AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1225860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225860 MtrunA17_Chr7g0246721 100.000 236 0 0 1 236 1 236 3.79e-174 478
Msa1225860 MtrunA17_Chr4g0021011 26.906 223 146 7 14 227 19 233 1.27e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225860 AT1G01820.1 80.342 234 45 1 1 234 1 233 2.73e-141 395
Msa1225860 AT2G45740.2 78.319 226 49 0 2 227 3 228 3.97e-137 385
Msa1225860 AT2G45740.3 78.319 226 49 0 2 227 3 228 3.97e-137 385
Msa1225860 AT2G45740.1 78.319 226 49 0 2 227 3 228 3.97e-137 385
Msa1225860 AT3G61070.2 77.533 227 47 1 1 227 1 223 6.75e-132 371
Msa1225860 AT3G61070.3 77.533 227 47 1 1 227 1 223 6.75e-132 371
Msa1225860 AT3G61070.1 77.533 227 47 1 1 227 1 223 6.75e-132 371

Find 81 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGGAGCTTGGAAGACTTTC+TGG 0.141997 8_1:+91424635 Msa1225860:CDS
ATACCTTTCCCAACAGAATT+AGG 0.150440 8_1:-91424165 None:intergenic
TTCTCCATTACTCAAGAATT+TGG 0.176496 8_1:-91423699 None:intergenic
TTCTCTTCTATATCTCTTAC+AGG 0.263414 8_1:+91421328 Msa1225860:five_prime_UTR
TAATAATCGAAGGAGTTTAA+AGG 0.284321 8_1:-91426090 None:intergenic
TACCTTTCCCAACAGAATTA+GGG 0.287612 8_1:-91424164 None:intergenic
CCCCGTGTTACCGGGGCATT+TGG 0.290157 8_1:+91424924 Msa1225860:CDS
GATTTCTCTCTACTGTTGGC+TGG 0.307117 8_1:+91424461 Msa1225860:CDS
ACCAAATCCGAACAATAAAA+TGG 0.314411 8_1:-91426067 None:intergenic
ATCTCTAATATCTTGCTATC+AGG 0.317696 8_1:+91424956 Msa1225860:CDS
AAAGTCACTCCCCGTGTTAC+CGG 0.327800 8_1:+91424915 Msa1225860:CDS
AATAATTGTATGAATTTGTC+AGG 0.366684 8_1:+91425977 Msa1225860:three_prime_UTR
AGTGGACAGCAATGCATTCT+TGG 0.368945 8_1:-91424267 None:intergenic
AATTGTGATAAGGGCTTGTT+TGG 0.369566 8_1:-91421307 None:intergenic
GTAGAAAACAAGGCCCTGTT+TGG 0.375092 8_1:+91426029 Msa1225860:three_prime_UTR
TTCTGAAAACAAGTCCAAAC+AGG 0.392617 8_1:-91426043 None:intergenic
AGGGGTGTACCCTGTGGTGA+TGG 0.409784 8_1:-91424139 None:intergenic
TATAGAAGAGAATTGTGATA+AGG 0.410288 8_1:-91421317 None:intergenic
GCCGGATTTCTCTCTACTGT+TGG 0.411303 8_1:+91424457 Msa1225860:CDS
CCAACACTACTTCATTTCTT+CGG 0.411703 8_1:+91421391 Msa1225860:five_prime_UTR
ATAGAAGAGAATTGTGATAA+GGG 0.415655 8_1:-91421316 None:intergenic
CTTGATCAATTTGTGTGGCT+TGG 0.417533 8_1:+91424299 Msa1225860:CDS
AGCGAGAAGAAAGAATGAAA+TGG 0.419846 8_1:-91421352 None:intergenic
ATTTGTCAGGAGATATTAAT+CGG 0.436679 8_1:+91425990 Msa1225860:three_prime_UTR
ATATGCAGAGCGATACAATA+TGG 0.438108 8_1:+91423674 Msa1225860:CDS
TGAGCAATGAAAGAATAAAC+TGG 0.445436 8_1:+91425929 Msa1225860:exon
TTTGATTAGCTCGGGGAGCT+TGG 0.445739 8_1:+91424623 Msa1225860:intron
AATATGTACCTCCTTGGTTG+AGG 0.447824 8_1:+91424491 Msa1225860:CDS
TTCCTCAATATGTACCTCCT+TGG 0.461177 8_1:+91424485 Msa1225860:CDS
TTTGTGTGGCTTGGCAGAAC+CGG 0.466339 8_1:+91424308 Msa1225860:CDS
AGAAATCCGGCCAACTAGTT+CGG 0.469145 8_1:-91424445 None:intergenic
GGTTCCAAATTCTTGAGTAA+TGG 0.475299 8_1:+91423695 Msa1225860:CDS
AACACGGGGAGTGACTTTCT+CGG 0.476441 8_1:-91424910 None:intergenic
TCAACATTCTGCGCTTTACC+AGG 0.477818 8_1:-91423722 None:intergenic
GCGAGAAGAAAGAATGAAAT+GGG 0.482793 8_1:-91421351 None:intergenic
AAGTCACTCCCCGTGTTACC+GGG 0.483116 8_1:+91424916 Msa1225860:CDS
ATTTCTCTCTACTGTTGGCT+GGG 0.484195 8_1:+91424462 Msa1225860:CDS
ATCCAAATGCCCCGGTAACA+CGG 0.484737 8_1:-91424926 None:intergenic
TCCAAATGCCCCGGTAACAC+GGG 0.487559 8_1:-91424925 None:intergenic
TCAGGAGATATTAATCGGTA+TGG 0.487639 8_1:+91425995 Msa1225860:three_prime_UTR
ACACGGGGAGTGACTTTCTC+GGG 0.492261 8_1:-91424909 None:intergenic
GATGCAACCAGGGCAGAACT+TGG 0.500278 8_1:+91423608 Msa1225860:CDS
TTGATCAAGAAACAAGAAAG+TGG 0.509019 8_1:-91424285 None:intergenic
TTTATATTTGAACAAGGCTG+AGG 0.519097 8_1:+91423640 Msa1225860:CDS
CCGAAGAAATGAAGTAGTGT+TGG 0.526876 8_1:-91421391 None:intergenic
TTTGAACAAGGCTGAGGCAA+GGG 0.529250 8_1:+91423646 Msa1225860:CDS
AACCAAGGAGGTACATATTG+AGG 0.535412 8_1:-91424487 None:intergenic
TATATATTTATAATAATCGA+AGG 0.536641 8_1:-91426100 None:intergenic
ACTCTTTCACTCATCAAAGC+AGG 0.538753 8_1:+91424846 Msa1225860:CDS
TTCTTGAGTAATGGAGAACC+TGG 0.539146 8_1:+91423704 Msa1225860:CDS
TGAGCACATTGGATGCAACC+AGG 0.549904 8_1:+91423597 Msa1225860:CDS
AAGAAGGCCAAGTTCTGCCC+TGG 0.549964 8_1:-91423615 None:intergenic
TAACAACAAAGAAGCATGAC+GGG 0.550344 8_1:-91425954 None:intergenic
TGTTTCTTGATCAATTTGTG+TGG 0.551401 8_1:+91424294 Msa1225860:CDS
AGCAGTTGGACTGCTTCAGT+TGG 0.552071 8_1:+91424884 Msa1225860:CDS
TCTGATAAGTCCATCACCAC+AGG 0.563882 8_1:+91424129 Msa1225860:CDS
ATTTGAACAAGGCTGAGGCA+AGG 0.577561 8_1:+91423645 Msa1225860:CDS
GCCAACAGTAGAGAGAAATC+CGG 0.577756 8_1:-91424458 None:intergenic
ATTTCTTACGTCGATGACAC+CGG 0.577930 8_1:-91424327 None:intergenic
AGCGTACCGAACTAGTTGGC+CGG 0.581306 8_1:+91424439 Msa1225860:CDS
CAGTGATTACTAATTAGCAT+TGG 0.583055 8_1:+91423571 Msa1225860:intron
AAAGAGCGTACCGAACTAGT+TGG 0.593530 8_1:+91424435 Msa1225860:CDS
AGCATTGGAAATGAGCACAT+TGG 0.594687 8_1:+91423586 Msa1225860:exon
TGTTCAAATATAAAACAAGA+AGG 0.596092 8_1:-91423631 None:intergenic
TGAAACAAATCCAAATGCCC+CGG 0.597552 8_1:-91424934 None:intergenic
ACCTTTCCCAACAGAATTAG+GGG 0.608517 8_1:-91424163 None:intergenic
GAGCACATTGGATGCAACCA+GGG 0.617935 8_1:+91423598 Msa1225860:CDS
TTTCGTCTTAGTAGAAAACA+AGG 0.619200 8_1:+91426019 Msa1225860:three_prime_UTR
ATTGATACAGTGGTAGCAGT+TGG 0.619234 8_1:+91424870 Msa1225860:CDS
GATGCAGAATGAGCAATACC+AGG 0.621633 8_1:+91424797 Msa1225860:intron
ATGGACTTATCAGAGCATGC+AGG 0.623130 8_1:-91424120 None:intergenic
TTAACAACAAAGAAGCATGA+CGG 0.626271 8_1:-91425955 None:intergenic
AGTCACTCCCCGTGTTACCG+GGG 0.628907 8_1:+91424917 Msa1225860:CDS
CAAAGCAGGCATTGATACAG+TGG 0.634472 8_1:+91424860 Msa1225860:CDS
TCTGAAAACAAGTCCAAACA+GGG 0.648243 8_1:-91426042 None:intergenic
CCAAATGCCCCGGTAACACG+GGG 0.648543 8_1:-91424924 None:intergenic
TTTGACTTAGCTGAGGCAGG+AGG 0.665448 8_1:-91425899 None:intergenic
CTGATAAGTCCATCACCACA+GGG 0.670101 8_1:+91424130 Msa1225860:CDS
CCTTTCCCAACAGAATTAGG+GGG 0.673035 8_1:-91424162 None:intergenic
TAAGCCACAAACCTCAACCA+AGG 0.690033 8_1:-91424502 None:intergenic
GCCACAAACCTCAACCAAGG+AGG 0.724104 8_1:-91424499 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATATGAATTTTAATTG+TGG + chr8_1:91421810-91421829 Msa1225860:intron 10.0%
!! AAATAAATTAAAGATTGAAA+AGG - chr8_1:91424214-91424233 None:intergenic 10.0%
!! TATATATTTATAATAATCGA+AGG - chr8_1:91426103-91426122 None:intergenic 10.0%
!! AAAAGTAAAAGAAAAAATCA+CGG - chr8_1:91421443-91421462 None:intergenic 15.0%
!! CATGTTTATATATACATTAA+CGG - chr8_1:91421874-91421893 None:intergenic 15.0%
!! ATGATTATAGATAAGAAAAA+AGG + chr8_1:91422431-91422450 Msa1225860:intron 15.0%
!! TAATACATCCAATAAAAATA+GGG + chr8_1:91422984-91423003 Msa1225860:intron 15.0%
!!! ACTTTTTCTGATATTTTAAA+TGG + chr8_1:91423157-91423176 Msa1225860:intron 15.0%
!! TTATTACATGAACTAATTAA+TGG - chr8_1:91424068-91424087 None:intergenic 15.0%
!! AAAAAAGTGAAGAAATAAAA+AGG - chr8_1:91424578-91424597 None:intergenic 15.0%
!! AAAGTAAAAGAAAAAATCAC+GGG - chr8_1:91421442-91421461 None:intergenic 20.0%
!!! ACAAAAGTTCAAATCTTTTA+AGG + chr8_1:91421529-91421548 Msa1225860:intron 20.0%
!!! AATTTTATGATTTGCTTTGA+TGG + chr8_1:91421637-91421656 Msa1225860:intron 20.0%
!! CGTTAATGTATATATAAACA+TGG + chr8_1:91421872-91421891 Msa1225860:intron 20.0%
!!! TAAATTCTAAAACATAGGTT+TGG - chr8_1:91422040-91422059 None:intergenic 20.0%
!!! TAATTTTCTCAATTTACTAC+CGG + chr8_1:91422293-91422312 Msa1225860:intron 20.0%
!!! CTTATTATTTTTCACTTGAT+GGG - chr8_1:91422735-91422754 None:intergenic 20.0%
!!! CTATTTTTATTGGATGTATT+AGG - chr8_1:91422985-91423004 None:intergenic 20.0%
!! CTAATACATCCAATAAAAAT+AGG + chr8_1:91422983-91423002 Msa1225860:intron 20.0%
!! TGTTCAAATATAAAACAAGA+AGG - chr8_1:91423634-91423653 None:intergenic 20.0%
!!! TCTTGTTTTATATTTGAACA+AGG + chr8_1:91423634-91423653 Msa1225860:CDS 20.0%
!! TTTAAACAAATCAATCATAG+AGG - chr8_1:91423885-91423904 None:intergenic 20.0%
!! TATGCTTAATATTCTTTGTT+CGG + chr8_1:91423922-91423941 Msa1225860:intron 20.0%
!! AAAAAAATCAACAAGACATT+AGG - chr8_1:91424238-91424257 None:intergenic 20.0%
!!! TATGCAGATACAAAATTTTA+GGG - chr8_1:91425034-91425053 None:intergenic 20.0%
!! TATAAAGAAGTTTCAACATA+GGG + chr8_1:91425392-91425411 Msa1225860:intron 20.0%
!! AATAATTGTATGAATTTGTC+AGG + chr8_1:91425977-91425996 Msa1225860:three_prime_UTR 20.0%
! ATAGAAGAGAATTGTGATAA+GGG - chr8_1:91421319-91421338 None:intergenic 25.0%
! TATAGAAGAGAATTGTGATA+AGG - chr8_1:91421320-91421339 None:intergenic 25.0%
! AAGTAAAAGAAAAAATCACG+GGG - chr8_1:91421441-91421460 None:intergenic 25.0%
!! TTTTGTATCTGAAAACAACT+GGG - chr8_1:91421515-91421534 None:intergenic 25.0%
!!! AAAGTTCAAATCTTTTAAGG+TGG + chr8_1:91421532-91421551 Msa1225860:intron 25.0%
!!! AAGTTCAAATCTTTTAAGGT+GGG + chr8_1:91421533-91421552 Msa1225860:intron 25.0%
! AGGATTTGATAGATATCATA+AGG - chr8_1:91421998-91422017 None:intergenic 25.0%
!!! CACTCTAAATTCTAAAACAT+AGG - chr8_1:91422045-91422064 None:intergenic 25.0%
! GTGTCTTCAATCTTTATTAT+CGG - chr8_1:91422088-91422107 None:intergenic 25.0%
!!! ACGTCTGAAATCTTTATTTT+TGG - chr8_1:91422237-91422256 None:intergenic 25.0%
!!! GCTTATTATTTTTCACTTGA+TGG - chr8_1:91422736-91422755 None:intergenic 25.0%
! TTGAACATTGTTTGTAAGAT+TGG + chr8_1:91422807-91422826 Msa1225860:intron 25.0%
!! CAAAATGCTGATAATTTTCT+AGG - chr8_1:91423372-91423391 None:intergenic 25.0%
!!! AATTTTTGATAGTAGCTTTG+TGG + chr8_1:91423393-91423412 Msa1225860:intron 25.0%
!! TAGTTTAACAATTTTGTTCG+TGG + chr8_1:91423431-91423450 Msa1225860:intron 25.0%
!! ACTCTTTAAAAACAATGCTA+TGG + chr8_1:91423473-91423492 Msa1225860:intron 25.0%
!! AAAAGTTTTTCGTCTATTCA+AGG + chr8_1:91423766-91423785 Msa1225860:CDS 25.0%
! CACACAAAAAAAAGGATAAA+TGG - chr8_1:91423830-91423849 None:intergenic 25.0%
!! TTCCAATATATTTTCTGACA+TGG + chr8_1:91424031-91424050 Msa1225860:intron 25.0%
! TTCCATGTCAGAAAATATAT+TGG - chr8_1:91424036-91424055 None:intergenic 25.0%
! ATAATACAGAAGCAAACAAA+AGG - chr8_1:91424370-91424389 None:intergenic 25.0%
!! AAGAAATAAAAAGGCATGAT+TGG - chr8_1:91424569-91424588 None:intergenic 25.0%
! ACACATAAAATGTCATACAT+AGG - chr8_1:91424604-91424623 None:intergenic 25.0%
!!! TTTTATGTGTTTGATTAGCT+CGG + chr8_1:91424614-91424633 Msa1225860:intron 25.0%
! TTCCTTACCTTTATTACTTA+TGG + chr8_1:91424775-91424794 Msa1225860:intron 25.0%
! ATCCATAAGTAATAAAGGTA+AGG - chr8_1:91424780-91424799 None:intergenic 25.0%
!!! CTCATTTGATTTTTTTAGCT+TGG - chr8_1:91424823-91424842 None:intergenic 25.0%
! AGCTAAAAAAATCAAATGAG+AGG + chr8_1:91424823-91424842 Msa1225860:CDS 25.0%
!!! AGTTTGCTTCTTATTTTTCT+TGG + chr8_1:91425005-91425024 Msa1225860:intron 25.0%
!! GTATGCAGATACAAAATTTT+AGG - chr8_1:91425035-91425054 None:intergenic 25.0%
! AAAAATACCCAGAGTAAAAA+AGG - chr8_1:91425240-91425259 None:intergenic 25.0%
! CTATAAAGAAGTTTCAACAT+AGG + chr8_1:91425391-91425410 Msa1225860:intron 25.0%
! AAAATGCTACAACAAGATAA+CGG - chr8_1:91425431-91425450 None:intergenic 25.0%
!!! TTATCTTGTTGTAGCATTTT+CGG + chr8_1:91425431-91425450 Msa1225860:intron 25.0%
! AAAACTCGTTTATACTATCA+GGG - chr8_1:91425607-91425626 None:intergenic 25.0%
! TAAAACTCGTTTATACTATC+AGG - chr8_1:91425608-91425627 None:intergenic 25.0%
!! TAGTATAAACGAGTTTTACA+CGG + chr8_1:91425610-91425629 Msa1225860:intron 25.0%
! GATAGTGACATATAATTGAA+CGG - chr8_1:91425636-91425655 None:intergenic 25.0%
! AATATTGTGATGTATCATGA+TGG + chr8_1:91425686-91425705 Msa1225860:intron 25.0%
! GAAAATGCAAATAAATACAG+AGG - chr8_1:91425727-91425746 None:intergenic 25.0%
! ATTTGTCAGGAGATATTAAT+CGG + chr8_1:91425990-91426009 Msa1225860:three_prime_UTR 25.0%
!! TCAGAAACCATTTTATTGTT+CGG + chr8_1:91426060-91426079 Msa1225860:three_prime_UTR 25.0%
! TAATAATCGAAGGAGTTTAA+AGG - chr8_1:91426093-91426112 None:intergenic 25.0%
TTCTCTTCTATATCTCTTAC+AGG + chr8_1:91421328-91421347 Msa1225860:five_prime_UTR 30.0%
TTTGTATCTGAAAACAACTG+GGG - chr8_1:91421514-91421533 None:intergenic 30.0%
! CTTTTGTATCTGAAAACAAC+TGG - chr8_1:91421516-91421535 None:intergenic 30.0%
!!! AGTTCAAATCTTTTAAGGTG+GGG + chr8_1:91421534-91421553 Msa1225860:intron 30.0%
!!! GGTATGCCAATTTTGATTTT+GGG + chr8_1:91421555-91421574 Msa1225860:intron 30.0%
CAGTTTGAGAAATCTGAATT+CGG - chr8_1:91421608-91421627 None:intergenic 30.0%
GAATTCAGATTTCTCAAACT+GGG + chr8_1:91421607-91421626 Msa1225860:intron 30.0%
!! TATGATTTGCTTTGATGGAT+TGG + chr8_1:91421642-91421661 Msa1225860:intron 30.0%
GATGTGATTGTTTGTAACAT+AGG + chr8_1:91421755-91421774 Msa1225860:intron 30.0%
TGATTGTTTGTAACATAGGA+AGG + chr8_1:91421759-91421778 Msa1225860:intron 30.0%
TGATGCACTTATTTGCTTAT+TGG + chr8_1:91421904-91421923 Msa1225860:intron 30.0%
ATAATTGAACGTAACCAGAT+GGG - chr8_1:91422123-91422142 None:intergenic 30.0%
AATAATTGAACGTAACCAGA+TGG - chr8_1:91422124-91422143 None:intergenic 30.0%
! TCATTTTCTCAAGTTACTAC+TGG + chr8_1:91422144-91422163 Msa1225860:intron 30.0%
TATCTCCTAAAAATCATCCT+CGG - chr8_1:91422660-91422679 None:intergenic 30.0%
! TGTCTTTTGTCATAAACAAG+AGG - chr8_1:91422684-91422703 None:intergenic 30.0%
TTGTTTATGACAAAAGACAG+AGG + chr8_1:91422685-91422704 Msa1225860:intron 30.0%
! TATTTTTCACTTGATGGGAT+TGG - chr8_1:91422730-91422749 None:intergenic 30.0%
TTTGTAAGATTGGATTACCA+CGG + chr8_1:91422817-91422836 Msa1225860:intron 30.0%
AATGAAATCAAACTGGGTTT+GGG + chr8_1:91422912-91422931 Msa1225860:intron 30.0%
GTAGAGTAGAAAATTAACGT+AGG + chr8_1:91422959-91422978 Msa1225860:intron 30.0%
!!! ATGAAGCACCCTATTTTTAT+TGG - chr8_1:91422995-91423014 None:intergenic 30.0%
TTTAAATGGAGTTTCTCCAT+TGG + chr8_1:91423171-91423190 Msa1225860:intron 30.0%
TTGTCTTAACTAAGTTCTCA+TGG + chr8_1:91423328-91423347 Msa1225860:intron 30.0%
CAGTGATTACTAATTAGCAT+TGG + chr8_1:91423571-91423590 Msa1225860:intron 30.0%
TTTATATTTGAACAAGGCTG+AGG + chr8_1:91423640-91423659 Msa1225860:CDS 30.0%
TTCTCCATTACTCAAGAATT+TGG - chr8_1:91423702-91423721 None:intergenic 30.0%
! TTTTTCGTCTATTCAAGGTT+AGG + chr8_1:91423771-91423790 Msa1225860:intron 30.0%
AAAATGGGCACACAAAAAAA+AGG - chr8_1:91423838-91423857 None:intergenic 30.0%
!!! TTTTTTTTGTGTGCCCATTT+TGG + chr8_1:91423837-91423856 Msa1225860:intron 30.0%
TATAAAGCGTGTACCAAAAT+GGG - chr8_1:91423853-91423872 None:intergenic 30.0%
TTATAAAGCGTGTACCAAAA+TGG - chr8_1:91423854-91423873 None:intergenic 30.0%
! GGAAAGGTATGATATTTCTT+AGG + chr8_1:91424178-91424197 Msa1225860:intron 30.0%
TTGATCAAGAAACAAGAAAG+TGG - chr8_1:91424288-91424307 None:intergenic 30.0%
TGTTTCTTGATCAATTTGTG+TGG + chr8_1:91424294-91424313 Msa1225860:CDS 30.0%
TTATCATCCAACACTATACA+CGG + chr8_1:91424389-91424408 Msa1225860:intron 30.0%
ATAAAATCCGTGTATAGTGT+TGG - chr8_1:91424399-91424418 None:intergenic 30.0%
! TATATTTGTTAGCATCAACG+AGG - chr8_1:91424540-91424559 None:intergenic 30.0%
! TTTATGTGTTTGATTAGCTC+GGG + chr8_1:91424615-91424634 Msa1225860:intron 30.0%
GAAGAATTTATACACATGCA+TGG - chr8_1:91424719-91424738 None:intergenic 30.0%
! TTTCTGTCTTTGGTTTACTT+TGG + chr8_1:91424743-91424762 Msa1225860:intron 30.0%
! TTCTGTCTTTGGTTTACTTT+GGG + chr8_1:91424744-91424763 Msa1225860:intron 30.0%
TCTGCATCCATAAGTAATAA+AGG - chr8_1:91424785-91424804 None:intergenic 30.0%
! ATCTCTAATATCTTGCTATC+AGG + chr8_1:91424956-91424975 Msa1225860:CDS 30.0%
TCCCTTACAGTTTAAACATT+AGG + chr8_1:91425214-91425233 Msa1225860:intron 30.0%
GCCTAATGTTTAAACTGTAA+GGG - chr8_1:91425218-91425237 None:intergenic 30.0%
TTTCACAATTAAAAACCACC+AGG + chr8_1:91425264-91425283 Msa1225860:intron 30.0%
!! TATCTTGTTGTAGCATTTTC+GGG + chr8_1:91425432-91425451 Msa1225860:intron 30.0%
TCGTTCATTAGTTGTGTAAA+AGG - chr8_1:91425506-91425525 None:intergenic 30.0%
! TTTTACACAACTAATGAACG+AGG + chr8_1:91425505-91425524 Msa1225860:intron 30.0%
TGAGCAATGAAAGAATAAAC+TGG + chr8_1:91425929-91425948 Msa1225860:exon 30.0%
! TTAACAACAAAGAAGCATGA+CGG - chr8_1:91425958-91425977 None:intergenic 30.0%
TTTCGTCTTAGTAGAAAACA+AGG + chr8_1:91426019-91426038 Msa1225860:three_prime_UTR 30.0%
! ACCATTTTATTGTTCGGATT+TGG + chr8_1:91426066-91426085 Msa1225860:three_prime_UTR 30.0%
ACCAAATCCGAACAATAAAA+TGG - chr8_1:91426070-91426089 None:intergenic 30.0%
! AATTGTGATAAGGGCTTGTT+TGG - chr8_1:91421310-91421329 None:intergenic 35.0%
GCGAGAAGAAAGAATGAAAT+GGG - chr8_1:91421354-91421373 None:intergenic 35.0%
AGCGAGAAGAAAGAATGAAA+TGG - chr8_1:91421355-91421374 None:intergenic 35.0%
CCAACACTACTTCATTTCTT+CGG + chr8_1:91421391-91421410 Msa1225860:five_prime_UTR 35.0%
!!! GGGTATGCCAATTTTGATTT+TGG + chr8_1:91421554-91421573 Msa1225860:intron 35.0%
AGCTGACCCAAAATCAAAAT+TGG - chr8_1:91421564-91421583 None:intergenic 35.0%
CGAATTCAGATTTCTCAAAC+TGG + chr8_1:91421606-91421625 Msa1225860:intron 35.0%
! AGAGAGGAAGATTGTTCTTT+TGG + chr8_1:91421946-91421965 Msa1225860:intron 35.0%
! GAGAGGAAGATTGTTCTTTT+GGG + chr8_1:91421947-91421966 Msa1225860:intron 35.0%
GGTGGGTGAATTTAAATAAG+TGG + chr8_1:91421968-91421987 Msa1225860:intron 35.0%
!! CTTTATTATCGGTGCTACAT+AGG - chr8_1:91422077-91422096 None:intergenic 35.0%
TAAGTAGTACCTATGAAGCA+CGG - chr8_1:91422348-91422367 None:intergenic 35.0%
TTCCAACTGAGACTACAATA+GGG - chr8_1:91422569-91422588 None:intergenic 35.0%
TATTGTAGTCTCAGTTGGAA+GGG + chr8_1:91422569-91422588 Msa1225860:intron 35.0%
AGTTGGAAGGGATGTTATAA+TGG + chr8_1:91422581-91422600 Msa1225860:intron 35.0%
GAAACATAAAGATACAACCG+AGG - chr8_1:91422638-91422657 None:intergenic 35.0%
GTTGTATCTTTATGTTTCCG+AGG + chr8_1:91422640-91422659 Msa1225860:intron 35.0%
! TGTTTCCGAGGATGATTTTT+AGG + chr8_1:91422652-91422671 Msa1225860:intron 35.0%
!!! ATAAGCCTTTTGTTGTTGAC+AGG + chr8_1:91422750-91422769 Msa1225860:intron 35.0%
!!! TAAGCCTTTTGTTGTTGACA+GGG + chr8_1:91422751-91422770 Msa1225860:intron 35.0%
TAATCCCTGTCAACAACAAA+AGG - chr8_1:91422758-91422777 None:intergenic 35.0%
TGTTGTTGACAGGGATTAAT+TGG + chr8_1:91422760-91422779 Msa1225860:intron 35.0%
AAGTTGGGAAATATCTTGCA+AGG + chr8_1:91422849-91422868 Msa1225860:intron 35.0%
GGAAATATCTTGCAAGGAAT+GGG + chr8_1:91422855-91422874 Msa1225860:intron 35.0%
ACCTTCCAATGAAATCAAAC+TGG + chr8_1:91422905-91422924 Msa1225860:intron 35.0%
CCTTCCAATGAAATCAAACT+GGG + chr8_1:91422906-91422925 Msa1225860:intron 35.0%
! CAAACCCAGTTTGATTTCAT+TGG - chr8_1:91422913-91422932 None:intergenic 35.0%
CAATGAAATCAAACTGGGTT+TGG + chr8_1:91422911-91422930 Msa1225860:intron 35.0%
CATAACAAAAATCAGCCTTC+AGG - chr8_1:91423040-91423059 None:intergenic 35.0%
ATGTTTAGTCCCTTGATTGA+AGG + chr8_1:91423057-91423076 Msa1225860:intron 35.0%
GCTGAGTCAATAAATGACAA+TGG + chr8_1:91423079-91423098 Msa1225860:intron 35.0%
AGTTTCTCCATTGGATTTGA+TGG + chr8_1:91423180-91423199 Msa1225860:intron 35.0%
CCATAAACAAAATCACAGCA+CGG - chr8_1:91423551-91423570 None:intergenic 35.0%
ATATGCAGAGCGATACAATA+TGG + chr8_1:91423674-91423693 Msa1225860:CDS 35.0%
GGTTCCAAATTCTTGAGTAA+TGG + chr8_1:91423695-91423714 Msa1225860:CDS 35.0%
! AAAAACTTTTCGTGCTAAGC+TGG - chr8_1:91423756-91423775 None:intergenic 35.0%
CTAAGGGACACAAGTATAAA+AGG + chr8_1:91423954-91423973 Msa1225860:intron 35.0%
TACCTTTCCCAACAGAATTA+GGG - chr8_1:91424167-91424186 None:intergenic 35.0%
ATACCTTTCCCAACAGAATT+AGG - chr8_1:91424168-91424187 None:intergenic 35.0%
! TTATGTGTTTGATTAGCTCG+GGG + chr8_1:91424616-91424635 Msa1225860:intron 35.0%
TTCTTCGAAGTTTCTGTCTT+TGG + chr8_1:91424733-91424752 Msa1225860:intron 35.0%
!!! TTGATTTTTTTAGCTTGGCC+TGG - chr8_1:91424818-91424837 None:intergenic 35.0%
GGCCTAATGTTTAAACTGTA+AGG - chr8_1:91425219-91425238 None:intergenic 35.0%
!!! ACATTAGGCCTTTTTTACTC+TGG + chr8_1:91425229-91425248 Msa1225860:intron 35.0%
!!! CATTAGGCCTTTTTTACTCT+GGG + chr8_1:91425230-91425249 Msa1225860:intron 35.0%
!! ACAACAAGATAACGGATAGT+AGG - chr8_1:91425423-91425442 None:intergenic 35.0%
!! ATCTTGTTGTAGCATTTTCG+GGG + chr8_1:91425433-91425452 Msa1225860:intron 35.0%
! TATCCAAGATTTGATGACAC+TGG + chr8_1:91425474-91425493 Msa1225860:intron 35.0%
! TAACAACAAAGAAGCATGAC+GGG - chr8_1:91425957-91425976 None:intergenic 35.0%
TCAGGAGATATTAATCGGTA+TGG + chr8_1:91425995-91426014 Msa1225860:three_prime_UTR 35.0%
TCTGAAAACAAGTCCAAACA+GGG - chr8_1:91426045-91426064 None:intergenic 35.0%
! TTCTGAAAACAAGTCCAAAC+AGG - chr8_1:91426046-91426065 None:intergenic 35.0%
CCGAAGAAATGAAGTAGTGT+TGG - chr8_1:91421394-91421413 None:intergenic 40.0%
!! TTGATTTTGGGTCAGCTTGA+TGG + chr8_1:91421567-91421586 Msa1225860:intron 40.0%
!! TGATTTTGGGTCAGCTTGAT+GGG + chr8_1:91421568-91421587 Msa1225860:intron 40.0%
CAATGATGTGTCATAGAGAG+AGG + chr8_1:91421930-91421949 Msa1225860:intron 40.0%
! AGGAAGATTGTTCTTTTGGG+TGG + chr8_1:91421950-91421969 Msa1225860:intron 40.0%
!! GGAAGATTGTTCTTTTGGGT+GGG + chr8_1:91421951-91421970 Msa1225860:intron 40.0%
GTTCACAAGTTCAAAGGCAA+AGG - chr8_1:91422018-91422037 None:intergenic 40.0%
! GGTTTGGTTCACAAGTTCAA+AGG - chr8_1:91422024-91422043 None:intergenic 40.0%
TGTCTGTGTTAGTGCTTCAT+AGG + chr8_1:91422187-91422206 Msa1225860:intron 40.0%
TTGAACGTAGCAAGATGAGT+TGG - chr8_1:91422268-91422287 None:intergenic 40.0%
AACATCTGACACGTCAAAAC+CGG - chr8_1:91422315-91422334 None:intergenic 40.0%
TCTGTCTCTAGGTGATAACT+TGG - chr8_1:91422474-91422493 None:intergenic 40.0%
GTTCTGTGATTTCTGTCTCT+AGG - chr8_1:91422485-91422504 None:intergenic 40.0%
GAGACAGAAATCACAGAACT+AGG + chr8_1:91422486-91422505 Msa1225860:intron 40.0%
ACAATAGGGCTAAGCTTTCA+AGG - chr8_1:91422555-91422574 None:intergenic 40.0%
CTTCCAACTGAGACTACAAT+AGG - chr8_1:91422570-91422589 None:intergenic 40.0%
CTATTGTAGTCTCAGTTGGA+AGG + chr8_1:91422568-91422587 Msa1225860:intron 40.0%
TGGAAGGGATGTTATAATGG+TGG + chr8_1:91422584-91422603 Msa1225860:intron 40.0%
ATTGGATTACCACGGTATGA+TGG + chr8_1:91422825-91422844 Msa1225860:intron 40.0%
GGGAAATATCTTGCAAGGAA+TGG + chr8_1:91422854-91422873 Msa1225860:intron 40.0%
TCTTGCAAGGAATGGGTATT+TGG + chr8_1:91422862-91422881 Msa1225860:intron 40.0%
! CCCAGTTTGATTTCATTGGA+AGG - chr8_1:91422909-91422928 None:intergenic 40.0%
CAGGTATGAAACTTTCTGCT+AGG - chr8_1:91423021-91423040 None:intergenic 40.0%
GCAGAAAGTTTCATACCTGA+AGG + chr8_1:91423022-91423041 Msa1225860:intron 40.0%
TTGACTCAGCCTTCAATCAA+GGG - chr8_1:91423069-91423088 None:intergenic 40.0%
! ATTGACTCAGCCTTCAATCA+AGG - chr8_1:91423070-91423089 None:intergenic 40.0%
CTTGCAACCATCAAATCCAA+TGG - chr8_1:91423190-91423209 None:intergenic 40.0%
! AGAAGATGTCACTTACACTG+TGG + chr8_1:91423260-91423279 Msa1225860:intron 40.0%
CGGTTCATGTTAAATGAGGA+GGG - chr8_1:91423531-91423550 None:intergenic 40.0%
ACGGTTCATGTTAAATGAGG+AGG - chr8_1:91423532-91423551 None:intergenic 40.0%
AGCACGGTTCATGTTAAATG+AGG - chr8_1:91423535-91423554 None:intergenic 40.0%
!! CCGTGCTGTGATTTTGTTTA+TGG + chr8_1:91423548-91423567 Msa1225860:intron 40.0%
! AGCATTGGAAATGAGCACAT+TGG + chr8_1:91423586-91423605 Msa1225860:exon 40.0%
! TTCTTGAGTAATGGAGAACC+TGG + chr8_1:91423704-91423723 Msa1225860:CDS 40.0%
TTGTTCGGATCTGACTTCTA+AGG + chr8_1:91423937-91423956 Msa1225860:intron 40.0%
TGTTCGGATCTGACTTCTAA+GGG + chr8_1:91423938-91423957 Msa1225860:intron 40.0%
ACCTTTCCCAACAGAATTAG+GGG - chr8_1:91424166-91424185 None:intergenic 40.0%
CTTGATCAATTTGTGTGGCT+TGG + chr8_1:91424299-91424318 Msa1225860:CDS 40.0%
ATTTCTTACGTCGATGACAC+CGG - chr8_1:91424330-91424349 None:intergenic 40.0%
AAGCAAACAAAAGGAGCTGA+TGG - chr8_1:91424361-91424380 None:intergenic 40.0%
! ATTTCTCTCTACTGTTGGCT+GGG + chr8_1:91424462-91424481 Msa1225860:CDS 40.0%
TTCCTCAATATGTACCTCCT+TGG + chr8_1:91424485-91424504 Msa1225860:CDS 40.0%
! AACCAAGGAGGTACATATTG+AGG - chr8_1:91424490-91424509 None:intergenic 40.0%
AATATGTACCTCCTTGGTTG+AGG + chr8_1:91424491-91424510 Msa1225860:CDS 40.0%
ACTCTTTCACTCATCAAAGC+AGG + chr8_1:91424846-91424865 Msa1225860:CDS 40.0%
ATTGATACAGTGGTAGCAGT+TGG + chr8_1:91424870-91424889 Msa1225860:CDS 40.0%
TGAAACAAATCCAAATGCCC+CGG - chr8_1:91424937-91424956 None:intergenic 40.0%
!! TTCTGATAGCTTTAGCAGCT+CGG - chr8_1:91425172-91425191 None:intergenic 40.0%
CTGTGACTAAACTAGTGAGA+GGG - chr8_1:91425328-91425347 None:intergenic 40.0%
TCTGTGACTAAACTAGTGAG+AGG - chr8_1:91425329-91425348 None:intergenic 40.0%
!! AAGATAACGGATAGTAGGCT+GGG - chr8_1:91425418-91425437 None:intergenic 40.0%
ATGACCCTTCAATGATAGAG+GGG - chr8_1:91425795-91425814 None:intergenic 40.0%
CATGACCCTTCAATGATAGA+GGG - chr8_1:91425796-91425815 None:intergenic 40.0%
!!! CGATGTTTTTGACTTAGCTG+AGG - chr8_1:91425909-91425928 None:intergenic 40.0%
!! CGGTGCTACATAGGTTAGTT+AGG - chr8_1:91422068-91422087 None:intergenic 45.0%
TAGGGCTAAGCTTTCAAGGT+TGG - chr8_1:91422551-91422570 None:intergenic 45.0%
AGCCCTATTGTAGTCTCAGT+TGG + chr8_1:91422564-91422583 Msa1225860:intron 45.0%
GATACAACCGAGGTGATATC+TGG - chr8_1:91422628-91422647 None:intergenic 45.0%
! ACTTGATGGGATTGGCAACA+CGG - chr8_1:91422722-91422741 None:intergenic 45.0%
! ACCACGGTATGATGGAAAGT+TGG + chr8_1:91422833-91422852 Msa1225860:intron 45.0%
! CCACGGTATGATGGAAAGTT+GGG + chr8_1:91422834-91422853 Msa1225860:intron 45.0%
CAAGGAATGGGTATTTGGTC+TGG + chr8_1:91422867-91422886 Msa1225860:intron 45.0%
! GATGTCACTTACACTGTGGA+AGG + chr8_1:91423264-91423283 Msa1225860:intron 45.0%
TGAGGAGGGCAATGAGAATT+TGG - chr8_1:91423517-91423536 None:intergenic 45.0%
ATTTGAACAAGGCTGAGGCA+AGG + chr8_1:91423645-91423664 Msa1225860:CDS 45.0%
TTTGAACAAGGCTGAGGCAA+GGG + chr8_1:91423646-91423665 Msa1225860:CDS 45.0%
TCAACATTCTGCGCTTTACC+AGG - chr8_1:91423725-91423744 None:intergenic 45.0%
ATGGACTTATCAGAGCATGC+AGG - chr8_1:91424123-91424142 None:intergenic 45.0%
TCTGATAAGTCCATCACCAC+AGG + chr8_1:91424129-91424148 Msa1225860:CDS 45.0%
CTGATAAGTCCATCACCACA+GGG + chr8_1:91424130-91424149 Msa1225860:CDS 45.0%
CCTTTCCCAACAGAATTAGG+GGG - chr8_1:91424165-91424184 None:intergenic 45.0%
AGTGGACAGCAATGCATTCT+TGG - chr8_1:91424270-91424289 None:intergenic 45.0%
! AAAGAGCGTACCGAACTAGT+TGG + chr8_1:91424435-91424454 Msa1225860:CDS 45.0%
AGAAATCCGGCCAACTAGTT+CGG - chr8_1:91424448-91424467 None:intergenic 45.0%
GCCAACAGTAGAGAGAAATC+CGG - chr8_1:91424461-91424480 None:intergenic 45.0%
GATTTCTCTCTACTGTTGGC+TGG + chr8_1:91424461-91424480 Msa1225860:CDS 45.0%
TAAGCCACAAACCTCAACCA+AGG - chr8_1:91424505-91424524 None:intergenic 45.0%
GATGCAGAATGAGCAATACC+AGG + chr8_1:91424797-91424816 Msa1225860:intron 45.0%
!! CAAAGCAGGCATTGATACAG+TGG + chr8_1:91424860-91424879 Msa1225860:CDS 45.0%
TAGCACGCTATTGACAACAC+TGG - chr8_1:91425078-91425097 None:intergenic 45.0%
TTGTCAATAGCGTGCTACAG+AGG + chr8_1:91425081-91425100 Msa1225860:intron 45.0%
AAGTCTAAATGCTGTCCTGG+TGG - chr8_1:91425282-91425301 None:intergenic 45.0%
CAGAAGTCTAAATGCTGTCC+TGG - chr8_1:91425285-91425304 None:intergenic 45.0%
GACAGCATTTAGACTTCTGC+TGG + chr8_1:91425286-91425305 Msa1225860:intron 45.0%
!! CAAGATAACGGATAGTAGGC+TGG - chr8_1:91425419-91425438 None:intergenic 45.0%
!! TGTTGTAGCATTTTCGGGGT+CGG + chr8_1:91425437-91425456 Msa1225860:intron 45.0%
GTGCCAGTGTCATCAAATCT+TGG - chr8_1:91425480-91425499 None:intergenic 45.0%
ATGTGCCCCTCTATCATTGA+AGG + chr8_1:91425787-91425806 Msa1225860:intron 45.0%
TGTGCCCCTCTATCATTGAA+GGG + chr8_1:91425788-91425807 Msa1225860:intron 45.0%
GCATGACCCTTCAATGATAG+AGG - chr8_1:91425797-91425816 None:intergenic 45.0%
! CTTGCGCTGCAATTTTGCTT+AGG + chr8_1:91425825-91425844 Msa1225860:intron 45.0%
CAGAGATCGTTGTCAGTGAA+AGG - chr8_1:91425858-91425877 None:intergenic 45.0%
CTTTCACTGACAACGATCTC+TGG + chr8_1:91425856-91425875 Msa1225860:intron 45.0%
!!! GTTTTTGACTTAGCTGAGGC+AGG - chr8_1:91425905-91425924 None:intergenic 45.0%
GTAGAAAACAAGGCCCTGTT+TGG + chr8_1:91426029-91426048 Msa1225860:three_prime_UTR 45.0%
TGTCTGTGTCCGTGCTTCAT+AGG + chr8_1:91422336-91422355 Msa1225860:intron 50.0%
AGGTGATATCTGGTGAGGGT+GGG - chr8_1:91422618-91422637 None:intergenic 50.0%
ACCCTCACCAGATATCACCT+CGG + chr8_1:91422618-91422637 Msa1225860:intron 50.0%
ACCGAGGTGATATCTGGTGA+GGG - chr8_1:91422622-91422641 None:intergenic 50.0%
AACCGAGGTGATATCTGGTG+AGG - chr8_1:91422623-91422642 None:intergenic 50.0%
CCCAACTTTCCATCATACCG+TGG - chr8_1:91422837-91422856 None:intergenic 50.0%
GGAATGGGTATTTGGTCTGG+TGG + chr8_1:91422870-91422889 Msa1225860:intron 50.0%
TGAGCACATTGGATGCAACC+AGG + chr8_1:91423597-91423616 Msa1225860:CDS 50.0%
GAGCACATTGGATGCAACCA+GGG + chr8_1:91423598-91423617 Msa1225860:CDS 50.0%
TCCCAACAGAATTAGGGGGA+GGG - chr8_1:91424161-91424180 None:intergenic 50.0%
TTCCCAACAGAATTAGGGGG+AGG - chr8_1:91424162-91424181 None:intergenic 50.0%
CCCCCTAATTCTGTTGGGAA+AGG + chr8_1:91424162-91424181 Msa1225860:CDS 50.0%
! TTTGTGTGGCTTGGCAGAAC+CGG + chr8_1:91424308-91424327 Msa1225860:CDS 50.0%
GCCGGATTTCTCTCTACTGT+TGG + chr8_1:91424457-91424476 Msa1225860:CDS 50.0%
ACCTCCTTGGTTGAGGTTTG+TGG + chr8_1:91424498-91424517 Msa1225860:intron 50.0%
! TTTGATTAGCTCGGGGAGCT+TGG + chr8_1:91424623-91424642 Msa1225860:intron 50.0%
AGCAGTTGGACTGCTTCAGT+TGG + chr8_1:91424884-91424903 Msa1225860:CDS 50.0%
AACACGGGGAGTGACTTTCT+CGG - chr8_1:91424913-91424932 None:intergenic 50.0%
AAAGTCACTCCCCGTGTTAC+CGG + chr8_1:91424915-91424934 Msa1225860:CDS 50.0%
ATCCAAATGCCCCGGTAACA+CGG - chr8_1:91424929-91424948 None:intergenic 50.0%
! TGCTACAGAGGTGTAGCAGA+TGG + chr8_1:91425093-91425112 Msa1225860:intron 50.0%
! GCTACAGAGGTGTAGCAGAT+GGG + chr8_1:91425094-91425113 Msa1225860:intron 50.0%
! AGCTCGGACAGCAGCTATTT+TGG - chr8_1:91425156-91425175 None:intergenic 50.0%
!! GTTGTAGCATTTTCGGGGTC+GGG + chr8_1:91425438-91425457 Msa1225860:intron 50.0%
! TTTGACTTAGCTGAGGCAGG+AGG - chr8_1:91425902-91425921 None:intergenic 50.0%
ACGTACGACACTGACCCATC+TGG + chr8_1:91422106-91422125 Msa1225860:intron 55.0%
GAGGTGATATCTGGTGAGGG+TGG - chr8_1:91422619-91422638 None:intergenic 55.0%
GCACTCGAGCAGACACAGAT+TGG - chr8_1:91422786-91422805 None:intergenic 55.0%
GATGCAACCAGGGCAGAACT+TGG + chr8_1:91423608-91423627 Msa1225860:CDS 55.0%
AAGAAGGCCAAGTTCTGCCC+TGG - chr8_1:91423618-91423637 None:intergenic 55.0%
ACCCCTCCCCCTAATTCTGT+TGG + chr8_1:91424156-91424175 Msa1225860:CDS 55.0%
CCCAACAGAATTAGGGGGAG+GGG - chr8_1:91424160-91424179 None:intergenic 55.0%
CCCCTCCCCCTAATTCTGTT+GGG + chr8_1:91424157-91424176 Msa1225860:CDS 55.0%
AGCGTACCGAACTAGTTGGC+CGG + chr8_1:91424439-91424458 Msa1225860:CDS 55.0%
GCCACAAACCTCAACCAAGG+AGG - chr8_1:91424502-91424521 None:intergenic 55.0%
GGGGAGCTTGGAAGACTTTC+TGG + chr8_1:91424635-91424654 Msa1225860:CDS 55.0%
ACACGGGGAGTGACTTTCTC+GGG - chr8_1:91424912-91424931 None:intergenic 55.0%
AAGTCACTCCCCGTGTTACC+GGG + chr8_1:91424916-91424935 Msa1225860:CDS 55.0%
TCCAAATGCCCCGGTAACAC+GGG - chr8_1:91424928-91424947 None:intergenic 55.0%
! AGGGGTGTACCCTGTGGTGA+TGG - chr8_1:91424142-91424161 None:intergenic 60.0%
AGTCACTCCCCGTGTTACCG+GGG + chr8_1:91424917-91424936 Msa1225860:CDS 60.0%
CCAAATGCCCCGGTAACACG+GGG - chr8_1:91424927-91424946 None:intergenic 60.0%
! TCGGGGTCGGGTGCTATACT+CGG + chr8_1:91425450-91425469 Msa1225860:intron 60.0%
! CCCCGTGTTACCGGGGCATT+TGG + chr8_1:91424924-91424943 Msa1225860:CDS 65.0%
! CGGGGTCGGGTGCTATACTC+GGG + chr8_1:91425451-91425470 Msa1225860:intron 65.0%
! AGGGGGAGGGGTGTACCCTG+TGG - chr8_1:91424148-91424167 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 91421294 91426189 91421294 ID=Msa1225860;Name=Msa1225860
chr8_1 mRNA 91421294 91426189 91421294 ID=Msa1225860-mRNA-1;Parent=Msa1225860;Name=Msa1225860-mRNA-1;_AED=0.01;_eAED=0.01;_QI=141|1|1|1|0.71|0.62|8|258|236
chr8_1 exon 91421294 91421412 91421294 ID=Msa1225860-mRNA-1:exon:33327;Parent=Msa1225860-mRNA-1
chr8_1 exon 91423574 91423787 91423574 ID=Msa1225860-mRNA-1:exon:33328;Parent=Msa1225860-mRNA-1
chr8_1 exon 91424109 91424183 91424109 ID=Msa1225860-mRNA-1:exon:33329;Parent=Msa1225860-mRNA-1
chr8_1 exon 91424266 91424340 91424266 ID=Msa1225860-mRNA-1:exon:33330;Parent=Msa1225860-mRNA-1
chr8_1 exon 91424432 91424512 91424432 ID=Msa1225860-mRNA-1:exon:33331;Parent=Msa1225860-mRNA-1
chr8_1 exon 91424632 91424706 91424632 ID=Msa1225860-mRNA-1:exon:33332;Parent=Msa1225860-mRNA-1
chr8_1 exon 91424804 91424977 91424804 ID=Msa1225860-mRNA-1:exon:33333;Parent=Msa1225860-mRNA-1
chr8_1 exon 91425893 91426189 91425893 ID=Msa1225860-mRNA-1:exon:33334;Parent=Msa1225860-mRNA-1
chr8_1 five_prime_UTR 91421294 91421412 91421294 ID=Msa1225860-mRNA-1:five_prime_utr;Parent=Msa1225860-mRNA-1
chr8_1 five_prime_UTR 91423574 91423595 91423574 ID=Msa1225860-mRNA-1:five_prime_utr;Parent=Msa1225860-mRNA-1
chr8_1 CDS 91423596 91423787 91423596 ID=Msa1225860-mRNA-1:cds;Parent=Msa1225860-mRNA-1
chr8_1 CDS 91424109 91424183 91424109 ID=Msa1225860-mRNA-1:cds;Parent=Msa1225860-mRNA-1
chr8_1 CDS 91424266 91424340 91424266 ID=Msa1225860-mRNA-1:cds;Parent=Msa1225860-mRNA-1
chr8_1 CDS 91424432 91424512 91424432 ID=Msa1225860-mRNA-1:cds;Parent=Msa1225860-mRNA-1
chr8_1 CDS 91424632 91424706 91424632 ID=Msa1225860-mRNA-1:cds;Parent=Msa1225860-mRNA-1
chr8_1 CDS 91424804 91424977 91424804 ID=Msa1225860-mRNA-1:cds;Parent=Msa1225860-mRNA-1
chr8_1 CDS 91425893 91425931 91425893 ID=Msa1225860-mRNA-1:cds;Parent=Msa1225860-mRNA-1
chr8_1 three_prime_UTR 91425932 91426189 91425932 ID=Msa1225860-mRNA-1:three_prime_utr;Parent=Msa1225860-mRNA-1
Gene Sequence

>Msa1225860

ATGAGCACATTGGATGCAACCAGGGCAGAACTTGGCCTTCTTGTTTTATATTTGAACAAGGCTGAGGCAAGGGACAAGATATGCAGAGCGATACAATATGGTTCCAAATTCTTGAGTAATGGAGAACCTGGTAAAGCGCAGAATGTTGACAAAACAACCAGCTTAGCACGAAAAGTTTTTCGTCTATTCAAGTTTGTCAATGACCTGCATGCTCTGATAAGTCCATCACCACAGGGTACACCCCTCCCCCTAATTCTGTTGGGAAAGTCCAAGAATGCATTGCTGTCCACTTTCTTGTTTCTTGATCAATTTGTGTGGCTTGGCAGAACCGGTGTCATCGACAATAAAGAGCGTACCGAACTAGTTGGCCGGATTTCTCTCTACTGTTGGCTGGGTTCCTCAATATGTACCTCCTTGGTTGAGCTCGGGGAGCTTGGAAGACTTTCTGGATCAATGAAGAAGATAGAGAGAGAAATCAAGAACAGTAATAAATATGATAATGAGCAATACCAGGCCAAGCTAAAAAAATCAAATGAGAGGACTCTTTCACTCATCAAAGCAGGCATTGATACAGTGGTAGCAGTTGGACTGCTTCAGTTGGCACCCGAGAAAGTCACTCCCCGTGTTACCGGGGCATTTGGATTTGTTTCATCTCTAATATCTTGCTATCAGTTGCTTCCTCCTGCCTCAGCTAAGTCAAAAACATCGTGA

Protein sequence

>Msa1225860

MSTLDATRAELGLLVLYLNKAEARDKICRAIQYGSKFLSNGEPGKAQNVDKTTSLARKVFRLFKFVNDLHALISPSPQGTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGVIDNKERTELVGRISLYCWLGSSICTSLVELGELGRLSGSMKKIEREIKNSNKYDNEQYQAKLKKSNERTLSLIKAGIDTVVAVGLLQLAPEKVTPRVTGAFGFVSSLISCYQLLPPASAKSKTS*