Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879930 | XP_013468783.1 | 99.412 | 340 | 2 | 0 | 1 | 340 | 1 | 340 | 0.0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879930 | sp|Q9SB31|AHL3_ARATH | 67.925 | 212 | 58 | 5 | 48 | 256 | 85 | 289 | 1.90e-83 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879930 | A0A072VXL7 | 99.412 | 340 | 2 | 0 | 1 | 340 | 1 | 340 | 0.0 | 685 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0879930 | -0.806736 | 7.115643e-50 | -8.615850e-47 |
| Msa0002110 | Msa0879930 | -0.802594 | 5.209739e-49 | -8.615850e-47 |
| Msa0009640 | Msa0879930 | 0.801633 | 8.213339e-49 | -8.615850e-47 |
| Msa0011450 | Msa0879930 | -0.810012 | 1.424023e-50 | -8.615850e-47 |
| Msa0030700 | Msa0879930 | 0.988878 | 8.897350e-176 | -8.615850e-47 |
| Msa0078120 | Msa0879930 | 0.976039 | 4.545781e-141 | -8.615850e-47 |
| Msa0105410 | Msa0879930 | 0.820167 | 7.912232e-53 | -8.615850e-47 |
| Msa0113370 | Msa0879930 | -0.801096 | 1.057624e-48 | -8.615850e-47 |
| Msa0641130 | Msa0879930 | 0.812674 | 3.764618e-51 | -8.615850e-47 |
| Msa0641220 | Msa0879930 | 0.801181 | 1.016424e-48 | -8.615850e-47 |
| Msa0657720 | Msa0879930 | 0.812655 | 3.800756e-51 | -8.615850e-47 |
| Msa0702410 | Msa0879930 | 0.803438 | 3.486290e-49 | -8.615850e-47 |
| Msa0702720 | Msa0879930 | 0.800549 | 1.368310e-48 | -8.615850e-47 |
| Msa0702790 | Msa0879930 | 0.805197 | 1.499241e-49 | -8.615850e-47 |
| Msa0733010 | Msa0879930 | 0.831075 | 2.049671e-55 | -8.615850e-47 |
| Msa0734250 | Msa0879930 | 0.805251 | 1.461228e-49 | -8.615850e-47 |
| Msa0743930 | Msa0879930 | 0.832741 | 7.949107e-56 | -8.615850e-47 |
| Msa0744640 | Msa0879930 | 0.809111 | 2.223192e-50 | -8.615850e-47 |
| Msa0752450 | Msa0879930 | 0.812660 | 3.792061e-51 | -8.615850e-47 |
| Msa0773990 | Msa0879930 | 0.818745 | 1.669534e-52 | -8.615850e-47 |
| Msa0795750 | Msa0879930 | 0.819143 | 1.355585e-52 | -8.615850e-47 |
| Msa0816130 | Msa0879930 | 0.800288 | 1.546279e-48 | -8.615850e-47 |
| Msa0828950 | Msa0879930 | 0.812570 | 3.967502e-51 | -8.615850e-47 |
| Msa0833530 | Msa0879930 | 0.826153 | 3.170830e-54 | -8.615850e-47 |
| Msa0833950 | Msa0879930 | -0.813961 | 1.963902e-51 | -8.615850e-47 |
| Msa0841730 | Msa0879930 | 0.808668 | 2.765935e-50 | -8.615850e-47 |
| Msa0126000 | Msa0879930 | -0.801904 | 7.225628e-49 | -8.615850e-47 |
| Msa0152850 | Msa0879930 | 0.800888 | 1.166482e-48 | -8.615850e-47 |
| Msa0164490 | Msa0879930 | 0.816328 | 5.853210e-52 | -8.615850e-47 |
| Msa0170630 | Msa0879930 | 0.833881 | 4.132499e-56 | -8.615850e-47 |
| Msa0189600 | Msa0879930 | 0.804801 | 1.814068e-49 | -8.615850e-47 |
| Msa0206450 | Msa0879930 | 0.812526 | 4.055753e-51 | -8.615850e-47 |
| Msa0217060 | Msa0879930 | 0.804177 | 2.448514e-49 | -8.615850e-47 |
| Msa0220400 | Msa0879930 | -0.811877 | 5.618098e-51 | -8.615850e-47 |
| Msa0225190 | Msa0879930 | -0.803899 | 2.797062e-49 | -8.615850e-47 |
| Msa0235290 | Msa0879930 | 0.806898 | 6.577162e-50 | -8.615850e-47 |
| Msa0370580 | Msa0879930 | -0.806642 | 7.450107e-50 | -8.615850e-47 |
| Msa0372300 | Msa0879930 | 0.824761 | 6.773514e-54 | -8.615850e-47 |
| Msa0375330 | Msa0879930 | -0.802743 | 4.854594e-49 | -8.615850e-47 |
| Msa0380400 | Msa0879930 | -0.800520 | 1.387040e-48 | -8.615850e-47 |
| Msa0403470 | Msa0879930 | -0.818496 | 1.901814e-52 | -8.615850e-47 |
| Msa0405460 | Msa0879930 | -0.807717 | 4.409242e-50 | -8.615850e-47 |
| Msa0405470 | Msa0879930 | -0.808622 | 2.829613e-50 | -8.615850e-47 |
| Msa0405550 | Msa0879930 | -0.823148 | 1.618610e-53 | -8.615850e-47 |
| Msa0415100 | Msa0879930 | 0.816928 | 4.294277e-52 | -8.615850e-47 |
| Msa0420610 | Msa0879930 | 0.834587 | 2.750193e-56 | -8.615850e-47 |
| Msa0457560 | Msa0879930 | 0.816559 | 5.195822e-52 | -8.615850e-47 |
| Msa0476170 | Msa0879930 | -0.814423 | 1.552591e-51 | -8.615850e-47 |
| Msa0240900 | Msa0879930 | 0.804501 | 2.096018e-49 | -8.615850e-47 |
| Msa0260580 | Msa0879930 | -0.802602 | 5.191077e-49 | -8.615850e-47 |
| Msa0269170 | Msa0879930 | -0.822190 | 2.704759e-53 | -8.615850e-47 |
| Msa0271540 | Msa0879930 | 0.836098 | 1.141904e-56 | -8.615850e-47 |
| Msa0299530 | Msa0879930 | -0.829694 | 4.460939e-55 | -8.615850e-47 |
| Msa0305840 | Msa0879930 | 0.815303 | 9.905435e-52 | -8.615850e-47 |
| Msa0308470 | Msa0879930 | 0.813066 | 3.089281e-51 | -8.615850e-47 |
| Msa0319260 | Msa0879930 | 0.825886 | 3.669667e-54 | -8.615850e-47 |
| Msa0319270 | Msa0879930 | 0.808448 | 3.082561e-50 | -8.615850e-47 |
| Msa0355550 | Msa0879930 | 0.822419 | 2.393159e-53 | -8.615850e-47 |
| Msa0483970 | Msa0879930 | -0.826420 | 2.739118e-54 | -8.615850e-47 |
| Msa0512630 | Msa0879930 | 0.834145 | 3.550645e-56 | -8.615850e-47 |
| Msa0513970 | Msa0879930 | 0.805309 | 1.420757e-49 | -8.615850e-47 |
| Msa0521010 | Msa0879930 | 0.802133 | 6.482723e-49 | -8.615850e-47 |
| Msa0523490 | Msa0879930 | -0.807044 | 6.126878e-50 | -8.615850e-47 |
| Msa0537950 | Msa0879930 | 0.802557 | 5.300878e-49 | -8.615850e-47 |
| Msa0538190 | Msa0879930 | 0.814723 | 1.332651e-51 | -8.615850e-47 |
| Msa0545050 | Msa0879930 | 0.806907 | 6.549279e-50 | -8.615850e-47 |
| Msa0575320 | Msa0879930 | 0.818178 | 2.244843e-52 | -8.615850e-47 |
| Msa0583360 | Msa0879930 | -0.804609 | 1.989770e-49 | -8.615850e-47 |
| Msa0594050 | Msa0879930 | 0.824886 | 6.328783e-54 | -8.615850e-47 |
| Msa0846860 | Msa0879930 | 0.818030 | 2.425137e-52 | -8.615850e-47 |
| Msa0855870 | Msa0879930 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
| Msa0867660 | Msa0879930 | -0.823915 | 1.070832e-53 | -8.615850e-47 |
| Msa0870510 | Msa0879930 | 0.817585 | 3.055008e-52 | -8.615850e-47 |
| Msa0879930 | Msa0905570 | 0.804724 | 1.883033e-49 | -8.615850e-47 |
| Msa0879930 | Msa0908260 | -0.818070 | 2.374330e-52 | -8.615850e-47 |
| Msa0879930 | Msa0908470 | -0.819016 | 1.448994e-52 | -8.615850e-47 |
| Msa0879930 | Msa0908510 | -0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0879930 | Msa0908630 | -0.818050 | 2.399368e-52 | -8.615850e-47 |
| Msa0879930 | Msa0908690 | -0.804115 | 2.521540e-49 | -8.615850e-47 |
| Msa0879930 | Msa0908700 | -0.815774 | 7.780573e-52 | -8.615850e-47 |
| Msa0879930 | Msa0924900 | -0.821865 | 3.216792e-53 | -8.615850e-47 |
| Msa0879930 | Msa0930270 | 0.813000 | 3.193064e-51 | -8.615850e-47 |
| Msa0879930 | Msa0968470 | -0.804750 | 1.859343e-49 | -8.615850e-47 |
| Msa0879930 | Msa0983600 | -0.816019 | 6.862770e-52 | -8.615850e-47 |
| Msa0879930 | Msa0983610 | -0.816155 | 6.399077e-52 | -8.615850e-47 |
| Msa0879930 | Msa1030810 | 0.822982 | 1.769582e-53 | -8.615850e-47 |
| Msa0879930 | Msa1069890 | 0.820089 | 8.245836e-53 | -8.615850e-47 |
| Msa0879930 | Msa1086490 | -0.816362 | 5.749783e-52 | -8.615850e-47 |
| Msa0879930 | Msa1086670 | -0.802696 | 4.963885e-49 | -8.615850e-47 |
| Msa0879930 | Msa1086760 | -0.820767 | 5.764695e-53 | -8.615850e-47 |
| Msa0879930 | Msa1086770 | -0.813249 | 2.816379e-51 | -8.615850e-47 |
| Msa0879930 | Msa1086940 | -0.814109 | 1.821105e-51 | -8.615850e-47 |
| Msa0879930 | Msa1087070 | -0.818316 | 2.089162e-52 | -8.615850e-47 |
| Msa0879930 | Msa1087090 | -0.819903 | 9.096476e-53 | -8.615850e-47 |
| Msa0879930 | Msa1092310 | 0.831996 | 1.215965e-55 | -8.615850e-47 |
| Msa0879930 | Msa1130060 | 0.816948 | 4.250464e-52 | -8.615850e-47 |
| Msa0879930 | Msa1150280 | 0.819170 | 1.336924e-52 | -8.615850e-47 |
| Msa0879930 | Msa1202800 | 0.803355 | 3.627208e-49 | -8.615850e-47 |
| Msa0879930 | Msa1208450 | -0.811573 | 6.544848e-51 | -8.615850e-47 |
| Msa0879930 | Msa1225860 | -0.805594 | 1.238000e-49 | -8.615850e-47 |
| Msa0879930 | Msa1238600 | 0.842991 | 1.843569e-58 | -8.615850e-47 |
| Msa0879930 | Msa1238660 | 0.824418 | 8.158215e-54 | -8.615850e-47 |
| Msa0879930 | Msa1255210 | 0.815876 | 7.384993e-52 | -8.615850e-47 |
| Msa0879930 | Msa1256060 | 0.824990 | 5.982461e-54 | -8.615850e-47 |
| Msa0879930 | Msa1281690 | 0.810996 | 8.728329e-51 | -8.615850e-47 |
| Msa0879930 | Msa1289050 | 0.804391 | 2.209180e-49 | -8.615850e-47 |
| Msa0879930 | Msa1289090 | 0.804650 | 1.951187e-49 | -8.615850e-47 |
| Msa0879930 | Msa1295650 | 0.809890 | 1.513005e-50 | -8.615850e-47 |
| Msa0879930 | Msa1298390 | -0.806307 | 8.766457e-50 | -8.615850e-47 |
| Msa0879930 | Msa1319560 | 0.830812 | 2.378684e-55 | -8.615850e-47 |
| Msa0879930 | Msa1330920 | 0.800632 | 1.315918e-48 | -8.615850e-47 |
| Msa0879930 | Msa1341840 | 0.826813 | 2.207336e-54 | -8.615850e-47 |
| Msa0879930 | Msa1354360 | -0.816356 | 5.768467e-52 | -8.615850e-47 |
| Msa0879930 | Msa1354400 | -0.817380 | 3.398254e-52 | -8.615850e-47 |
| Msa0879930 | Msa1354520 | -0.817337 | 3.474523e-52 | -8.615850e-47 |
| Msa0879930 | Msa1354530 | -0.816823 | 4.532848e-52 | -8.615850e-47 |
| Msa0879930 | Msa1354650 | -0.812292 | 4.562955e-51 | -8.615850e-47 |
| Msa0879930 | Msa1354660 | -0.819430 | 1.166041e-52 | -8.615850e-47 |
| Msa0879930 | Msa1354780 | -0.807610 | 4.646239e-50 | -8.615850e-47 |
| Msa0879930 | Msa1354790 | -0.818292 | 2.115389e-52 | -8.615850e-47 |
| Msa0879930 | Msa1354960 | -0.822195 | 2.697491e-53 | -8.615850e-47 |
| Msa0879930 | Msa1356600 | -0.818765 | 1.652038e-52 | -8.615850e-47 |
| Msa0879930 | Msa1363820 | -0.822104 | 2.831317e-53 | -8.615850e-47 |
| Msa0879930 | Msa1364350 | -0.826665 | 2.395245e-54 | -8.615850e-47 |
| Msa0879930 | Msa1365990 | -0.815427 | 9.298767e-52 | -8.615850e-47 |
| Msa0879930 | Msa1366020 | -0.818282 | 2.126529e-52 | -8.615850e-47 |
| Msa0879930 | Msa1366030 | -0.814243 | 1.701607e-51 | -8.615850e-47 |
| Msa0879930 | Msa1366060 | -0.819239 | 1.289245e-52 | -8.615850e-47 |
| Msa0879930 | Msa1368260 | -0.814976 | 1.171105e-51 | -8.615850e-47 |
| Msa0879930 | Msa1376550 | -0.803036 | 4.222108e-49 | -8.615850e-47 |
| Msa0879930 | Msa1385360 | -0.808522 | 2.971479e-50 | -8.615850e-47 |
| Msa0879930 | Msa1385390 | -0.820428 | 6.895767e-53 | -8.615850e-47 |
| Msa0879930 | Msa1388030 | -0.807270 | 5.485699e-50 | -8.615850e-47 |
| Msa0879930 | Msa1391130 | -0.816603 | 5.079139e-52 | -8.615850e-47 |
| Msa0879930 | Msa1391140 | -0.815453 | 9.173624e-52 | -8.615850e-47 |
| Msa0879930 | Msa1391260 | -0.809325 | 2.001279e-50 | -8.615850e-47 |
| Msa0879930 | Msa1408110 | 0.812550 | 4.007190e-51 | -8.615850e-47 |
| Msa0879930 | Msa1434220 | 0.812531 | 4.045481e-51 | -8.615850e-47 |
| Msa0879930 | Msa1442920 | 0.814110 | 1.819940e-51 | -8.615850e-47 |
| Msa0879930 | Msa1445800 | 0.801792 | 7.618936e-49 | -8.615850e-47 |
| Msa0879930 | Msa1452710 | 0.804256 | 2.356712e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879930 | MtrunA17_Chr1g0188211 | 99.412 | 340 | 2 | 0 | 1 | 340 | 1 | 340 | 0.0 | 685 |
| Msa0879930 | MtrunA17_Chr6g0476061 | 53.644 | 343 | 115 | 13 | 1 | 325 | 1 | 317 | 6.89e-91 | 274 |
| Msa0879930 | MtrunA17_Chr7g0245841 | 49.107 | 336 | 124 | 11 | 1 | 310 | 1 | 315 | 2.08e-76 | 238 |
| Msa0879930 | MtrunA17_Chr4g0056761 | 51.799 | 278 | 90 | 8 | 17 | 267 | 17 | 277 | 5.78e-63 | 203 |
| Msa0879930 | MtrunA17_Chr8g0351761 | 41.096 | 365 | 133 | 9 | 1 | 310 | 1 | 338 | 5.55e-60 | 196 |
| Msa0879930 | MtrunA17_Chr1g0179461 | 39.871 | 311 | 145 | 11 | 49 | 340 | 69 | 356 | 5.32e-50 | 171 |
| Msa0879930 | MtrunA17_Chr5g0398621 | 44.151 | 265 | 98 | 9 | 14 | 264 | 3 | 231 | 5.00e-48 | 162 |
| Msa0879930 | MtrunA17_Chr8g0349091 | 42.578 | 256 | 120 | 8 | 49 | 301 | 89 | 320 | 1.92e-43 | 152 |
| Msa0879930 | MtrunA17_Chr5g0397551 | 43.363 | 226 | 104 | 7 | 37 | 261 | 59 | 261 | 1.46e-42 | 150 |
| Msa0879930 | MtrunA17_Chr7g0247431 | 41.026 | 234 | 116 | 4 | 48 | 278 | 88 | 302 | 1.53e-42 | 150 |
| Msa0879930 | MtrunA17_Chr4g0054661 | 45.413 | 218 | 83 | 6 | 42 | 249 | 66 | 257 | 1.11e-41 | 148 |
| Msa0879930 | MtrunA17_Chr6g0476241 | 42.534 | 221 | 95 | 5 | 46 | 266 | 117 | 305 | 4.58e-40 | 143 |
| Msa0879930 | MtrunA17_Chr8g0386741 | 39.035 | 228 | 121 | 5 | 48 | 274 | 96 | 306 | 5.04e-36 | 133 |
| Msa0879930 | MtrunA17_Chr1g0190011 | 50.427 | 117 | 53 | 3 | 134 | 248 | 109 | 222 | 1.07e-27 | 110 |
| Msa0879930 | MtrunA17_Chr7g0274821 | 53.719 | 121 | 52 | 2 | 130 | 249 | 139 | 256 | 1.36e-27 | 110 |
| Msa0879930 | MtrunA17_Chr4g0027371 | 47.287 | 129 | 64 | 2 | 124 | 248 | 9 | 137 | 2.03e-26 | 105 |
| Msa0879930 | MtrunA17_Chr4g0027351 | 50.382 | 131 | 57 | 3 | 115 | 243 | 4 | 128 | 3.85e-26 | 101 |
| Msa0879930 | MtrunA17_Chr4g0027331 | 49.242 | 132 | 59 | 3 | 115 | 242 | 4 | 131 | 7.02e-26 | 100 |
| Msa0879930 | MtrunA17_Chr1g0165101 | 37.443 | 219 | 97 | 6 | 47 | 248 | 83 | 278 | 4.73e-24 | 101 |
| Msa0879930 | MtrunA17_Chr3g0133051 | 41.463 | 123 | 69 | 3 | 134 | 253 | 101 | 223 | 1.06e-23 | 99.0 |
| Msa0879930 | MtrunA17_Chr4g0027301 | 44.355 | 124 | 65 | 2 | 124 | 243 | 16 | 139 | 6.52e-20 | 84.7 |
| Msa0879930 | MtrunA17_Chr5g0417581 | 41.912 | 136 | 62 | 4 | 129 | 248 | 14 | 148 | 1.59e-19 | 85.5 |
| Msa0879930 | MtrunA17_Chr5g0443311 | 38.172 | 186 | 89 | 6 | 69 | 249 | 27 | 191 | 1.05e-18 | 84.3 |
| Msa0879930 | MtrunA17_Chr3g0112131 | 43.966 | 116 | 61 | 2 | 134 | 248 | 106 | 218 | 1.12e-17 | 82.4 |
| Msa0879930 | MtrunA17_Chr5g0427311 | 36.552 | 145 | 83 | 6 | 126 | 263 | 72 | 214 | 1.55e-17 | 80.9 |
| Msa0879930 | MtrunA17_Chr1g0168121 | 40.171 | 117 | 66 | 2 | 133 | 248 | 68 | 181 | 2.27e-16 | 78.2 |
| Msa0879930 | MtrunA17_Chr5g0398531 | 37.654 | 162 | 81 | 4 | 88 | 248 | 97 | 239 | 2.54e-16 | 78.6 |
| Msa0879930 | MtrunA17_Chr7g0250031 | 46.610 | 118 | 55 | 3 | 134 | 248 | 84 | 196 | 2.70e-16 | 77.8 |
| Msa0879930 | MtrunA17_Chr4g0054651 | 44.068 | 118 | 58 | 3 | 134 | 248 | 103 | 215 | 1.05e-15 | 76.6 |
| Msa0879930 | MtrunA17_Chr8g0351651 | 37.736 | 159 | 79 | 4 | 91 | 248 | 86 | 225 | 1.21e-15 | 76.6 |
| Msa0879930 | MtrunA17_Chr5g0435681 | 42.241 | 116 | 63 | 2 | 134 | 248 | 116 | 228 | 9.32e-15 | 74.3 |
| Msa0879930 | MtrunA17_Chr3g0086021 | 39.252 | 107 | 58 | 2 | 146 | 248 | 118 | 221 | 8.61e-14 | 70.9 |
| Msa0879930 | MtrunA17_Chr1g0190051 | 40.517 | 116 | 65 | 2 | 134 | 248 | 101 | 213 | 3.12e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879930 | AT4G25320.1 | 67.925 | 212 | 58 | 5 | 48 | 256 | 85 | 289 | 1.93e-84 | 261 |
| Msa0879930 | AT5G62260.1 | 64.545 | 220 | 64 | 7 | 49 | 261 | 76 | 288 | 1.69e-83 | 259 |
| Msa0879930 | AT5G62260.3 | 64.545 | 220 | 64 | 7 | 49 | 261 | 76 | 288 | 1.69e-83 | 259 |
| Msa0879930 | AT5G62260.2 | 62.150 | 214 | 67 | 7 | 49 | 255 | 76 | 282 | 4.49e-77 | 238 |
| Msa0879930 | AT4G12080.1 | 58.051 | 236 | 73 | 7 | 48 | 271 | 88 | 309 | 1.62e-75 | 236 |
| Msa0879930 | AT5G51590.1 | 59.016 | 244 | 63 | 6 | 34 | 251 | 64 | 296 | 3.08e-71 | 228 |
| Msa0879930 | AT4G22770.2 | 56.195 | 226 | 80 | 7 | 48 | 267 | 71 | 283 | 1.32e-58 | 192 |
| Msa0879930 | AT4G22770.1 | 56.195 | 226 | 80 | 7 | 48 | 267 | 71 | 283 | 1.32e-58 | 192 |
| Msa0879930 | AT4G00200.2 | 53.817 | 262 | 91 | 8 | 15 | 265 | 14 | 256 | 1.70e-56 | 186 |
| Msa0879930 | AT4G00200.1 | 53.817 | 262 | 91 | 8 | 15 | 265 | 14 | 256 | 1.70e-56 | 186 |
| Msa0879930 | AT2G33620.1 | 53.589 | 209 | 67 | 6 | 48 | 250 | 96 | 280 | 1.17e-52 | 177 |
| Msa0879930 | AT2G33620.4 | 53.589 | 209 | 67 | 6 | 48 | 250 | 96 | 280 | 1.17e-52 | 177 |
| Msa0879930 | AT2G33620.2 | 53.589 | 209 | 67 | 6 | 48 | 250 | 96 | 280 | 1.17e-52 | 177 |
| Msa0879930 | AT2G33620.3 | 53.589 | 209 | 67 | 6 | 48 | 250 | 96 | 280 | 1.17e-52 | 177 |
| Msa0879930 | AT2G45850.1 | 37.544 | 285 | 149 | 5 | 7 | 288 | 56 | 314 | 8.11e-45 | 157 |
| Msa0879930 | AT2G45850.2 | 37.544 | 285 | 149 | 5 | 7 | 288 | 56 | 314 | 8.11e-45 | 157 |
| Msa0879930 | AT1G63470.1 | 45.933 | 209 | 90 | 5 | 48 | 251 | 104 | 294 | 5.60e-44 | 155 |
| Msa0879930 | AT2G45850.3 | 40.000 | 240 | 118 | 4 | 7 | 243 | 56 | 272 | 9.50e-41 | 144 |
| Msa0879930 | AT4G17950.1 | 37.868 | 272 | 112 | 9 | 48 | 292 | 130 | 371 | 2.29e-39 | 144 |
| Msa0879930 | AT3G61310.1 | 46.377 | 207 | 86 | 6 | 45 | 249 | 97 | 280 | 2.67e-39 | 142 |
| Msa0879930 | AT5G46640.1 | 43.119 | 218 | 92 | 5 | 45 | 249 | 98 | 296 | 2.03e-37 | 138 |
| Msa0879930 | AT1G63480.2 | 40.385 | 208 | 92 | 6 | 48 | 251 | 98 | 277 | 8.39e-35 | 130 |
| Msa0879930 | AT1G63480.1 | 40.385 | 208 | 92 | 6 | 48 | 251 | 98 | 277 | 8.39e-35 | 130 |
| Msa0879930 | AT1G63480.5 | 40.385 | 208 | 92 | 6 | 48 | 251 | 92 | 271 | 9.40e-35 | 130 |
| Msa0879930 | AT1G63480.7 | 40.385 | 208 | 92 | 6 | 48 | 251 | 92 | 271 | 9.40e-35 | 130 |
| Msa0879930 | AT1G63480.4 | 40.385 | 208 | 92 | 6 | 48 | 251 | 92 | 271 | 9.40e-35 | 130 |
| Msa0879930 | AT1G63480.3 | 40.385 | 208 | 92 | 6 | 48 | 251 | 92 | 271 | 9.40e-35 | 130 |
| Msa0879930 | AT1G63480.6 | 40.385 | 208 | 92 | 6 | 48 | 251 | 92 | 271 | 9.40e-35 | 130 |
| Msa0879930 | AT3G04590.1 | 39.207 | 227 | 108 | 6 | 30 | 248 | 79 | 283 | 9.24e-33 | 124 |
| Msa0879930 | AT3G04590.2 | 39.207 | 227 | 108 | 6 | 30 | 248 | 79 | 283 | 5.76e-32 | 124 |
| Msa0879930 | AT2G36560.1 | 43.704 | 135 | 70 | 4 | 131 | 262 | 102 | 233 | 6.29e-24 | 102 |
| Msa0879930 | AT5G49700.1 | 37.778 | 135 | 78 | 4 | 134 | 262 | 83 | 217 | 2.89e-20 | 89.4 |
| Msa0879930 | AT2G42940.1 | 38.983 | 177 | 79 | 7 | 76 | 249 | 43 | 193 | 1.05e-18 | 84.7 |
| Msa0879930 | AT1G14490.2 | 37.500 | 144 | 83 | 5 | 126 | 262 | 41 | 184 | 1.43e-17 | 80.9 |
| Msa0879930 | AT1G14490.1 | 37.500 | 144 | 83 | 5 | 126 | 262 | 22 | 165 | 1.47e-17 | 80.5 |
| Msa0879930 | AT3G60870.1 | 40.517 | 116 | 63 | 3 | 134 | 248 | 86 | 196 | 3.73e-17 | 80.5 |
| Msa0879930 | AT4G14465.1 | 43.103 | 116 | 62 | 2 | 134 | 248 | 94 | 206 | 4.31e-16 | 77.8 |
| Msa0879930 | AT2G35270.1 | 39.130 | 161 | 74 | 5 | 91 | 248 | 78 | 217 | 9.17e-16 | 77.0 |
| Msa0879930 | AT3G55560.1 | 41.026 | 117 | 66 | 2 | 134 | 249 | 115 | 229 | 1.91e-14 | 73.6 |
| Msa0879930 | AT1G76500.1 | 35.200 | 125 | 68 | 3 | 134 | 248 | 99 | 220 | 1.61e-13 | 70.5 |
| Msa0879930 | AT4G17800.1 | 41.228 | 114 | 63 | 2 | 136 | 248 | 111 | 221 | 1.79e-13 | 70.5 |
| Msa0879930 | AT3G04570.1 | 38.710 | 124 | 64 | 3 | 134 | 248 | 107 | 227 | 2.31e-12 | 67.4 |
| Msa0879930 | AT5G28590.1 | 37.398 | 123 | 46 | 3 | 130 | 248 | 26 | 121 | 2.34e-12 | 65.9 |
| Msa0879930 | AT4G12050.1 | 40.171 | 117 | 65 | 3 | 134 | 248 | 145 | 258 | 9.19e-12 | 65.9 |
| Msa0879930 | AT4G22810.1 | 32.716 | 162 | 86 | 5 | 91 | 248 | 105 | 247 | 1.25e-11 | 65.1 |
| Msa0879930 | AT2G45430.1 | 34.969 | 163 | 82 | 5 | 91 | 248 | 89 | 232 | 1.67e-11 | 64.7 |
| Msa0879930 | AT4G35390.1 | 41.176 | 119 | 62 | 4 | 134 | 248 | 90 | 204 | 1.73e-11 | 64.7 |
Find 122 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTACCACAGAAATTT+TGG | 0.113361 | 6_1:-22837522 | None:intergenic |
| TTAAGCTAAATTTAGAATTT+TGG | 0.127303 | 6_1:+22837832 | Msa0879930:five_prime_UTR |
| AAAATTGAAAGTATAAATTT+TGG | 0.212639 | 6_1:-22837301 | None:intergenic |
| ACTGTTCCAATTCAATTTCT+AGG | 0.268350 | 6_1:+22837617 | Msa0879930:five_prime_UTR |
| AAATAAAGTAATTAAATATT+CGG | 0.279604 | 6_1:-22837354 | None:intergenic |
| ATGTGTGATTTGTGAATTTA+GGG | 0.286667 | 6_1:-22837445 | None:intergenic |
| ATGGAAGAAAGAGAGAATTT+TGG | 0.289936 | 6_1:+22837886 | Msa0879930:CDS |
| CTTCGTCAATCGACTTCTTC+AGG | 0.300773 | 6_1:+22840205 | Msa0879930:CDS |
| CATGTGTGATTTGTGAATTT+AGG | 0.300996 | 6_1:-22837446 | None:intergenic |
| AATTCTATTCTCTATATATA+TGG | 0.303409 | 6_1:+22841283 | Msa0879930:three_prime_UTR |
| CCACCCAATACTCGGCCATC+TGG | 0.308208 | 6_1:-22840614 | None:intergenic |
| GATTTGTGAATTTAGGGTTT+TGG | 0.311501 | 6_1:-22837439 | None:intergenic |
| TCCATTCTCAGTTGGCATAA+AGG | 0.318075 | 6_1:-22840546 | None:intergenic |
| AACGGTGCCGGTGTCGTTGC+CGG | 0.338330 | 6_1:+22837996 | Msa0879930:CDS |
| GGCCCAGATGGCCGAGTATT+GGG | 0.346491 | 6_1:+22840611 | Msa0879930:CDS |
| TTTGAGATTCTTTCCTTGTC+TGG | 0.357599 | 6_1:+22840521 | Msa0879930:CDS |
| TTACTTCAGAAAACAGAGTT+TGG | 0.358542 | 6_1:-22837716 | None:intergenic |
| AATGCAGCAGGTGTCATAAA+AGG | 0.358990 | 6_1:-22840922 | None:intergenic |
| TATGTGCTTACAGTGAATTC+TGG | 0.363275 | 6_1:+22839964 | Msa0879930:CDS |
| TCCTTTATGCCAACTGAGAA+TGG | 0.367271 | 6_1:+22840545 | Msa0879930:CDS |
| TGAAGACCTAGAAATTGAAT+TGG | 0.368969 | 6_1:-22837623 | None:intergenic |
| TGGTGGGATGAGTGTCTCTT+TGG | 0.369450 | 6_1:+22840586 | Msa0879930:CDS |
| AGGCCCAGATGGCCGAGTAT+TGG | 0.385737 | 6_1:+22840610 | Msa0879930:CDS |
| TAAGAAAATAATACAAACTT+TGG | 0.400872 | 6_1:-22837481 | None:intergenic |
| CTTGTAATTCCATTCTCAGT+TGG | 0.403549 | 6_1:-22840554 | None:intergenic |
| TCAAGTTATTCTGTTGTGAA+TGG | 0.409214 | 6_1:+22841354 | Msa0879930:three_prime_UTR |
| GAGAGTTCTCAGCTTGGAAA+AGG | 0.409824 | 6_1:+22838139 | Msa0879930:CDS |
| CCATCTGGACCATACTTCCT+TGG | 0.412247 | 6_1:-22838048 | None:intergenic |
| GTCTCTTTGGCAGGCCCAGA+TGG | 0.415568 | 6_1:+22840599 | Msa0879930:CDS |
| CAGAGATCCTTTACCTGAAA+AGG | 0.415604 | 6_1:+22841014 | Msa0879930:CDS |
| GAAAGCGCAGTCACAGCTCC+AGG | 0.416976 | 6_1:-22838081 | None:intergenic |
| GCTGGTTTGCTTATAGCTTC+CGG | 0.419761 | 6_1:+22840644 | Msa0879930:CDS |
| GAAAACGTTTGAATCTTCAA+TGG | 0.426164 | 6_1:+22837802 | Msa0879930:five_prime_UTR |
| TCCAAGTTGTTATCAATCCT+TGG | 0.429223 | 6_1:-22837961 | None:intergenic |
| TTCTTCTTCAAAGCTGTCTC+CGG | 0.437794 | 6_1:-22838015 | None:intergenic |
| GTTTAGTGTTAGATGTTAGT+TGG | 0.439419 | 6_1:+22841153 | Msa0879930:three_prime_UTR |
| AACGGAATCGACGATGAAAT+CGG | 0.441018 | 6_1:-22838111 | None:intergenic |
| GATTTCTTCATAGATTCAAC+AGG | 0.446009 | 6_1:-22838174 | None:intergenic |
| TTCGTCAATCGACTTCTTCA+GGG | 0.447507 | 6_1:+22840206 | Msa0879930:CDS |
| ATGCTATAATTAAGTGTGAT+TGG | 0.454428 | 6_1:+22841306 | Msa0879930:three_prime_UTR |
| AGGGGAAGACCAAGGAAGTA+TGG | 0.459354 | 6_1:+22838039 | Msa0879930:CDS |
| TGCATTCATTAGGTCGTTGT+GGG | 0.460179 | 6_1:+22840757 | Msa0879930:intron |
| GGAATTACAAGAAGCAGATC+TGG | 0.463594 | 6_1:+22840566 | Msa0879930:CDS |
| TATTGCACGTGATCCTTGTT+GGG | 0.468137 | 6_1:-22840143 | None:intergenic |
| CCAGGAGCAGGCTTACCATC+TGG | 0.469400 | 6_1:-22838063 | None:intergenic |
| TTCTCTTCTTGAAATGCAGC+AGG | 0.470365 | 6_1:-22840934 | None:intergenic |
| ATATTGCACGTGATCCTTGT+TGG | 0.472595 | 6_1:-22840144 | None:intergenic |
| CACCCAATACTCGGCCATCT+GGG | 0.474541 | 6_1:-22840613 | None:intergenic |
| AAAACGTTTGAATCTTCAAT+GGG | 0.476944 | 6_1:+22837803 | Msa0879930:five_prime_UTR |
| GCAGTCACAGCTCCAGGAGC+AGG | 0.477303 | 6_1:-22838075 | None:intergenic |
| GTGTCTAATGAAGTAAGTTT+CGG | 0.481593 | 6_1:+22840889 | Msa0879930:CDS |
| GTATTGGGTGGTGGACTCGC+TGG | 0.482204 | 6_1:+22840626 | Msa0879930:CDS |
| GTTTGAATCTTCAATGGGTA+GGG | 0.483701 | 6_1:+22837808 | Msa0879930:five_prime_UTR |
| CGACACCGGCACCGTTGCCA+TGG | 0.488569 | 6_1:-22837989 | None:intergenic |
| GGGATGAGTGTCTCTTTGGC+AGG | 0.488739 | 6_1:+22840590 | Msa0879930:CDS |
| TAAACTCACCTCATACGTTA+AGG | 0.491146 | 6_1:-22840233 | None:intergenic |
| TCATCGTCGATTCCGTTGAC+TGG | 0.493414 | 6_1:+22838117 | Msa0879930:CDS |
| CGTTTGAATCTTCAATGGGT+AGG | 0.496496 | 6_1:+22837807 | Msa0879930:five_prime_UTR |
| TCATTGTAGCAAATAGATGT+AGG | 0.498893 | 6_1:+22841228 | Msa0879930:three_prime_UTR |
| TTTGGTGCTGTGAATGTAGT+GGG | 0.499641 | 6_1:+22837904 | Msa0879930:CDS |
| CCAGATGGTAAGCCTGCTCC+TGG | 0.499803 | 6_1:+22838063 | Msa0879930:CDS |
| AAAATGGTTCACGTCCGTCT+TGG | 0.503428 | 6_1:-22837273 | None:intergenic |
| CGAGTCCACCACCCAATACT+CGG | 0.505760 | 6_1:-22840622 | None:intergenic |
| AGCAAAACAGCAAGAAGCAG+AGG | 0.510263 | 6_1:+22840806 | Msa0879930:CDS |
| AGAGTTTACCTGCACGGGAC+CGG | 0.519678 | 6_1:-22840663 | None:intergenic |
| ATCTCTGTCTTCAGCAGATG+AGG | 0.527702 | 6_1:-22840998 | None:intergenic |
| ACAACAATGCTCAAGACTCT+AGG | 0.534120 | 6_1:+22840971 | Msa0879930:CDS |
| AGAGTTCTCAGCTTGGAAAA+GGG | 0.534719 | 6_1:+22838140 | Msa0879930:CDS |
| TATAGCTTCCGGTCCCGTGC+AGG | 0.538508 | 6_1:+22840655 | Msa0879930:CDS |
| ATATGTATTCTCTCTGCCAC+TGG | 0.538679 | 6_1:+22840163 | Msa0879930:CDS |
| GATGGCCGAGTATTGGGTGG+TGG | 0.550417 | 6_1:+22840617 | Msa0879930:CDS |
| GTGCATTCATTAGGTCGTTG+TGG | 0.552620 | 6_1:+22840756 | Msa0879930:intron |
| TCAGCTTGGAAAAGGGGTAG+AGG | 0.552867 | 6_1:+22838147 | Msa0879930:CDS |
| GAGTTCTCAGCTTGGAAAAG+GGG | 0.553297 | 6_1:+22838141 | Msa0879930:CDS |
| TCCAAGGATTGATAACAACT+TGG | 0.557972 | 6_1:+22837960 | Msa0879930:CDS |
| AGACAACCACAATTCTGTCC+TGG | 0.562239 | 6_1:-22841112 | None:intergenic |
| GCTGTCTCCGGCAACGACAC+CGG | 0.564357 | 6_1:-22838003 | None:intergenic |
| ACTCCAGAGTTTACCTGCAC+GGG | 0.565877 | 6_1:-22840668 | None:intergenic |
| TGATGATTAACATGCGGAGG+AGG | 0.567490 | 6_1:-22840865 | None:intergenic |
| AGACAGCTTTGAAGAAGAAG+AGG | 0.569402 | 6_1:+22838019 | Msa0879930:CDS |
| TGAGCTTTCAAGCTGCTCCA+AGG | 0.570496 | 6_1:+22837944 | Msa0879930:CDS |
| GACAGCTTTGAAGAAGAAGA+GGG | 0.570605 | 6_1:+22838020 | Msa0879930:CDS |
| AAGCACATAAGCTGTGAAGT+TGG | 0.573504 | 6_1:-22839950 | None:intergenic |
| CCAAGGAAGTATGGTCCAGA+TGG | 0.574476 | 6_1:+22838048 | Msa0879930:CDS |
| GAGGGAATTGCATACTCAGT+AGG | 0.575333 | 6_1:+22839925 | Msa0879930:CDS |
| CATTGTAGCAAATAGATGTA+GGG | 0.575767 | 6_1:+22841229 | Msa0879930:three_prime_UTR |
| GTAGGTGGAGGTGTAAGTGA+GGG | 0.576701 | 6_1:+22839907 | Msa0879930:CDS |
| AACTTACCAGGACAGAATTG+TGG | 0.576879 | 6_1:+22841106 | Msa0879930:three_prime_UTR |
| TACTCCAGAGTTTACCTGCA+CGG | 0.581270 | 6_1:-22840669 | None:intergenic |
| TGTAGGTGGAGGTGTAAGTG+AGG | 0.583447 | 6_1:+22839906 | Msa0879930:CDS |
| TAAATAATACCTTGCACAGG+TGG | 0.587655 | 6_1:-22838222 | None:intergenic |
| GCTGTCAAAATTAACTTACC+AGG | 0.589328 | 6_1:+22841094 | Msa0879930:three_prime_UTR |
| CAGCTTGGAAAAGGGGTAGA+GGG | 0.590560 | 6_1:+22838148 | Msa0879930:CDS |
| TTTGAAAGTCCACCTGTGCA+AGG | 0.595210 | 6_1:+22838213 | Msa0879930:CDS |
| GCTGAGAACTCTCCAGTCAA+CGG | 0.597272 | 6_1:-22838129 | None:intergenic |
| GGAGCAGCTTGAAAGCTCAC+AGG | 0.597686 | 6_1:-22837940 | None:intergenic |
| ACTTTATTAAATTTCCAAGA+CGG | 0.599935 | 6_1:+22837259 | None:intergenic |
| AAACAGCAAGAAGCAGAGGG+TGG | 0.602793 | 6_1:+22840810 | Msa0879930:CDS |
| GAATGTAGTGGGTGGTAATG+AGG | 0.604474 | 6_1:+22837915 | Msa0879930:CDS |
| TGGCATAAAGGAACCAGACA+AGG | 0.611075 | 6_1:-22840534 | None:intergenic |
| TCGTCAATCGACTTCTTCAG+GGG | 0.612115 | 6_1:+22840207 | Msa0879930:CDS |
| AAAATTATGTCCTCCCAACA+AGG | 0.612526 | 6_1:+22840130 | Msa0879930:CDS |
| TGACTGGAGAGTTCTCAGCT+TGG | 0.612765 | 6_1:+22838133 | Msa0879930:CDS |
| TGCACGTGATCCTTGTTGGG+AGG | 0.616462 | 6_1:-22840140 | None:intergenic |
| CTATAAATAATACCTTGCAC+AGG | 0.617295 | 6_1:-22838225 | None:intergenic |
| TCTAATGAAGTAAGTTTCGG+TGG | 0.620980 | 6_1:+22840892 | Msa0879930:CDS |
| ATTACAAGAAGCAGATCTGG+TGG | 0.630094 | 6_1:+22840569 | Msa0879930:CDS |
| GCAAAACAGCAAGAAGCAGA+GGG | 0.637562 | 6_1:+22840807 | Msa0879930:CDS |
| AACATTTGAAATTGTGCCAG+TGG | 0.637698 | 6_1:-22840179 | None:intergenic |
| CCAGATGGCCGAGTATTGGG+TGG | 0.641351 | 6_1:+22840614 | Msa0879930:CDS |
| ACAGCATCAGTAAAAGCATG+AGG | 0.647482 | 6_1:-22841076 | None:intergenic |
| GGTGCTGTGAATGTAGTGGG+TGG | 0.656148 | 6_1:+22837907 | Msa0879930:CDS |
| ATCGACGATGAAATCGGCAT+AGG | 0.666533 | 6_1:-22838105 | None:intergenic |
| TTACAAGAAGCAGATCTGGT+GGG | 0.675023 | 6_1:+22840570 | Msa0879930:CDS |
| GACACATGATGATTAACATG+CGG | 0.679694 | 6_1:-22840871 | None:intergenic |
| AGAAGAAGAGGGGAAGACCA+AGG | 0.680559 | 6_1:+22838031 | Msa0879930:CDS |
| ACATGATGATTAACATGCGG+AGG | 0.682437 | 6_1:-22840868 | None:intergenic |
| GCTTACAGTGAATTCTGGCG+AGG | 0.694276 | 6_1:+22839969 | Msa0879930:CDS |
| ACAGCTTTGAAGAAGAAGAG+GGG | 0.698390 | 6_1:+22838021 | Msa0879930:CDS |
| CGTCAATCGACTTCTTCAGG+GGG | 0.699414 | 6_1:+22840208 | Msa0879930:CDS |
| AGAGAATAGAATTCTTAACA+AGG | 0.710713 | 6_1:-22841273 | None:intergenic |
| AGATGAACAAAACAACCACG+TGG | 0.758321 | 6_1:-22841188 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATTTTTATATTTAA+TGG | + | chr6_1:22839737-22839756 | Msa0879930:intron | 0.0% |
| !!! | ATTTTATTTTTATATTTAAT+GGG | + | chr6_1:22839738-22839757 | Msa0879930:intron | 0.0% |
| !!! | ATAAATTTTGGTTAATAAAA+TGG | - | chr6_1:22837292-22837311 | None:intergenic | 10.0% |
| !!! | AAAATTGAAAGTATAAATTT+TGG | - | chr6_1:22837304-22837323 | None:intergenic | 10.0% |
| !!! | AAATGAATTTTTTTTCAAAA+GGG | - | chr6_1:22837750-22837769 | None:intergenic | 10.0% |
| !!! | AAAATGAATTTTTTTTCAAA+AGG | - | chr6_1:22837751-22837770 | None:intergenic | 10.0% |
| !! | ATGAAAATTATAAGAAAAAA+AGG | - | chr6_1:22838310-22838329 | None:intergenic | 10.0% |
| !!! | ATAAAGTTGATAAAAAAATG+AGG | - | chr6_1:22837398-22837417 | None:intergenic | 15.0% |
| !! | TAAGAAAATAATACAAACTT+TGG | - | chr6_1:22837484-22837503 | None:intergenic | 15.0% |
| !!! | AATGAATTTTTTTTCAAAAG+GGG | - | chr6_1:22837749-22837768 | None:intergenic | 15.0% |
| !!! | TTAAGCTAAATTTAGAATTT+TGG | + | chr6_1:22837832-22837851 | Msa0879930:five_prime_UTR | 15.0% |
| !!! | TAAGCTAAATTTAGAATTTT+GGG | + | chr6_1:22837833-22837852 | Msa0879930:five_prime_UTR | 15.0% |
| !! | ATTAAGAACAAGTTAAAATT+TGG | - | chr6_1:22838973-22838992 | None:intergenic | 15.0% |
| !!! | TAAAGAATCTTCTAAAATTA+GGG | + | chr6_1:22839441-22839460 | Msa0879930:intron | 15.0% |
| !!! | TTTATTTTTGTGAACTATAA+AGG | + | chr6_1:22839795-22839814 | Msa0879930:intron | 15.0% |
| !! | ATAAAATATGATAAAAGGAA+AGG | - | chr6_1:22840004-22840023 | None:intergenic | 15.0% |
| !!! | TCCTTTTATCATATTTTATA+TGG | + | chr6_1:22840005-22840024 | Msa0879930:intron | 15.0% |
| !! | ACCATATAAAATATGATAAA+AGG | - | chr6_1:22840009-22840028 | None:intergenic | 15.0% |
| !!! | TTATCATATTTTATATGGTA+TGG | + | chr6_1:22840010-22840029 | Msa0879930:intron | 15.0% |
| !!! | TAGTTTTTGAATTTCATTTT+TGG | + | chr6_1:22840045-22840064 | Msa0879930:intron | 15.0% |
| !! | AATTCTATTCTCTATATATA+TGG | + | chr6_1:22841283-22841302 | Msa0879930:three_prime_UTR | 15.0% |
| !!! | AATTTTTTCCAAAATTTCTG+TGG | + | chr6_1:22837514-22837533 | Msa0879930:five_prime_UTR | 20.0% |
| !!! | TGAAATTTTTAGTGTGATTA+CGG | + | chr6_1:22837776-22837795 | Msa0879930:five_prime_UTR | 20.0% |
| !!! | AAGCTAAATTTAGAATTTTG+GGG | + | chr6_1:22837834-22837853 | Msa0879930:five_prime_UTR | 20.0% |
| !!! | TTCTTTGATTTGCATAAAAA+TGG | + | chr6_1:22837867-22837886 | Msa0879930:exon | 20.0% |
| !! | TATGTTGAAAAAATAACAAG+AGG | - | chr6_1:22838456-22838475 | None:intergenic | 20.0% |
| !!! | TTTTTGAGTTCTAATTGTTA+TGG | + | chr6_1:22838506-22838525 | Msa0879930:intron | 20.0% |
| !! | TTGTGATAGAGTTTATATTT+AGG | + | chr6_1:22838583-22838602 | Msa0879930:intron | 20.0% |
| !! | TGTGATAGAGTTTATATTTA+GGG | + | chr6_1:22838584-22838603 | Msa0879930:intron | 20.0% |
| !! | TCTTCTTATAAAGGAAAATA+AGG | - | chr6_1:22838738-22838757 | None:intergenic | 20.0% |
| !!! | TACTTTTCTTCTTCTTATAA+AGG | - | chr6_1:22838747-22838766 | None:intergenic | 20.0% |
| !!! | TTTTAACTTGTTCTTAATCA+TGG | + | chr6_1:22838975-22838994 | Msa0879930:intron | 20.0% |
| !!! | CATTTTTTTGTCTTAATCAT+CGG | - | chr6_1:22839031-22839050 | None:intergenic | 20.0% |
| !!! | GTAAAGAATCTTCTAAAATT+AGG | + | chr6_1:22839440-22839459 | Msa0879930:intron | 20.0% |
| !!! | CTTTTATATAATGAATGAAC+TGG | + | chr6_1:22839764-22839783 | Msa0879930:intron | 20.0% |
| !! | AACTACATAAAATACGTATA+AGG | - | chr6_1:22839887-22839906 | None:intergenic | 20.0% |
| !! | ATGTGTGATTTGTGAATTTA+GGG | - | chr6_1:22837448-22837467 | None:intergenic | 25.0% |
| !! | TGAAATTACCACAGAAATTT+TGG | - | chr6_1:22837525-22837544 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTGTTCTTGCAA+TGG | + | chr6_1:22837546-22837565 | Msa0879930:five_prime_UTR | 25.0% |
| !!! | GAAATTTTTAGTGTGATTAC+GGG | + | chr6_1:22837777-22837796 | Msa0879930:five_prime_UTR | 25.0% |
| ! | AAAACGTTTGAATCTTCAAT+GGG | + | chr6_1:22837803-22837822 | Msa0879930:five_prime_UTR | 25.0% |
| ! | AGTGGAATTCATTATTATTC+AGG | + | chr6_1:22838394-22838413 | Msa0879930:intron | 25.0% |
| ! | GTGATAGAGTTTATATTTAG+GGG | + | chr6_1:22838585-22838604 | Msa0879930:intron | 25.0% |
| ! | TGATAGAGTTTATATTTAGG+GGG | + | chr6_1:22838586-22838605 | Msa0879930:intron | 25.0% |
| ! | AGTATTGCATTATATGACAA+TGG | + | chr6_1:22838763-22838782 | Msa0879930:intron | 25.0% |
| ! | AAATGGTTAGAGTAAATGAA+GGG | + | chr6_1:22838786-22838805 | Msa0879930:intron | 25.0% |
| ! | TCTTCTTGTAAAAAATAGAG+TGG | + | chr6_1:22839054-22839073 | Msa0879930:intron | 25.0% |
| !!! | TGCATCAGTATTTTAATCAA+AGG | + | chr6_1:22839095-22839114 | Msa0879930:intron | 25.0% |
| !!! | TTTTGGTTGCATATAGTATA+AGG | + | chr6_1:22839152-22839171 | Msa0879930:intron | 25.0% |
| ! | AGAGATTTATAGAACGTATT+AGG | + | chr6_1:22839188-22839207 | Msa0879930:intron | 25.0% |
| ! | GAGATTTATAGAACGTATTA+GGG | + | chr6_1:22839189-22839208 | Msa0879930:intron | 25.0% |
| ! | GGTTCTTTAATTGTTTAAGA+GGG | + | chr6_1:22839210-22839229 | Msa0879930:intron | 25.0% |
| ! | ATTAAATACATGAATTGAGC+TGG | + | chr6_1:22839533-22839552 | Msa0879930:intron | 25.0% |
| ! | TTTCTATTATTGAAGTCTCT+TGG | + | chr6_1:22839624-22839643 | Msa0879930:intron | 25.0% |
| !! | GTAATAAAGAAATTCTAGAG+AGG | - | chr6_1:22839826-22839845 | None:intergenic | 25.0% |
| !! | TACGTATTTTATGTAGTTGT+AGG | + | chr6_1:22839889-22839908 | Msa0879930:intron | 25.0% |
| !! | CATTTGTTTCTCTATCATAT+TGG | + | chr6_1:22840292-22840311 | Msa0879930:intron | 25.0% |
| ! | AGAGAATAGAATTCTTAACA+AGG | - | chr6_1:22841276-22841295 | None:intergenic | 25.0% |
| ! | ATGCTATAATTAAGTGTGAT+TGG | + | chr6_1:22841306-22841325 | Msa0879930:three_prime_UTR | 25.0% |
| !! | GATTTGTGAATTTAGGGTTT+TGG | - | chr6_1:22837442-22837461 | None:intergenic | 30.0% |
| ! | CATGTGTGATTTGTGAATTT+AGG | - | chr6_1:22837449-22837468 | None:intergenic | 30.0% |
| ACTGTTCCAATTCAATTTCT+AGG | + | chr6_1:22837617-22837636 | Msa0879930:five_prime_UTR | 30.0% | |
| TGAAGACCTAGAAATTGAAT+TGG | - | chr6_1:22837626-22837645 | None:intergenic | 30.0% | |
| TTACTTCAGAAAACAGAGTT+TGG | - | chr6_1:22837719-22837738 | None:intergenic | 30.0% | |
| GAAAACGTTTGAATCTTCAA+TGG | + | chr6_1:22837802-22837821 | Msa0879930:five_prime_UTR | 30.0% | |
| ! | ATGGAAGAAAGAGAGAATTT+TGG | + | chr6_1:22837886-22837905 | Msa0879930:CDS | 30.0% |
| ! | TAACAACTTGGATTTTTCCA+TGG | + | chr6_1:22837972-22837991 | Msa0879930:CDS | 30.0% |
| GATTTCTTCATAGATTCAAC+AGG | - | chr6_1:22838177-22838196 | None:intergenic | 30.0% | |
| CTATAAATAATACCTTGCAC+AGG | - | chr6_1:22838228-22838247 | None:intergenic | 30.0% | |
| ! | TGACTGTTACTATGTTTCTA+AGG | + | chr6_1:22838330-22838349 | Msa0879930:intron | 30.0% |
| ! | TTGAGTTCTAATTGTTATGG+AGG | + | chr6_1:22838509-22838528 | Msa0879930:intron | 30.0% |
| CTTTGTATTCAGATCTGAAA+AGG | - | chr6_1:22838640-22838659 | None:intergenic | 30.0% | |
| !! | TATTTTTGTGGTTGAAAGTG+AGG | + | chr6_1:22838677-22838696 | Msa0879930:intron | 30.0% |
| AGGTTGTATTTGTTCTGTTT+AGG | + | chr6_1:22838697-22838716 | Msa0879930:intron | 30.0% | |
| GGTTGTATTTGTTCTGTTTA+GGG | + | chr6_1:22838698-22838717 | Msa0879930:intron | 30.0% | |
| GCATTATATGACAATGGAAA+TGG | + | chr6_1:22838769-22838788 | Msa0879930:intron | 30.0% | |
| GAAATGGTTAGAGTAAATGA+AGG | + | chr6_1:22838785-22838804 | Msa0879930:intron | 30.0% | |
| ACTATTAGACTCATTCTAGT+TGG | - | chr6_1:22838813-22838832 | None:intergenic | 30.0% | |
| ATTATTCAAACCAACCAACA+AGG | - | chr6_1:22838915-22838934 | None:intergenic | 30.0% | |
| !! | TGTTGGTTGGTTTGAATAAT+AGG | + | chr6_1:22838915-22838934 | Msa0879930:intron | 30.0% |
| TGAATAATAGGCTGCAAAAT+AGG | + | chr6_1:22838927-22838946 | Msa0879930:intron | 30.0% | |
| ATTATTAAGAGCAATCTCCT+AGG | + | chr6_1:22839002-22839021 | Msa0879930:intron | 30.0% | |
| ! | AAGTTTGCAGAAGAGATTTT+TGG | + | chr6_1:22839135-22839154 | Msa0879930:intron | 30.0% |
| CATATAGTATAAGGTATGCT+TGG | + | chr6_1:22839161-22839180 | Msa0879930:intron | 30.0% | |
| GGGTTCTTTAATTGTTTAAG+AGG | + | chr6_1:22839209-22839228 | Msa0879930:intron | 30.0% | |
| CTTTAATTGTTTAAGAGGGT+TGG | + | chr6_1:22839214-22839233 | Msa0879930:intron | 30.0% | |
| !! | GTCTTTGAGGTTATGAATTA+AGG | + | chr6_1:22839243-22839262 | Msa0879930:intron | 30.0% |
| CAATTGTGTTCCATACTTTA+CGG | - | chr6_1:22839278-22839297 | None:intergenic | 30.0% | |
| GTATGGAACACAATTGTTTA+TGG | + | chr6_1:22839282-22839301 | Msa0879930:intron | 30.0% | |
| AACACAATTGTTTATGGACT+CGG | + | chr6_1:22839288-22839307 | Msa0879930:intron | 30.0% | |
| ! | TCTAAAATTAGGGCCATAAT+AGG | + | chr6_1:22839451-22839470 | Msa0879930:intron | 30.0% |
| CTAAAATTAGGGCCATAATA+GGG | + | chr6_1:22839452-22839471 | Msa0879930:intron | 30.0% | |
| AACAATACATGGCAGTAAAT+TGG | - | chr6_1:22839481-22839500 | None:intergenic | 30.0% | |
| GGAGTTAAGACTTTCAAATA+TGG | + | chr6_1:22839554-22839573 | Msa0879930:intron | 30.0% | |
| GAAGAAGCTTATGTATCATT+CGG | - | chr6_1:22839703-22839722 | None:intergenic | 30.0% | |
| GTATAAGGAAGATCAATTGA+TGG | - | chr6_1:22839872-22839891 | None:intergenic | 30.0% | |
| ! | GTATTTTATGTAGTTGTAGG+TGG | + | chr6_1:22839892-22839911 | Msa0879930:intron | 30.0% |
| TTTATATGGTATGGATCAAG+TGG | + | chr6_1:22840019-22840038 | Msa0879930:intron | 30.0% | |
| TAAATGCTAAAATGAGCATG+TGG | - | chr6_1:22840075-22840094 | None:intergenic | 30.0% | |
| CATATAAACGAAGGACTTTA+TGG | - | chr6_1:22840326-22840345 | None:intergenic | 30.0% | |
| CATATAATACAAGACAGACA+TGG | - | chr6_1:22840352-22840371 | None:intergenic | 30.0% | |
| !!! | AATTTTGAGTTTCCCTTCTA+TGG | + | chr6_1:22840410-22840429 | Msa0879930:intron | 30.0% |
| GTGTCTAATGAAGTAAGTTT+CGG | + | chr6_1:22840889-22840908 | Msa0879930:CDS | 30.0% | |
| GTTTAGTGTTAGATGTTAGT+TGG | + | chr6_1:22841153-22841172 | Msa0879930:three_prime_UTR | 30.0% | |
| TCATTGTAGCAAATAGATGT+AGG | + | chr6_1:22841228-22841247 | Msa0879930:three_prime_UTR | 30.0% | |
| CATTGTAGCAAATAGATGTA+GGG | + | chr6_1:22841229-22841248 | Msa0879930:three_prime_UTR | 30.0% | |
| TCAAGTTATTCTGTTGTGAA+TGG | + | chr6_1:22841354-22841373 | Msa0879930:three_prime_UTR | 30.0% | |
| !! | ATTTAGGGTTTTGGTGGAAA+AGG | - | chr6_1:22837433-22837452 | None:intergenic | 35.0% |
| !! | TTGTGAATTTAGGGTTTTGG+TGG | - | chr6_1:22837439-22837458 | None:intergenic | 35.0% |
| ! | TCACAATACTGCGATTTTCT+CGG | + | chr6_1:22837582-22837601 | Msa0879930:five_prime_UTR | 35.0% |
| GTTTGAATCTTCAATGGGTA+GGG | + | chr6_1:22837808-22837827 | Msa0879930:five_prime_UTR | 35.0% | |
| ! | TCCAAGGATTGATAACAACT+TGG | + | chr6_1:22837960-22837979 | Msa0879930:CDS | 35.0% |
| TCCAAGTTGTTATCAATCCT+TGG | - | chr6_1:22837964-22837983 | None:intergenic | 35.0% | |
| TAAATAATACCTTGCACAGG+TGG | - | chr6_1:22838225-22838244 | None:intergenic | 35.0% | |
| !! | CAGTTTTTGAGAAATGAGAG+TGG | + | chr6_1:22838376-22838395 | Msa0879930:intron | 35.0% |
| TAGAGTTTATATTTAGGGGG+TGG | + | chr6_1:22838589-22838608 | Msa0879930:intron | 35.0% | |
| AGAGTTTATATTTAGGGGGT+GGG | + | chr6_1:22838590-22838609 | Msa0879930:intron | 35.0% | |
| TGAAAAGGAATCTCAGCTAA+GGG | - | chr6_1:22838625-22838644 | None:intergenic | 35.0% | |
| AGATCTGAATACAAAGTGTG+AGG | + | chr6_1:22838644-22838663 | Msa0879930:intron | 35.0% | |
| CATCTTACTAATCACCTTGT+TGG | + | chr6_1:22838898-22838917 | Msa0879930:intron | 35.0% | |
| TTACTAATCACCTTGTTGGT+TGG | + | chr6_1:22838902-22838921 | Msa0879930:intron | 35.0% | |
| AATAGAGTGGTCTCTTAGAA+TGG | + | chr6_1:22839067-22839086 | Msa0879930:intron | 35.0% | |
| AAAGGATGAGGTAGATTTGA+AGG | - | chr6_1:22839665-22839684 | None:intergenic | 35.0% | |
| ! | CTACCTCATCCTTTAAAAGA+TGG | + | chr6_1:22839671-22839690 | Msa0879930:intron | 35.0% |
| !! | GATCCATCTTTTAAAGGATG+AGG | - | chr6_1:22839677-22839696 | None:intergenic | 35.0% |
| ATCAATTGATGGAGAAAGAC+AGG | - | chr6_1:22839861-22839880 | None:intergenic | 35.0% | |
| ! | TTTTATGTAGTTGTAGGTGG+AGG | + | chr6_1:22839895-22839914 | Msa0879930:intron | 35.0% |
| TATGTGCTTACAGTGAATTC+TGG | + | chr6_1:22839964-22839983 | Msa0879930:CDS | 35.0% | |
| ! | TTGGGAGGACATAATTTTCA+TGG | - | chr6_1:22840128-22840147 | None:intergenic | 35.0% |
| AAAATTATGTCCTCCCAACA+AGG | + | chr6_1:22840130-22840149 | Msa0879930:CDS | 35.0% | |
| ! | AACATTTGAAATTGTGCCAG+TGG | - | chr6_1:22840182-22840201 | None:intergenic | 35.0% |
| TAAACTCACCTCATACGTTA+AGG | - | chr6_1:22840236-22840255 | None:intergenic | 35.0% | |
| TCACTAACTCCATACTGAAT+CGG | + | chr6_1:22840440-22840459 | Msa0879930:intron | 35.0% | |
| !! | TATGTAACACCGATTCAGTA+TGG | - | chr6_1:22840452-22840471 | None:intergenic | 35.0% |
| TCATTTATGCCCTTGTTGAA+TGG | + | chr6_1:22840484-22840503 | Msa0879930:intron | 35.0% | |
| CCTGTAATTCCATTCAACAA+GGG | - | chr6_1:22840496-22840515 | None:intergenic | 35.0% | |
| CCTTGTTGAATGGAATTACA+GGG | + | chr6_1:22840494-22840513 | Msa0879930:intron | 35.0% | |
| CTTGTTGAATGGAATTACAG+GGG | + | chr6_1:22840495-22840514 | Msa0879930:intron | 35.0% | |
| ! | TTTGAGATTCTTTCCTTGTC+TGG | + | chr6_1:22840521-22840540 | Msa0879930:CDS | 35.0% |
| CTTGTAATTCCATTCTCAGT+TGG | - | chr6_1:22840557-22840576 | None:intergenic | 35.0% | |
| CACTATGTTGTGCATTCATT+AGG | + | chr6_1:22840747-22840766 | Msa0879930:intron | 35.0% | |
| GACACATGATGATTAACATG+CGG | - | chr6_1:22840874-22840893 | None:intergenic | 35.0% | |
| TCTAATGAAGTAAGTTTCGG+TGG | + | chr6_1:22840892-22840911 | Msa0879930:CDS | 35.0% | |
| !!! | TTAGAGTCCTTTTCAGGTAA+AGG | - | chr6_1:22841024-22841043 | None:intergenic | 35.0% |
| ! | CTATGATTAGAGTCCTTTTC+AGG | - | chr6_1:22841030-22841049 | None:intergenic | 35.0% |
| GCTGTCAAAATTAACTTACC+AGG | + | chr6_1:22841094-22841113 | Msa0879930:three_prime_UTR | 35.0% | |
| CGTTTGAATCTTCAATGGGT+AGG | + | chr6_1:22837807-22837826 | Msa0879930:five_prime_UTR | 40.0% | |
| !!! | TTTTGGTGCTGTGAATGTAG+TGG | + | chr6_1:22837903-22837922 | Msa0879930:CDS | 40.0% |
| !! | TTTGGTGCTGTGAATGTAGT+GGG | + | chr6_1:22837904-22837923 | Msa0879930:CDS | 40.0% |
| ! | CTTGGATTTTTCCATGGCAA+CGG | + | chr6_1:22837978-22837997 | Msa0879930:CDS | 40.0% |
| TTCTTCTTCAAAGCTGTCTC+CGG | - | chr6_1:22838018-22838037 | None:intergenic | 40.0% | |
| !! | AGACAGCTTTGAAGAAGAAG+AGG | + | chr6_1:22838019-22838038 | Msa0879930:CDS | 40.0% |
| !! | GACAGCTTTGAAGAAGAAGA+GGG | + | chr6_1:22838020-22838039 | Msa0879930:CDS | 40.0% |
| !! | ACAGCTTTGAAGAAGAAGAG+GGG | + | chr6_1:22838021-22838040 | Msa0879930:CDS | 40.0% |
| AACGGAATCGACGATGAAAT+CGG | - | chr6_1:22838114-22838133 | None:intergenic | 40.0% | |
| AGAGTTCTCAGCTTGGAAAA+GGG | + | chr6_1:22838140-22838159 | Msa0879930:CDS | 40.0% | |
| GAGTTTATATTTAGGGGGTG+GGG | + | chr6_1:22838591-22838610 | Msa0879930:intron | 40.0% | |
| AGTTTATATTTAGGGGGTGG+GGG | + | chr6_1:22838592-22838611 | Msa0879930:intron | 40.0% | |
| CTGAAAAGGAATCTCAGCTA+AGG | - | chr6_1:22838626-22838645 | None:intergenic | 40.0% | |
| TCTGAATACAAAGTGTGAGG+TGG | + | chr6_1:22838647-22838666 | Msa0879930:intron | 40.0% | |
| !! | GGTGGATGTGGATATTTTTG+TGG | + | chr6_1:22838665-22838684 | Msa0879930:intron | 40.0% |
| GTCTTAATCATCGGATTCCT+AGG | - | chr6_1:22839022-22839041 | None:intergenic | 40.0% | |
| TCCATACTTTACGGCTTTCT+AGG | - | chr6_1:22839269-22839288 | None:intergenic | 40.0% | |
| ! | TGTTTATGGACTCGGTTATG+TGG | + | chr6_1:22839296-22839315 | Msa0879930:intron | 40.0% |
| CTGCACTATGTCATAGTATG+TGG | + | chr6_1:22839337-22839356 | Msa0879930:intron | 40.0% | |
| TGACTACACAATGTTGATCC+AGG | + | chr6_1:22839414-22839433 | Msa0879930:intron | 40.0% | |
| GACTACACAATGTTGATCCA+GGG | + | chr6_1:22839415-22839434 | Msa0879930:intron | 40.0% | |
| TAGAAGATTCTTTACTGCCC+TGG | - | chr6_1:22839435-22839454 | None:intergenic | 40.0% | |
| AAATTAGGGCCATAATAGGG+TGG | + | chr6_1:22839455-22839474 | Msa0879930:intron | 40.0% | |
| GTAAATTGGCCACCCTATTA+TGG | - | chr6_1:22839467-22839486 | None:intergenic | 40.0% | |
| TCACACATCGCAACAATACA+TGG | - | chr6_1:22839492-22839511 | None:intergenic | 40.0% | |
| ATGTATTGTTGCGATGTGTG+AGG | + | chr6_1:22839491-22839510 | Msa0879930:intron | 40.0% | |
| ! | CGGTCAGATCCATCTTTTAA+AGG | - | chr6_1:22839683-22839702 | None:intergenic | 40.0% |
| AAGCACATAAGCTGTGAAGT+TGG | - | chr6_1:22839953-22839972 | None:intergenic | 40.0% | |
| ! | GATTTTCTATGCTCTGTCTC+AGG | + | chr6_1:22840096-22840115 | Msa0879930:intron | 40.0% |
| TATTGCACGTGATCCTTGTT+GGG | - | chr6_1:22840146-22840165 | None:intergenic | 40.0% | |
| ATATTGCACGTGATCCTTGT+TGG | - | chr6_1:22840147-22840166 | None:intergenic | 40.0% | |
| ATATGTATTCTCTCTGCCAC+TGG | + | chr6_1:22840163-22840182 | Msa0879930:CDS | 40.0% | |
| ! | TTCGTCAATCGACTTCTTCA+GGG | + | chr6_1:22840206-22840225 | Msa0879930:CDS | 40.0% |
| ACATGGCTGCATATAAACGA+AGG | - | chr6_1:22840335-22840354 | None:intergenic | 40.0% | |
| ! | AGTGAGTCGATTCCATAGAA+GGG | - | chr6_1:22840425-22840444 | None:intergenic | 40.0% |
| ! | TAGTGAGTCGATTCCATAGA+AGG | - | chr6_1:22840426-22840445 | None:intergenic | 40.0% |
| CCCTTGTTGAATGGAATTAC+AGG | + | chr6_1:22840493-22840512 | Msa0879930:intron | 40.0% | |
| CCCTGTAATTCCATTCAACA+AGG | - | chr6_1:22840497-22840516 | None:intergenic | 40.0% | |
| TCCTTTATGCCAACTGAGAA+TGG | + | chr6_1:22840545-22840564 | Msa0879930:CDS | 40.0% | |
| TCCATTCTCAGTTGGCATAA+AGG | - | chr6_1:22840549-22840568 | None:intergenic | 40.0% | |
| GGAATTACAAGAAGCAGATC+TGG | + | chr6_1:22840566-22840585 | Msa0879930:CDS | 40.0% | |
| ATTACAAGAAGCAGATCTGG+TGG | + | chr6_1:22840569-22840588 | Msa0879930:CDS | 40.0% | |
| TTACAAGAAGCAGATCTGGT+GGG | + | chr6_1:22840570-22840589 | Msa0879930:CDS | 40.0% | |
| TGCATTCATTAGGTCGTTGT+GGG | + | chr6_1:22840757-22840776 | Msa0879930:intron | 40.0% | |
| ACATGATGATTAACATGCGG+AGG | - | chr6_1:22840871-22840890 | None:intergenic | 40.0% | |
| ! | AATGCAGCAGGTGTCATAAA+AGG | - | chr6_1:22840925-22840944 | None:intergenic | 40.0% |
| TTCTCTTCTTGAAATGCAGC+AGG | - | chr6_1:22840937-22840956 | None:intergenic | 40.0% | |
| ACAACAATGCTCAAGACTCT+AGG | + | chr6_1:22840971-22840990 | Msa0879930:CDS | 40.0% | |
| CAGAGATCCTTTACCTGAAA+AGG | + | chr6_1:22841014-22841033 | Msa0879930:CDS | 40.0% | |
| ! | ACAGCATCAGTAAAAGCATG+AGG | - | chr6_1:22841079-22841098 | None:intergenic | 40.0% |
| AACTTACCAGGACAGAATTG+TGG | + | chr6_1:22841106-22841125 | Msa0879930:three_prime_UTR | 40.0% | |
| !!! | TGGTTTGTTAGTTTTCCACG+TGG | + | chr6_1:22841173-22841192 | Msa0879930:three_prime_UTR | 40.0% |
| AGATGAACAAAACAACCACG+TGG | - | chr6_1:22841191-22841210 | None:intergenic | 40.0% | |
| AAAATGGTTCACGTCCGTCT+TGG | - | chr6_1:22837276-22837295 | None:intergenic | 45.0% | |
| !! | GAATGTAGTGGGTGGTAATG+AGG | + | chr6_1:22837915-22837934 | Msa0879930:CDS | 45.0% |
| ATCGACGATGAAATCGGCAT+AGG | - | chr6_1:22838108-22838127 | None:intergenic | 45.0% | |
| GAGAGTTCTCAGCTTGGAAA+AGG | + | chr6_1:22838139-22838158 | Msa0879930:CDS | 45.0% | |
| GAGTTCTCAGCTTGGAAAAG+GGG | + | chr6_1:22838141-22838160 | Msa0879930:CDS | 45.0% | |
| TTTGAAAGTCCACCTGTGCA+AGG | + | chr6_1:22838213-22838232 | Msa0879930:CDS | 45.0% | |
| GTTTATATTTAGGGGGTGGG+GGG | + | chr6_1:22838593-22838612 | Msa0879930:intron | 45.0% | |
| TACAAAGTGTGAGGTGGATG+TGG | + | chr6_1:22838653-22838672 | Msa0879930:intron | 45.0% | |
| ! | GCTAGTTTGTCGTGTAGAAC+TGG | + | chr6_1:22838837-22838856 | Msa0879930:intron | 45.0% |
| GCCTAGAAAGCCGTAAAGTA+TGG | + | chr6_1:22839265-22839284 | Msa0879930:intron | 45.0% | |
| GAGGGAATTGCATACTCAGT+AGG | + | chr6_1:22839925-22839944 | Msa0879930:CDS | 45.0% | |
| ! | CTTCGTCAATCGACTTCTTC+AGG | + | chr6_1:22840205-22840224 | Msa0879930:CDS | 45.0% |
| ! | TCGTCAATCGACTTCTTCAG+GGG | + | chr6_1:22840207-22840226 | Msa0879930:CDS | 45.0% |
| GTTGAATGGAATTACAGGGG+CGG | + | chr6_1:22840498-22840517 | Msa0879930:intron | 45.0% | |
| TGGCATAAAGGAACCAGACA+AGG | - | chr6_1:22840537-22840556 | None:intergenic | 45.0% | |
| !! | GCTGGTTTGCTTATAGCTTC+CGG | + | chr6_1:22840644-22840663 | Msa0879930:CDS | 45.0% |
| TACTCCAGAGTTTACCTGCA+CGG | - | chr6_1:22840672-22840691 | None:intergenic | 45.0% | |
| ATGCACAACATAGTGCGTGT+TGG | - | chr6_1:22840742-22840761 | None:intergenic | 45.0% | |
| GTGCATTCATTAGGTCGTTG+TGG | + | chr6_1:22840756-22840775 | Msa0879930:intron | 45.0% | |
| ! | GTTGTGGGAAGTTTTCTTCC+TGG | + | chr6_1:22840772-22840791 | Msa0879930:CDS | 45.0% |
| ! | TTTTCTTCCTGGTCACCATC+TGG | + | chr6_1:22840783-22840802 | Msa0879930:CDS | 45.0% |
| !!! | TCTTGCTGTTTTGCTCCAGA+TGG | - | chr6_1:22840801-22840820 | None:intergenic | 45.0% |
| AGCAAAACAGCAAGAAGCAG+AGG | + | chr6_1:22840806-22840825 | Msa0879930:CDS | 45.0% | |
| GCAAAACAGCAAGAAGCAGA+GGG | + | chr6_1:22840807-22840826 | Msa0879930:CDS | 45.0% | |
| TGATGATTAACATGCGGAGG+AGG | - | chr6_1:22840868-22840887 | None:intergenic | 45.0% | |
| ATCTCTGTCTTCAGCAGATG+AGG | - | chr6_1:22841001-22841020 | None:intergenic | 45.0% | |
| AGACAACCACAATTCTGTCC+TGG | - | chr6_1:22841115-22841134 | None:intergenic | 45.0% | |
| !! | AAATAAAGTAATTAAATATT+CGG | - | chr6_1:22837357-22837376 | None:intergenic | 5.0% |
| TGAGCTTTCAAGCTGCTCCA+AGG | + | chr6_1:22837944-22837963 | Msa0879930:CDS | 50.0% | |
| ! | TTTTTCCATGGCAACGGTGC+CGG | + | chr6_1:22837984-22838003 | Msa0879930:CDS | 50.0% |
| AGAAGAAGAGGGGAAGACCA+AGG | + | chr6_1:22838031-22838050 | Msa0879930:CDS | 50.0% | |
| AGGGGAAGACCAAGGAAGTA+TGG | + | chr6_1:22838039-22838058 | Msa0879930:CDS | 50.0% | |
| CCATCTGGACCATACTTCCT+TGG | - | chr6_1:22838051-22838070 | None:intergenic | 50.0% | |
| ! | CCAAGGAAGTATGGTCCAGA+TGG | + | chr6_1:22838048-22838067 | Msa0879930:CDS | 50.0% |
| !! | TCATCGTCGATTCCGTTGAC+TGG | + | chr6_1:22838117-22838136 | Msa0879930:CDS | 50.0% |
| GCTGAGAACTCTCCAGTCAA+CGG | - | chr6_1:22838132-22838151 | None:intergenic | 50.0% | |
| TGACTGGAGAGTTCTCAGCT+TGG | + | chr6_1:22838133-22838152 | Msa0879930:CDS | 50.0% | |
| TCAGCTTGGAAAAGGGGTAG+AGG | + | chr6_1:22838147-22838166 | Msa0879930:CDS | 50.0% | |
| CAGCTTGGAAAAGGGGTAGA+GGG | + | chr6_1:22838148-22838167 | Msa0879930:CDS | 50.0% | |
| ! | TGTAGGTGGAGGTGTAAGTG+AGG | + | chr6_1:22839906-22839925 | Msa0879930:CDS | 50.0% |
| ! | GTAGGTGGAGGTGTAAGTGA+GGG | + | chr6_1:22839907-22839926 | Msa0879930:CDS | 50.0% |
| GCTTACAGTGAATTCTGGCG+AGG | + | chr6_1:22839969-22839988 | Msa0879930:CDS | 50.0% | |
| ! | CGTCAATCGACTTCTTCAGG+GGG | + | chr6_1:22840208-22840227 | Msa0879930:CDS | 50.0% |
| !! | AGGGGGTACCTTAACGTATG+AGG | + | chr6_1:22840225-22840244 | Msa0879930:CDS | 50.0% |
| TGGTGGGATGAGTGTCTCTT+TGG | + | chr6_1:22840586-22840605 | Msa0879930:CDS | 50.0% | |
| ACTCCAGAGTTTACCTGCAC+GGG | - | chr6_1:22840671-22840690 | None:intergenic | 50.0% | |
| !! | GTGCAGGTAAACTCTGGAGT+AGG | + | chr6_1:22840671-22840690 | Msa0879930:intron | 50.0% |
| ! | TTTTGCTCCAGATGGTGACC+AGG | - | chr6_1:22840793-22840812 | None:intergenic | 50.0% |
| AAACAGCAAGAAGCAGAGGG+TGG | + | chr6_1:22840810-22840829 | Msa0879930:CDS | 50.0% | |
| ! | GGTGCTGTGAATGTAGTGGG+TGG | + | chr6_1:22837907-22837926 | Msa0879930:CDS | 55.0% |
| GGAGCAGCTTGAAAGCTCAC+AGG | - | chr6_1:22837943-22837962 | None:intergenic | 55.0% | |
| ! | GGGTTGGCACTCTGTCTTTG+AGG | + | chr6_1:22839230-22839249 | Msa0879930:intron | 55.0% |
| TGCACGTGATCCTTGTTGGG+AGG | - | chr6_1:22840143-22840162 | None:intergenic | 55.0% | |
| GGGATGAGTGTCTCTTTGGC+AGG | + | chr6_1:22840590-22840609 | Msa0879930:CDS | 55.0% | |
| CACCCAATACTCGGCCATCT+GGG | - | chr6_1:22840616-22840635 | None:intergenic | 55.0% | |
| CGAGTCCACCACCCAATACT+CGG | - | chr6_1:22840625-22840644 | None:intergenic | 55.0% | |
| AGAGTTTACCTGCACGGGAC+CGG | - | chr6_1:22840666-22840685 | None:intergenic | 55.0% | |
| CCAGGAGCAGGCTTACCATC+TGG | - | chr6_1:22838066-22838085 | None:intergenic | 60.0% | |
| CCAGATGGTAAGCCTGCTCC+TGG | + | chr6_1:22838063-22838082 | Msa0879930:CDS | 60.0% | |
| ! | GAAAGCGCAGTCACAGCTCC+AGG | - | chr6_1:22838084-22838103 | None:intergenic | 60.0% |
| TATTTAGGGGGTGGGGGGAG+TGG | + | chr6_1:22838598-22838617 | Msa0879930:intron | 60.0% | |
| GTCTCTTTGGCAGGCCCAGA+TGG | + | chr6_1:22840599-22840618 | Msa0879930:CDS | 60.0% | |
| AGGCCCAGATGGCCGAGTAT+TGG | + | chr6_1:22840610-22840629 | Msa0879930:CDS | 60.0% | |
| GGCCCAGATGGCCGAGTATT+GGG | + | chr6_1:22840611-22840630 | Msa0879930:CDS | 60.0% | |
| CCACCCAATACTCGGCCATC+TGG | - | chr6_1:22840617-22840636 | None:intergenic | 60.0% | |
| !! | CCAGATGGCCGAGTATTGGG+TGG | + | chr6_1:22840614-22840633 | Msa0879930:CDS | 60.0% |
| !! | GATGGCCGAGTATTGGGTGG+TGG | + | chr6_1:22840617-22840636 | Msa0879930:CDS | 60.0% |
| !! | GTATTGGGTGGTGGACTCGC+TGG | + | chr6_1:22840626-22840645 | Msa0879930:CDS | 60.0% |
| TATAGCTTCCGGTCCCGTGC+AGG | + | chr6_1:22840655-22840674 | Msa0879930:CDS | 60.0% | |
| GGTCCCGTGCAGGTAAACTC+TGG | + | chr6_1:22840665-22840684 | Msa0879930:intron | 60.0% | |
| !! | AACGGTGCCGGTGTCGTTGC+CGG | + | chr6_1:22837996-22838015 | Msa0879930:CDS | 65.0% |
| GCTGTCTCCGGCAACGACAC+CGG | - | chr6_1:22838006-22838025 | None:intergenic | 65.0% | |
| GCAGTCACAGCTCCAGGAGC+AGG | - | chr6_1:22838078-22838097 | None:intergenic | 65.0% | |
| CGACACCGGCACCGTTGCCA+TGG | - | chr6_1:22837992-22838011 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 22837273 | 22841398 | 22837273 | ID=Msa0879930;Name=Msa0879930 |
| chr6_1 | mRNA | 22837273 | 22841398 | 22837273 | ID=Msa0879930-mRNA-1;Parent=Msa0879930;Name=Msa0879930-mRNA-1;_AED=0.05;_eAED=0.05;_QI=613|1|1|1|1|1|5|333|340 |
| chr6_1 | exon | 22837273 | 22838234 | 22837273 | ID=Msa0879930-mRNA-1:exon:6279;Parent=Msa0879930-mRNA-1 |
| chr6_1 | exon | 22839905 | 22839990 | 22839905 | ID=Msa0879930-mRNA-1:exon:6280;Parent=Msa0879930-mRNA-1 |
| chr6_1 | exon | 22840118 | 22840246 | 22840118 | ID=Msa0879930-mRNA-1:exon:6281;Parent=Msa0879930-mRNA-1 |
| chr6_1 | exon | 22840515 | 22840676 | 22840515 | ID=Msa0879930-mRNA-1:exon:6282;Parent=Msa0879930-mRNA-1 |
| chr6_1 | exon | 22840769 | 22841398 | 22840769 | ID=Msa0879930-mRNA-1:exon:6283;Parent=Msa0879930-mRNA-1 |
| chr6_1 | five_prime_UTR | 22837273 | 22837885 | 22837273 | ID=Msa0879930-mRNA-1:five_prime_utr;Parent=Msa0879930-mRNA-1 |
| chr6_1 | CDS | 22837886 | 22838234 | 22837886 | ID=Msa0879930-mRNA-1:cds;Parent=Msa0879930-mRNA-1 |
| chr6_1 | CDS | 22839905 | 22839990 | 22839905 | ID=Msa0879930-mRNA-1:cds;Parent=Msa0879930-mRNA-1 |
| chr6_1 | CDS | 22840118 | 22840246 | 22840118 | ID=Msa0879930-mRNA-1:cds;Parent=Msa0879930-mRNA-1 |
| chr6_1 | CDS | 22840515 | 22840676 | 22840515 | ID=Msa0879930-mRNA-1:cds;Parent=Msa0879930-mRNA-1 |
| chr6_1 | CDS | 22840769 | 22841065 | 22840769 | ID=Msa0879930-mRNA-1:cds;Parent=Msa0879930-mRNA-1 |
| chr6_1 | three_prime_UTR | 22841066 | 22841398 | 22841066 | ID=Msa0879930-mRNA-1:three_prime_utr;Parent=Msa0879930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
