | 25.0% |
!!! | AAATGTTATAATAGTTCTGG+TGG | - | chr1_1:4526517-4526536 | Msa0002580:CDS | 25.0% |
! | TATAACACTTAGTACATGTT+TGG | - | chr1_1:4526779-4526798 | Msa0002580:CDS | 25.0% |
! | ACACATGTTATGTTACTAAA+AGG | + | chr1_1:4526860-4526879 | None:intergenic | 25.0% |
! | TAAATGCAACCAAAAAAGAA+AGG | - | chr1_1:4526927-4526946 | Msa0002580:CDS | 25.0% |
!!! | TCAGTCAAATTATTTTGAGT+TGG | - | chr1_1:4527177-4527196 | Msa0002580:CDS | 25.0% |
! | AAAGACTACACTTTATCTAA+AGG | - | chr1_1:4527208-4527227 | Msa0002580:CDS | 25.0% |
!!! | TTGAGCTTCTTTTTCATAAT+TGG | + | chr1_1:4527495-4527514 | None:intergenic | 25.0% |
!! | ATTCCATTTTCTTTTCAACT+CGG | + | chr1_1:4527801-4527820 | None:intergenic | 25.0% |
!!! | TTTTTAGCATATCCAATTGA+AGG | + | chr1_1:4528342-4528361 | None:intergenic | 25.0% |
! | TCAATTGGATATGCTAAAAA+AGG | - | chr1_1:4528342-4528361 | Msa0002580:intron | 25.0% |
! | TAATAGCATTTCAGAAAATG+GGG | + | chr1_1:4528380-4528399 | None:intergenic | 25.0% |
! | CTAATAGCATTTCAGAAAAT+GGG | + | chr1_1:4528381-4528400 | None:intergenic | 25.0% |
! | TGAGAGAAATTTCATGAATT+GGG | + | chr1_1:4528464-4528483 | None:intergenic | 25.0% |
! | TGAAACTTTAAGTAACAAAG+AGG | - | chr1_1:4528507-4528526 | Msa0002580:CDS | 25.0% |
! | GAAACTTTAAGTAACAAAGA+GGG | - | chr1_1:4528508-4528527 | Msa0002580:CDS | 25.0% |
! | AAACTTTAAGTAACAAAGAG+GGG | - | chr1_1:4528509-4528528 | Msa0002580:CDS | 25.0% |
! | ATATTCATCTTAACAAAAGG+TGG | - | chr1_1:4528547-4528566 | Msa0002580:CDS | 25.0% |
!!! | AAACTGTTATCAATTTGTTG+TGG | - | chr1_1:4528599-4528618 | Msa0002580:CDS | 25.0% |
! | TTTCATTCTCTTCAATTCTA+GGG | + | chr1_1:4528702-4528721 | None:intergenic | 25.0% |
!! | TTTTCATTCTCTTCAATTCT+AGG | + | chr1_1:4528703-4528722 | None:intergenic | 25.0% |
! | TAGAATTGAAGAGAATGAAA+AGG | - | chr1_1:4528702-4528721 | Msa0002580:CDS | 25.0% |
! | AGAATTGAAGAGAATGAAAA+GGG | - | chr1_1:4528703-4528722 | Msa0002580:CDS | 25.0% |
! | AGAAACACATTTGAATTCAA+TGG | + | chr1_1:4528880-4528899 | None:intergenic | 25.0% |
!!! | GAATTTTAGTGTAGATGAAA+AGG | - | chr1_1:4529023-4529042 | Msa0002580:CDS | 25.0% |
! | CTAACAAAATGTTTGAGAAA+TGG | - | chr1_1:4529082-4529101 | Msa0002580:CDS | 25.0% |
! | AGTTTAGAAACAGTTAACTT+GGG | - | chr1_1:4529126-4529145 | Msa0002580:CDS | 25.0% |
! | TTTGGGTGATAATAGAAATT+GGG | - | chr1_1:4529179-4529198 | Msa0002580:CDS | 25.0% |
! | TGATAATAGAAATTGGGATT+GGG | - | chr1_1:4529185-4529204 | Msa0002580:CDS | 25.0% |
!! | TAATTAACTTGGATACTCTT+AGG | + | chr1_1:4529237-4529256 | None:intergenic | 25.0% |
TCTTAAGGTAAGTAAAGTGA+TGG | + | chr1_1:4526101-4526120 | None:intergenic | 30.0% | |
!! | TTTGAAGGAACTTAGTCTTA+AGG | + | chr1_1:4526116-4526135 | None:intergenic | 30.0% |
TAAGACTAAGTTCCTTCAAA+AGG | - | chr1_1:4526116-4526135 | Msa0002580:CDS | 30.0% | |
AAGACTAAGTTCCTTCAAAA+GGG | - | chr1_1:4526117-4526136 | Msa0002580:CDS | 30.0% | |
GTTTCAATGTAGCTCTTAAT+AGG | - | chr1_1:4526212-4526231 | Msa0002580:CDS | 30.0% | |
TTTCAGACAGAACAATTTCA+TGG | - | chr1_1:4526609-4526628 | Msa0002580:CDS | 30.0% | |
ATATTACCTGGAAGAATGAA+GGG | + | chr1_1:4526737-4526756 | None:intergenic | 30.0% | |
AATATTACCTGGAAGAATGA+AGG | + | chr1_1:4526738-4526757 | None:intergenic | 30.0% | |
!! | ACACATGTTAAAAGCATTGT+TGG | - | chr1_1:4527066-4527085 | Msa0002580:CDS | 30.0% |
!! | ATGTTAAAAGCATTGTTGGT+TGG | - | chr1_1:4527070-4527089 | Msa0002580:CDS | 30.0% |
ATAATGCAATCATCGTGTAT+TGG | + | chr1_1:4527650-4527669 | None:intergenic | 30.0% | |
CACATCTATGATAGTACTAT+TGG | - | chr1_1:4527740-4527759 | Msa0002580:CDS | 30.0% | |
! | TAACCGAGTTGAAAAGAAAA+TGG | - | chr1_1:4527795-4527814 | Msa0002580:CDS | 30.0% |
TGATGCTTGATGAATTATTG+AGG | + | chr1_1:4527901-4527920 | None:intergenic | 30.0% | |
CAATGATGATTCAAGTGAAA+AGG | - | chr1_1:4528078-4528097 | Msa0002580:intron | 30.0% | |
! | AACAAGGCTTTTGATATTGA+AGG | + | chr1_1:4528190-4528209 | None:intergenic | 30.0% |
!! | TGTTGATTTGGTATCAAACA+AGG | + | chr1_1:4528206-4528225 | None:intergenic | 30.0% |
CCTAATAGCATTTCAGAAAA+TGG | + | chr1_1:4528382-4528401 | None:intergenic | 30.0% | |
!!! | CCATTTTCTGAAATGCTATT+AGG | - | chr1_1:4528379-4528398 | Msa0002580:intron | 30.0% |
CTGAGAGAAATTTCATGAAT+TGG | + | chr1_1:4528465-4528484 | None:intergenic | 30.0% | |
TTCATGAAATTTCTCTCAGA+TGG | - | chr1_1:4528466-4528485 | Msa0002580:intron | 30.0% | |
! | TCAAATTCAGCTTTTCTCTT+GGG | + | chr1_1:4528658-4528677 | None:intergenic | 30.0% |
! | ATCAAATTCAGCTTTTCTCT+TGG | + | chr1_1:4528659-4528678 | None:intergenic | 30.0% |
GAATTGAAGAGAATGAAAAG+GGG | - | chr1_1:4528704-4528723 | Msa0002580:CDS | 30.0% | |
! | TTCTGAAAAAGGAAGCAAAA+AGG | - | chr1_1:4528735-4528754 | Msa0002580:CDS | 30.0% |
TGTTTGTGGTAAGAAAAATG+TGG | - | chr1_1:4528999-4529018 | Msa0002580:CDS | 30.0% | |
CAGTTTAGAAACAGTTAACT+TGG | - | chr1_1:4529125-4529144 | Msa0002580:CDS | 30.0% | |
GTTTGGGTGATAATAGAAAT+TGG | - | chr1_1:4529178-4529197 | Msa0002580:CDS | 30.0% | |
GTGATAATAGAAATTGGGAT+TGG | - | chr1_1:4529184-4529203 | Msa0002580:CDS | 30.0% | |
ACTTCATAGAATGAGTAGTT+TGG | - | chr1_1:4529256-4529275 | Msa0002580:exon | 30.0% | |
CTTCATAGAATGAGTAGTTT+GGG | - | chr1_1:4529257-4529276 | Msa0002580:exon | 30.0% | |
TTCTTGTAAAATTGTCGACA+TGG | - | chr1_1:4529291-4529310 | Msa0002580:five_prime_UTR | 30.0% | |
AACATAATGGTTACAAGAGA+AGG | + | chr1_1:4529380-4529399 | None:intergenic | 30.0% | |
! | ATGAAAGAGCTCTAGTAAAC+AGG | + | chr1_1:4525830-4525849 | None:intergenic | 35.0% |
! | TTTGAAGCATTCTCTTGTGT+TGG | - | chr1_1:4526033-4526052 | Msa0002580:CDS | 35.0% |
! | TTGATGATCCTAGTGTTAGT+AGG | - | chr1_1:4526413-4526432 | Msa0002580:CDS | 35.0% |
TGATGATCCTAGTGTTAGTA+GGG | - | chr1_1:4526414-4526433 | Msa0002580:CDS | 35.0% | |
!! | TGTTATAATAGTTCTGGTGG+TGG | - | chr1_1:4526520-4526539 | Msa0002580:CDS | 35.0% |
CTAAAAGGTTAGTGCATGTT+TGG | + | chr1_1:4526845-4526864 | None:intergenic | 35.0% | |
!! | AAAGTGTTGTCTAGTTCTGA+TGG | - | chr1_1:4526972-4526991 | Msa0002580:CDS | 35.0% |
!! | ATTTGTTGTGCAATGTGTTG+AGG | - | chr1_1:4527014-4527033 | Msa0002580:CDS | 35.0% |
! | AATGTGTTGAGGAGTATGTA+CGG | - | chr1_1:4527025-4527044 | Msa0002580:CDS | 35.0% |
TTGACTGATTAACGTGTAAG+AGG | + | chr1_1:4527165-4527184 | None:intergenic | 35.0% | |
TTGTTTCCAGCATATGAGAT+AGG | + | chr1_1:4527412-4527431 | None:intergenic | 35.0% | |
AAAGCCCTTTAGCAGTAATA+AGG | - | chr1_1:4527430-4527449 | Msa0002580:CDS | 35.0% | |
TGCACCTTATTACTGCTAAA+GGG | + | chr1_1:4527437-4527456 | None:intergenic | 35.0% | |
ATGCACCTTATTACTGCTAA+AGG | + | chr1_1:4527438-4527457 | None:intergenic | 35.0% | |
AGAAGAAAACATTGCCTTTC+TGG | - | chr1_1:4527534-4527553 | Msa0002580:intron | 35.0% | |
TGGCACAGAAGAACAAAATA+AGG | - | chr1_1:4527568-4527587 | Msa0002580:intron | 35.0% | |
!!! | GATTTTGGTGCTGTTTGTTT+TGG | + | chr1_1:4527844-4527863 | None:intergenic | 35.0% |
TTTACCTTCTATGCTTGCAA+TGG | + | chr1_1:4528032-4528051 | None:intergenic | 35.0% | |
!! | GTAAAGATTAGTCTTGCACT+TGG | - | chr1_1:4528055-4528074 | Msa0002580:intron | 35.0% |
TGATGATTCAAGTGAAAAGG+TGG | - | chr1_1:4528081-4528100 | Msa0002580:intron | 35.0% | |
GATGATTCAAGTGAAAAGGT+GGG | - | chr1_1:4528082-4528101 | Msa0002580:intron | 35.0% | |
! | GCTATTGCAGAATCAGTTTT+TGG | - | chr1_1:4528301-4528320 | Msa0002580:intron | 35.0% |
!!! | AGTTTTTGGTTCAGCTGATT+TGG | - | chr1_1:4528315-4528334 | Msa0002580:intron | 35.0% |
CTCTCAGATGGATATGAAAA+AGG | - | chr1_1:4528478-4528497 | Msa0002580:intron | 35.0% | |
AGTAACAAAGAGGGGAATTT+AGG | - | chr1_1:4528517-4528536 | Msa0002580:CDS | 35.0% | |
! | CAAATTCAGCTTTTCTCTTG+GGG | + | chr1_1:4528657-4528676 | None:intergenic | 35.0% |
!!! | AATTCTAGGGTTCTTGGTTT+TGG | + | chr1_1:4528689-4528708 | None:intergenic | 35.0% |
!! | GGGTTGTTGATTTCTGAAAA+AGG | - | chr1_1:4528724-4528743 | Msa0002580:CDS | 35.0% |
AGCTTTCATGTTCAGATCAA+GGG | + | chr1_1:4528797-4528816 | None:intergenic | 35.0% | |
ACACAAGTTCAGATAAAGAC+AGG | - | chr1_1:4528929-4528948 | Msa0002580:CDS | 35.0% | |
! | TTAGAAACAGTTAACTTGGG+AGG | - | chr1_1:4529129-4529148 | Msa0002580:CDS | 35.0% |
! | TAGAAACAGTTAACTTGGGA+GGG | - | chr1_1:4529130-4529149 | Msa0002580:CDS | 35.0% |
! | AATGAGTAGTTTGGGTATTG+AGG | - | chr1_1:4529265-4529284 | Msa0002580:five_prime_UTR | 35.0% |
!! | ATGAGTAGTTTGGGTATTGA+GGG | - | chr1_1:4529266-4529285 | Msa0002580:five_prime_UTR | 35.0% |
ATTGTCGACATGGTGTAAAA+TGG | - | chr1_1:4529301-4529320 | Msa0002580:five_prime_UTR | 35.0% | |
TTGTCGACATGGTGTAAAAT+GGG | - | chr1_1:4529302-4529321 | Msa0002580:five_prime_UTR | 35.0% | |
! | ACTAGCTTCCAAAGACAAAG+AGG | - | chr1_1:4525923-4525942 | Msa0002580:three_prime_UTR | 40.0% |
CTAGCTTCCAAAGACAAAGA+GGG | - | chr1_1:4525924-4525943 | Msa0002580:three_prime_UTR | 40.0% | |
TACACTTCCCTCTTTGTCTT+TGG | + | chr1_1:4525934-4525953 | None:intergenic | 40.0% | |
ATATATCAAGTGATGCGCTC+AGG | - | chr1_1:4525965-4525984 | Msa0002580:exon | 40.0% | |
!! | ATTCTCTTGTGTTGGCTAGA+AGG | - | chr1_1:4526041-4526060 | Msa0002580:CDS | 40.0% |
AAAGTGATGGCTACATGTAG+AGG | + | chr1_1:4526088-4526107 | None:intergenic | 40.0% | |
! | CTTAAGACAAGCCCTTTTGA+AGG | + | chr1_1:4526131-4526150 | None:intergenic | 40.0% |
!! | TGTTGTGAAGTTTGATGGTG+TGG | + | chr1_1:4526163-4526182 | None:intergenic | 40.0% |
GTGGATGTTGTGAAGTTTGA+TGG | + | chr1_1:4526168-4526187 | None:intergenic | 40.0% | |
!! | TCAAGAGCTCTAGATTGAAG+TGG | + | chr1_1:4526187-4526206 | None:intergenic | 40.0% |
!! | ATCAAAGGAGAAGGTGTTGT+TGG | + | chr1_1:4526241-4526260 | None:intergenic | 40.0% |
TGAGAGTGAATCAAAGGAGA+AGG | + | chr1_1:4526250-4526269 | None:intergenic | 40.0% | |
!! | ATGAGAGCATTGGAAAGTGA+AGG | + | chr1_1:4526274-4526293 | None:intergenic | 40.0% |
CTCATAACCCTACTAACACT+AGG | + | chr1_1:4526424-4526443 | None:intergenic | 40.0% | |
TCACTAGTTGAAGGTGAACA+TGG | + | chr1_1:4526559-4526578 | None:intergenic | 40.0% | |
CTGTGATTCTCACTAGTTGA+AGG | + | chr1_1:4526568-4526587 | None:intergenic | 40.0% | |
! | TGTTCTGTCTGAAACTGCTA+AGG | + | chr1_1:4526603-4526622 | None:intergenic | 40.0% |
! | GTCAACTCAGTTCTTTTTGG+TGG | + | chr1_1:4526688-4526707 | None:intergenic | 40.0% |
! | CTCGTCAACTCAGTTCTTTT+TGG | + | chr1_1:4526691-4526710 | None:intergenic | 40.0% |
TATGTACGGTTACTGAGCTA+TGG | - | chr1_1:4527039-4527058 | Msa0002580:CDS | 40.0% | |
!! | AGCATTGTTGGTTGGTAGTA+AGG | - | chr1_1:4527078-4527097 | Msa0002580:CDS | 40.0% |
AGATGCTCATCTTGGAATCA+AGG | + | chr1_1:4527382-4527401 | None:intergenic | 40.0% | |
TCAGAACCTATCTCATATGC+TGG | - | chr1_1:4527403-4527422 | Msa0002580:CDS | 40.0% | |
TAGCAGTAATAAGGTGCATG+AGG | - | chr1_1:4527439-4527458 | Msa0002580:intron | 40.0% | |
! | AATGTTTTCTTCTGTCCTGC+AGG | + | chr1_1:4527527-4527546 | None:intergenic | 40.0% |
!!! | GTTTGTTTTGGTGTAGACAG+TGG | + | chr1_1:4527832-4527851 | None:intergenic | 40.0% |
ACAAACAGCACCAAAATCAC+TGG | - | chr1_1:4527846-4527865 | Msa0002580:intron | 40.0% | |
AGCACCAAAATCACTGGAAT+AGG | - | chr1_1:4527852-4527871 | Msa0002580:intron | 40.0% | |
GCACCAAAATCACTGGAATA+GGG | - | chr1_1:4527853-4527872 | Msa0002580:intron | 40.0% | |
CACCAAAATCACTGGAATAG+GGG | - | chr1_1:4527854-4527873 | Msa0002580:intron | 40.0% | |
CTTGCAATGGAATCAAAGAC+TGG | + | chr1_1:4528019-4528038 | None:intergenic | 40.0% | |
GATTCCATTGCAAGCATAGA+AGG | - | chr1_1:4528025-4528044 | Msa0002580:intron | 40.0% | |
TATTGCAAGAGAATGTGCCA+TGG | - | chr1_1:4528149-4528168 | Msa0002580:intron | 40.0% | |
GGAATAGTTTCAGATTGCCA+TGG | + | chr1_1:4528169-4528188 | None:intergenic | 40.0% | |
!! | AGCTGATTTGGTCCTTCAAT+TGG | - | chr1_1:4528327-4528346 | Msa0002580:intron | 40.0% |
GAGAAAACATCAACAGCTTG+TGG | - | chr1_1:4528408-4528427 | Msa0002580:intron | 40.0% | |
GTTCTTCTCTTCAATGCTTG+TGG | + | chr1_1:4528575-4528594 | None:intergenic | 40.0% | |
!! | CTCTTCAATTCTAGGGTTCT+TGG | + | chr1_1:4528695-4528714 | None:intergenic | 40.0% |
CAGCTTTCATGTTCAGATCA+AGG | + | chr1_1:4528798-4528817 | None:intergenic | 40.0% | |
GAACATGAAAGCTGATGAAG+AGG | - | chr1_1:4528804-4528823 | Msa0002580:CDS | 40.0% | |
AAAGCTGATGAAGAGGAAGA+TGG | - | chr1_1:4528811-4528830 | Msa0002580:CDS | 40.0% | |
GGGTCATTTGAAGATGTTTG+TGG | - | chr1_1:4528985-4529004 | Msa0002580:CDS | 40.0% | |
GTGATTGAAGACATGTGTGT+GGG | - | chr1_1:4529045-4529064 | Msa0002580:CDS | 40.0% | |
TGATTGAAGACATGTGTGTG+GGG | - | chr1_1:4529046-4529065 | Msa0002580:CDS | 40.0% | |
AGAAATTGGGATTGGGATAG+TGG | - | chr1_1:4529192-4529211 | Msa0002580:CDS | 40.0% | |
GAAATTGGGATTGGGATAGT+GGG | - | chr1_1:4529193-4529212 | Msa0002580:CDS | 40.0% | |
! | AGACAAAGAGGGAAGTGTAG+TGG | - | chr1_1:4525935-4525954 | Msa0002580:three_prime_UTR | 45.0% |
! | GACAAAGAGGGAAGTGTAGT+GGG | - | chr1_1:4525936-4525955 | Msa0002580:three_prime_UTR | 45.0% |
! | ACAAAGAGGGAAGTGTAGTG+GGG | - | chr1_1:4525937-4525956 | Msa0002580:three_prime_UTR | 45.0% |
GAAGGCTGAGAGTGAATCAA+AGG | + | chr1_1:4526256-4526275 | None:intergenic | 45.0% | |
! | CAATGCAGCAATGAGAGCAT+TGG | + | chr1_1:4526284-4526303 | None:intergenic | 45.0% |
GCACAAGCTCATCAAAGAAG+AGG | - | chr1_1:4526310-4526329 | Msa0002580:CDS | 45.0% | |
AGTAGGGTTATGAGAGAAGC+TGG | - | chr1_1:4526430-4526449 | Msa0002580:CDS | 45.0% | |
! | ACTGAGTTGACGAGTACATC+AGG | - | chr1_1:4526697-4526716 | Msa0002580:CDS | 45.0% |
!! | GTTCTGAGAGATGCTCATCT+TGG | + | chr1_1:4527390-4527409 | None:intergenic | 45.0% |
! | TGCCCCTATTCCAGTGATTT+TGG | + | chr1_1:4527859-4527878 | None:intergenic | 45.0% |
GAATCGAGGTGTAAGATTGG+AGG | + | chr1_1:4527933-4527952 | None:intergenic | 45.0% | |
ACGGAATCGAGGTGTAAGAT+TGG | + | chr1_1:4527936-4527955 | None:intergenic | 45.0% | |
!! | CAATGGTGCTGCATGATTGT+TGG | + | chr1_1:4527961-4527980 | None:intergenic | 45.0% |
CTCTTGGGGCTCAAGAAATT+AGG | + | chr1_1:4528643-4528662 | None:intergenic | 45.0% | |
GGTGATTGAAGACATGTGTG+TGG | - | chr1_1:4529044-4529063 | Msa0002580:CDS | 45.0% | |
! | AACAGTTAACTTGGGAGGGA+AGG | - | chr1_1:4529134-4529153 | Msa0002580:CDS | 45.0% |
!! | GGATTGGGATAGTGGGTTTA+TGG | - | chr1_1:4529200-4529219 | Msa0002580:CDS | 45.0% |
! | CAAAGAGGGAAGTGTAGTGG+GGG | - | chr1_1:4525938-4525957 | Msa0002580:three_prime_UTR | 50.0% |
! | AAAGAGGGAAGTGTAGTGGG+GGG | - | chr1_1:4525939-4525958 | Msa0002580:three_prime_UTR | 50.0% |
TATCAAGTGATGCGCTCAGG+AGG | - | chr1_1:4525968-4525987 | Msa0002580:exon | 50.0% | |
!! | CTTGTGTTGGCTAGAAGGAG+AGG | - | chr1_1:4526046-4526065 | Msa0002580:CDS | 50.0% |
TAGAAGGAGAGGTCATCCAC+AGG | - | chr1_1:4526057-4526076 | Msa0002580:CDS | 50.0% | |
ACATGTAGAGGAGTGACCTG+TGG | + | chr1_1:4526076-4526095 | None:intergenic | 50.0% | |
TTGCTGCTGCTGCTGTTCTA+TGG | + | chr1_1:4526338-4526357 | None:intergenic | 50.0% | |
GAGTTGACGAGTACATCAGG+TGG | - | chr1_1:4526700-4526719 | Msa0002580:CDS | 50.0% | |
! | ACGAGTACATCAGGTGGACT+TGG | - | chr1_1:4526706-4526725 | Msa0002580:CDS | 50.0% |
GCTTGACCCTTCATTCTTCC+AGG | - | chr1_1:4526728-4526747 | Msa0002580:CDS | 50.0% | |
GCTCAATTTCTCAGACCTGC+AGG | - | chr1_1:4527509-4527528 | Msa0002580:intron | 50.0% | |
CCATGAGACTGAAGCCAGAA+AGG | + | chr1_1:4527551-4527570 | None:intergenic | 50.0% | |
!! | CCTTTCTGGCTTCAGTCTCA+TGG | - | chr1_1:4527548-4527567 | Msa0002580:intron | 50.0% |
TGCTGCATGATTGTTGGCGA+CGG | + | chr1_1:4527955-4527974 | None:intergenic | 50.0% | |
! | GTTAACTTGGGAGGGAAGGA+AGG | - | chr1_1:4529138-4529157 | Msa0002580:CDS | 50.0% |
TGAAGCAGCCTCTGCTGTGA+GGG | + | chr1_1:4526011-4526030 | None:intergenic | 55.0% | |
GATTGTTGGCGACGGAATCG+AGG | + | chr1_1:4527947-4527966 | None:intergenic | 55.0% | |
CTGAAGCAGCCTCTGCTGTG+AGG | + | chr1_1:4526012-4526031 | None:intergenic | 60.0% | |
GCAGCAGACCCTCACAGCAG+AGG | - | chr1_1:4526000-4526019 | Msa0002580:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 4525823 | 4529417 | 4525823 | ID=Msa0002580;Name=Msa0002580 |
chr1_1 | mRNA | 4525823 | 4529417 | 4525823 | ID=Msa0002580-mRNA-1;Parent=Msa0002580;Name=Msa0002580-mRNA-1;_AED=0.03;_eAED=0.03;_QI=154|1|1|1|1|1|3|148|822 |
chr1_1 | exon | 4525823 | 4527452 | 4525823 | ID=Msa0002580-mRNA-1:exon:1420;Parent=Msa0002580-mRNA-1 |
chr1_1 | exon | 4527651 | 4527864 | 4527651 | ID=Msa0002580-mRNA-1:exon:1419;Parent=Msa0002580-mRNA-1 |
chr1_1 | exon | 4528491 | 4529417 | 4528491 | ID=Msa0002580-mRNA-1:exon:1418;Parent=Msa0002580-mRNA-1 |
chr1_1 | five_prime_UTR | 4529264 | 4529417 | 4529264 | ID=Msa0002580-mRNA-1:five_prime_utr;Parent=Msa0002580-mRNA-1 |
chr1_1 | CDS | 4528491 | 4529263 | 4528491 | ID=Msa0002580-mRNA-1:cds;Parent=Msa0002580-mRNA-1 |
chr1_1 | CDS | 4527651 | 4527864 | 4527651 | ID=Msa0002580-mRNA-1:cds;Parent=Msa0002580-mRNA-1 |
chr1_1 | CDS | 4525971 | 4527452 | 4525971 | ID=Msa0002580-mRNA-1:cds;Parent=Msa0002580-mRNA-1 |
chr1_1 | three_prime_UTR | 4525823 | 4525970 | 4525823 | ID=Msa0002580-mRNA-1:three_prime_utr;Parent=Msa0002580-mRNA-1 |
Gene Sequence |
Protein sequence |