Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074570 | XP_003623634.1 | 90.816 | 294 | 16 | 2 | 1 | 283 | 1 | 294 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074570 | sp|K4BIZ9|WRK70_SOLLC | 40.659 | 182 | 92 | 5 | 14 | 189 | 12 | 183 | 3.36e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074570 | G7KY64 | 90.816 | 294 | 16 | 2 | 1 | 283 | 1 | 294 | 0.0 | 547 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1074570 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054240 | Msa1074570 | 0.832736 | 7.972158e-56 | -8.615850e-47 |
| Msa0054310 | Msa1074570 | 0.801658 | 8.114883e-49 | -8.615850e-47 |
| Msa0054330 | Msa1074570 | 0.829469 | 5.059101e-55 | -8.615850e-47 |
| Msa0055710 | Msa1074570 | 0.814537 | 1.464510e-51 | -8.615850e-47 |
| Msa0085290 | Msa1074570 | 0.839820 | 1.260751e-57 | -8.615850e-47 |
| Msa0088550 | Msa1074570 | 0.826404 | 2.764163e-54 | -8.615850e-47 |
| Msa0100070 | Msa1074570 | 0.847586 | 1.053264e-59 | -8.615850e-47 |
| Msa0607180 | Msa1074570 | 0.828971 | 6.682240e-55 | -8.615850e-47 |
| Msa0620790 | Msa1074570 | 0.802728 | 4.887308e-49 | -8.615850e-47 |
| Msa0623080 | Msa1074570 | 0.819119 | 1.372725e-52 | -8.615850e-47 |
| Msa0626280 | Msa1074570 | 0.810777 | 9.739174e-51 | -8.615850e-47 |
| Msa0647360 | Msa1074570 | 0.837499 | 5.014428e-57 | -8.615850e-47 |
| Msa0647830 | Msa1074570 | 0.800571 | 1.353797e-48 | -8.615850e-47 |
| Msa0658570 | Msa1074570 | 0.815002 | 1.155413e-51 | -8.615850e-47 |
| Msa0658990 | Msa1074570 | 0.800874 | 1.174513e-48 | -8.615850e-47 |
| Msa0686850 | Msa1074570 | 0.800947 | 1.134818e-48 | -8.615850e-47 |
| Msa0689010 | Msa1074570 | 0.815298 | 9.930780e-52 | -8.615850e-47 |
| Msa0696740 | Msa1074570 | 0.840493 | 8.413587e-58 | -8.615850e-47 |
| Msa0696770 | Msa1074570 | 0.841011 | 6.152454e-58 | -8.615850e-47 |
| Msa0696800 | Msa1074570 | 0.808201 | 3.479460e-50 | -8.615850e-47 |
| Msa0703490 | Msa1074570 | 0.810844 | 9.417549e-51 | -8.615850e-47 |
| Msa0715720 | Msa1074570 | 0.822235 | 2.640768e-53 | -8.615850e-47 |
| Msa0730270 | Msa1074570 | 0.812848 | 3.447857e-51 | -8.615850e-47 |
| Msa0732840 | Msa1074570 | 0.807316 | 5.364103e-50 | -8.615850e-47 |
| Msa0770580 | Msa1074570 | 0.819537 | 1.102762e-52 | -8.615850e-47 |
| Msa0802470 | Msa1074570 | -0.801866 | 7.356866e-49 | -8.615850e-47 |
| Msa0124110 | Msa1074570 | 0.838462 | 2.834931e-57 | -8.615850e-47 |
| Msa0135360 | Msa1074570 | 0.819574 | 1.081472e-52 | -8.615850e-47 |
| Msa0141230 | Msa1074570 | 0.843997 | 9.931963e-59 | -8.615850e-47 |
| Msa0173990 | Msa1074570 | 0.808369 | 3.204247e-50 | -8.615850e-47 |
| Msa0179860 | Msa1074570 | 0.802459 | 5.554941e-49 | -8.615850e-47 |
| Msa0201330 | Msa1074570 | 0.812407 | 4.305450e-51 | -8.615850e-47 |
| Msa0201370 | Msa1074570 | 0.834361 | 3.134041e-56 | -8.615850e-47 |
| Msa0202750 | Msa1074570 | 0.819199 | 1.316538e-52 | -8.615850e-47 |
| Msa0212310 | Msa1074570 | 0.849564 | 2.981383e-60 | -8.615850e-47 |
| Msa0371570 | Msa1074570 | 0.817963 | 2.510857e-52 | -8.615850e-47 |
| Msa0419990 | Msa1074570 | 0.811581 | 6.518015e-51 | -8.615850e-47 |
| Msa0426110 | Msa1074570 | 0.833752 | 4.451470e-56 | -8.615850e-47 |
| Msa0448550 | Msa1074570 | -0.820783 | 5.715459e-53 | -8.615850e-47 |
| Msa0465930 | Msa1074570 | 0.814652 | 1.381488e-51 | -8.615850e-47 |
| Msa0465970 | Msa1074570 | 0.801905 | 7.222622e-49 | -8.615850e-47 |
| Msa0996130 | Msa1074570 | 0.808477 | 3.038656e-50 | -8.615850e-47 |
| Msa1009000 | Msa1074570 | 0.803606 | 3.217868e-49 | -8.615850e-47 |
| Msa1026500 | Msa1074570 | 0.956043 | 7.458180e-114 | -8.615850e-47 |
| Msa1026510 | Msa1074570 | 0.860673 | 1.753229e-63 | -8.615850e-47 |
| Msa1029090 | Msa1074570 | 0.865137 | 7.341110e-65 | -8.615850e-47 |
| Msa1036390 | Msa1074570 | 0.808515 | 2.981931e-50 | -8.615850e-47 |
| Msa1044090 | Msa1074570 | 0.800222 | 1.594623e-48 | -8.615850e-47 |
| Msa1055430 | Msa1074570 | 0.809092 | 2.244377e-50 | -8.615850e-47 |
| Msa1074570 | Msa1074580 | 0.861088 | 1.311328e-63 | -8.615850e-47 |
| Msa1074570 | Msa1076680 | 0.806172 | 9.360703e-50 | -8.615850e-47 |
| Msa1074570 | Msa1098560 | 0.808285 | 3.337922e-50 | -8.615850e-47 |
| Msa1074570 | Msa1107800 | 0.843616 | 1.255545e-58 | -8.615850e-47 |
| Msa1074570 | Msa1111750 | 0.872758 | 2.487214e-67 | -8.615850e-47 |
| Msa1074570 | Msa1111760 | 0.950324 | 2.084543e-108 | -8.615850e-47 |
| Msa1074570 | Msa1121660 | 0.866998 | 1.891235e-65 | -8.615850e-47 |
| Msa1074570 | Msa1154070 | 0.956935 | 9.080737e-115 | -8.615850e-47 |
| Msa1074570 | Msa1154080 | 0.869639 | 2.663305e-66 | -8.615850e-47 |
| Msa1074570 | Msa1156180 | 0.865628 | 5.146213e-65 | -8.615850e-47 |
| Msa1074570 | Msa1177070 | 0.827862 | 1.237196e-54 | -8.615850e-47 |
| Msa1074570 | Msa1179120 | 0.843978 | 1.004699e-58 | -8.615850e-47 |
| Msa1074570 | Msa1221200 | -0.801129 | 1.041383e-48 | -8.615850e-47 |
| Msa1074570 | Msa1228210 | 0.807837 | 4.159411e-50 | -8.615850e-47 |
| Msa1074570 | Msa1229600 | 0.801159 | 1.026964e-48 | -8.615850e-47 |
| Msa1074570 | Msa1249940 | 0.836619 | 8.415987e-57 | -8.615850e-47 |
| Msa1074570 | Msa1271280 | 0.807808 | 4.217160e-50 | -8.615850e-47 |
| Msa1074570 | Msa1278840 | 0.800919 | 1.149777e-48 | -8.615850e-47 |
| Msa1074570 | Msa1314170 | 0.820058 | 8.380490e-53 | -8.615850e-47 |
| Msa1074570 | Msa1316980 | 0.805322 | 1.411480e-49 | -8.615850e-47 |
| Msa1074570 | Msa1336490 | 0.800457 | 1.428236e-48 | -8.615850e-47 |
| Msa1074570 | Msa1358870 | -0.802695 | 4.964835e-49 | -8.615850e-47 |
| Msa1074570 | Msa1363890 | 0.811584 | 6.506789e-51 | -8.615850e-47 |
| Msa1074570 | Msa1376890 | 0.804145 | 2.485537e-49 | -8.615850e-47 |
| Msa1074570 | Msa1381940 | 0.842229 | 2.937984e-58 | -8.615850e-47 |
| Msa1074570 | Msa1393410 | 0.806493 | 8.010957e-50 | -8.615850e-47 |
| Msa1074570 | Msa1411070 | 0.804543 | 2.053739e-49 | -8.615850e-47 |
| Msa1074570 | Msa1435420 | 0.803896 | 2.801355e-49 | -8.615850e-47 |
| Msa1074570 | Msa1454000 | 0.801875 | 7.324066e-49 | -8.615850e-47 |
| Msa1074570 | Msa1461250 | -0.816009 | 6.897479e-52 | -8.615850e-47 |
| Msa0243910 | Msa1074570 | 0.801944 | 7.089171e-49 | -8.615850e-47 |
| Msa0243930 | Msa1074570 | 0.822181 | 2.717234e-53 | -8.615850e-47 |
| Msa0245880 | Msa1074570 | 0.841467 | 4.667637e-58 | -8.615850e-47 |
| Msa0265820 | Msa1074570 | 0.805365 | 1.382710e-49 | -8.615850e-47 |
| Msa0266000 | Msa1074570 | -0.804744 | 1.864440e-49 | -8.615850e-47 |
| Msa0282590 | Msa1074570 | 0.845168 | 4.804940e-59 | -8.615850e-47 |
| Msa0282600 | Msa1074570 | 0.808572 | 2.899793e-50 | -8.615850e-47 |
| Msa0304990 | Msa1074570 | 0.808626 | 2.823626e-50 | -8.615850e-47 |
| Msa0331920 | Msa1074570 | 0.811575 | 6.535932e-51 | -8.615850e-47 |
| Msa0335040 | Msa1074570 | 0.811105 | 8.266753e-51 | -8.615850e-47 |
| Msa0338110 | Msa1074570 | 0.801791 | 7.621903e-49 | -8.615850e-47 |
| Msa0340450 | Msa1074570 | 0.807641 | 4.576678e-50 | -8.615850e-47 |
| Msa0356890 | Msa1074570 | -0.812273 | 4.605605e-51 | -8.615850e-47 |
| Msa0362740 | Msa1074570 | 0.843078 | 1.747418e-58 | -8.615850e-47 |
| Msa0517330 | Msa1074570 | 0.811596 | 6.468005e-51 | -8.615850e-47 |
| Msa0524890 | Msa1074570 | -0.834584 | 2.753786e-56 | -8.615850e-47 |
| Msa0528970 | Msa1074570 | 0.803018 | 4.258046e-49 | -8.615850e-47 |
| Msa0553460 | Msa1074570 | 0.801876 | 7.321046e-49 | -8.615850e-47 |
| Msa0559250 | Msa1074570 | 0.819423 | 1.170361e-52 | -8.615850e-47 |
| Msa0567020 | Msa1074570 | 0.811240 | 7.728338e-51 | -8.615850e-47 |
| Msa0946680 | Msa1074570 | 0.820193 | 7.807471e-53 | -8.615850e-47 |
| Msa0951720 | Msa1074570 | 0.822661 | 2.102050e-53 | -8.615850e-47 |
| Msa0956390 | Msa1074570 | 0.803943 | 2.738084e-49 | -8.615850e-47 |
| Msa0961490 | Msa1074570 | 0.818674 | 1.732729e-52 | -8.615850e-47 |
| Msa0964130 | Msa1074570 | 0.828822 | 7.258659e-55 | -8.615850e-47 |
| Msa0965520 | Msa1074570 | 0.801808 | 7.561241e-49 | -8.615850e-47 |
| Msa0977180 | Msa1074570 | -0.818584 | 1.815861e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074570 | MtrunA17_Chr7g0244971 | 90.816 | 294 | 16 | 2 | 1 | 283 | 1 | 294 | 0.0 | 547 |
| Msa1074570 | MtrunA17_Chr7g0244981 | 87.368 | 285 | 32 | 4 | 1 | 283 | 1 | 283 | 0.0 | 506 |
| Msa1074570 | MtrunA17_Chr8g0350621 | 40.076 | 262 | 132 | 6 | 13 | 264 | 5 | 251 | 4.09e-60 | 192 |
| Msa1074570 | MtrunA17_Chr8g0334541 | 48.077 | 208 | 94 | 5 | 14 | 220 | 4 | 198 | 2.12e-57 | 185 |
| Msa1074570 | MtrunA17_Chr2g0315371 | 39.683 | 252 | 118 | 8 | 11 | 231 | 12 | 260 | 5.29e-49 | 164 |
| Msa1074570 | MtrunA17_Chr2g0315381 | 40.741 | 243 | 116 | 5 | 17 | 231 | 17 | 259 | 2.04e-44 | 152 |
| Msa1074570 | MtrunA17_Chr2g0315361 | 37.838 | 259 | 123 | 6 | 11 | 233 | 12 | 268 | 6.84e-42 | 146 |
| Msa1074570 | MtrunA17_Chr3g0128671 | 41.530 | 183 | 86 | 6 | 21 | 191 | 23 | 196 | 5.10e-38 | 136 |
| Msa1074570 | MtrunA17_Chr5g0428351 | 38.983 | 236 | 109 | 12 | 5 | 238 | 81 | 283 | 6.18e-38 | 135 |
| Msa1074570 | MtrunA17_Chr8g0350631 | 68.831 | 77 | 23 | 1 | 144 | 220 | 5 | 80 | 2.19e-31 | 114 |
| Msa1074570 | MtrunA17_Chr7g0275531 | 31.980 | 197 | 106 | 4 | 12 | 195 | 9 | 190 | 1.39e-26 | 106 |
| Msa1074570 | MtrunA17_Chr3g0126391 | 33.503 | 197 | 95 | 5 | 15 | 184 | 7 | 194 | 2.46e-26 | 105 |
| Msa1074570 | MtrunA17_Chr8g0347251 | 51.765 | 85 | 33 | 1 | 106 | 182 | 111 | 195 | 3.49e-23 | 97.4 |
| Msa1074570 | MtrunA17_Chr8g0387981 | 31.863 | 204 | 104 | 7 | 1 | 182 | 1 | 191 | 4.84e-21 | 91.7 |
| Msa1074570 | MtrunA17_Chr8g0350641 | 32.353 | 136 | 83 | 4 | 14 | 143 | 7 | 139 | 3.65e-15 | 70.9 |
| Msa1074570 | MtrunA17_Chr2g0315401 | 55.000 | 60 | 26 | 1 | 151 | 209 | 19 | 78 | 1.63e-14 | 69.3 |
| Msa1074570 | MtrunA17_Chr7g0224801 | 51.667 | 60 | 26 | 1 | 122 | 181 | 92 | 148 | 1.84e-14 | 69.7 |
| Msa1074570 | MtrunA17_Chr5g0431811 | 46.875 | 64 | 34 | 0 | 121 | 184 | 670 | 733 | 1.95e-14 | 73.6 |
| Msa1074570 | MtrunA17_Chr8g0383351 | 40.964 | 83 | 39 | 3 | 98 | 180 | 142 | 214 | 2.86e-13 | 67.8 |
| Msa1074570 | MtrunA17_Chr8g0386241 | 35.088 | 114 | 68 | 3 | 76 | 189 | 59 | 166 | 7.05e-13 | 65.9 |
| Msa1074570 | MtrunA17_Chr7g0270831 | 35.345 | 116 | 72 | 2 | 66 | 180 | 158 | 271 | 1.25e-12 | 67.4 |
| Msa1074570 | MtrunA17_Chr3g0129361 | 41.176 | 85 | 37 | 3 | 98 | 181 | 127 | 199 | 4.04e-12 | 64.3 |
| Msa1074570 | MtrunA17_Chr1g0194481 | 46.667 | 60 | 29 | 1 | 122 | 181 | 157 | 213 | 4.15e-12 | 65.5 |
| Msa1074570 | MtrunA17_Chr2g0322391 | 34.579 | 107 | 67 | 2 | 98 | 204 | 325 | 428 | 4.27e-12 | 66.2 |
| Msa1074570 | MtrunA17_Chr5g0418781 | 47.458 | 59 | 28 | 1 | 122 | 180 | 123 | 178 | 5.08e-12 | 64.7 |
| Msa1074570 | MtrunA17_Chr8g0335811 | 33.813 | 139 | 62 | 6 | 73 | 205 | 113 | 227 | 5.39e-12 | 63.9 |
| Msa1074570 | MtrunA17_Chr7g0270191 | 46.667 | 60 | 29 | 1 | 122 | 181 | 144 | 200 | 1.15e-11 | 63.9 |
| Msa1074570 | MtrunA17_Chr3g0099641 | 36.364 | 99 | 60 | 2 | 106 | 204 | 235 | 330 | 1.38e-11 | 64.3 |
| Msa1074570 | MtrunA17_Chr4g0051881 | 47.458 | 59 | 28 | 1 | 122 | 180 | 177 | 232 | 3.37e-11 | 62.8 |
| Msa1074570 | MtrunA17_Chr5g0443131 | 45.763 | 59 | 29 | 1 | 122 | 180 | 156 | 211 | 3.68e-11 | 62.8 |
| Msa1074570 | MtrunA17_Chr2g0315341 | 56.863 | 51 | 21 | 1 | 160 | 209 | 2 | 52 | 4.30e-11 | 59.3 |
| Msa1074570 | MtrunA17_Chr8g0348311 | 39.744 | 78 | 43 | 2 | 106 | 181 | 136 | 211 | 5.38e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074570 | AT3G56400.1 | 41.758 | 182 | 81 | 5 | 14 | 182 | 10 | 179 | 3.75e-37 | 134 |
| Msa1074570 | AT2G40750.1 | 37.500 | 200 | 92 | 8 | 14 | 182 | 14 | 211 | 1.10e-27 | 109 |
| Msa1074570 | AT1G66550.1 | 34.158 | 202 | 112 | 7 | 14 | 212 | 8 | 191 | 1.56e-26 | 104 |
| Msa1074570 | AT2G46400.1 | 34.239 | 184 | 91 | 5 | 15 | 189 | 8 | 170 | 7.46e-26 | 103 |
| Msa1074570 | AT5G01900.1 | 34.392 | 189 | 96 | 5 | 10 | 187 | 3 | 174 | 3.88e-25 | 101 |
| Msa1074570 | AT1G66550.2 | 33.333 | 201 | 110 | 7 | 14 | 212 | 8 | 186 | 5.45e-25 | 100 |
| Msa1074570 | AT5G22570.1 | 32.432 | 185 | 103 | 5 | 14 | 191 | 9 | 178 | 5.66e-24 | 98.6 |
| Msa1074570 | AT4G11070.1 | 31.959 | 194 | 108 | 4 | 12 | 182 | 8 | 200 | 1.10e-22 | 95.5 |
| Msa1074570 | AT1G66560.1 | 33.721 | 172 | 98 | 5 | 15 | 185 | 9 | 165 | 6.56e-22 | 92.4 |
| Msa1074570 | AT1G66600.1 | 33.523 | 176 | 95 | 5 | 14 | 185 | 8 | 165 | 3.57e-21 | 90.1 |
| Msa1074570 | AT5G24110.1 | 33.333 | 180 | 83 | 4 | 16 | 182 | 17 | 172 | 2.13e-20 | 89.4 |
| Msa1074570 | AT2G40740.1 | 30.244 | 205 | 115 | 5 | 16 | 195 | 44 | 245 | 8.22e-20 | 87.4 |
| Msa1074570 | AT2G40740.3 | 30.244 | 205 | 115 | 5 | 16 | 195 | 53 | 254 | 9.69e-20 | 87.4 |
| Msa1074570 | AT4G11070.2 | 32.948 | 173 | 102 | 3 | 12 | 182 | 8 | 168 | 5.45e-19 | 85.1 |
| Msa1074570 | AT1G80590.1 | 36.522 | 115 | 65 | 2 | 124 | 233 | 86 | 197 | 7.01e-18 | 80.9 |
| Msa1074570 | AT4G23810.1 | 45.882 | 85 | 38 | 1 | 106 | 182 | 133 | 217 | 1.96e-17 | 81.3 |
| Msa1074570 | AT1G69310.4 | 37.097 | 124 | 71 | 4 | 69 | 188 | 89 | 209 | 1.95e-14 | 72.4 |
| Msa1074570 | AT1G69310.2 | 37.097 | 124 | 71 | 4 | 69 | 188 | 89 | 209 | 1.95e-14 | 72.4 |
| Msa1074570 | AT1G69310.1 | 37.097 | 124 | 71 | 4 | 69 | 188 | 89 | 209 | 1.95e-14 | 72.4 |
| Msa1074570 | AT5G45260.1 | 52.632 | 57 | 27 | 0 | 124 | 180 | 1209 | 1265 | 3.29e-13 | 70.1 |
| Msa1074570 | AT5G13080.1 | 45.070 | 71 | 36 | 1 | 122 | 192 | 66 | 133 | 1.60e-12 | 64.3 |
| Msa1074570 | AT5G41570.1 | 40.964 | 83 | 44 | 2 | 98 | 180 | 75 | 152 | 1.86e-12 | 64.7 |
| Msa1074570 | AT2G37260.1 | 45.833 | 72 | 35 | 2 | 117 | 188 | 344 | 411 | 2.43e-12 | 67.0 |
| Msa1074570 | AT2G37260.2 | 45.833 | 72 | 35 | 2 | 117 | 188 | 262 | 329 | 3.16e-12 | 66.2 |
| Msa1074570 | AT2G37260.3 | 45.833 | 72 | 35 | 2 | 117 | 188 | 264 | 331 | 3.25e-12 | 66.2 |
| Msa1074570 | AT5G49520.1 | 41.791 | 67 | 36 | 1 | 122 | 188 | 220 | 283 | 5.19e-12 | 65.9 |
| Msa1074570 | AT2G46130.1 | 45.763 | 59 | 29 | 1 | 122 | 180 | 29 | 84 | 5.82e-12 | 61.6 |
| Msa1074570 | AT1G64000.1 | 43.077 | 65 | 34 | 1 | 116 | 180 | 107 | 168 | 7.87e-12 | 63.5 |
| Msa1074570 | AT3G01970.1 | 38.202 | 89 | 44 | 2 | 122 | 210 | 64 | 141 | 1.10e-11 | 62.0 |
| Msa1074570 | AT4G04450.2 | 33.929 | 112 | 71 | 2 | 94 | 204 | 168 | 277 | 1.93e-11 | 64.3 |
| Msa1074570 | AT2G47260.1 | 46.667 | 60 | 29 | 1 | 122 | 181 | 173 | 229 | 2.62e-11 | 63.5 |
| Msa1074570 | AT4G04450.1 | 33.929 | 112 | 71 | 2 | 94 | 204 | 262 | 371 | 2.79e-11 | 63.9 |
| Msa1074570 | AT4G39410.1 | 38.542 | 96 | 44 | 4 | 93 | 188 | 201 | 281 | 2.97e-11 | 63.2 |
| Msa1074570 | AT2G44745.1 | 41.667 | 84 | 42 | 3 | 98 | 180 | 122 | 199 | 3.77e-11 | 62.0 |
| Msa1074570 | AT4G18170.1 | 36.538 | 104 | 54 | 4 | 80 | 180 | 132 | 226 | 4.00e-11 | 63.2 |
| Msa1074570 | AT1G62300.1 | 44.595 | 74 | 38 | 2 | 108 | 180 | 296 | 367 | 5.24e-11 | 63.2 |
| Msa1074570 | AT1G29860.1 | 44.444 | 63 | 32 | 1 | 122 | 184 | 135 | 194 | 6.83e-11 | 62.0 |
Find 74 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATTGATGAATTGTTAAA+AGG | 0.184934 | 7_2:-72486869 | Msa1074570:CDS |
| GGTGATATTGATAACATTAA+TGG | 0.251913 | 7_2:-72486803 | Msa1074570:CDS |
| TCCATTTCTCTCAGTGAAAA+AGG | 0.266907 | 7_2:-72484854 | Msa1074570:CDS |
| TGCTTTGCAGGAACTATTAC+AGG | 0.282092 | 7_2:-72485086 | Msa1074570:intron |
| CTGAGCTCTTGTATTATATA+GGG | 0.299186 | 7_2:+72487022 | None:intergenic |
| CAATATGATGTTGGCTCAAA+TGG | 0.300173 | 7_2:-72484525 | Msa1074570:three_prime_UTR |
| GATATGATTGTAGCTAGATT+TGG | 0.320624 | 7_2:-72484294 | Msa1074570:three_prime_UTR |
| GATTATTGTTCAAGAACAAT+AGG | 0.331883 | 7_2:+72486720 | None:intergenic |
| ACTGAGCTCTTGTATTATAT+AGG | 0.338023 | 7_2:+72487021 | None:intergenic |
| CAAGAGTACTTCCATTGTTA+AGG | 0.344618 | 7_2:-72486636 | Msa1074570:CDS |
| GGCTCAAATGGAACTGGACT+TGG | 0.346215 | 7_2:-72484513 | Msa1074570:three_prime_UTR |
| CTTTACAAAACAACCTACTA+TGG | 0.350539 | 7_2:-72484994 | Msa1074570:CDS |
| TAATTCTCATTCACTTCAAA+TGG | 0.354743 | 7_2:+72484238 | None:intergenic |
| ACATCATCATACATGATATC+AGG | 0.372411 | 7_2:+72484697 | None:intergenic |
| TTTAAAAGATCTTCAGCAAC+TGG | 0.373083 | 7_2:+72486770 | None:intergenic |
| ATAAATATACCTTGGGAAAT+CGG | 0.385972 | 7_2:+72485478 | None:intergenic |
| AATCTTAGGAAGGTAGATAT+TGG | 0.388866 | 7_2:+72486946 | None:intergenic |
| CTCTAAAGAATCCTCAGATT+TGG | 0.392364 | 7_2:+72486667 | None:intergenic |
| TCTAATTAATTTCAAGAAAG+TGG | 0.395509 | 7_2:+72484664 | None:intergenic |
| GGTCATCAATGGAGAAAGTA+TGG | 0.401550 | 7_2:-72485521 | Msa1074570:CDS |
| AACTCAAGCAAAATTGTTGT+TGG | 0.403077 | 7_2:+72484194 | None:intergenic |
| CTTGATTCTCATGATCAGTT+AGG | 0.404590 | 7_2:-72484730 | Msa1074570:CDS |
| GGAGAATCCTCTATGATCTC+AGG | 0.407384 | 7_2:+72484943 | None:intergenic |
| CAGTCTTGTTTGGCTGGTGT+TGG | 0.412342 | 7_2:+72484877 | None:intergenic |
| ATTATTGTTCAAGAACAATA+GGG | 0.414455 | 7_2:+72486721 | None:intergenic |
| CCTTCAAATGATTACCTCTC+TGG | 0.419974 | 7_2:-72484799 | Msa1074570:CDS |
| GATGTTGGCTCAAATGGAAC+TGG | 0.431212 | 7_2:-72484519 | Msa1074570:three_prime_UTR |
| GAGAAATGGACAGTCTTGTT+TGG | 0.445787 | 7_2:+72484867 | None:intergenic |
| AGTCTTGTTTGGCTGGTGTT+GGG | 0.452762 | 7_2:+72484878 | None:intergenic |
| AGGTAATCATTTGAAGGAGG+AGG | 0.457187 | 7_2:+72484805 | None:intergenic |
| TTCAAGAAAGTGGCCAATTG+AGG | 0.469111 | 7_2:+72484674 | None:intergenic |
| CCAGAGAGGTAATCATTTGA+AGG | 0.470477 | 7_2:+72484799 | None:intergenic |
| TGATTGATGAATTGTTAAAA+GGG | 0.474553 | 7_2:-72486868 | Msa1074570:CDS |
| CAGAAAAGTTTCACAAACAT+GGG | 0.477292 | 7_2:-72485573 | Msa1074570:CDS |
| AATGGACAGTCTTGTTTGGC+TGG | 0.477532 | 7_2:+72484871 | None:intergenic |
| AGAAATATTCTGAATGAAAG+TGG | 0.485810 | 7_2:-72486824 | Msa1074570:CDS |
| TCAGAAAAGTTTCACAAACA+TGG | 0.494934 | 7_2:-72485574 | Msa1074570:intron |
| CTAGCTCATGGTAGTGGTCG+TGG | 0.509082 | 7_2:-72486896 | Msa1074570:CDS |
| ACAAGTGTGATGGCCATAGT+AGG | 0.510474 | 7_2:+72484981 | None:intergenic |
| AACAATAATCCTACTTCTGA+GGG | 0.511593 | 7_2:-72486707 | Msa1074570:CDS |
| TCTGATCGTCCCGTGGAAGA+TGG | 0.520055 | 7_2:-72485542 | Msa1074570:CDS |
| GAAAATCTAGCTCATGGTAG+TGG | 0.526481 | 7_2:-72486902 | Msa1074570:CDS |
| CCGTGGAAGATGGTCATCAA+TGG | 0.528577 | 7_2:-72485532 | Msa1074570:CDS |
| AGCTAAGGAACATGGAAGAC+TGG | 0.529377 | 7_2:+72484914 | None:intergenic |
| GTAGAGGCTGTTACAAAAGA+AGG | 0.531049 | 7_2:-72486610 | Msa1074570:intron |
| AGAGAAGACTACACTAAAGA+TGG | 0.538967 | 7_2:-72484457 | Msa1074570:three_prime_UTR |
| GTTGTCAAAGCTAAGGAACA+TGG | 0.540400 | 7_2:+72484906 | None:intergenic |
| TGTATGATGATGTCCTCAAT+TGG | 0.542759 | 7_2:-72484687 | Msa1074570:CDS |
| AAATCAGAGCCCTCAGAAGT+AGG | 0.544337 | 7_2:+72486698 | None:intergenic |
| GAACAATAATCCTACTTCTG+AGG | 0.546015 | 7_2:-72486708 | Msa1074570:CDS |
| GGAAAGAGTTGTCAAAGCTA+AGG | 0.561012 | 7_2:+72484899 | None:intergenic |
| ACTATGTAACAATATGATGT+TGG | 0.562103 | 7_2:-72484534 | Msa1074570:three_prime_UTR |
| TGCACTCACAAACATGATCA+AGG | 0.563442 | 7_2:-72485063 | Msa1074570:CDS |
| GAGAATCCTCTATGATCTCA+GGG | 0.568526 | 7_2:+72484944 | None:intergenic |
| GGACTTGGATTTGAACATTG+TGG | 0.570945 | 7_2:-72484498 | Msa1074570:three_prime_UTR |
| CCATTGATGACCATCTTCCA+CGG | 0.575191 | 7_2:+72485532 | None:intergenic |
| GCAAGATTCTACAAGTGTGA+TGG | 0.576779 | 7_2:+72484971 | None:intergenic |
| TTGGTATTGAAATCTTAGGA+AGG | 0.577815 | 7_2:+72486936 | None:intergenic |
| GCCTCTACGTTCCTTAACAA+TGG | 0.594370 | 7_2:+72486625 | None:intergenic |
| AGTTTCACAAACATGGGAGA+AGG | 0.598123 | 7_2:-72485567 | Msa1074570:CDS |
| ACAAGTGCAACAAATTCAAG+AGG | 0.601952 | 7_2:-72485025 | Msa1074570:CDS |
| AAAGTCGGTCAATATCATCA+TGG | 0.607816 | 7_2:-72484399 | Msa1074570:three_prime_UTR |
| AACATGGAAGACTGGTCACA+AGG | 0.611016 | 7_2:+72484922 | None:intergenic |
| CATTGATGACCATCTTCCAC+GGG | 0.612085 | 7_2:+72485533 | None:intergenic |
| ATATTAGTCATCAACAAAGT+CGG | 0.614924 | 7_2:-72484414 | Msa1074570:three_prime_UTR |
| TTTGCAACTCACCAAATCTG+AGG | 0.616026 | 7_2:-72486678 | Msa1074570:CDS |
| TGAGCTCTTGTATTATATAG+GGG | 0.620923 | 7_2:+72487023 | None:intergenic |
| TCTTGCACACCGATTTCCCA+AGG | 0.624999 | 7_2:-72485487 | Msa1074570:intron |
| GCAAAGCCCTGAGATCATAG+AGG | 0.632964 | 7_2:-72484950 | Msa1074570:CDS |
| GAGAGGTAATCATTTGAAGG+AGG | 0.645608 | 7_2:+72484802 | None:intergenic |
| TCCATTGTTAAGGAACGTAG+AGG | 0.656442 | 7_2:-72486626 | Msa1074570:CDS |
| GAAGGAGTCTGATCGTCCCG+TGG | 0.657169 | 7_2:-72485549 | Msa1074570:CDS |
| GCAAGATGTAGTACAACGAG+AGG | 0.666237 | 7_2:-72484360 | Msa1074570:three_prime_UTR |
| CATCAAAAGTGAGTCCAGAG+AGG | 0.707648 | 7_2:+72484785 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAAAAAATGAGA+GGG | + | chr7_2:72485469-72485488 | None:intergenic | 10.0% |
| !! | GTTATATATATATATATGTA+TGG | - | chr7_2:72486892-72486911 | Msa1074570:CDS | 10.0% |
| !!! | AGATTTTCATTTTTCATTTT+TGG | + | chr7_2:72484316-72484335 | None:intergenic | 15.0% |
| !! | AATGTATTTGGTTAAAAAAT+TGG | - | chr7_2:72485086-72485105 | Msa1074570:intron | 15.0% |
| !! | CAAAATAAATAAAAAATGAG+AGG | + | chr7_2:72485470-72485489 | None:intergenic | 15.0% |
| !! | TTAATTTCTTTACATCTTAA+AGG | - | chr7_2:72485961-72485980 | Msa1074570:intron | 15.0% |
| !!! | ATTTTTGGTATTGAAATCTT+AGG | + | chr7_2:72484301-72484320 | None:intergenic | 20.0% |
| !! | TGATTGATGAATTGTTAAAA+GGG | - | chr7_2:72484362-72484381 | Msa1074570:three_prime_UTR | 20.0% |
| !! | ATTATTGTTCAAGAACAATA+GGG | + | chr7_2:72484512-72484531 | None:intergenic | 20.0% |
| !! | AGTAAAAAAAGTTGAATATG+TGG | + | chr7_2:72484680-72484699 | None:intergenic | 20.0% |
| !! | TATAGAATTATAGATGTGTT+GGG | + | chr7_2:72484774-72484793 | None:intergenic | 20.0% |
| !! | ATATAGAATTATAGATGTGT+TGG | + | chr7_2:72484775-72484794 | None:intergenic | 20.0% |
| !!! | AATTTTAGATGTATGAAAAG+TGG | + | chr7_2:72484798-72484817 | None:intergenic | 20.0% |
| !!! | TTTTCCTTTTTTTTCTTCTT+CGG | - | chr7_2:72484868-72484887 | Msa1074570:CDS | 20.0% |
| !!! | TTATTTGAACTTTTAAGATG+AGG | - | chr7_2:72484964-72484983 | Msa1074570:CDS | 20.0% |
| !! | ATTGTTCTTATAAATAGGAT+CGG | + | chr7_2:72485049-72485068 | None:intergenic | 20.0% |
| !! | CCAAAATTGTTCTTATAAAT+AGG | + | chr7_2:72485054-72485073 | None:intergenic | 20.0% |
| !!! | CCTATTTATAAGAACAATTT+TGG | - | chr7_2:72485051-72485070 | Msa1074570:CDS | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | - | chr7_2:72485074-72485093 | Msa1074570:CDS | 20.0% |
| !! | CCTATTTATAAGAGAAATTT+GGG | + | chr7_2:72485136-72485155 | None:intergenic | 20.0% |
| !! | TCCTATTTATAAGAGAAATT+TGG | + | chr7_2:72485137-72485156 | None:intergenic | 20.0% |
| !! | ATATTACTCATATGTTGTAA+AGG | + | chr7_2:72485187-72485206 | None:intergenic | 20.0% |
| !! | TTACAACATATGAGTAATAT+TGG | - | chr7_2:72485187-72485206 | Msa1074570:intron | 20.0% |
| !! | TACAACATATGAGTAATATT+GGG | - | chr7_2:72485188-72485207 | Msa1074570:intron | 20.0% |
| !!! | TTTTGATGAGAGAAAATTAT+TGG | + | chr7_2:72485277-72485296 | None:intergenic | 20.0% |
| !! | ATGATGAACAATAATTGATA+GGG | + | chr7_2:72485396-72485415 | None:intergenic | 20.0% |
| !!! | TTGTTGTGTTTTTTTTTTTG+TGG | - | chr7_2:72485487-72485506 | Msa1074570:intron | 20.0% |
| !! | TGAAAAAGAATTGCATAATT+GGG | + | chr7_2:72485639-72485658 | None:intergenic | 20.0% |
| !! | GACAATCTTAAAAGTAAAAT+GGG | + | chr7_2:72485799-72485818 | None:intergenic | 20.0% |
| !! | TGACAATCTTAAAAGTAAAA+TGG | + | chr7_2:72485800-72485819 | None:intergenic | 20.0% |
| !! | TTCAAATAGTGAAATTTGAT+TGG | + | chr7_2:72485829-72485848 | None:intergenic | 20.0% |
| !!! | TAAAATGTTAAATGAGTTGA+AGG | - | chr7_2:72486008-72486027 | Msa1074570:intron | 20.0% |
| !! | TATTAAGAAAGAAGAATTAG+AGG | + | chr7_2:72486086-72486105 | None:intergenic | 20.0% |
| !! | TCTAATTAATTTCAAGAAAG+TGG | + | chr7_2:72486569-72486588 | None:intergenic | 20.0% |
| !! | AAAAATGAAAATCTAGCTCA+TGG | - | chr7_2:72484322-72484341 | Msa1074570:three_prime_UTR | 25.0% |
| ! | GTGATTGATGAATTGTTAAA+AGG | - | chr7_2:72484361-72484380 | Msa1074570:three_prime_UTR | 25.0% |
| ! | AGAAATATTCTGAATGAAAG+TGG | - | chr7_2:72484406-72484425 | Msa1074570:three_prime_UTR | 25.0% |
| !! | GGTGATATTGATAACATTAA+TGG | - | chr7_2:72484427-72484446 | Msa1074570:three_prime_UTR | 25.0% |
| ! | GATTATTGTTCAAGAACAAT+AGG | + | chr7_2:72484513-72484532 | None:intergenic | 25.0% |
| ! | GAAAAACCATAGGTTAAAAT+AGG | + | chr7_2:72484728-72484747 | None:intergenic | 25.0% |
| !! | TTTTTCATACACACTATTCA+TGG | - | chr7_2:72484742-72484761 | Msa1074570:CDS | 25.0% |
| ! | CCCAAATTTCTCTTATAAAT+AGG | - | chr7_2:72485133-72485152 | Msa1074570:intron | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | - | chr7_2:72485138-72485157 | Msa1074570:intron | 25.0% |
| ! | ACAACATATGAGTAATATTG+GGG | - | chr7_2:72485189-72485208 | Msa1074570:intron | 25.0% |
| !! | ATGAGAGAAAATTATTGGTT+AGG | + | chr7_2:72485272-72485291 | None:intergenic | 25.0% |
| ! | GATGATGAACAATAATTGAT+AGG | + | chr7_2:72485397-72485416 | None:intergenic | 25.0% |
| !! | TTTCATAGTCTTACATTGAT+TGG | - | chr7_2:72485579-72485598 | Msa1074570:intron | 25.0% |
| !!! | GATTGGTTTTGAGTTTTTTT+TGG | - | chr7_2:72485596-72485615 | Msa1074570:intron | 25.0% |
| ! | CTGAAAAAGAATTGCATAAT+TGG | + | chr7_2:72485640-72485659 | None:intergenic | 25.0% |
| ! | ATAAATATACCTTGGGAAAT+CGG | + | chr7_2:72485755-72485774 | None:intergenic | 25.0% |
| ! | AACTCGTATAAATATACCTT+GGG | + | chr7_2:72485762-72485781 | None:intergenic | 25.0% |
| ! | AAACTCGTATAAATATACCT+TGG | + | chr7_2:72485763-72485782 | None:intergenic | 25.0% |
| ! | ATAGTGAAATTTGATTGGAT+TGG | + | chr7_2:72485824-72485843 | None:intergenic | 25.0% |
| ! | TGAATATTTATATGCTTTGC+AGG | - | chr7_2:72486132-72486151 | Msa1074570:intron | 25.0% |
| ! | ACTATGTAACAATATGATGT+TGG | - | chr7_2:72486696-72486715 | Msa1074570:CDS | 25.0% |
| ! | ATATTAGTCATCAACAAAGT+CGG | - | chr7_2:72486816-72486835 | Msa1074570:CDS | 25.0% |
| ! | TAATTCTCATTCACTTCAAA+TGG | + | chr7_2:72486995-72487014 | None:intergenic | 25.0% |
| TGAGCTCTTGTATTATATAG+GGG | + | chr7_2:72484210-72484229 | None:intergenic | 30.0% | |
| CTGAGCTCTTGTATTATATA+GGG | + | chr7_2:72484211-72484230 | None:intergenic | 30.0% | |
| ACTGAGCTCTTGTATTATAT+AGG | + | chr7_2:72484212-72484231 | None:intergenic | 30.0% | |
| AATCTTAGGAAGGTAGATAT+TGG | + | chr7_2:72484287-72484306 | None:intergenic | 30.0% | |
| ! | TTGGTATTGAAATCTTAGGA+AGG | + | chr7_2:72484297-72484316 | None:intergenic | 30.0% |
| TTTAAAAGATCTTCAGCAAC+TGG | + | chr7_2:72484463-72484482 | None:intergenic | 30.0% | |
| ! | AGTTGCTGAAGATCTTTTAA+AGG | - | chr7_2:72484462-72484481 | Msa1074570:three_prime_UTR | 30.0% |
| AACAATAATCCTACTTCTGA+GGG | - | chr7_2:72484523-72484542 | Msa1074570:three_prime_UTR | 30.0% | |
| !!! | AGTTGACCTATTTTAACCTA+TGG | - | chr7_2:72484719-72484738 | Msa1074570:CDS | 30.0% |
| TAGTGTGTATGAAAAACCAT+AGG | + | chr7_2:72484738-72484757 | None:intergenic | 30.0% | |
| CTTTCCGAAGAAGAAAAAAA+AGG | + | chr7_2:72484875-72484894 | None:intergenic | 30.0% | |
| TTCTTATAAATAGGATCGGT+GGG | + | chr7_2:72485045-72485064 | None:intergenic | 30.0% | |
| !! | GTGACTTTAGTGTATTTTAG+AGG | + | chr7_2:72485335-72485354 | None:intergenic | 30.0% |
| ATTGATAGGGTCCAATATTA+GGG | + | chr7_2:72485383-72485402 | None:intergenic | 30.0% | |
| AATTGATAGGGTCCAATATT+AGG | + | chr7_2:72485384-72485403 | None:intergenic | 30.0% | |
| ! | GTTGTTTCCTCTAGTTATTA+TGG | - | chr7_2:72485525-72485544 | Msa1074570:CDS | 30.0% |
| ! | TCCTCTAGTTATTATGGTTT+TGG | - | chr7_2:72485531-72485550 | Msa1074570:CDS | 30.0% |
| TCAGAAAAGTTTCACAAACA+TGG | - | chr7_2:72485656-72485675 | Msa1074570:intron | 30.0% | |
| CAGAAAAGTTTCACAAACAT+GGG | - | chr7_2:72485657-72485676 | Msa1074570:intron | 30.0% | |
| !! | TAGTAGGTTGTTTTGTAAAG+AGG | + | chr7_2:72486236-72486255 | None:intergenic | 30.0% |
| CTTTACAAAACAACCTACTA+TGG | - | chr7_2:72486236-72486255 | Msa1074570:intron | 30.0% | |
| ACATCATCATACATGATATC+AGG | + | chr7_2:72486536-72486555 | None:intergenic | 30.0% | |
| ACACGCAAAAACTTAAACAA+AGG | + | chr7_2:72486622-72486641 | None:intergenic | 30.0% | |
| GATATGATTGTAGCTAGATT+TGG | - | chr7_2:72486936-72486955 | Msa1074570:five_prime_UTR | 30.0% | |
| GAACAATAATCCTACTTCTG+AGG | - | chr7_2:72484522-72484541 | Msa1074570:three_prime_UTR | 35.0% | |
| ! | CTCTAAAGAATCCTCAGATT+TGG | + | chr7_2:72484566-72484585 | None:intergenic | 35.0% |
| !! | CAAGAGTACTTCCATTGTTA+AGG | - | chr7_2:72484594-72484613 | Msa1074570:three_prime_UTR | 35.0% |
| GTTCTTATAAATAGGATCGG+TGG | + | chr7_2:72485046-72485065 | None:intergenic | 35.0% | |
| ACATATGAGTAATATTGGGG+TGG | - | chr7_2:72485192-72485211 | Msa1074570:intron | 35.0% | |
| CATATGAGTAATATTGGGGT+GGG | - | chr7_2:72485193-72485212 | Msa1074570:intron | 35.0% | |
| ATATGAGTAATATTGGGGTG+GGG | - | chr7_2:72485194-72485213 | Msa1074570:intron | 35.0% | |
| TATCCACTACATGTGATGAA+AGG | - | chr7_2:72485427-72485446 | Msa1074570:intron | 35.0% | |
| GCCAAAACCATAATAACTAG+AGG | + | chr7_2:72485535-72485554 | None:intergenic | 35.0% | |
| ACAAGTGCAACAAATTCAAG+AGG | - | chr7_2:72486205-72486224 | Msa1074570:intron | 35.0% | |
| !! | TAGGTTGTTTTGTAAAGAGG+TGG | + | chr7_2:72486233-72486252 | None:intergenic | 35.0% |
| TCCATTTCTCTCAGTGAAAA+AGG | - | chr7_2:72486376-72486395 | Msa1074570:intron | 35.0% | |
| !! | TCCTTTTTCACTGAGAGAAA+TGG | + | chr7_2:72486380-72486399 | None:intergenic | 35.0% |
| ATTTCTCTCAGTGAAAAAGG+AGG | - | chr7_2:72486379-72486398 | Msa1074570:intron | 35.0% | |
| !! | CACTTTTGATGATCCAGAAA+AGG | - | chr7_2:72486457-72486476 | Msa1074570:intron | 35.0% |
| CTTGATTCTCATGATCAGTT+AGG | - | chr7_2:72486500-72486519 | Msa1074570:intron | 35.0% | |
| ! | TGTATGATGATGTCCTCAAT+TGG | - | chr7_2:72486543-72486562 | Msa1074570:intron | 35.0% |
| !! | CAATATGATGTTGGCTCAAA+TGG | - | chr7_2:72486705-72486724 | Msa1074570:CDS | 35.0% |
| AGAGAAGACTACACTAAAGA+TGG | - | chr7_2:72486773-72486792 | Msa1074570:CDS | 35.0% | |
| AAAGTCGGTCAATATCATCA+TGG | - | chr7_2:72486831-72486850 | Msa1074570:CDS | 35.0% | |
| ! | GAAAATCTAGCTCATGGTAG+TGG | - | chr7_2:72484328-72484347 | Msa1074570:three_prime_UTR | 40.0% |
| TTTGCAACTCACCAAATCTG+AGG | - | chr7_2:72484552-72484571 | Msa1074570:three_prime_UTR | 40.0% | |
| TCCATTGTTAAGGAACGTAG+AGG | - | chr7_2:72484604-72484623 | Msa1074570:three_prime_UTR | 40.0% | |
| GTAGAGGCTGTTACAAAAGA+AGG | - | chr7_2:72484620-72484639 | Msa1074570:three_prime_UTR | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr7_2:72485141-72485160 | Msa1074570:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr7_2:72485142-72485161 | Msa1074570:intron | 40.0% | |
| CCAATAATAAGTACTCCCTC+CGG | + | chr7_2:72485160-72485179 | None:intergenic | 40.0% | |
| !! | ATAGAGACAAAAGCACCGAA+AGG | + | chr7_2:72485243-72485262 | None:intergenic | 40.0% |
| ! | GGCTTTAGTGACTTTGTGTT+GGG | + | chr7_2:72485357-72485376 | None:intergenic | 40.0% |
| ATAGGGTCCAATATTAGGGT+GGG | + | chr7_2:72485379-72485398 | None:intergenic | 40.0% | |
| AGTCCTTTCATCACATGTAG+TGG | + | chr7_2:72485433-72485452 | None:intergenic | 40.0% | |
| AGTTTCACAAACATGGGAGA+AGG | - | chr7_2:72485663-72485682 | Msa1074570:intron | 40.0% | |
| GGTCATCAATGGAGAAAGTA+TGG | - | chr7_2:72485709-72485728 | Msa1074570:intron | 40.0% | |
| ! | GGAGAAAGTATGGCCAAAAA+AGG | - | chr7_2:72485719-72485738 | Msa1074570:intron | 40.0% |
| TGCTTTGCAGGAACTATTAC+AGG | - | chr7_2:72486144-72486163 | Msa1074570:intron | 40.0% | |
| TGCACTCACAAACATGATCA+AGG | - | chr7_2:72486167-72486186 | Msa1074570:intron | 40.0% | |
| GCAAGATTCTACAAGTGTGA+TGG | + | chr7_2:72486262-72486281 | None:intergenic | 40.0% | |
| GAGAATCCTCTATGATCTCA+GGG | + | chr7_2:72486289-72486308 | None:intergenic | 40.0% | |
| GTTGTCAAAGCTAAGGAACA+TGG | + | chr7_2:72486327-72486346 | None:intergenic | 40.0% | |
| GGAAAGAGTTGTCAAAGCTA+AGG | + | chr7_2:72486334-72486353 | None:intergenic | 40.0% | |
| !! | GAGAAATGGACAGTCTTGTT+TGG | + | chr7_2:72486366-72486385 | None:intergenic | 40.0% |
| AGTGAAAAAGGAGGATTGCA+AGG | - | chr7_2:72486388-72486407 | Msa1074570:intron | 40.0% | |
| AGGTAATCATTTGAAGGAGG+AGG | + | chr7_2:72486428-72486447 | None:intergenic | 40.0% | |
| GAGAGGTAATCATTTGAAGG+AGG | + | chr7_2:72486431-72486450 | None:intergenic | 40.0% | |
| CCAGAGAGGTAATCATTTGA+AGG | + | chr7_2:72486434-72486453 | None:intergenic | 40.0% | |
| CCTTCAAATGATTACCTCTC+TGG | - | chr7_2:72486431-72486450 | Msa1074570:intron | 40.0% | |
| ! | GATAGTGTGACATCCTTTTC+TGG | + | chr7_2:72486473-72486492 | None:intergenic | 40.0% |
| TTCAAGAAAGTGGCCAATTG+AGG | + | chr7_2:72486559-72486578 | None:intergenic | 40.0% | |
| GGACTTGGATTTGAACATTG+TGG | - | chr7_2:72486732-72486751 | Msa1074570:CDS | 40.0% | |
| AAATCAGAGCCCTCAGAAGT+AGG | + | chr7_2:72484535-72484554 | None:intergenic | 45.0% | |
| GCCTCTACGTTCCTTAACAA+TGG | + | chr7_2:72484608-72484627 | None:intergenic | 45.0% | |
| !! | CCGGAGGGAGTACTTATTAT+TGG | - | chr7_2:72485157-72485176 | Msa1074570:intron | 45.0% |
| ! | GGGCTTTAGTGACTTTGTGT+TGG | + | chr7_2:72485358-72485377 | None:intergenic | 45.0% |
| CTAAAGCCCCACCCTAATAT+TGG | - | chr7_2:72485369-72485388 | Msa1074570:intron | 45.0% | |
| TAGGGTCCAATATTAGGGTG+GGG | + | chr7_2:72485378-72485397 | None:intergenic | 45.0% | |
| GATAGGGTCCAATATTAGGG+TGG | + | chr7_2:72485380-72485399 | None:intergenic | 45.0% | |
| ! | CATTGATGACCATCTTCCAC+GGG | + | chr7_2:72485700-72485719 | None:intergenic | 45.0% |
| ! | CCATTGATGACCATCTTCCA+CGG | + | chr7_2:72485701-72485720 | None:intergenic | 45.0% |
| !!! | CGGTGTGCAAGATCCTTTTT+TGG | + | chr7_2:72485735-72485754 | None:intergenic | 45.0% |
| ACAAGTGTGATGGCCATAGT+AGG | + | chr7_2:72486252-72486271 | None:intergenic | 45.0% | |
| GGAGAATCCTCTATGATCTC+AGG | + | chr7_2:72486290-72486309 | None:intergenic | 45.0% | |
| ! | AACATGGAAGACTGGTCACA+AGG | + | chr7_2:72486311-72486330 | None:intergenic | 45.0% |
| AGCTAAGGAACATGGAAGAC+TGG | + | chr7_2:72486319-72486338 | None:intergenic | 45.0% | |
| !! | AGTCTTGTTTGGCTGGTGTT+GGG | + | chr7_2:72486355-72486374 | None:intergenic | 45.0% |
| !! | AATGGACAGTCTTGTTTGGC+TGG | + | chr7_2:72486362-72486381 | None:intergenic | 45.0% |
| CATCAAAAGTGAGTCCAGAG+AGG | + | chr7_2:72486448-72486467 | None:intergenic | 45.0% | |
| !! | GATGTTGGCTCAAATGGAAC+TGG | - | chr7_2:72486711-72486730 | Msa1074570:CDS | 45.0% |
| GCAAGATGTAGTACAACGAG+AGG | - | chr7_2:72486870-72486889 | Msa1074570:CDS | 45.0% | |
| !! | ACTTTGGCTTCGGTGCCTTT+CGG | - | chr7_2:72485225-72485244 | Msa1074570:intron | 50.0% |
| CCGTGGAAGATGGTCATCAA+TGG | - | chr7_2:72485698-72485717 | Msa1074570:intron | 50.0% | |
| !! | TCTTGCACACCGATTTCCCA+AGG | - | chr7_2:72485743-72485762 | Msa1074570:intron | 50.0% |
| GCAAAGCCCTGAGATCATAG+AGG | - | chr7_2:72486280-72486299 | Msa1074570:intron | 50.0% | |
| !! | CAGTCTTGTTTGGCTGGTGT+TGG | + | chr7_2:72486356-72486375 | None:intergenic | 50.0% |
| GGCTCAAATGGAACTGGACT+TGG | - | chr7_2:72486717-72486736 | Msa1074570:CDS | 50.0% | |
| !! | CTAGCTCATGGTAGTGGTCG+TGG | - | chr7_2:72484334-72484353 | Msa1074570:three_prime_UTR | 55.0% |
| ! | GGCTTCCGTGACTTTGGCTT+CGG | - | chr7_2:72485215-72485234 | Msa1074570:intron | 55.0% |
| !! | AGGCACCGAAGCCAAAGTCA+CGG | + | chr7_2:72485223-72485242 | None:intergenic | 55.0% |
| TCTGATCGTCCCGTGGAAGA+TGG | - | chr7_2:72485688-72485707 | Msa1074570:intron | 55.0% | |
| GAAGGAGTCTGATCGTCCCG+TGG | - | chr7_2:72485681-72485700 | Msa1074570:intron | 60.0% | |
| GGGTGGGGCTTCCGTGACTT+TGG | - | chr7_2:72485209-72485228 | Msa1074570:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 72484198 | 72487054 | 72484198 | ID=Msa1074570;Name=Msa1074570 |
| chr7_2 | mRNA | 72484198 | 72487054 | 72484198 | ID=Msa1074570-mRNA-1;Parent=Msa1074570;Name=Msa1074570-mRNA-1;_AED=0.25;_eAED=0.25;_QI=121|1|1|1|1|1|3|477|283 |
| chr7_2 | exon | 72484198 | 72485098 | 72484198 | ID=Msa1074570-mRNA-1:exon:16756;Parent=Msa1074570-mRNA-1 |
| chr7_2 | exon | 72485488 | 72485592 | 72485488 | ID=Msa1074570-mRNA-1:exon:16755;Parent=Msa1074570-mRNA-1 |
| chr7_2 | exon | 72486611 | 72487054 | 72486611 | ID=Msa1074570-mRNA-1:exon:16754;Parent=Msa1074570-mRNA-1 |
| chr7_2 | five_prime_UTR | 72486934 | 72487054 | 72486934 | ID=Msa1074570-mRNA-1:five_prime_utr;Parent=Msa1074570-mRNA-1 |
| chr7_2 | CDS | 72486611 | 72486933 | 72486611 | ID=Msa1074570-mRNA-1:cds;Parent=Msa1074570-mRNA-1 |
| chr7_2 | CDS | 72485488 | 72485592 | 72485488 | ID=Msa1074570-mRNA-1:cds;Parent=Msa1074570-mRNA-1 |
| chr7_2 | CDS | 72484675 | 72485098 | 72484675 | ID=Msa1074570-mRNA-1:cds;Parent=Msa1074570-mRNA-1 |
| chr7_2 | three_prime_UTR | 72484198 | 72484674 | 72484198 | ID=Msa1074570-mRNA-1:three_prime_utr;Parent=Msa1074570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
