Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454000 | sp|Q10PL5|ITPK2_ORYSJ | 52.000 | 100 | 41 | 2 | 1 | 93 | 1 | 100 | 1.33e-25 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454000 | A0A072VQB8 | 96.429 | 84 | 2 | 1 | 1 | 84 | 1 | 83 | 3.26e-45 | 160 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041380 | Msa1454000 | 0.938121 | 1.133991e-98 | -8.615850e-47 |
| Msa0124110 | Msa1454000 | 0.818952 | 1.498728e-52 | -8.615850e-47 |
| Msa0201330 | Msa1454000 | 0.814398 | 1.571980e-51 | -8.615850e-47 |
| Msa0201370 | Msa1454000 | 0.825441 | 4.680367e-54 | -8.615850e-47 |
| Msa1344010 | Msa1454000 | 0.803537 | 3.324589e-49 | -8.615850e-47 |
| Msa1026500 | Msa1454000 | 0.811631 | 6.355194e-51 | -8.615850e-47 |
| Msa1029090 | Msa1454000 | 0.823660 | 1.229207e-53 | -8.615850e-47 |
| Msa1044090 | Msa1454000 | 0.809091 | 2.245364e-50 | -8.615850e-47 |
| Msa1074570 | Msa1454000 | 0.801875 | 7.324066e-49 | -8.615850e-47 |
| Msa0243930 | Msa1454000 | 0.829478 | 5.033720e-55 | -8.615850e-47 |
| Msa0282590 | Msa1454000 | 0.839481 | 1.544196e-57 | -8.615850e-47 |
| Msa1111760 | Msa1454000 | 0.820323 | 7.287911e-53 | -8.615850e-47 |
| Msa1121660 | Msa1454000 | 0.807380 | 5.200028e-50 | -8.615850e-47 |
| Msa1154070 | Msa1454000 | 0.823975 | 1.036917e-53 | -8.615850e-47 |
| Msa1156180 | Msa1454000 | 0.820922 | 5.310614e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454000 | MtrunA17_Chr1g0206731 | 96.429 | 84 | 2 | 1 | 1 | 84 | 1 | 83 | 6.27e-49 | 160 |
| Msa1454000 | MtrunA17_Chr5g0393881 | 75.439 | 57 | 14 | 0 | 31 | 87 | 11 | 67 | 4.34e-25 | 98.2 |
| Msa1454000 | MtrunA17_Chr8g0366491 | 47.541 | 61 | 32 | 0 | 33 | 93 | 8 | 68 | 8.17e-14 | 67.8 |
| Msa1454000 | MtrunA17_Chr4g0059021 | 46.667 | 60 | 32 | 0 | 34 | 93 | 10 | 69 | 2.27e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454000 | AT4G33770.1 | 71.667 | 60 | 17 | 0 | 31 | 90 | 80 | 139 | 1.57e-22 | 92.8 |
| Msa1454000 | AT4G08170.2 | 54.348 | 92 | 41 | 1 | 3 | 93 | 11 | 102 | 1.13e-21 | 89.7 |
Find 118 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTTTGCACTACTTTATT+TGG | 0.121328 | tig0034984:+21694 | None:intergenic |
| CTTCATAAATATTTGAAAAT+AGG | 0.164201 | tig0034984:+22084 | None:intergenic |
| ATCAATCGCGGAACCGATTA+TGG | 0.164924 | tig0034984:+26902 | None:intergenic |
| CTAAAATATTTGTTGAAATA+TGG | 0.207446 | tig0034984:-21792 | Msa1454000:three_prime_UTR |
| TCTTACACTTGTTCTGCTTT+AGG | 0.209814 | tig0034984:+22231 | None:intergenic |
| TTTCATTAATGAAGGATTTC+AGG | 0.219791 | tig0034984:-24163 | Msa1454000:intron |
| GTAGATATGATTCGTGAATA+TGG | 0.249264 | tig0034984:-22442 | Msa1454000:three_prime_UTR |
| CATTTGGTATATAACATTAT+TGG | 0.256988 | tig0034984:+24526 | None:intergenic |
| ATTGATATCAATTACTTTCC+TGG | 0.288993 | tig0034984:-22397 | Msa1454000:intron |
| CTTGCAAGAGAAATGAAATT+TGG | 0.289856 | tig0034984:+26658 | None:intergenic |
| TATAGAAAAGAAGAGGAATT+AGG | 0.291933 | tig0034984:+27001 | None:intergenic |
| ACAAGGCTGGCTGAGCTTAT+AGG | 0.297593 | tig0034984:-24562 | Msa1454000:exon |
| AAAGATTTGATCTTTGAATC+AGG | 0.300677 | tig0034984:-26837 | Msa1454000:five_prime_UTR |
| ACTTGTTTGAATACTTGGTT+TGG | 0.321358 | tig0034984:+24782 | None:intergenic |
| TCTTTAAGATTTATATTGTT+GGG | 0.323070 | tig0034984:-22852 | Msa1454000:three_prime_UTR |
| TCATTCTCAATTTCCATAAT+CGG | 0.331055 | tig0034984:-26915 | Msa1454000:five_prime_UTR |
| CTTCCAACTTCTCTTGCTTT+AGG | 0.340512 | tig0034984:+22196 | None:intergenic |
| CTTGTTTGAATACTTGGTTT+GGG | 0.341169 | tig0034984:+24783 | None:intergenic |
| TATTGTTGGGGAATACATAA+AGG | 0.342629 | tig0034984:-22839 | Msa1454000:three_prime_UTR |
| AGCATGAACATTCTATTCAT+TGG | 0.350260 | tig0034984:+21898 | None:intergenic |
| AATAGAATGTTCATGCTTAG+TGG | 0.358768 | tig0034984:-21892 | Msa1454000:three_prime_UTR |
| CTCTTTAAGATTTATATTGT+TGG | 0.359704 | tig0034984:-22853 | Msa1454000:three_prime_UTR |
| ACACCCACCAAGACCTTTGT+TGG | 0.369643 | tig0034984:-22602 | Msa1454000:three_prime_UTR |
| CCAGCTTTGGTGACTTCATA+AGG | 0.370201 | tig0034984:+23693 | None:intergenic |
| GGCCGGACAACCACATCTTC+TGG | 0.373243 | tig0034984:-24887 | Msa1454000:CDS |
| AGCTCGCGTTTACTGATATT+AGG | 0.375570 | tig0034984:+22796 | None:intergenic |
| TAACAACATTGTCTATAAAC+TGG | 0.377901 | tig0034984:-21839 | Msa1454000:three_prime_UTR |
| ATTTGACATTGTCTTGCATA+AGG | 0.382180 | tig0034984:-25307 | Msa1454000:intron |
| TAGCGACTATCACAATAATA+TGG | 0.384536 | tig0034984:-24609 | Msa1454000:CDS |
| CCTTATGAAGTCACCAAAGC+TGG | 0.387765 | tig0034984:-23693 | Msa1454000:three_prime_UTR |
| GGAATCTCACCGGCAATACT+AGG | 0.399683 | tig0034984:+22697 | None:intergenic |
| TAACCAGACACGGTTGCATT+TGG | 0.400360 | tig0034984:+24510 | None:intergenic |
| GTTTATAGACAATGTTGTTA+AGG | 0.401644 | tig0034984:+21842 | None:intergenic |
| ATACCAAATGCAACCGTGTC+TGG | 0.408781 | tig0034984:-24513 | Msa1454000:three_prime_UTR |
| GTAAAGACGTGCTCGTAGTC+TGG | 0.410319 | tig0034984:+22269 | None:intergenic |
| CGGCAACTTCAACCCAGCTT+TGG | 0.416268 | tig0034984:+23680 | None:intergenic |
| GATCTTGATCCTAGTATTGC+CGG | 0.427389 | tig0034984:-22706 | Msa1454000:intron |
| CTACAAGAGTTTGTCAATCA+TGG | 0.430927 | tig0034984:-22978 | Msa1454000:intron |
| ATTGTTGTGAGTGATGAAAT+TGG | 0.432197 | tig0034984:+26947 | None:intergenic |
| TTCAGAGCTTGAACCTCCAC+TGG | 0.437347 | tig0034984:-23003 | Msa1454000:three_prime_UTR |
| ACTTCATAAGGAATAGTAGA+TGG | 0.444777 | tig0034984:+23705 | None:intergenic |
| AGCCTCTCCAACAAAGGTCT+TGG | 0.445162 | tig0034984:+22595 | None:intergenic |
| AAAAGAGCTTCGTCATAGAT+TGG | 0.446522 | tig0034984:-22569 | Msa1454000:intron |
| CTGCCTAAAGCAAGAGAAGT+TGG | 0.446556 | tig0034984:-22199 | Msa1454000:three_prime_UTR |
| TGGGTCAGAAAATTGTTGTT+GGG | 0.450840 | tig0034984:-26720 | Msa1454000:CDS |
| CATTAAGTACACGAGGAATC+TGG | 0.453868 | tig0034984:-24418 | Msa1454000:intron |
| TGTGTGTGTGTAATTTATAA+TGG | 0.455315 | tig0034984:+26975 | None:intergenic |
| ATCCAGAAGATGTGGTTGTC+CGG | 0.458056 | tig0034984:+24885 | None:intergenic |
| CTCTCCAACAAAGGTCTTGG+TGG | 0.458592 | tig0034984:+22598 | None:intergenic |
| TTGGGTCAGAAAATTGTTGT+TGG | 0.460458 | tig0034984:-26721 | Msa1454000:CDS |
| TAGATATGATTCGTGAATAT+GGG | 0.470110 | tig0034984:-22441 | Msa1454000:three_prime_UTR |
| GCTGCTGCACATGAAACTCT+TGG | 0.473192 | tig0034984:+22745 | None:intergenic |
| GCTGGCTGAGCTTATAGGTT+AGG | 0.474141 | tig0034984:-24557 | Msa1454000:exon |
| TGTAAATGTTGAATTGCATC+AGG | 0.481257 | tig0034984:+24107 | None:intergenic |
| CAAATTTCATTTCTCTTGCA+AGG | 0.481455 | tig0034984:-26657 | Msa1454000:intron |
| AAGATTTGATCTTTGAATCA+GGG | 0.482924 | tig0034984:-26836 | Msa1454000:five_prime_UTR |
| CACATGAAACTCTTGGAAAA+CGG | 0.483083 | tig0034984:+22752 | None:intergenic |
| ATTATGGAAATTGAGAATGA+TGG | 0.496147 | tig0034984:+26918 | None:intergenic |
| TTATGCAAGACAATGTCAAA+TGG | 0.500174 | tig0034984:+25309 | None:intergenic |
| CACCAAGACCTTTGTTGGAG+AGG | 0.502650 | tig0034984:-22597 | Msa1454000:three_prime_UTR |
| TTGTTTGAATACTTGGTTTG+GGG | 0.506145 | tig0034984:+24784 | None:intergenic |
| TGTTTGAATACTTGGTTTGG+GGG | 0.507717 | tig0034984:+24785 | None:intergenic |
| TCCAGTTGTTAGGCGAGGAA+TGG | 0.516509 | tig0034984:-25080 | Msa1454000:intron |
| GGATCAAGAACGAATACATC+GGG | 0.519070 | tig0034984:+24131 | None:intergenic |
| CCACATCTTGAAGCATGGAT+TGG | 0.521285 | tig0034984:+24078 | None:intergenic |
| CATCTTGAAGCATGGATTGG+CGG | 0.525990 | tig0034984:+24081 | None:intergenic |
| CTTTAAGATTTATATTGTTG+GGG | 0.527390 | tig0034984:-22851 | Msa1454000:three_prime_UTR |
| GCTGGGTTGAAGTTGCCGTT+AGG | 0.530540 | tig0034984:-23675 | Msa1454000:intron |
| TTTGCAAGCCTCTCCAACAA+AGG | 0.530921 | tig0034984:+22589 | None:intergenic |
| ATCCACCACATCTTGAAGCA+TGG | 0.535346 | tig0034984:+24073 | None:intergenic |
| AATGACATAAAACACATCCT+TGG | 0.546362 | tig0034984:+22417 | None:intergenic |
| TTTGGGAGTTGAGTATGACA+TGG | 0.550445 | tig0034984:-24918 | Msa1454000:CDS |
| AATTTCTTAAAGAACAAGGC+TGG | 0.550507 | tig0034984:-24575 | Msa1454000:CDS |
| TTATGGAAATTGAGAATGAT+GGG | 0.553021 | tig0034984:+26919 | None:intergenic |
| ATCAAATTTCTTAAAGAACA+AGG | 0.557356 | tig0034984:-24579 | Msa1454000:CDS |
| CCAATCCATGCTTCAAGATG+TGG | 0.557398 | tig0034984:-24078 | Msa1454000:three_prime_UTR |
| TGGTAGAAATTGGGACAGAG+TGG | 0.560116 | tig0034984:+21749 | None:intergenic |
| TATGTGTAATGCAGGAGCAA+GGG | 0.560921 | tig0034984:-25381 | Msa1454000:intron |
| AGATTTGATCTTTGAATCAG+GGG | 0.562044 | tig0034984:-26835 | Msa1454000:five_prime_UTR |
| GATGACTAACTTCTGACAGC+TGG | 0.564814 | tig0034984:-24451 | Msa1454000:three_prime_UTR |
| CTTATGAAGTCACCAAAGCT+GGG | 0.565266 | tig0034984:-23692 | Msa1454000:three_prime_UTR |
| TTATGTGTAATGCAGGAGCA+AGG | 0.565876 | tig0034984:-25382 | Msa1454000:intron |
| AGTTGCAAAACCTCTAGTTG+TGG | 0.567026 | tig0034984:-23078 | Msa1454000:three_prime_UTR |
| ATCCATGCTTCAAGATGTGG+TGG | 0.574463 | tig0034984:-24075 | Msa1454000:three_prime_UTR |
| GAGTATGACATGGAGGTGAT+TGG | 0.583214 | tig0034984:-24908 | Msa1454000:CDS |
| TCTGATCATGATTCATGATG+AGG | 0.583455 | tig0034984:+24822 | None:intergenic |
| CGCGAGCTATCAAAAGTCGC+AGG | 0.584140 | tig0034984:-22781 | Msa1454000:three_prime_UTR |
| AGATATAATGAAAGCTGCAT+CGG | 0.587786 | tig0034984:-24477 | Msa1454000:three_prime_UTR |
| ACTATCACAATAATATGGCA+TGG | 0.590368 | tig0034984:-24604 | Msa1454000:CDS |
| TATAATGAAAGCTGCATCGG+AGG | 0.592961 | tig0034984:-24474 | Msa1454000:three_prime_UTR |
| TCTCCAACAAAGGTCTTGGT+GGG | 0.597564 | tig0034984:+22599 | None:intergenic |
| ATGACATGGAGGTGATTGGC+CGG | 0.599011 | tig0034984:-24904 | Msa1454000:CDS |
| CTAAAGCAAGAGAAGTTGGA+AGG | 0.600540 | tig0034984:-22195 | Msa1454000:three_prime_UTR |
| GCACTGCCATCCACAACTAG+AGG | 0.603312 | tig0034984:+23068 | None:intergenic |
| AACAAGCCACTGTCAGAACA+AGG | 0.605835 | tig0034984:-25333 | Msa1454000:CDS |
| AAGCATATAACTAGCTACAA+AGG | 0.610187 | tig0034984:+21719 | None:intergenic |
| ATGTGTAATGCAGGAGCAAG+GGG | 0.610801 | tig0034984:-25380 | Msa1454000:intron |
| GAAATGAAATTTATCAATCG+CGG | 0.611747 | tig0034984:+26890 | None:intergenic |
| GCAAAACCTCTAGTTGTGGA+TGG | 0.613529 | tig0034984:-23074 | Msa1454000:three_prime_UTR |
| CTAAACTTATCTGAGTGCAA+TGG | 0.614593 | tig0034984:-24050 | Msa1454000:intron |
| TAAACTGGCACGAAATGCCA+AGG | 0.616821 | tig0034984:-21824 | Msa1454000:three_prime_UTR |
| ATCTATAAAATAACCAGACA+CGG | 0.620774 | tig0034984:+24500 | None:intergenic |
| ATAATGAAAGCTGCATCGGA+GGG | 0.621390 | tig0034984:-24473 | Msa1454000:three_prime_UTR |
| AGAAGTGATGGCGAAATCTG+AGG | 0.629932 | tig0034984:-26761 | Msa1454000:CDS |
| AATGGACCTTGTTCTGACAG+TGG | 0.636759 | tig0034984:+25327 | None:intergenic |
| AACTCTTGTAGAACCAGTGG+AGG | 0.639928 | tig0034984:+22990 | None:intergenic |
| AGGATCAAGAACGAATACAT+CGG | 0.641347 | tig0034984:+24130 | None:intergenic |
| ACAAACTCTTGTAGAACCAG+TGG | 0.644820 | tig0034984:+22987 | None:intergenic |
| TTGTAATAACTAGCTGACGA+GGG | 0.649097 | tig0034984:+23739 | None:intergenic |
| GATTCGTGAATATGGGACCA+AGG | 0.655124 | tig0034984:-22434 | Msa1454000:three_prime_UTR |
| GGGAATACATAAAGGTTGTG+AGG | 0.657084 | tig0034984:-22831 | Msa1454000:three_prime_UTR |
| GGGAGTTGAGTATGACATGG+AGG | 0.666502 | tig0034984:-24915 | Msa1454000:CDS |
| TTTGTAATAACTAGCTGACG+AGG | 0.667968 | tig0034984:+23738 | None:intergenic |
| AAATGTTGAATTGCATCAGG+AGG | 0.678092 | tig0034984:+24110 | None:intergenic |
| GGAATGGCGAGAGATCATTG+AGG | 0.697509 | tig0034984:-25064 | Msa1454000:intron |
| AATAATACATTAAGTACACG+AGG | 0.715214 | tig0034984:-24425 | Msa1454000:three_prime_UTR |
| TGTGTGGTATCCAGAAGATG+TGG | 0.719199 | tig0034984:+24877 | None:intergenic |
| AAATTATGTCAGAAGTTGTG+TGG | 0.741730 | tig0034984:+24861 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTGTTTTTTTTTTTTTAAAA+AGG | - | tig0034984:23529-23548 | Msa1454000:intron | 10.0% |
| !!! | AATTAGTAATTACATATTTT+CGG | + | tig0034984:24490-24509 | None:intergenic | 10.0% |
| !! | AAAATATGTAATTACTAATT+AGG | - | tig0034984:24490-24509 | Msa1454000:three_prime_UTR | 10.0% |
| !! | AAATATGTAATTACTAATTA+GGG | - | tig0034984:24491-24510 | Msa1454000:three_prime_UTR | 10.0% |
| !!! | TTTTTTAACTTTTTGTTTTA+CGG | - | tig0034984:26427-26446 | Msa1454000:intron | 10.0% |
| !!! | AGTGATTTTTTTTTTTTTAG+TGG | - | tig0034984:22191-22210 | Msa1454000:three_prime_UTR | 15.0% |
| !!! | ATTTTTTTTTTTTTAGTGGT+GGG | - | tig0034984:22195-22214 | Msa1454000:three_prime_UTR | 15.0% |
| !!! | AACTTAAGCTATATTTTTAT+CGG | - | tig0034984:23228-23247 | Msa1454000:intron | 15.0% |
| !!! | TTTTAAAAAGGTTTCATTTA+TGG | - | tig0034984:23541-23560 | Msa1454000:intron | 15.0% |
| !! | TTAATCTAAATAATTTGGTT+AGG | - | tig0034984:24007-24026 | Msa1454000:intron | 15.0% |
| !! | TATTGTAATTTATCTATTCA+TGG | + | tig0034984:24424-24443 | None:intergenic | 15.0% |
| !! | AACTTGAAAAAATGAAAAAA+AGG | + | tig0034984:24913-24932 | None:intergenic | 15.0% |
| !! | AAATTTGAAAGGAAAAAAAA+CGG | + | tig0034984:25648-25667 | None:intergenic | 15.0% |
| !!! | TCTTTAAGATTTATATTGTT+GGG | - | tig0034984:25896-25915 | Msa1454000:intron | 15.0% |
| !! | CTTCATAAATATTTGAAAAT+AGG | + | tig0034984:26667-26686 | None:intergenic | 15.0% |
| !!! | CTATTTTCAAATATTTATGA+AGG | - | tig0034984:26665-26684 | Msa1454000:CDS | 15.0% |
| !!! | CTAAAATATTTGTTGAAATA+TGG | - | tig0034984:26956-26975 | Msa1454000:five_prime_UTR | 15.0% |
| !! | ATGATCAAAAAGAAAATCAT+TGG | + | tig0034984:22135-22154 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTTTTTTAGTGG+TGG | - | tig0034984:22194-22213 | Msa1454000:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTTTTTAGTGGTG+GGG | - | tig0034984:22196-22215 | Msa1454000:three_prime_UTR | 20.0% |
| !!! | AAACTCTGTTTTTCTTTTTT+TGG | - | tig0034984:22303-22322 | Msa1454000:intron | 20.0% |
| !!! | TTCTTCTTTTATAACATTCA+TGG | - | tig0034984:23779-23798 | Msa1454000:intron | 20.0% |
| !! | AATCGTTAGTATTATTAGTT+TGG | - | tig0034984:23812-23831 | Msa1454000:intron | 20.0% |
| !!! | ATCGTTAGTATTATTAGTTT+GGG | - | tig0034984:23813-23832 | Msa1454000:intron | 20.0% |
| !! | TGTGGTTAATCTAAATAATT+TGG | - | tig0034984:24002-24021 | Msa1454000:intron | 20.0% |
| !! | ATCAAATTTCTTAAAGAACA+AGG | - | tig0034984:24169-24188 | Msa1454000:intron | 20.0% |
| !! | CATTTGGTATATAACATTAT+TGG | + | tig0034984:24225-24244 | None:intergenic | 20.0% |
| !! | AATCCTTCATTAATGAAAAA+GGG | + | tig0034984:24583-24602 | None:intergenic | 20.0% |
| !! | AAATCCTTCATTAATGAAAA+AGG | + | tig0034984:24584-24603 | None:intergenic | 20.0% |
| !!! | TCAACTATTTTTGTACTTTT+TGG | - | tig0034984:24870-24889 | Msa1454000:CDS | 20.0% |
| !! | GTATATTATATACTAGCTAT+TGG | - | tig0034984:25174-25193 | Msa1454000:intron | 20.0% |
| !!! | TCTTGTTTTCCTTTTTTATT+TGG | - | tig0034984:25854-25873 | Msa1454000:intron | 20.0% |
| !!! | CTTGTTTTCCTTTTTTATTT+GGG | - | tig0034984:25855-25874 | Msa1454000:intron | 20.0% |
| !!! | CTCTTTAAGATTTATATTGT+TGG | - | tig0034984:25895-25914 | Msa1454000:intron | 20.0% |
| !!! | CTTTAAGATTTATATTGTTG+GGG | - | tig0034984:25897-25916 | Msa1454000:intron | 20.0% |
| ! | TATAGAAAAGAAGAGGAATT+AGG | + | tig0034984:21750-21769 | None:intergenic | 25.0% |
| !!! | ATGGTTTTATAGAAAAGAAG+AGG | + | tig0034984:21757-21776 | None:intergenic | 25.0% |
| ! | TGTGTGTGTGTAATTTATAA+TGG | + | tig0034984:21776-21795 | None:intergenic | 25.0% |
| ! | TTATGGAAATTGAGAATGAT+GGG | + | tig0034984:21832-21851 | None:intergenic | 25.0% |
| ! | ATTATGGAAATTGAGAATGA+TGG | + | tig0034984:21833-21852 | None:intergenic | 25.0% |
| ! | TCATTCTCAATTTCCATAAT+CGG | - | tig0034984:21833-21852 | Msa1454000:three_prime_UTR | 25.0% |
| ! | GAAATGAAATTTATCAATCG+CGG | + | tig0034984:21861-21880 | None:intergenic | 25.0% |
| ! | AAAGATTTGATCTTTGAATC+AGG | - | tig0034984:21911-21930 | Msa1454000:three_prime_UTR | 25.0% |
| ! | AAGATTTGATCTTTGAATCA+GGG | - | tig0034984:21912-21931 | Msa1454000:three_prime_UTR | 25.0% |
| ! | AAGAAAAACAGAGTTTACAA+TGG | + | tig0034984:22299-22318 | None:intergenic | 25.0% |
| !!! | CTTTTGTTGTTACTTTTTGT+CGG | - | tig0034984:22328-22347 | Msa1454000:intron | 25.0% |
| !! | TACAAGAAATCTAAAAGTGT+CGG | + | tig0034984:22492-22511 | None:intergenic | 25.0% |
| ! | ATTGTTCATAAGAAAGATAC+CGG | - | tig0034984:22646-22665 | Msa1454000:intron | 25.0% |
| !! | TTCCTTGTAATTTTAAATCC+CGG | + | tig0034984:22668-22687 | None:intergenic | 25.0% |
| !! | TATAATTTGTCTTTGTGAGA+TGG | - | tig0034984:22689-22708 | Msa1454000:intron | 25.0% |
| !!! | TAATTTTTTACGAGAATCAG+AGG | - | tig0034984:22712-22731 | Msa1454000:three_prime_UTR | 25.0% |
| ! | AAAACTTACATGACTTTACA+TGG | - | tig0034984:22795-22814 | Msa1454000:three_prime_UTR | 25.0% |
| ! | CAAATCAATATTGTCAACTA+TGG | + | tig0034984:23094-23113 | None:intergenic | 25.0% |
| !! | CATAGTTGACAATATTGATT+TGG | - | tig0034984:23092-23111 | Msa1454000:intron | 25.0% |
| !!! | AATATTGATTTGGATAGTCA+AGG | - | tig0034984:23102-23121 | Msa1454000:intron | 25.0% |
| !!! | ATTTTTATCGGTTCAATGTT+TGG | - | tig0034984:23240-23259 | Msa1454000:intron | 25.0% |
| !! | CTGCATTACACATAATTTTT+AGG | + | tig0034984:23361-23380 | None:intergenic | 25.0% |
| ! | CTAAAAATTATGTGTAATGC+AGG | - | tig0034984:23359-23378 | Msa1454000:intron | 25.0% |
| ! | TAAATAATTTGGTTAGGCAT+TGG | - | tig0034984:24013-24032 | Msa1454000:intron | 25.0% |
| ! | ATCTATAAAATAACCAGACA+CGG | + | tig0034984:24251-24270 | None:intergenic | 25.0% |
| ! | AATAATACATTAAGTACACG+AGG | - | tig0034984:24323-24342 | Msa1454000:intron | 25.0% |
| !! | AAAAAGTCAAATTTCTGAAG+AGG | + | tig0034984:24360-24379 | None:intergenic | 25.0% |
| ! | ATCCTTCATTAATGAAAAAG+GGG | + | tig0034984:24582-24601 | None:intergenic | 25.0% |
| ! | TTTCATTAATGAAGGATTTC+AGG | - | tig0034984:24585-24604 | Msa1454000:CDS | 25.0% |
| !!! | CTTAACTACTGTTGTTTTAT+AGG | - | tig0034984:24974-24993 | Msa1454000:intron | 25.0% |
| ! | CTAGAATATATCTGGTTAAT+AGG | - | tig0034984:25141-25160 | Msa1454000:intron | 25.0% |
| !! | ATAACAGTGTTGTTAAATAG+CGG | - | tig0034984:25229-25248 | Msa1454000:intron | 25.0% |
| !! | TTGACAACATTTTGTACAAA+TGG | + | tig0034984:25313-25332 | None:intergenic | 25.0% |
| !!! | TTGTTTTATTAGCCAAAGAT+TGG | - | tig0034984:25493-25512 | Msa1454000:intron | 25.0% |
| ! | CTAAATAGTAAACCAATCTT+TGG | + | tig0034984:25508-25527 | None:intergenic | 25.0% |
| ! | TTTGCAACTGAAAATTTGAA+AGG | + | tig0034984:25659-25678 | None:intergenic | 25.0% |
| ! | AGTTGAAATGTTTCATCTTA+TGG | + | tig0034984:26103-26122 | None:intergenic | 25.0% |
| ! | TAGATATGATTCGTGAATAT+GGG | - | tig0034984:26307-26326 | Msa1454000:intron | 25.0% |
| ! | ATTGATATCAATTACTTTCC+TGG | - | tig0034984:26351-26370 | Msa1454000:intron | 25.0% |
| ! | GTTTATAGACAATGTTGTTA+AGG | + | tig0034984:26909-26928 | None:intergenic | 25.0% |
| ! | TAACAACATTGTCTATAAAC+TGG | - | tig0034984:26909-26928 | Msa1454000:five_prime_UTR | 25.0% |
| ! | AAAGTTTGCACTACTTTATT+TGG | + | tig0034984:27057-27076 | None:intergenic | 25.0% |
| !!! | TGTGGATTGGGATTTTTTTT+GGG | + | tig0034984:21697-21716 | None:intergenic | 30.0% |
| ! | AGAAAGAAAAAGTGTGGATT+GGG | + | tig0034984:21709-21728 | None:intergenic | 30.0% |
| ATTGTTGTGAGTGATGAAAT+TGG | + | tig0034984:21804-21823 | None:intergenic | 30.0% | |
| AGATTTGATCTTTGAATCAG+GGG | - | tig0034984:21913-21932 | Msa1454000:three_prime_UTR | 30.0% | |
| ! | ATTTTCGGTATGAGACTAAA+CGG | - | tig0034984:21937-21956 | Msa1454000:three_prime_UTR | 30.0% |
| ! | ACAATTTTCTGACCCAAAAA+CGG | + | tig0034984:22024-22043 | None:intergenic | 30.0% |
| CTTGCAAGAGAAATGAAATT+TGG | + | tig0034984:22093-22112 | None:intergenic | 30.0% | |
| CAAATTTCATTTCTCTTGCA+AGG | - | tig0034984:22091-22110 | Msa1454000:three_prime_UTR | 30.0% | |
| TTCTTGTAAACATACCAAAC+TGG | - | tig0034984:22504-22523 | Msa1454000:intron | 30.0% | |
| !! | GGTAATCTTGTTATTGTCTT+TGG | - | tig0034984:22537-22556 | Msa1454000:intron | 30.0% |
| ! | CAAAGGTTGAGCATAAATTT+TGG | + | tig0034984:22587-22606 | None:intergenic | 30.0% |
| CAAAATTTATGCTCAACCTT+TGG | - | tig0034984:22585-22604 | Msa1454000:three_prime_UTR | 30.0% | |
| TTGTTCATAAGAAAGATACC+GGG | - | tig0034984:22647-22666 | Msa1454000:intron | 30.0% | |
| ! | TACCGGGATTTAAAATTACA+AGG | - | tig0034984:22663-22682 | Msa1454000:intron | 30.0% |
| ! | TTGACTCTTGATCTTTTGAT+TGG | - | tig0034984:22852-22871 | Msa1454000:three_prime_UTR | 30.0% |
| TCAAATTCCACAACACTATT+AGG | + | tig0034984:22978-22997 | None:intergenic | 30.0% | |
| ! | ATATTGTCAACTATGGATTG+CGG | + | tig0034984:23087-23106 | None:intergenic | 30.0% |
| ! | ATATCAAACAAGAGCACAAA+AGG | + | tig0034984:23134-23153 | None:intergenic | 30.0% |
| AAATTATTAACACTCAGCAG+TGG | - | tig0034984:23181-23200 | Msa1454000:intron | 30.0% | |
| !! | TACATGGTTCAAAGTTTTGA+TGG | - | tig0034984:23310-23329 | Msa1454000:intron | 30.0% |
| !! | CACATAATTTTTAGGCATTC+AGG | + | tig0034984:23353-23372 | None:intergenic | 30.0% |
| TTATGCAAGACAATGTCAAA+TGG | + | tig0034984:23442-23461 | None:intergenic | 30.0% | |
| ATTTGACATTGTCTTGCATA+AGG | - | tig0034984:23441-23460 | Msa1454000:intron | 30.0% | |
| !! | TTATGGTTTTGCTGAATTTG+TGG | - | tig0034984:23558-23577 | Msa1454000:intron | 30.0% |
| ATTTGTTCTTTCCAGTTGTT+AGG | - | tig0034984:23658-23677 | Msa1454000:intron | 30.0% | |
| TACAAGTACAATGTGAAAGT+AGG | + | tig0034984:23733-23752 | None:intergenic | 30.0% | |
| AAATTATGTCAGAAGTTGTG+TGG | + | tig0034984:23890-23909 | None:intergenic | 30.0% | |
| ! | TTGTTTGAATACTTGGTTTG+GGG | + | tig0034984:23967-23986 | None:intergenic | 30.0% |
| CTTGTTTGAATACTTGGTTT+GGG | + | tig0034984:23968-23987 | None:intergenic | 30.0% | |
| ACTTGTTTGAATACTTGGTT+TGG | + | tig0034984:23969-23988 | None:intergenic | 30.0% | |
| CAGACAATAATTCGTTCTTT+GGG | + | tig0034984:24051-24070 | None:intergenic | 30.0% | |
| ACAGACAATAATTCGTTCTT+TGG | + | tig0034984:24052-24071 | None:intergenic | 30.0% | |
| ! | ACGAATTATTGTCTGTCTTT+TGG | - | tig0034984:24056-24075 | Msa1454000:three_prime_UTR | 30.0% |
| TAGCGACTATCACAATAATA+TGG | - | tig0034984:24139-24158 | Msa1454000:three_prime_UTR | 30.0% | |
| ACTATCACAATAATATGGCA+TGG | - | tig0034984:24144-24163 | Msa1454000:three_prime_UTR | 30.0% | |
| AATTTCTTAAAGAACAAGGC+TGG | - | tig0034984:24173-24192 | Msa1454000:intron | 30.0% | |
| AGATATAATGAAAGCTGCAT+CGG | - | tig0034984:24271-24290 | Msa1454000:intron | 30.0% | |
| ATCTATTCATGGAACTATTC+AGG | + | tig0034984:24413-24432 | None:intergenic | 30.0% | |
| GCTATGAATATTTGGAAGAA+AGG | + | tig0034984:24464-24483 | None:intergenic | 30.0% | |
| TACAAACTTCATGGAGAATT+TGG | + | tig0034984:24532-24551 | None:intergenic | 30.0% | |
| CCATCAAAATACAAACTTCA+TGG | + | tig0034984:24541-24560 | None:intergenic | 30.0% | |
| !! | CCATGAAGTTTGTATTTTGA+TGG | - | tig0034984:24538-24557 | Msa1454000:three_prime_UTR | 30.0% |
| !! | TTCCCCTTTTTCATTAATGA+AGG | - | tig0034984:24577-24596 | Msa1454000:CDS | 30.0% |
| TGTAAATGTTGAATTGCATC+AGG | + | tig0034984:24644-24663 | None:intergenic | 30.0% | |
| TACAATCCTAAAACTTTCAG+GGG | + | tig0034984:24778-24797 | None:intergenic | 30.0% | |
| GTACAATCCTAAAACTTTCA+GGG | + | tig0034984:24779-24798 | None:intergenic | 30.0% | |
| TGTACAATCCTAAAACTTTC+AGG | + | tig0034984:24780-24799 | None:intergenic | 30.0% | |
| ACTTCATAAGGAATAGTAGA+TGG | + | tig0034984:25046-25065 | None:intergenic | 30.0% | |
| AATCAAAGATACACACCTAA+CGG | + | tig0034984:25091-25110 | None:intergenic | 30.0% | |
| TCTCTAGACTAGAATATATC+TGG | - | tig0034984:25133-25152 | Msa1454000:intron | 30.0% | |
| ! | AGAACCTTGTTTGTATCATT+CGG | - | tig0034984:25454-25473 | Msa1454000:intron | 30.0% |
| ATATCCGAATGATACAAACA+AGG | + | tig0034984:25461-25480 | None:intergenic | 30.0% | |
| AATCTTCTGATTATCCTGAT+TGG | - | tig0034984:25561-25580 | Msa1454000:intron | 30.0% | |
| ATCTTCTGATTATCCTGATT+GGG | - | tig0034984:25562-25581 | Msa1454000:intron | 30.0% | |
| ! | ATATTTGAAACAACCCAATC+AGG | + | tig0034984:25578-25597 | None:intergenic | 30.0% |
| AATAACACACAGAATGATTG+CGG | + | tig0034984:25816-25835 | None:intergenic | 30.0% | |
| TGCAATGTCCCAAATAAAAA+AGG | + | tig0034984:25866-25885 | None:intergenic | 30.0% | |
| !!! | TTTTTTATTTGGGACATTGC+AGG | - | tig0034984:25865-25884 | Msa1454000:intron | 30.0% |
| TATTGTTGGGGAATACATAA+AGG | - | tig0034984:25909-25928 | Msa1454000:intron | 30.0% | |
| !!! | GAATTTTTTTGGAATCTCAC+CGG | + | tig0034984:26064-26083 | None:intergenic | 30.0% |
| TGAAATGTTTCATCTTATGG+TGG | + | tig0034984:26100-26119 | None:intergenic | 30.0% | |
| GTAGATATGATTCGTGAATA+TGG | - | tig0034984:26306-26325 | Msa1454000:intron | 30.0% | |
| AATGACATAAAACACATCCT+TGG | + | tig0034984:26334-26353 | None:intergenic | 30.0% | |
| TATAACTTATCTGCATTCCA+TGG | - | tig0034984:26378-26397 | Msa1454000:intron | 30.0% | |
| AGCATGAACATTCTATTCAT+TGG | + | tig0034984:26853-26872 | None:intergenic | 30.0% | |
| AATAGAATGTTCATGCTTAG+TGG | - | tig0034984:26856-26875 | Msa1454000:five_prime_UTR | 30.0% | |
| !!! | TATTTTAGCAGCATTATCCT+TGG | + | tig0034984:26944-26963 | None:intergenic | 30.0% |
| !! | GGTACTTTTTGGTAGAAATT+GGG | + | tig0034984:27011-27030 | None:intergenic | 30.0% |
| !! | AGGTACTTTTTGGTAGAAAT+TGG | + | tig0034984:27012-27031 | None:intergenic | 30.0% |
| AAGCATATAACTAGCTACAA+AGG | + | tig0034984:27032-27051 | None:intergenic | 30.0% | |
| !!! | GTGTGGATTGGGATTTTTTT+TGG | + | tig0034984:21698-21717 | None:intergenic | 35.0% |
| ! | GAGAAAGAAAAAGTGTGGAT+TGG | + | tig0034984:21710-21729 | None:intergenic | 35.0% |
| !!! | CTTTGAATCAGGGGTATTTT+CGG | - | tig0034984:21922-21941 | Msa1454000:three_prime_UTR | 35.0% |
| AGAAGAAGAAGAAGAAGTGA+TGG | - | tig0034984:21975-21994 | Msa1454000:three_prime_UTR | 35.0% | |
| TTGGGTCAGAAAATTGTTGT+TGG | - | tig0034984:22027-22046 | Msa1454000:three_prime_UTR | 35.0% | |
| ! | TGGGTCAGAAAATTGTTGTT+GGG | - | tig0034984:22028-22047 | Msa1454000:three_prime_UTR | 35.0% |
| TTGAGCTACAGACATTACAT+CGG | + | tig0034984:22441-22460 | None:intergenic | 35.0% | |
| !! | TACCAAACTGGTTTGTTTCT+TGG | - | tig0034984:22516-22535 | Msa1454000:intron | 35.0% |
| TACCAAGAAACAAACCAGTT+TGG | + | tig0034984:22521-22540 | None:intergenic | 35.0% | |
| !! | CAATGTATGAGTTTTGACCT+CGG | + | tig0034984:22630-22649 | None:intergenic | 35.0% |
| ! | AATGAGGGCATAAATGATTG+CGG | + | tig0034984:22911-22930 | None:intergenic | 35.0% |
| AAAACCTTGTCGCTAAATGA+GGG | + | tig0034984:22926-22945 | None:intergenic | 35.0% | |
| TCTATGCAAGAATGCTATAG+AGG | + | tig0034984:23041-23060 | None:intergenic | 35.0% | |
| TTGAACCATGTATTCAACCA+AGG | + | tig0034984:23302-23321 | None:intergenic | 35.0% | |
| TCTGATCATGATTCATGATG+AGG | + | tig0034984:23929-23948 | None:intergenic | 35.0% | |
| !! | TGTTTGAATACTTGGTTTGG+GGG | + | tig0034984:23966-23985 | None:intergenic | 35.0% |
| ACCAAGTATTCAAACAAGTG+AGG | - | tig0034984:23970-23989 | Msa1454000:intron | 35.0% | |
| TCCTCACTTGTTTGAATACT+TGG | + | tig0034984:23974-23993 | None:intergenic | 35.0% | |
| !! | CAAGTGAGGATTTACTTTTG+TGG | - | tig0034984:23984-24003 | Msa1454000:intron | 35.0% |
| !! | ATAATTTGGTTAGGCATTGG+TGG | - | tig0034984:24016-24035 | Msa1454000:intron | 35.0% |
| TATTCATGGAACTATTCAGG+AGG | + | tig0034984:24410-24429 | None:intergenic | 35.0% | |
| TTCGGTGAGCTATGAATATT+TGG | + | tig0034984:24472-24491 | None:intergenic | 35.0% | |
| !!! | TGTATTTTGATGGAGCTGAT+TGG | - | tig0034984:24548-24567 | Msa1454000:three_prime_UTR | 35.0% |
| AGGATCAAGAACGAATACAT+CGG | + | tig0034984:24621-24640 | None:intergenic | 35.0% | |
| AAATGTTGAATTGCATCAGG+AGG | + | tig0034984:24641-24660 | None:intergenic | 35.0% | |
| CTAAACTTATCTGAGTGCAA+TGG | - | tig0034984:24698-24717 | Msa1454000:intron | 35.0% | |
| !! | CAAGTTGATTATGTATCGCA+TGG | - | tig0034984:24927-24946 | Msa1454000:intron | 35.0% |
| !!! | CTACTGTTGTTTTATAGGCA+AGG | - | tig0034984:24979-24998 | Msa1454000:intron | 35.0% |
| !!! | TGTTGTTTTATAGGCAAGGT+TGG | - | tig0034984:24983-25002 | Msa1454000:intron | 35.0% |
| TTGTAATAACTAGCTGACGA+GGG | + | tig0034984:25012-25031 | None:intergenic | 35.0% | |
| TTTGTAATAACTAGCTGACG+AGG | + | tig0034984:25013-25032 | None:intergenic | 35.0% | |
| TTTGTACAAATGGCATATCG+TGG | + | tig0034984:25303-25322 | None:intergenic | 35.0% | |
| TTGTCAAATAGCAGCTATAG+CGG | - | tig0034984:25326-25345 | Msa1454000:CDS | 35.0% | |
| !!! | AGTTGACTTGTGCATTTTCA+TGG | - | tig0034984:25530-25549 | Msa1454000:intron | 35.0% |
| CTACAAGAGTTTGTCAATCA+TGG | - | tig0034984:25770-25789 | Msa1454000:intron | 35.0% | |
| CACATGAAACTCTTGGAAAA+CGG | + | tig0034984:25999-26018 | None:intergenic | 35.0% | |
| AATGTTTCATCTTATGGTGG+TGG | + | tig0034984:26097-26116 | None:intergenic | 35.0% | |
| AAAAGAGCTTCGTCATAGAT+TGG | - | tig0034984:26179-26198 | Msa1454000:intron | 35.0% | |
| TGCAACCATATTTCTTTCCT+AGG | - | tig0034984:26226-26245 | Msa1454000:intron | 35.0% | |
| GTATTAGTAAATCATCGCCT+AGG | + | tig0034984:26246-26265 | None:intergenic | 35.0% | |
| GCAGATAAGTTATACTTACC+AGG | + | tig0034984:26372-26391 | None:intergenic | 35.0% | |
| ! | ATTTTTCCATACCCTGCATT+CGG | + | tig0034984:26458-26477 | None:intergenic | 35.0% |
| TCTTACACTTGTTCTGCTTT+AGG | + | tig0034984:26520-26539 | None:intergenic | 35.0% | |
| !!! | CTAGCTACAAAGGTACTTTT+TGG | + | tig0034984:27022-27041 | None:intergenic | 35.0% |
| GCAGAGAGAAAGAAAAAGTG+TGG | + | tig0034984:21715-21734 | None:intergenic | 40.0% | |
| CTGTGCAGTGTATTATTTGC+TGG | - | tig0034984:22249-22268 | Msa1454000:three_prime_UTR | 40.0% | |
| CTCAATATGGACAACTCCAA+AGG | + | tig0034984:22604-22623 | None:intergenic | 40.0% | |
| TTGTCCATATTGAGAATCCG+AGG | - | tig0034984:22610-22629 | Msa1454000:intron | 40.0% | |
| TTGACCTCGGATTCTCAATA+TGG | + | tig0034984:22617-22636 | None:intergenic | 40.0% | |
| GAAAACCTTGTCGCTAAATG+AGG | + | tig0034984:22927-22946 | None:intergenic | 40.0% | |
| ! | ACTATGGATTGCGGAAATAG+AGG | + | tig0034984:23078-23097 | None:intergenic | 40.0% |
| ! | ATGTTTGGAGTTACCACTGT+CGG | - | tig0034984:23255-23274 | Msa1454000:intron | 40.0% |
| CATGTATTCAACCAAGGAAG+TGG | + | tig0034984:23296-23315 | None:intergenic | 40.0% | |
| CACTTCCTTGGTTGAATACA+TGG | - | tig0034984:23294-23313 | Msa1454000:intron | 40.0% | |
| TTATGTGTAATGCAGGAGCA+AGG | - | tig0034984:23366-23385 | Msa1454000:intron | 40.0% | |
| TATGTGTAATGCAGGAGCAA+GGG | - | tig0034984:23367-23386 | Msa1454000:intron | 40.0% | |
| TTTGGGAGTTGAGTATGACA+TGG | - | tig0034984:23830-23849 | Msa1454000:intron | 40.0% | |
| TATAATGAAAGCTGCATCGG+AGG | - | tig0034984:24274-24293 | Msa1454000:intron | 40.0% | |
| ATAATGAAAGCTGCATCGGA+GGG | - | tig0034984:24275-24294 | Msa1454000:intron | 40.0% | |
| CATTAAGTACACGAGGAATC+TGG | - | tig0034984:24330-24349 | Msa1454000:intron | 40.0% | |
| GGATCAAGAACGAATACATC+GGG | + | tig0034984:24620-24639 | None:intergenic | 40.0% | |
| CTAAAACTTTCAGGGGAGAT+TGG | + | tig0034984:24771-24790 | None:intergenic | 40.0% | |
| ! | CAATCTCCCCTGAAAGTTTT+AGG | - | tig0034984:24769-24788 | Msa1454000:intron | 40.0% |
| CGTACATCTTGCTCTTGTAT+TGG | - | tig0034984:24838-24857 | Msa1454000:CDS | 40.0% | |
| CTTATGAAGTCACCAAAGCT+GGG | - | tig0034984:25056-25075 | Msa1454000:intron | 40.0% | |
| !! | TAGCAGCTATAGCGGATTAA+CGG | - | tig0034984:25334-25353 | Msa1454000:CDS | 40.0% |
| AGTTGCAAAACCTCTAGTTG+TGG | - | tig0034984:25670-25689 | Msa1454000:intron | 40.0% | |
| ACAAACTCTTGTAGAACCAG+TGG | + | tig0034984:25764-25783 | None:intergenic | 40.0% | |
| ! | TTTATTTGGGACATTGCAGG+TGG | - | tig0034984:25868-25887 | Msa1454000:intron | 40.0% |
| GGGAATACATAAAGGTTGTG+AGG | - | tig0034984:25917-25936 | Msa1454000:intron | 40.0% | |
| AGCTCGCGTTTACTGATATT+AGG | + | tig0034984:25955-25974 | None:intergenic | 40.0% | |
| GATCTTGATCCTAGTATTGC+CGG | - | tig0034984:26042-26061 | Msa1454000:intron | 40.0% | |
| !!! | GTGGGAAAGGGGAATTTTTT+TGG | + | tig0034984:26075-26094 | None:intergenic | 40.0% |
| !! | TTTCATCTTATGGTGGTGGT+GGG | + | tig0034984:26093-26112 | None:intergenic | 40.0% |
| CATCGCCTAGGAAAGAAATA+TGG | + | tig0034984:26234-26253 | None:intergenic | 40.0% | |
| TGAATTGCAATGCCGTCTAT+AGG | - | tig0034984:26266-26285 | Msa1454000:intron | 40.0% | |
| GAATTGCAATGCCGTCTATA+GGG | - | tig0034984:26267-26286 | Msa1454000:intron | 40.0% | |
| TTGATTTCTGTCAGAGACCA+TGG | + | tig0034984:26398-26417 | None:intergenic | 40.0% | |
| ! | TTTACGGTTTTTCCGAATGC+AGG | - | tig0034984:26443-26462 | Msa1454000:intron | 40.0% |
| ! | TTACGGTTTTTCCGAATGCA+GGG | - | tig0034984:26444-26463 | Msa1454000:intron | 40.0% |
| CTTCCAACTTCTCTTGCTTT+AGG | + | tig0034984:26555-26574 | None:intergenic | 40.0% | |
| CTAAAGCAAGAGAAGTTGGA+AGG | - | tig0034984:26553-26572 | Msa1454000:intron | 40.0% | |
| ATCAATCGCGGAACCGATTA+TGG | + | tig0034984:21849-21868 | None:intergenic | 45.0% | |
| ! | AGAAGTGATGGCGAAATCTG+AGG | - | tig0034984:21987-22006 | Msa1454000:three_prime_UTR | 45.0% |
| !! | GTGAGTACGACACCGTTTTT+GGG | - | tig0034984:22009-22028 | Msa1454000:three_prime_UTR | 45.0% |
| !! | CTAAAAGTGTCGGTCACGAA+TGG | + | tig0034984:22482-22501 | None:intergenic | 45.0% |
| TATGCCCTCATTTAGCGACA+AGG | - | tig0034984:22919-22938 | Msa1454000:intron | 45.0% | |
| GGCTACAGCACAGATGATTT+GGG | + | tig0034984:22957-22976 | None:intergenic | 45.0% | |
| AGGCTACAGCACAGATGATT+TGG | + | tig0034984:22958-22977 | None:intergenic | 45.0% | |
| GCTGTAGCCTAATAGTGTTG+TGG | - | tig0034984:22968-22987 | Msa1454000:intron | 45.0% | |
| GTGGTTGATCTCAGTAGAAG+TGG | - | tig0034984:23200-23219 | Msa1454000:intron | 45.0% | |
| ! | TGTTTGGAGTTACCACTGTC+GGG | - | tig0034984:23256-23275 | Msa1454000:intron | 45.0% |
| ! | GTTTTACCTGACCACTTCCT+TGG | - | tig0034984:23282-23301 | Msa1454000:intron | 45.0% |
| ATTCAACCAAGGAAGTGGTC+AGG | + | tig0034984:23291-23310 | None:intergenic | 45.0% | |
| ATGTGTAATGCAGGAGCAAG+GGG | - | tig0034984:23368-23387 | Msa1454000:intron | 45.0% | |
| AACAAGCCACTGTCAGAACA+AGG | - | tig0034984:23415-23434 | Msa1454000:intron | 45.0% | |
| AATGGACCTTGTTCTGACAG+TGG | + | tig0034984:23424-23443 | None:intergenic | 45.0% | |
| TTCTTTCCAGTTGTTAGGCG+AGG | - | tig0034984:23663-23682 | Msa1454000:intron | 45.0% | |
| TGAAAGTAGGCTGAAGTGAG+TGG | + | tig0034984:23720-23739 | None:intergenic | 45.0% | |
| GAGTATGACATGGAGGTGAT+TGG | - | tig0034984:23840-23859 | Msa1454000:intron | 45.0% | |
| ATCCAGAAGATGTGGTTGTC+CGG | + | tig0034984:23866-23885 | None:intergenic | 45.0% | |
| TGTGTGGTATCCAGAAGATG+TGG | + | tig0034984:23874-23893 | None:intergenic | 45.0% | |
| ATACCAAATGCAACCGTGTC+TGG | - | tig0034984:24235-24254 | Msa1454000:intron | 45.0% | |
| TAACCAGACACGGTTGCATT+TGG | + | tig0034984:24241-24260 | None:intergenic | 45.0% | |
| GATGACTAACTTCTGACAGC+TGG | - | tig0034984:24297-24316 | Msa1454000:intron | 45.0% | |
| !! | CATCTTGAAGCATGGATTGG+CGG | + | tig0034984:24670-24689 | None:intergenic | 45.0% |
| CCACATCTTGAAGCATGGAT+TGG | + | tig0034984:24673-24692 | None:intergenic | 45.0% | |
| CCAATCCATGCTTCAAGATG+TGG | - | tig0034984:24670-24689 | Msa1454000:intron | 45.0% | |
| ATCCATGCTTCAAGATGTGG+TGG | - | tig0034984:24673-24692 | Msa1454000:intron | 45.0% | |
| ATCCACCACATCTTGAAGCA+TGG | + | tig0034984:24678-24697 | None:intergenic | 45.0% | |
| ! | CCAGCTTTGGTGACTTCATA+AGG | + | tig0034984:25058-25077 | None:intergenic | 45.0% |
| CCTTATGAAGTCACCAAAGC+TGG | - | tig0034984:25055-25074 | Msa1454000:intron | 45.0% | |
| TAGCTATTGGCACCTTTCTG+CGG | - | tig0034984:25187-25206 | Msa1454000:intron | 45.0% | |
| AACCAATCAATGCCGCAGAA+AGG | + | tig0034984:25202-25221 | None:intergenic | 45.0% | |
| GTGTTGTCAATAGCAGGTCA+CGG | + | tig0034984:25406-25425 | None:intergenic | 45.0% | |
| TGACCTGCTATTGACAACAC+TGG | - | tig0034984:25406-25425 | Msa1454000:intron | 45.0% | |
| GCAAAACCTCTAGTTGTGGA+TGG | - | tig0034984:25674-25693 | Msa1454000:intron | 45.0% | |
| AACTCTTGTAGAACCAGTGG+AGG | + | tig0034984:25761-25780 | None:intergenic | 45.0% | |
| !! | GTTTCATCTTATGGTGGTGG+TGG | + | tig0034984:26094-26113 | None:intergenic | 45.0% |
| TCTCCAACAAAGGTCTTGGT+GGG | + | tig0034984:26152-26171 | None:intergenic | 45.0% | |
| TTTGCAAGCCTCTCCAACAA+AGG | + | tig0034984:26162-26181 | None:intergenic | 45.0% | |
| ACAAGCGAAGTCCCTATAGA+CGG | + | tig0034984:26281-26300 | None:intergenic | 45.0% | |
| GATTCGTGAATATGGGACCA+AGG | - | tig0034984:26314-26333 | Msa1454000:intron | 45.0% | |
| ! | GTTTTTCCGAATGCAGGGTA+TGG | - | tig0034984:26449-26468 | Msa1454000:intron | 45.0% |
| CTGCCTAAAGCAAGAGAAGT+TGG | - | tig0034984:26549-26568 | Msa1454000:intron | 45.0% | |
| TAAACTGGCACGAAATGCCA+AGG | - | tig0034984:26924-26943 | Msa1454000:five_prime_UTR | 45.0% | |
| TGGTAGAAATTGGGACAGAG+TGG | + | tig0034984:27002-27021 | None:intergenic | 45.0% | |
| ! | GGTGAGTACGACACCGTTTT+TGG | - | tig0034984:22008-22027 | Msa1454000:three_prime_UTR | 50.0% |
| ! | GTTTGGAGTTACCACTGTCG+GGG | - | tig0034984:23257-23276 | Msa1454000:intron | 50.0% |
| ! | TTTGGAGTTACCACTGTCGG+GGG | - | tig0034984:23258-23277 | Msa1454000:intron | 50.0% |
| TCCAGTTGTTAGGCGAGGAA+TGG | - | tig0034984:23668-23687 | Msa1454000:intron | 50.0% | |
| GGAATGGCGAGAGATCATTG+AGG | - | tig0034984:23684-23703 | Msa1454000:three_prime_UTR | 50.0% | |
| GGGAGTTGAGTATGACATGG+AGG | - | tig0034984:23833-23852 | Msa1454000:intron | 50.0% | |
| ATGACATGGAGGTGATTGGC+CGG | - | tig0034984:23844-23863 | Msa1454000:intron | 50.0% | |
| ! | ACAAGGCTGGCTGAGCTTAT+AGG | - | tig0034984:24186-24205 | Msa1454000:intron | 50.0% |
| GCTGGCTGAGCTTATAGGTT+AGG | - | tig0034984:24191-24210 | Msa1454000:intron | 50.0% | |
| !! | CACCTTTCTGCGGCATTGAT+TGG | - | tig0034984:25197-25216 | Msa1454000:intron | 50.0% |
| !! | TAGCGGATTAACGGCGCTAT+AGG | - | tig0034984:25343-25362 | Msa1454000:CDS | 50.0% |
| !! | AGCGGATTAACGGCGCTATA+GGG | - | tig0034984:25344-25363 | Msa1454000:CDS | 50.0% |
| GAGCCAGTGTTGTCAATAGC+AGG | + | tig0034984:25412-25431 | None:intergenic | 50.0% | |
| TTCAGAGCTTGAACCTCCAC+TGG | - | tig0034984:25745-25764 | Msa1454000:intron | 50.0% | |
| GCTGCTGCACATGAAACTCT+TGG | + | tig0034984:26006-26025 | None:intergenic | 50.0% | |
| GGAATCTCACCGGCAATACT+AGG | + | tig0034984:26054-26073 | None:intergenic | 50.0% | |
| !! | TTATGGTGGTGGTGGGAAAG+GGG | + | tig0034984:26086-26105 | None:intergenic | 50.0% |
| !! | CTTATGGTGGTGGTGGGAAA+GGG | + | tig0034984:26087-26106 | None:intergenic | 50.0% |
| !! | TCTTATGGTGGTGGTGGGAA+AGG | + | tig0034984:26088-26107 | None:intergenic | 50.0% |
| ACACCCACCAAGACCTTTGT+TGG | - | tig0034984:26146-26165 | Msa1454000:intron | 50.0% | |
| CTCTCCAACAAAGGTCTTGG+TGG | + | tig0034984:26153-26172 | None:intergenic | 50.0% | |
| CACCAAGACCTTTGTTGGAG+AGG | - | tig0034984:26151-26170 | Msa1454000:intron | 50.0% | |
| AGCCTCTCCAACAAAGGTCT+TGG | + | tig0034984:26156-26175 | None:intergenic | 50.0% | |
| GTAAAGACGTGCTCGTAGTC+TGG | + | tig0034984:26482-26501 | None:intergenic | 50.0% | |
| TGTCGGTCACGAATGGAGCT+CGG | + | tig0034984:22475-22494 | None:intergenic | 55.0% | |
| AGGTAAAACTCCCCCGACAG+TGG | + | tig0034984:23271-23290 | None:intergenic | 55.0% | |
| GCCATTCCTCGCCTAACAAC+TGG | + | tig0034984:23672-23691 | None:intergenic | 55.0% | |
| CGGCAACTTCAACCCAGCTT+TGG | + | tig0034984:25071-25090 | None:intergenic | 55.0% | |
| ! | GCTGGGTTGAAGTTGCCGTT+AGG | - | tig0034984:25073-25092 | Msa1454000:intron | 55.0% |
| ATAGCAGCGCTACAGCACAG+TGG | - | tig0034984:25254-25273 | Msa1454000:intron | 55.0% | |
| GCACTGCCATCCACAACTAG+AGG | + | tig0034984:25683-25702 | None:intergenic | 55.0% | |
| CGCGAGCTATCAAAAGTCGC+AGG | - | tig0034984:25967-25986 | Msa1454000:intron | 55.0% | |
| TCGGTCACGAATGGAGCTCG+GGG | + | tig0034984:22473-22492 | None:intergenic | 60.0% | |
| GTCGGTCACGAATGGAGCTC+GGG | + | tig0034984:22474-22493 | None:intergenic | 60.0% | |
| GGCCGGACAACCACATCTTC+TGG | - | tig0034984:23861-23880 | Msa1454000:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034984 | gene | 21675 | 27095 | 21675 | ID=Msa1454000;Name=Msa1454000 |
| tig0034984 | mRNA | 21675 | 27095 | 21675 | ID=Msa1454000-mRNA-1;Parent=Msa1454000;Name=Msa1454000-mRNA-1;_AED=0.15;_eAED=0.15;_QI=271|0.61|0.71|0.92|0.92|0.92|14|1441|163 |
| tig0034984 | exon | 21675 | 22305 | 21675 | ID=Msa1454000-mRNA-1:exon:19448;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 22398 | 22482 | 22398 | ID=Msa1454000-mRNA-1:exon:19447;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 22570 | 22625 | 22570 | ID=Msa1454000-mRNA-1:exon:19446;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 22707 | 22883 | 22707 | ID=Msa1454000-mRNA-1:exon:19445;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 22979 | 23098 | 22979 | ID=Msa1454000-mRNA-1:exon:19444;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 23676 | 23774 | 23676 | ID=Msa1454000-mRNA-1:exon:19443;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 24051 | 24171 | 24051 | ID=Msa1454000-mRNA-1:exon:19442;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 24419 | 24628 | 24419 | ID=Msa1454000-mRNA-1:exon:19441;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 24667 | 24674 | 24667 | ID=Msa1454000-mRNA-1:exon:19440;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 24796 | 24940 | 24796 | ID=Msa1454000-mRNA-1:exon:19439;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 25065 | 25090 | 25065 | ID=Msa1454000-mRNA-1:exon:19438;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 25240 | 25245 | 25240 | ID=Msa1454000-mRNA-1:exon:19437;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 25308 | 25389 | 25308 | ID=Msa1454000-mRNA-1:exon:19436;Parent=Msa1454000-mRNA-1 |
| tig0034984 | exon | 26658 | 27095 | 26658 | ID=Msa1454000-mRNA-1:exon:19435;Parent=Msa1454000-mRNA-1 |
| tig0034984 | five_prime_UTR | 26825 | 27095 | 26825 | ID=Msa1454000-mRNA-1:five_prime_utr;Parent=Msa1454000-mRNA-1 |
| tig0034984 | CDS | 26658 | 26824 | 26658 | ID=Msa1454000-mRNA-1:cds;Parent=Msa1454000-mRNA-1 |
| tig0034984 | CDS | 25308 | 25389 | 25308 | ID=Msa1454000-mRNA-1:cds;Parent=Msa1454000-mRNA-1 |
| tig0034984 | CDS | 25240 | 25245 | 25240 | ID=Msa1454000-mRNA-1:cds;Parent=Msa1454000-mRNA-1 |
| tig0034984 | CDS | 25065 | 25090 | 25065 | ID=Msa1454000-mRNA-1:cds;Parent=Msa1454000-mRNA-1 |
| tig0034984 | CDS | 24796 | 24940 | 24796 | ID=Msa1454000-mRNA-1:cds;Parent=Msa1454000-mRNA-1 |
| tig0034984 | CDS | 24667 | 24674 | 24667 | ID=Msa1454000-mRNA-1:cds;Parent=Msa1454000-mRNA-1 |
| tig0034984 | CDS | 24571 | 24628 | 24571 | ID=Msa1454000-mRNA-1:cds;Parent=Msa1454000-mRNA-1 |
| tig0034984 | three_prime_UTR | 24419 | 24570 | 24419 | ID=Msa1454000-mRNA-1:three_prime_utr;Parent=Msa1454000-mRNA-1 |
| tig0034984 | three_prime_UTR | 24051 | 24171 | 24051 | ID=Msa1454000-mRNA-1:three_prime_utr;Parent=Msa1454000-mRNA-1 |
| tig0034984 | three_prime_UTR | 23676 | 23774 | 23676 | ID=Msa1454000-mRNA-1:three_prime_utr;Parent=Msa1454000-mRNA-1 |
| tig0034984 | three_prime_UTR | 22979 | 23098 | 22979 | ID=Msa1454000-mRNA-1:three_prime_utr;Parent=Msa1454000-mRNA-1 |
| tig0034984 | three_prime_UTR | 22707 | 22883 | 22707 | ID=Msa1454000-mRNA-1:three_prime_utr;Parent=Msa1454000-mRNA-1 |
| tig0034984 | three_prime_UTR | 22570 | 22625 | 22570 | ID=Msa1454000-mRNA-1:three_prime_utr;Parent=Msa1454000-mRNA-1 |
| tig0034984 | three_prime_UTR | 22398 | 22482 | 22398 | ID=Msa1454000-mRNA-1:three_prime_utr;Parent=Msa1454000-mRNA-1 |
| tig0034984 | three_prime_UTR | 21675 | 22305 | 21675 | ID=Msa1454000-mRNA-1:three_prime_utr;Parent=Msa1454000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
