Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044090 | XP_013463390.2 | 93.918 | 559 | 32 | 2 | 16 | 573 | 27 | 584 | 0.0 | 1075 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044090 | A0A396J5U6 | 93.918 | 559 | 32 | 2 | 16 | 573 | 27 | 584 | 0.0 | 1075 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012520 | Msa1044090 | 0.826565 | 2.529695e-54 | -8.615850e-47 |
| Msa0035110 | Msa1044090 | 0.809794 | 1.586876e-50 | -8.615850e-47 |
| Msa0041000 | Msa1044090 | 0.802141 | 6.459236e-49 | -8.615850e-47 |
| Msa0046820 | Msa1044090 | 0.803125 | 4.046271e-49 | -8.615850e-47 |
| Msa0088550 | Msa1044090 | 0.832413 | 9.586811e-56 | -8.615850e-47 |
| Msa0626470 | Msa1044090 | 0.811432 | 7.021106e-51 | -8.615850e-47 |
| Msa0629890 | Msa1044090 | 0.813450 | 2.544447e-51 | -8.615850e-47 |
| Msa0653020 | Msa1044090 | 0.809530 | 1.808275e-50 | -8.615850e-47 |
| Msa0658570 | Msa1044090 | 0.802547 | 5.326663e-49 | -8.615850e-47 |
| Msa0664160 | Msa1044090 | 0.830740 | 2.477680e-55 | -8.615850e-47 |
| Msa0695410 | Msa1044090 | 0.816857 | 4.453867e-52 | -8.615850e-47 |
| Msa0701840 | Msa1044090 | -0.807323 | 5.346804e-50 | -8.615850e-47 |
| Msa0703490 | Msa1044090 | 0.830985 | 2.157598e-55 | -8.615850e-47 |
| Msa0718240 | Msa1044090 | 0.810926 | 9.038518e-51 | -8.615850e-47 |
| Msa0719490 | Msa1044090 | -0.809539 | 1.799917e-50 | -8.615850e-47 |
| Msa0722930 | Msa1044090 | 0.814516 | 1.480390e-51 | -8.615850e-47 |
| Msa0723140 | Msa1044090 | 0.803078 | 4.138327e-49 | -8.615850e-47 |
| Msa0733200 | Msa1044090 | 0.842195 | 2.998360e-58 | -8.615850e-47 |
| Msa0736060 | Msa1044090 | 0.811946 | 5.428117e-51 | -8.615850e-47 |
| Msa0773610 | Msa1044090 | 0.810608 | 1.059163e-50 | -8.615850e-47 |
| Msa0774240 | Msa1044090 | 0.824964 | 6.067036e-54 | -8.615850e-47 |
| Msa0776030 | Msa1044090 | 0.802676 | 5.010764e-49 | -8.615850e-47 |
| Msa0811000 | Msa1044090 | 0.807881 | 4.069405e-50 | -8.615850e-47 |
| Msa0811790 | Msa1044090 | 0.811130 | 8.163571e-51 | -8.615850e-47 |
| Msa0124110 | Msa1044090 | 0.803706 | 3.067506e-49 | -8.615850e-47 |
| Msa0135360 | Msa1044090 | 0.827775 | 1.298279e-54 | -8.615850e-47 |
| Msa0142240 | Msa1044090 | 0.814283 | 1.667374e-51 | -8.615850e-47 |
| Msa0152420 | Msa1044090 | 0.826317 | 2.898657e-54 | -8.615850e-47 |
| Msa0165430 | Msa1044090 | 0.824403 | 8.224466e-54 | -8.615850e-47 |
| Msa0175920 | Msa1044090 | 0.802908 | 4.487606e-49 | -8.615850e-47 |
| Msa0179860 | Msa1044090 | 0.800004 | 1.765906e-48 | -8.615850e-47 |
| Msa0180300 | Msa1044090 | 0.816644 | 4.972278e-52 | -8.615850e-47 |
| Msa0192120 | Msa1044090 | -0.802637 | 5.105189e-49 | -8.615850e-47 |
| Msa0201330 | Msa1044090 | 0.941650 | 2.872283e-101 | -8.615850e-47 |
| Msa0201370 | Msa1044090 | 0.933885 | 9.479132e-96 | -8.615850e-47 |
| Msa0201390 | Msa1044090 | 0.831569 | 1.549625e-55 | -8.615850e-47 |
| Msa0208390 | Msa1044090 | 0.821005 | 5.080086e-53 | -8.615850e-47 |
| Msa0405250 | Msa1044090 | -0.802657 | 5.055037e-49 | -8.615850e-47 |
| Msa0416800 | Msa1044090 | 0.820444 | 6.835959e-53 | -8.615850e-47 |
| Msa0431710 | Msa1044090 | 0.806489 | 8.024376e-50 | -8.615850e-47 |
| Msa0457370 | Msa1044090 | 0.828076 | 1.098991e-54 | -8.615850e-47 |
| Msa0463460 | Msa1044090 | 0.839199 | 1.827277e-57 | -8.615850e-47 |
| Msa0996130 | Msa1044090 | 0.807626 | 4.609909e-50 | -8.615850e-47 |
| Msa1000020 | Msa1044090 | 0.803736 | 3.024056e-49 | -8.615850e-47 |
| Msa1008340 | Msa1044090 | 0.858541 | 7.677450e-63 | -8.615850e-47 |
| Msa1009020 | Msa1044090 | 0.807561 | 4.760624e-50 | -8.615850e-47 |
| Msa1026500 | Msa1044090 | 0.806141 | 9.502637e-50 | -8.615850e-47 |
| Msa1029090 | Msa1044090 | 0.818012 | 2.447837e-52 | -8.615850e-47 |
| Msa1036390 | Msa1044090 | 0.806580 | 7.678714e-50 | -8.615850e-47 |
| Msa1044090 | Msa1049950 | 0.824335 | 8.533428e-54 | -8.615850e-47 |
| Msa1044090 | Msa1074570 | 0.800222 | 1.594623e-48 | -8.615850e-47 |
| Msa1044090 | Msa1083410 | 0.829176 | 5.960007e-55 | -8.615850e-47 |
| Msa1044090 | Msa1100170 | 0.811732 | 6.043414e-51 | -8.615850e-47 |
| Msa1044090 | Msa1111760 | 0.819984 | 8.717222e-53 | -8.615850e-47 |
| Msa1044090 | Msa1122660 | 0.806663 | 7.374007e-50 | -8.615850e-47 |
| Msa1044090 | Msa1125080 | 0.800398 | 1.468220e-48 | -8.615850e-47 |
| Msa1044090 | Msa1128160 | 0.812264 | 4.628177e-51 | -8.615850e-47 |
| Msa1044090 | Msa1139240 | 0.859555 | 3.813467e-63 | -8.615850e-47 |
| Msa1044090 | Msa1154070 | 0.821554 | 3.796514e-53 | -8.615850e-47 |
| Msa1044090 | Msa1156180 | 0.827067 | 1.920038e-54 | -8.615850e-47 |
| Msa1044090 | Msa1165360 | 0.811818 | 5.787142e-51 | -8.615850e-47 |
| Msa1044090 | Msa1167220 | 0.813722 | 2.216447e-51 | -8.615850e-47 |
| Msa1044090 | Msa1170040 | -0.809943 | 1.473856e-50 | -8.615850e-47 |
| Msa1044090 | Msa1179120 | 0.807376 | 5.209648e-50 | -8.615850e-47 |
| Msa1044090 | Msa1217900 | -0.800542 | 1.372570e-48 | -8.615850e-47 |
| Msa1044090 | Msa1267200 | 0.812002 | 5.277289e-51 | -8.615850e-47 |
| Msa1044090 | Msa1271280 | 0.801904 | 7.225995e-49 | -8.615850e-47 |
| Msa1044090 | Msa1271290 | 0.805757 | 1.144415e-49 | -8.615850e-47 |
| Msa1044090 | Msa1279870 | 0.803710 | 3.061877e-49 | -8.615850e-47 |
| Msa1044090 | Msa1335770 | 0.830363 | 3.063634e-55 | -8.615850e-47 |
| Msa1044090 | Msa1454000 | 0.809091 | 2.245364e-50 | -8.615850e-47 |
| Msa0243910 | Msa1044090 | 0.943691 | 7.616225e-103 | -8.615850e-47 |
| Msa0243930 | Msa1044090 | 0.940422 | 2.399302e-100 | -8.615850e-47 |
| Msa0243940 | Msa1044090 | 0.856240 | 3.677496e-62 | -8.615850e-47 |
| Msa0245880 | Msa1044090 | 0.814719 | 1.334911e-51 | -8.615850e-47 |
| Msa0256270 | Msa1044090 | 0.809054 | 2.286548e-50 | -8.615850e-47 |
| Msa0275670 | Msa1044090 | 0.802131 | 6.489088e-49 | -8.615850e-47 |
| Msa0282590 | Msa1044090 | 0.928847 | 1.616864e-92 | -8.615850e-47 |
| Msa0282600 | Msa1044090 | 0.832679 | 8.239105e-56 | -8.615850e-47 |
| Msa0304740 | Msa1044090 | 0.822087 | 2.857290e-53 | -8.615850e-47 |
| Msa0304990 | Msa1044090 | 0.800681 | 1.285741e-48 | -8.615850e-47 |
| Msa0312690 | Msa1044090 | -0.802622 | 5.141972e-49 | -8.615850e-47 |
| Msa0331590 | Msa1044090 | 0.826844 | 2.170037e-54 | -8.615850e-47 |
| Msa0331920 | Msa1044090 | 0.802228 | 6.198581e-49 | -8.615850e-47 |
| Msa0362740 | Msa1044090 | 0.807302 | 5.400454e-50 | -8.615850e-47 |
| Msa0493850 | Msa1044090 | 0.810889 | 9.206425e-51 | -8.615850e-47 |
| Msa0509020 | Msa1044090 | 0.833428 | 5.362524e-56 | -8.615850e-47 |
| Msa0533290 | Msa1044090 | 0.800341 | 1.508490e-48 | -8.615850e-47 |
| Msa0557680 | Msa1044090 | 0.845430 | 4.081947e-59 | -8.615850e-47 |
| Msa0562650 | Msa1044090 | 0.806406 | 8.353452e-50 | -8.615850e-47 |
| Msa0567020 | Msa1044090 | 0.807129 | 5.877429e-50 | -8.615850e-47 |
| Msa0586430 | Msa1044090 | 0.826864 | 2.146821e-54 | -8.615850e-47 |
| Msa0862020 | Msa1044090 | 0.801769 | 7.700943e-49 | -8.615850e-47 |
| Msa0886660 | Msa1044090 | 0.804897 | 1.732516e-49 | -8.615850e-47 |
| Msa0902980 | Msa1044090 | 0.811499 | 6.789070e-51 | -8.615850e-47 |
| Msa0921630 | Msa1044090 | 0.818395 | 2.004772e-52 | -8.615850e-47 |
| Msa0946120 | Msa1044090 | 0.824054 | 9.936292e-54 | -8.615850e-47 |
| Msa0946680 | Msa1044090 | 0.826432 | 2.721963e-54 | -8.615850e-47 |
| Msa0951720 | Msa1044090 | 0.809388 | 1.939328e-50 | -8.615850e-47 |
| Msa0968320 | Msa1044090 | -0.807898 | 4.036524e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044090 | MtrunA17_Chr2g0297701 | 93.918 | 559 | 32 | 2 | 16 | 573 | 27 | 584 | 0.0 | 1075 |
| Msa1044090 | MtrunA17_Chr2g0297691 | 52.641 | 568 | 256 | 6 | 16 | 572 | 140 | 705 | 0.0 | 597 |
| Msa1044090 | MtrunA17_Chr2g0297681 | 51.056 | 568 | 265 | 6 | 16 | 572 | 138 | 703 | 0.0 | 581 |
| Msa1044090 | MtrunA17_Chr2g0297651 | 49.912 | 567 | 272 | 5 | 16 | 572 | 140 | 704 | 0.0 | 564 |
| Msa1044090 | MtrunA17_Chr2g0297711 | 48.845 | 563 | 235 | 5 | 12 | 572 | 29 | 540 | 0.0 | 529 |
| Msa1044090 | MtrunA17_Chr2g0297481 | 50.813 | 492 | 227 | 6 | 89 | 572 | 1 | 485 | 1.96e-170 | 492 |
| Msa1044090 | MtrunA17_Chr2g0297491 | 53.553 | 394 | 172 | 5 | 187 | 572 | 1 | 391 | 9.97e-138 | 405 |
| Msa1044090 | MtrunA17_Chr5g0410171 | 32.143 | 616 | 319 | 16 | 36 | 560 | 126 | 733 | 6.65e-86 | 282 |
| Msa1044090 | MtrunA17_Chr5g0443001 | 32.988 | 579 | 325 | 13 | 35 | 559 | 33 | 602 | 9.76e-81 | 265 |
| Msa1044090 | MtrunA17_Chr5g0410341 | 29.577 | 639 | 336 | 17 | 30 | 562 | 117 | 747 | 3.38e-76 | 256 |
| Msa1044090 | MtrunA17_Chr5g0410201 | 40.120 | 334 | 187 | 5 | 233 | 560 | 1 | 327 | 2.47e-74 | 239 |
| Msa1044090 | MtrunA17_Chr5g0410271 | 39.394 | 330 | 187 | 5 | 238 | 561 | 5 | 327 | 1.44e-71 | 232 |
| Msa1044090 | MtrunA17_Chr6g0456141 | 37.427 | 342 | 186 | 5 | 237 | 557 | 46 | 380 | 3.24e-65 | 218 |
| Msa1044090 | MtrunA17_Chr5g0410371 | 40.753 | 292 | 170 | 2 | 271 | 559 | 4 | 295 | 1.68e-63 | 210 |
| Msa1044090 | MtrunA17_Chr6g0457101 | 29.362 | 596 | 352 | 18 | 36 | 573 | 115 | 699 | 2.14e-63 | 221 |
| Msa1044090 | MtrunA17_Chr5g0410461 | 41.356 | 295 | 165 | 3 | 271 | 559 | 171 | 463 | 8.37e-62 | 211 |
| Msa1044090 | MtrunA17_Chr3g0100741 | 29.189 | 555 | 335 | 13 | 34 | 540 | 34 | 578 | 1.61e-61 | 213 |
| Msa1044090 | MtrunA17_Chr3g0096941 | 29.422 | 554 | 336 | 13 | 34 | 540 | 34 | 579 | 1.71e-59 | 208 |
| Msa1044090 | MtrunA17_Chr6g0456101 | 40.864 | 301 | 175 | 3 | 271 | 571 | 453 | 750 | 3.29e-59 | 210 |
| Msa1044090 | MtrunA17_Chr1g0211541 | 28.731 | 536 | 348 | 9 | 39 | 566 | 2 | 511 | 3.06e-55 | 195 |
| Msa1044090 | MtrunA17_Chr2g0297631 | 44.550 | 211 | 109 | 2 | 2 | 212 | 141 | 343 | 3.81e-55 | 200 |
| Msa1044090 | MtrunA17_Chr5g0410581 | 36.455 | 299 | 185 | 3 | 263 | 556 | 494 | 792 | 4.02e-52 | 191 |
| Msa1044090 | MtrunA17_Chr3g0100301 | 45.813 | 203 | 109 | 1 | 354 | 555 | 205 | 407 | 8.70e-52 | 182 |
| Msa1044090 | MtrunA17_Chr2g0286601 | 33.548 | 310 | 200 | 3 | 247 | 554 | 370 | 675 | 2.92e-48 | 178 |
| Msa1044090 | MtrunA17_Chr2g0286601 | 29.891 | 184 | 117 | 4 | 40 | 213 | 13 | 194 | 1.88e-14 | 76.6 |
| Msa1044090 | MtrunA17_Chr3g0098481 | 35.052 | 291 | 182 | 4 | 271 | 555 | 39 | 328 | 1.03e-47 | 170 |
| Msa1044090 | MtrunA17_Chr1g0211531 | 27.586 | 522 | 342 | 12 | 32 | 542 | 21 | 517 | 2.22e-46 | 171 |
| Msa1044090 | MtrunA17_Chr5g0410191 | 42.857 | 189 | 107 | 1 | 369 | 557 | 2 | 189 | 4.01e-45 | 158 |
| Msa1044090 | MtrunA17_Chr2g0286551 | 33.651 | 315 | 196 | 5 | 254 | 566 | 357 | 660 | 1.13e-43 | 165 |
| Msa1044090 | MtrunA17_Chr2g0286551 | 30.601 | 183 | 117 | 3 | 40 | 213 | 13 | 194 | 6.45e-16 | 81.3 |
| Msa1044090 | MtrunA17_Chr3g0102001 | 35.135 | 296 | 182 | 3 | 269 | 557 | 442 | 734 | 4.78e-43 | 164 |
| Msa1044090 | MtrunA17_Chr5g0439061 | 36.082 | 291 | 181 | 3 | 269 | 555 | 438 | 727 | 3.03e-41 | 159 |
| Msa1044090 | MtrunA17_Chr2g0284501 | 34.333 | 300 | 187 | 5 | 253 | 551 | 357 | 647 | 3.28e-39 | 152 |
| Msa1044090 | MtrunA17_Chr2g0297531 | 37.563 | 197 | 116 | 3 | 95 | 285 | 7 | 202 | 4.70e-39 | 142 |
| Msa1044090 | MtrunA17_Chr3g0098531 | 31.183 | 279 | 186 | 4 | 282 | 555 | 3 | 280 | 1.41e-38 | 143 |
| Msa1044090 | MtrunA17_Chr5g0410451 | 45.098 | 153 | 84 | 0 | 364 | 516 | 36 | 188 | 1.85e-37 | 139 |
| Msa1044090 | MtrunA17_Chr5g0410541 | 46.622 | 148 | 78 | 1 | 369 | 516 | 23 | 169 | 4.35e-36 | 134 |
| Msa1044090 | MtrunA17_Chr2g0284541 | 34.859 | 284 | 176 | 5 | 269 | 551 | 354 | 629 | 2.66e-35 | 140 |
| Msa1044090 | MtrunA17_Chr2g0286561 | 36.224 | 196 | 125 | 0 | 359 | 554 | 5 | 200 | 1.47e-34 | 130 |
| Msa1044090 | MtrunA17_Chr3g0098301 | 29.180 | 305 | 207 | 5 | 258 | 554 | 90 | 393 | 3.63e-32 | 128 |
| Msa1044090 | MtrunA17_Chr5g0439081 | 33.171 | 205 | 128 | 3 | 369 | 572 | 15 | 211 | 1.15e-28 | 113 |
| Msa1044090 | MtrunA17_Chr5g0439051 | 40.526 | 190 | 111 | 2 | 369 | 557 | 19 | 207 | 1.30e-28 | 113 |
| Msa1044090 | MtrunA17_Chr5g0410511 | 34.759 | 187 | 115 | 3 | 369 | 548 | 2 | 188 | 1.99e-28 | 112 |
| Msa1044090 | MtrunA17_Chr2g0297611 | 54.945 | 91 | 40 | 1 | 375 | 465 | 1 | 90 | 3.51e-28 | 108 |
| Msa1044090 | MtrunA17_Chr2g0297521 | 61.628 | 86 | 32 | 1 | 361 | 446 | 1 | 85 | 4.48e-28 | 107 |
| Msa1044090 | MtrunA17_Chr2g0297621 | 40.984 | 122 | 69 | 2 | 233 | 351 | 1 | 122 | 1.01e-23 | 96.7 |
| Msa1044090 | MtrunA17_Chr5g0410181 | 40.299 | 134 | 71 | 3 | 428 | 557 | 2 | 130 | 1.04e-22 | 94.4 |
| Msa1044090 | MtrunA17_Chr1g0211511 | 31.132 | 212 | 138 | 3 | 271 | 479 | 20 | 226 | 1.56e-21 | 96.3 |
| Msa1044090 | MtrunA17_Chr2g0297501 | 37.634 | 93 | 58 | 0 | 89 | 181 | 1 | 93 | 4.58e-20 | 85.5 |
| Msa1044090 | MtrunA17_Chr3g0100921 | 33.333 | 132 | 88 | 0 | 417 | 548 | 1 | 132 | 6.72e-15 | 72.0 |
| Msa1044090 | MtrunA17_Chr3g0100941 | 39.252 | 107 | 65 | 0 | 34 | 140 | 34 | 140 | 1.07e-13 | 70.1 |
| Msa1044090 | MtrunA17_Chr2g0286571 | 29.891 | 184 | 117 | 4 | 40 | 213 | 13 | 194 | 1.28e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044090 | AT3G18670.1 | 32.479 | 585 | 371 | 9 | 2 | 573 | 24 | 597 | 2.66e-96 | 306 |
| Msa1044090 | AT3G18670.2 | 30.818 | 636 | 369 | 10 | 2 | 573 | 24 | 652 | 1.76e-92 | 297 |
| Msa1044090 | AT5G35810.1 | 44.478 | 335 | 180 | 3 | 241 | 569 | 8 | 342 | 1.63e-86 | 272 |
| Msa1044090 | AT5G04700.1 | 32.601 | 546 | 316 | 10 | 65 | 559 | 112 | 656 | 2.35e-71 | 242 |
| Msa1044090 | AT5G04690.1 | 31.034 | 551 | 344 | 11 | 32 | 559 | 75 | 612 | 1.70e-67 | 231 |
| Msa1044090 | AT5G04690.2 | 29.585 | 578 | 351 | 12 | 32 | 559 | 75 | 646 | 1.00e-63 | 221 |
| Msa1044090 | AT5G04690.3 | 29.391 | 575 | 342 | 12 | 32 | 559 | 75 | 632 | 1.95e-63 | 220 |
| Msa1044090 | AT5G04680.2 | 31.660 | 518 | 297 | 10 | 98 | 559 | 12 | 528 | 1.06e-61 | 213 |
| Msa1044090 | AT5G04680.4 | 31.047 | 554 | 322 | 11 | 65 | 559 | 99 | 651 | 3.22e-61 | 214 |
| Msa1044090 | AT5G04730.1 | 29.350 | 569 | 343 | 13 | 57 | 569 | 34 | 599 | 1.90e-60 | 211 |
| Msa1044090 | AT5G04680.3 | 30.727 | 550 | 315 | 10 | 65 | 559 | 99 | 637 | 3.56e-59 | 208 |
| Msa1044090 | AT3G54065.1 | 45.887 | 231 | 119 | 1 | 349 | 573 | 2 | 232 | 1.40e-55 | 187 |
| Msa1044090 | AT5G04680.1 | 35.447 | 347 | 204 | 6 | 224 | 559 | 343 | 680 | 6.98e-51 | 186 |
| Msa1044090 | AT5G35830.1 | 37.297 | 185 | 111 | 3 | 34 | 216 | 89 | 270 | 3.62e-28 | 114 |
| Msa1044090 | AT3G54070.1 | 36.269 | 193 | 115 | 4 | 36 | 221 | 54 | 245 | 1.07e-25 | 106 |
| Msa1044090 | AT5G02620.4 | 23.529 | 510 | 296 | 20 | 69 | 537 | 19 | 475 | 8.14e-11 | 65.1 |
| Msa1044090 | AT5G02620.1 | 23.529 | 510 | 296 | 20 | 69 | 537 | 19 | 475 | 8.14e-11 | 65.1 |
| Msa1044090 | AT5G02620.3 | 23.529 | 510 | 296 | 20 | 69 | 537 | 19 | 475 | 8.14e-11 | 65.1 |
Find 107 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATAAACTCGGGACTTTA+TGG | 0.155576 | 7_2:+2297526 | Msa1044090:CDS |
| TCAATTTGATACATGAAATA+AGG | 0.181057 | 7_2:+2298270 | Msa1044090:CDS |
| ATGAATTGTTGCCATCAATT+AGG | 0.186457 | 7_2:+2297377 | Msa1044090:CDS |
| TCGAGTATTTCTTTACATTT+AGG | 0.190510 | 7_2:-2297472 | None:intergenic |
| CATTAACATTACCATGAAAT+AGG | 0.220099 | 7_2:-2299229 | None:intergenic |
| GCTGGTTTATCTAAATAATT+AGG | 0.228180 | 7_2:-2298748 | None:intergenic |
| GCTTTGAAAGATTGCATAAA+TGG | 0.257637 | 7_2:+2298293 | Msa1044090:CDS |
| CTGAGTTCCCATAACAAATT+AGG | 0.270857 | 7_2:-2298191 | None:intergenic |
| TGAATTGTTGCCATCAATTA+GGG | 0.271979 | 7_2:+2297378 | Msa1044090:CDS |
| CATATTATCATGGTTTGAAA+TGG | 0.303488 | 7_2:+2298974 | Msa1044090:CDS |
| ACATTTGTAGTTCTTTATTT+AGG | 0.305317 | 7_2:+2299091 | Msa1044090:CDS |
| CACTTATCCTAATTTGTTAT+GGG | 0.313348 | 7_2:+2298184 | Msa1044090:CDS |
| GCACTTATCCTAATTTGTTA+TGG | 0.313386 | 7_2:+2298183 | Msa1044090:CDS |
| GCAAGAACAGAAATAAAATT+AGG | 0.316156 | 7_2:-2299000 | None:intergenic |
| GATTTGCTCCCGCTGCAATA+TGG | 0.321893 | 7_2:-2297216 | None:intergenic |
| CTTCACAAAGCAGCACTAAA+AGG | 0.335945 | 7_2:+2297109 | Msa1044090:CDS |
| TGTTCACTTTGTCGAGGAAT+TGG | 0.345157 | 7_2:+2297240 | Msa1044090:CDS |
| CCATCATCTCTGAGTCATCT+AGG | 0.345769 | 7_2:-2298082 | None:intergenic |
| CAATTTGATACATGAAATAA+GGG | 0.346894 | 7_2:+2298271 | Msa1044090:CDS |
| CACGCAGAATTGCTTCAAAA+AGG | 0.357566 | 7_2:+2298607 | Msa1044090:CDS |
| ACTAATGCACCGTGATCATT+TGG | 0.358694 | 7_2:+2297267 | Msa1044090:CDS |
| GAAGGGGAACACATTGGTTT+AGG | 0.361388 | 7_2:-2297090 | None:intergenic |
| TGTTCAACTTGCTGAGATAT+TGG | 0.369153 | 7_2:+2297345 | Msa1044090:CDS |
| AAGGCATTGCGCCTATTTCA+TGG | 0.394651 | 7_2:+2299218 | Msa1044090:three_prime_UTR |
| GTTTGTGGTTGTCAAAGTCT+TGG | 0.400481 | 7_2:+2297796 | Msa1044090:CDS |
| TGAGACGGGTTTACATCTAT+TGG | 0.400693 | 7_2:+2297759 | Msa1044090:CDS |
| GGTTGCCCAGCCATTTGTTA+TGG | 0.404362 | 7_2:-2297188 | None:intergenic |
| CCTTGTCCACCCCTAATTGA+TGG | 0.405706 | 7_2:-2297388 | None:intergenic |
| TTTGTGGTTGTCAAAGTCTT+GGG | 0.416618 | 7_2:+2297797 | Msa1044090:CDS |
| GCTCGAAAACATTCGGTTTG+TGG | 0.422912 | 7_2:+2297781 | Msa1044090:CDS |
| ACAATTATCGCTGCAGAAGT+TGG | 0.426353 | 7_2:+2298131 | Msa1044090:CDS |
| CACAAATAACGCCACTAGTC+CGG | 0.427785 | 7_2:-2298905 | None:intergenic |
| AAATGATGCTCGAATTATCA+TGG | 0.437423 | 7_2:+2298408 | Msa1044090:CDS |
| AGGTGTTACTCCTCTTTACT+TGG | 0.437846 | 7_2:+2297408 | Msa1044090:CDS |
| ATATTATCATGGTTTGAAAT+GGG | 0.443778 | 7_2:+2298975 | Msa1044090:CDS |
| CTCTGCAATGAAATTGATTG+AGG | 0.445736 | 7_2:-2297050 | None:intergenic |
| TTAAGCTTATACGACACATC+TGG | 0.452772 | 7_2:+2298045 | Msa1044090:CDS |
| CTAAAAGGTGATTGGAAAGA+AGG | 0.452948 | 7_2:+2297124 | Msa1044090:CDS |
| TCTATTGGCTCGAAAACATT+CGG | 0.454999 | 7_2:+2297774 | Msa1044090:CDS |
| TTCTACATAACATATTATCA+TGG | 0.459801 | 7_2:+2298964 | Msa1044090:CDS |
| AAGCAGCACTAAAAGGTGAT+TGG | 0.463773 | 7_2:+2297116 | Msa1044090:CDS |
| TTGCCTTTGAAGTTGATATC+CGG | 0.466565 | 7_2:+2298886 | Msa1044090:CDS |
| GTTTCGACTCTCATAGCTAC+AGG | 0.467654 | 7_2:+2298670 | Msa1044090:CDS |
| CTGATTTCTGCCATAACAAA+TGG | 0.468918 | 7_2:+2297178 | Msa1044090:CDS |
| CCTAGATGACTCAGAGATGA+TGG | 0.470237 | 7_2:+2298082 | Msa1044090:CDS |
| GAGACTATATTGAGCCGATC+AGG | 0.472006 | 7_2:-2298371 | None:intergenic |
| GCAAACAGCGAATTCTTGTA+TGG | 0.482111 | 7_2:+2298645 | Msa1044090:CDS |
| AAATCAGCAATGTTGGATCT+TGG | 0.484030 | 7_2:-2297162 | None:intergenic |
| TCTGCAATGAAATTGATTGA+GGG | 0.490761 | 7_2:-2297049 | None:intergenic |
| CAATGTTAGCACCGCCTGAT+CGG | 0.494071 | 7_2:+2298357 | Msa1044090:CDS |
| TCAGCTGCATTTAGCTTACC+AGG | 0.494468 | 7_2:+2298700 | Msa1044090:CDS |
| GCTCCGCATATCGCGAGATA+AGG | 0.498008 | 7_2:-2298846 | None:intergenic |
| TTTCTGCCATAACAAATGGC+TGG | 0.499899 | 7_2:+2297182 | Msa1044090:CDS |
| AAAGCAAATACGAGGAATGC+TGG | 0.502490 | 7_2:-2298766 | None:intergenic |
| ACCGCACTCCATATTGCAGC+GGG | 0.502589 | 7_2:+2297208 | Msa1044090:CDS |
| ATGGCAGAAATCAGCAATGT+TGG | 0.503043 | 7_2:-2297169 | None:intergenic |
| GCTCGAATTATCATGGTTTG+AGG | 0.512843 | 7_2:+2298415 | Msa1044090:CDS |
| AAATAAAGAACTACAAATGT+AGG | 0.513663 | 7_2:-2299088 | None:intergenic |
| TTTGGAATTGCAAGATTGCT+CGG | 0.517151 | 7_2:+2297285 | Msa1044090:CDS |
| CTCAATCAATTTCATTGCAG+AGG | 0.521162 | 7_2:+2297051 | Msa1044090:CDS |
| TTCTGCCATAACAAATGGCT+GGG | 0.532460 | 7_2:+2297183 | Msa1044090:CDS |
| TTGGAATTGCAAGATTGCTC+GGG | 0.533926 | 7_2:+2297286 | Msa1044090:CDS |
| ATTTGCTTTATCCGACTCCA+TGG | 0.541197 | 7_2:+2298780 | Msa1044090:CDS |
| GTGTTATCATTGTTTCCACC+TGG | 0.542558 | 7_2:-2298718 | None:intergenic |
| TGTAAAACAGCCAAGTAAAG+AGG | 0.542761 | 7_2:-2297418 | None:intergenic |
| TTTAGTGCTGCTTTGTGAAG+GGG | 0.544540 | 7_2:-2297106 | None:intergenic |
| CTTTGTGAAGGGGAACACAT+TGG | 0.546773 | 7_2:-2297096 | None:intergenic |
| TGATCGGCTCAATATAGTCT+CGG | 0.546856 | 7_2:+2298373 | Msa1044090:CDS |
| CATCATCTCTGAGTCATCTA+GGG | 0.550587 | 7_2:-2298081 | None:intergenic |
| CCATCAATTAGGGGTGGACA+AGG | 0.554840 | 7_2:+2297388 | Msa1044090:CDS |
| GATCGGCTCAATATAGTCTC+GGG | 0.558296 | 7_2:+2298374 | Msa1044090:CDS |
| ATTTGAACTTACATAAATGC+AGG | 0.558916 | 7_2:-2297834 | None:intergenic |
| GTTCCTCACTTGTATAAACT+CGG | 0.560727 | 7_2:+2297516 | Msa1044090:CDS |
| GCGATAATTGTTACTTGAGA+CGG | 0.561513 | 7_2:-2298119 | None:intergenic |
| AAATACTCGAGGAAAACGAT+TGG | 0.569851 | 7_2:+2297485 | Msa1044090:CDS |
| TAGCGAATCATACGTTTACT+CGG | 0.572760 | 7_2:-2299114 | None:intergenic |
| CGAGATAAGTGCCATGGAGT+CGG | 0.585094 | 7_2:-2298791 | None:intergenic |
| CGCATATCGCGAGATAAGGA+TGG | 0.586729 | 7_2:-2298842 | None:intergenic |
| CATCCTTATCTCGCGATATG+CGG | 0.590914 | 7_2:+2298843 | Msa1044090:CDS |
| GTTATGGGAACTCAGTAACA+AGG | 0.591126 | 7_2:+2298199 | Msa1044090:CDS |
| AAGCAAACAGTGAGATGGCA+TGG | 0.593244 | 7_2:+2297440 | Msa1044090:CDS |
| GAAGTTGATATCCGGACTAG+TGG | 0.593266 | 7_2:+2298894 | Msa1044090:CDS |
| AGACATATAAACAACGGTAT+CGG | 0.594156 | 7_2:-2299030 | None:intergenic |
| TGTCGTATAAGCTTAAGCAT+TGG | 0.594683 | 7_2:-2298038 | None:intergenic |
| CGGAGGTGATAGCAATGAGA+CGG | 0.603335 | 7_2:+2297744 | Msa1044090:CDS |
| AGTCCGGATATCAACTTCAA+AGG | 0.603725 | 7_2:-2298889 | None:intergenic |
| TAAGCTTATACGACACATCT+GGG | 0.604184 | 7_2:+2298046 | Msa1044090:CDS |
| GGAGGTGATAGCAATGAGAC+GGG | 0.612349 | 7_2:+2297745 | Msa1044090:CDS |
| TCAAATTGAAGATACTAGCA+TGG | 0.613242 | 7_2:-2298256 | None:intergenic |
| TGAAGACGAGATAAGTGCCA+TGG | 0.615834 | 7_2:-2298797 | None:intergenic |
| TTTACAAGCAAACAGTGAGA+TGG | 0.616121 | 7_2:+2297435 | Msa1044090:CDS |
| TTGTTGCCATCAATTAGGGG+TGG | 0.620541 | 7_2:+2297382 | Msa1044090:CDS |
| AACCGCACTCCATATTGCAG+CGG | 0.625156 | 7_2:+2297207 | Msa1044090:CDS |
| AAATCATGTTCACTTTGTCG+AGG | 0.626112 | 7_2:+2297234 | Msa1044090:CDS |
| ACTATATTGAGCCGATCAGG+CGG | 0.628275 | 7_2:-2298368 | None:intergenic |
| TTCCTCACTTGTATAAACTC+GGG | 0.633269 | 7_2:+2297517 | Msa1044090:CDS |
| CTTGCAATTCCAAATGATCA+CGG | 0.637982 | 7_2:-2297276 | None:intergenic |
| GTCCCGAGTTTATACAAGTG+AGG | 0.646956 | 7_2:-2297519 | None:intergenic |
| TTATGGGAACTCAGTAACAA+GGG | 0.656955 | 7_2:+2298200 | Msa1044090:CDS |
| GAATTGTTGCCATCAATTAG+GGG | 0.658510 | 7_2:+2297379 | Msa1044090:CDS |
| AACTGTAGACATATAAACAA+CGG | 0.659566 | 7_2:-2299036 | None:intergenic |
| TCTTTCGTAAATAGTTCGCG+AGG | 0.683898 | 7_2:-2298583 | None:intergenic |
| GCTGCATTTAGCTTACCAGG+TGG | 0.684232 | 7_2:+2298703 | Msa1044090:CDS |
| TAAATGTAAAGAAATACTCG+AGG | 0.687289 | 7_2:+2297474 | Msa1044090:CDS |
| TCCCGCTGCAATATGGAGTG+CGG | 0.708642 | 7_2:-2297209 | None:intergenic |
| AGTCGGATAAAGCAAATACG+AGG | 0.727881 | 7_2:-2298774 | None:intergenic |
| AATTGAAGATACTAGCATGG+CGG | 0.757307 | 7_2:-2298253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATCAAACATAATT+TGG | + | chr7_2:2297658-2297677 | Msa1044090:intron | 10.0% |
| !! | AAATATTATCAAACATAATT+TGG | + | chr7_2:2297658-2297677 | Msa1044090:intron | 10.0% |
| !! | GTAATATTAATTAAACATTC+AGG | + | chr7_2:2298002-2298021 | Msa1044090:intron | 15.0% |
| !!! | TCTAATTGTTTTTAAATCTA+AGG | + | chr7_2:2299199-2299218 | Msa1044090:three_prime_UTR | 15.0% |
| !! | GTAATATTAATTAAACATTC+AGG | + | chr7_2:2298002-2298021 | Msa1044090:intron | 15.0% |
| !!! | TCTAATTGTTTTTAAATCTA+AGG | + | chr7_2:2299199-2299218 | Msa1044090:three_prime_UTR | 15.0% |
| !! | CAAACATAATTTGGATATTA+TGG | + | chr7_2:2297667-2297686 | Msa1044090:intron | 20.0% |
| !! | TCAATTTGATACATGAAATA+AGG | + | chr7_2:2298270-2298289 | Msa1044090:CDS | 20.0% |
| !! | CAATTTGATACATGAAATAA+GGG | + | chr7_2:2298271-2298290 | Msa1044090:CDS | 20.0% |
| !!! | TTTTTCATTTCAATCATATG+TGG | - | chr7_2:2298547-2298566 | None:intergenic | 20.0% |
| !! | ATTGAAATGAAAAATTCTGA+AGG | + | chr7_2:2298553-2298572 | Msa1044090:CDS | 20.0% |
| !! | TTCTACATAACATATTATCA+TGG | + | chr7_2:2298964-2298983 | Msa1044090:CDS | 20.0% |
| !!! | ATATTATCATGGTTTGAAAT+GGG | + | chr7_2:2298975-2298994 | Msa1044090:CDS | 20.0% |
| !! | AAATAAAGAACTACAAATGT+AGG | - | chr7_2:2299091-2299110 | None:intergenic | 20.0% |
| !!! | ACATTTGTAGTTCTTTATTT+AGG | + | chr7_2:2299091-2299110 | Msa1044090:CDS | 20.0% |
| !! | CAAACATAATTTGGATATTA+TGG | + | chr7_2:2297667-2297686 | Msa1044090:intron | 20.0% |
| !! | TCAATTTGATACATGAAATA+AGG | + | chr7_2:2298270-2298289 | Msa1044090:CDS | 20.0% |
| !! | CAATTTGATACATGAAATAA+GGG | + | chr7_2:2298271-2298290 | Msa1044090:CDS | 20.0% |
| !!! | TTTTTCATTTCAATCATATG+TGG | - | chr7_2:2298547-2298566 | None:intergenic | 20.0% |
| !! | ATTGAAATGAAAAATTCTGA+AGG | + | chr7_2:2298553-2298572 | Msa1044090:CDS | 20.0% |
| !! | TTCTACATAACATATTATCA+TGG | + | chr7_2:2298964-2298983 | Msa1044090:CDS | 20.0% |
| !!! | ATATTATCATGGTTTGAAAT+GGG | + | chr7_2:2298975-2298994 | Msa1044090:CDS | 20.0% |
| !! | AAATAAAGAACTACAAATGT+AGG | - | chr7_2:2299091-2299110 | None:intergenic | 20.0% |
| !!! | ACATTTGTAGTTCTTTATTT+AGG | + | chr7_2:2299091-2299110 | Msa1044090:CDS | 20.0% |
| ! | TCGAGTATTTCTTTACATTT+AGG | - | chr7_2:2297475-2297494 | None:intergenic | 25.0% |
| ! | TAAATGTAAAGAAATACTCG+AGG | + | chr7_2:2297474-2297493 | Msa1044090:CDS | 25.0% |
| ! | ATTTGAACTTACATAAATGC+AGG | - | chr7_2:2297837-2297856 | None:intergenic | 25.0% |
| !!! | CACTTATCCTAATTTGTTAT+GGG | + | chr7_2:2298184-2298203 | Msa1044090:CDS | 25.0% |
| !! | GCTGGTTTATCTAAATAATT+AGG | - | chr7_2:2298751-2298770 | None:intergenic | 25.0% |
| ! | CATATTATCATGGTTTGAAA+TGG | + | chr7_2:2298974-2298993 | Msa1044090:CDS | 25.0% |
| ! | GCAAGAACAGAAATAAAATT+AGG | - | chr7_2:2299003-2299022 | None:intergenic | 25.0% |
| ! | AACTGTAGACATATAAACAA+CGG | - | chr7_2:2299039-2299058 | None:intergenic | 25.0% |
| ! | CATTAACATTACCATGAAAT+AGG | - | chr7_2:2299232-2299251 | None:intergenic | 25.0% |
| ! | TCGAGTATTTCTTTACATTT+AGG | - | chr7_2:2297475-2297494 | None:intergenic | 25.0% |
| ! | TAAATGTAAAGAAATACTCG+AGG | + | chr7_2:2297474-2297493 | Msa1044090:CDS | 25.0% |
| ! | ATTTGAACTTACATAAATGC+AGG | - | chr7_2:2297837-2297856 | None:intergenic | 25.0% |
| !!! | CACTTATCCTAATTTGTTAT+GGG | + | chr7_2:2298184-2298203 | Msa1044090:CDS | 25.0% |
| !! | GCTGGTTTATCTAAATAATT+AGG | - | chr7_2:2298751-2298770 | None:intergenic | 25.0% |
| ! | CATATTATCATGGTTTGAAA+TGG | + | chr7_2:2298974-2298993 | Msa1044090:CDS | 25.0% |
| ! | GCAAGAACAGAAATAAAATT+AGG | - | chr7_2:2299003-2299022 | None:intergenic | 25.0% |
| ! | AACTGTAGACATATAAACAA+CGG | - | chr7_2:2299039-2299058 | None:intergenic | 25.0% |
| ! | CATTAACATTACCATGAAAT+AGG | - | chr7_2:2299232-2299251 | None:intergenic | 25.0% |
| TCTGCAATGAAATTGATTGA+GGG | - | chr7_2:2297052-2297071 | None:intergenic | 30.0% | |
| TTGCAGAGGAACATAAAAAA+AGG | + | chr7_2:2297065-2297084 | Msa1044090:CDS | 30.0% | |
| ATGAATTGTTGCCATCAATT+AGG | + | chr7_2:2297377-2297396 | Msa1044090:CDS | 30.0% | |
| TGAATTGTTGCCATCAATTA+GGG | + | chr7_2:2297378-2297397 | Msa1044090:CDS | 30.0% | |
| CTACTCTCTCTCAAATATAT+TGG | - | chr7_2:2297637-2297656 | None:intergenic | 30.0% | |
| !! | AGTACTCACTTTAAAACAGA+TGG | - | chr7_2:2297889-2297908 | None:intergenic | 30.0% |
| !! | GCACTTATCCTAATTTGTTA+TGG | + | chr7_2:2298183-2298202 | Msa1044090:CDS | 30.0% |
| TCAAATTGAAGATACTAGCA+TGG | - | chr7_2:2298259-2298278 | None:intergenic | 30.0% | |
| !! | GCTTTGAAAGATTGCATAAA+TGG | + | chr7_2:2298293-2298312 | Msa1044090:CDS | 30.0% |
| ! | AGATTGCATAAATGGTTTTC+TGG | + | chr7_2:2298301-2298320 | Msa1044090:CDS | 30.0% |
| ! | ATAAATGGTTTTCTGGATGA+TGG | + | chr7_2:2298308-2298327 | Msa1044090:CDS | 30.0% |
| AAATGATGCTCGAATTATCA+TGG | + | chr7_2:2298408-2298427 | Msa1044090:CDS | 30.0% | |
| AGACATATAAACAACGGTAT+CGG | - | chr7_2:2299033-2299052 | None:intergenic | 30.0% | |
| ! | TATGTCTACAGTTTTCTCTA+TGG | + | chr7_2:2299046-2299065 | Msa1044090:CDS | 30.0% |
| TCTGCAATGAAATTGATTGA+GGG | - | chr7_2:2297052-2297071 | None:intergenic | 30.0% | |
| TTGCAGAGGAACATAAAAAA+AGG | + | chr7_2:2297065-2297084 | Msa1044090:CDS | 30.0% | |
| ATGAATTGTTGCCATCAATT+AGG | + | chr7_2:2297377-2297396 | Msa1044090:CDS | 30.0% | |
| TGAATTGTTGCCATCAATTA+GGG | + | chr7_2:2297378-2297397 | Msa1044090:CDS | 30.0% | |
| CTACTCTCTCTCAAATATAT+TGG | - | chr7_2:2297637-2297656 | None:intergenic | 30.0% | |
| !! | AGTACTCACTTTAAAACAGA+TGG | - | chr7_2:2297889-2297908 | None:intergenic | 30.0% |
| !! | GCACTTATCCTAATTTGTTA+TGG | + | chr7_2:2298183-2298202 | Msa1044090:CDS | 30.0% |
| TCAAATTGAAGATACTAGCA+TGG | - | chr7_2:2298259-2298278 | None:intergenic | 30.0% | |
| !! | GCTTTGAAAGATTGCATAAA+TGG | + | chr7_2:2298293-2298312 | Msa1044090:CDS | 30.0% |
| ! | AGATTGCATAAATGGTTTTC+TGG | + | chr7_2:2298301-2298320 | Msa1044090:CDS | 30.0% |
| ! | ATAAATGGTTTTCTGGATGA+TGG | + | chr7_2:2298308-2298327 | Msa1044090:CDS | 30.0% |
| AAATGATGCTCGAATTATCA+TGG | + | chr7_2:2298408-2298427 | Msa1044090:CDS | 30.0% | |
| AGACATATAAACAACGGTAT+CGG | - | chr7_2:2299033-2299052 | None:intergenic | 30.0% | |
| ! | TATGTCTACAGTTTTCTCTA+TGG | + | chr7_2:2299046-2299065 | Msa1044090:CDS | 30.0% |
| CTCTGCAATGAAATTGATTG+AGG | - | chr7_2:2297053-2297072 | None:intergenic | 35.0% | |
| CTCAATCAATTTCATTGCAG+AGG | + | chr7_2:2297051-2297070 | Msa1044090:CDS | 35.0% | |
| !!! | TTTTAGTGCTGCTTTGTGAA+GGG | - | chr7_2:2297110-2297129 | None:intergenic | 35.0% |
| CTAAAAGGTGATTGGAAAGA+AGG | + | chr7_2:2297124-2297143 | Msa1044090:CDS | 35.0% | |
| AAATCAGCAATGTTGGATCT+TGG | - | chr7_2:2297165-2297184 | None:intergenic | 35.0% | |
| CTGATTTCTGCCATAACAAA+TGG | + | chr7_2:2297178-2297197 | Msa1044090:CDS | 35.0% | |
| AAATCATGTTCACTTTGTCG+AGG | + | chr7_2:2297234-2297253 | Msa1044090:CDS | 35.0% | |
| CTTGCAATTCCAAATGATCA+CGG | - | chr7_2:2297279-2297298 | None:intergenic | 35.0% | |
| ! | TTTGGAATTGCAAGATTGCT+CGG | + | chr7_2:2297285-2297304 | Msa1044090:CDS | 35.0% |
| !! | TGTTCAACTTGCTGAGATAT+TGG | + | chr7_2:2297345-2297364 | Msa1044090:CDS | 35.0% |
| GAATTGTTGCCATCAATTAG+GGG | + | chr7_2:2297379-2297398 | Msa1044090:CDS | 35.0% | |
| TGTAAAACAGCCAAGTAAAG+AGG | - | chr7_2:2297421-2297440 | None:intergenic | 35.0% | |
| TTTACAAGCAAACAGTGAGA+TGG | + | chr7_2:2297435-2297454 | Msa1044090:CDS | 35.0% | |
| AAATACTCGAGGAAAACGAT+TGG | + | chr7_2:2297485-2297504 | Msa1044090:CDS | 35.0% | |
| GTTCCTCACTTGTATAAACT+CGG | + | chr7_2:2297516-2297535 | Msa1044090:CDS | 35.0% | |
| TTCCTCACTTGTATAAACTC+GGG | + | chr7_2:2297517-2297536 | Msa1044090:CDS | 35.0% | |
| TGTATAAACTCGGGACTTTA+TGG | + | chr7_2:2297526-2297545 | Msa1044090:CDS | 35.0% | |
| !! | TCTATTGGCTCGAAAACATT+CGG | + | chr7_2:2297774-2297793 | Msa1044090:CDS | 35.0% |
| TTTGTGGTTGTCAAAGTCTT+GGG | + | chr7_2:2297797-2297816 | Msa1044090:CDS | 35.0% | |
| ATCTCATCTCTCAGTCTATT+AGG | - | chr7_2:2297921-2297940 | None:intergenic | 35.0% | |
| TGTCGTATAAGCTTAAGCAT+TGG | - | chr7_2:2298041-2298060 | None:intergenic | 35.0% | |
| TTAAGCTTATACGACACATC+TGG | + | chr7_2:2298045-2298064 | Msa1044090:CDS | 35.0% | |
| TAAGCTTATACGACACATCT+GGG | + | chr7_2:2298046-2298065 | Msa1044090:CDS | 35.0% | |
| ! | GCGATAATTGTTACTTGAGA+CGG | - | chr7_2:2298122-2298141 | None:intergenic | 35.0% |
| CTGAGTTCCCATAACAAATT+AGG | - | chr7_2:2298194-2298213 | None:intergenic | 35.0% | |
| TTATGGGAACTCAGTAACAA+GGG | + | chr7_2:2298200-2298219 | Msa1044090:CDS | 35.0% | |
| AATTGAAGATACTAGCATGG+CGG | - | chr7_2:2298256-2298275 | None:intergenic | 35.0% | |
| !! | ACATATGTCATTGATTTCGC+AGG | + | chr7_2:2298501-2298520 | Msa1044090:intron | 35.0% |
| TGCTTCAAAAAGGAGAATCA+TGG | + | chr7_2:2298617-2298636 | Msa1044090:CDS | 35.0% | |
| !! | TTGCCTTTGAAGTTGATATC+CGG | + | chr7_2:2298886-2298905 | Msa1044090:CDS | 35.0% |
| TAGCGAATCATACGTTTACT+CGG | - | chr7_2:2299117-2299136 | None:intergenic | 35.0% | |
| CTCTGCAATGAAATTGATTG+AGG | - | chr7_2:2297053-2297072 | None:intergenic | 35.0% | |
| CTCAATCAATTTCATTGCAG+AGG | + | chr7_2:2297051-2297070 | Msa1044090:CDS | 35.0% | |
| !!! | TTTTAGTGCTGCTTTGTGAA+GGG | - | chr7_2:2297110-2297129 | None:intergenic | 35.0% |
| CTAAAAGGTGATTGGAAAGA+AGG | + | chr7_2:2297124-2297143 | Msa1044090:CDS | 35.0% | |
| AAATCAGCAATGTTGGATCT+TGG | - | chr7_2:2297165-2297184 | None:intergenic | 35.0% | |
| CTGATTTCTGCCATAACAAA+TGG | + | chr7_2:2297178-2297197 | Msa1044090:CDS | 35.0% | |
| AAATCATGTTCACTTTGTCG+AGG | + | chr7_2:2297234-2297253 | Msa1044090:CDS | 35.0% | |
| CTTGCAATTCCAAATGATCA+CGG | - | chr7_2:2297279-2297298 | None:intergenic | 35.0% | |
| ! | TTTGGAATTGCAAGATTGCT+CGG | + | chr7_2:2297285-2297304 | Msa1044090:CDS | 35.0% |
| !! | TGTTCAACTTGCTGAGATAT+TGG | + | chr7_2:2297345-2297364 | Msa1044090:CDS | 35.0% |
| GAATTGTTGCCATCAATTAG+GGG | + | chr7_2:2297379-2297398 | Msa1044090:CDS | 35.0% | |
| TGTAAAACAGCCAAGTAAAG+AGG | - | chr7_2:2297421-2297440 | None:intergenic | 35.0% | |
| TTTACAAGCAAACAGTGAGA+TGG | + | chr7_2:2297435-2297454 | Msa1044090:CDS | 35.0% | |
| AAATACTCGAGGAAAACGAT+TGG | + | chr7_2:2297485-2297504 | Msa1044090:CDS | 35.0% | |
| GTTCCTCACTTGTATAAACT+CGG | + | chr7_2:2297516-2297535 | Msa1044090:CDS | 35.0% | |
| TTCCTCACTTGTATAAACTC+GGG | + | chr7_2:2297517-2297536 | Msa1044090:CDS | 35.0% | |
| TGTATAAACTCGGGACTTTA+TGG | + | chr7_2:2297526-2297545 | Msa1044090:CDS | 35.0% | |
| !! | TCTATTGGCTCGAAAACATT+CGG | + | chr7_2:2297774-2297793 | Msa1044090:CDS | 35.0% |
| TTTGTGGTTGTCAAAGTCTT+GGG | + | chr7_2:2297797-2297816 | Msa1044090:CDS | 35.0% | |
| ATCTCATCTCTCAGTCTATT+AGG | - | chr7_2:2297921-2297940 | None:intergenic | 35.0% | |
| TGTCGTATAAGCTTAAGCAT+TGG | - | chr7_2:2298041-2298060 | None:intergenic | 35.0% | |
| TTAAGCTTATACGACACATC+TGG | + | chr7_2:2298045-2298064 | Msa1044090:CDS | 35.0% | |
| TAAGCTTATACGACACATCT+GGG | + | chr7_2:2298046-2298065 | Msa1044090:CDS | 35.0% | |
| ! | GCGATAATTGTTACTTGAGA+CGG | - | chr7_2:2298122-2298141 | None:intergenic | 35.0% |
| CTGAGTTCCCATAACAAATT+AGG | - | chr7_2:2298194-2298213 | None:intergenic | 35.0% | |
| TTATGGGAACTCAGTAACAA+GGG | + | chr7_2:2298200-2298219 | Msa1044090:CDS | 35.0% | |
| AATTGAAGATACTAGCATGG+CGG | - | chr7_2:2298256-2298275 | None:intergenic | 35.0% | |
| !! | ACATATGTCATTGATTTCGC+AGG | + | chr7_2:2298501-2298520 | Msa1044090:intron | 35.0% |
| TGCTTCAAAAAGGAGAATCA+TGG | + | chr7_2:2298617-2298636 | Msa1044090:CDS | 35.0% | |
| !! | TTGCCTTTGAAGTTGATATC+CGG | + | chr7_2:2298886-2298905 | Msa1044090:CDS | 35.0% |
| TAGCGAATCATACGTTTACT+CGG | - | chr7_2:2299117-2299136 | None:intergenic | 35.0% | |
| !! | TTTAGTGCTGCTTTGTGAAG+GGG | - | chr7_2:2297109-2297128 | None:intergenic | 40.0% |
| !!! | CTTTTAGTGCTGCTTTGTGA+AGG | - | chr7_2:2297111-2297130 | None:intergenic | 40.0% |
| CTTCACAAAGCAGCACTAAA+AGG | + | chr7_2:2297109-2297128 | Msa1044090:CDS | 40.0% | |
| AAGCAGCACTAAAAGGTGAT+TGG | + | chr7_2:2297116-2297135 | Msa1044090:CDS | 40.0% | |
| ATGGCAGAAATCAGCAATGT+TGG | - | chr7_2:2297172-2297191 | None:intergenic | 40.0% | |
| TTTCTGCCATAACAAATGGC+TGG | + | chr7_2:2297182-2297201 | Msa1044090:CDS | 40.0% | |
| TTCTGCCATAACAAATGGCT+GGG | + | chr7_2:2297183-2297202 | Msa1044090:CDS | 40.0% | |
| TGTTCACTTTGTCGAGGAAT+TGG | + | chr7_2:2297240-2297259 | Msa1044090:CDS | 40.0% | |
| ACTAATGCACCGTGATCATT+TGG | + | chr7_2:2297267-2297286 | Msa1044090:CDS | 40.0% | |
| TTGGAATTGCAAGATTGCTC+GGG | + | chr7_2:2297286-2297305 | Msa1044090:CDS | 40.0% | |
| !! | AGGTGTTACTCCTCTTTACT+TGG | + | chr7_2:2297408-2297427 | Msa1044090:CDS | 40.0% |
| AGCAGCATTTCAAGAACTAG+TGG | - | chr7_2:2297565-2297584 | None:intergenic | 40.0% | |
| ! | TGAGACGGGTTTACATCTAT+TGG | + | chr7_2:2297759-2297778 | Msa1044090:CDS | 40.0% |
| GTTTGTGGTTGTCAAAGTCT+TGG | + | chr7_2:2297796-2297815 | Msa1044090:CDS | 40.0% | |
| CATCATCTCTGAGTCATCTA+GGG | - | chr7_2:2298084-2298103 | None:intergenic | 40.0% | |
| ACAATTATCGCTGCAGAAGT+TGG | + | chr7_2:2298131-2298150 | Msa1044090:CDS | 40.0% | |
| GTTATGGGAACTCAGTAACA+AGG | + | chr7_2:2298199-2298218 | Msa1044090:CDS | 40.0% | |
| ! | TGATCGGCTCAATATAGTCT+CGG | + | chr7_2:2298373-2298392 | Msa1044090:CDS | 40.0% |
| GCTCGAATTATCATGGTTTG+AGG | + | chr7_2:2298415-2298434 | Msa1044090:CDS | 40.0% | |
| !! | TATGTCATTGATTTCGCAGG+AGG | + | chr7_2:2298504-2298523 | Msa1044090:intron | 40.0% |
| TCTTTCGTAAATAGTTCGCG+AGG | - | chr7_2:2298586-2298605 | None:intergenic | 40.0% | |
| CACGCAGAATTGCTTCAAAA+AGG | + | chr7_2:2298607-2298626 | Msa1044090:CDS | 40.0% | |
| GCAAACAGCGAATTCTTGTA+TGG | + | chr7_2:2298645-2298664 | Msa1044090:CDS | 40.0% | |
| GTGTTATCATTGTTTCCACC+TGG | - | chr7_2:2298721-2298740 | None:intergenic | 40.0% | |
| AAAGCAAATACGAGGAATGC+TGG | - | chr7_2:2298769-2298788 | None:intergenic | 40.0% | |
| AGTCGGATAAAGCAAATACG+AGG | - | chr7_2:2298777-2298796 | None:intergenic | 40.0% | |
| ATTTGCTTTATCCGACTCCA+TGG | + | chr7_2:2298780-2298799 | Msa1044090:CDS | 40.0% | |
| AGTCCGGATATCAACTTCAA+AGG | - | chr7_2:2298892-2298911 | None:intergenic | 40.0% | |
| !! | TTTAGTGCTGCTTTGTGAAG+GGG | - | chr7_2:2297109-2297128 | None:intergenic | 40.0% |
| !!! | CTTTTAGTGCTGCTTTGTGA+AGG | - | chr7_2:2297111-2297130 | None:intergenic | 40.0% |
| CTTCACAAAGCAGCACTAAA+AGG | + | chr7_2:2297109-2297128 | Msa1044090:CDS | 40.0% | |
| AAGCAGCACTAAAAGGTGAT+TGG | + | chr7_2:2297116-2297135 | Msa1044090:CDS | 40.0% | |
| ATGGCAGAAATCAGCAATGT+TGG | - | chr7_2:2297172-2297191 | None:intergenic | 40.0% | |
| TTTCTGCCATAACAAATGGC+TGG | + | chr7_2:2297182-2297201 | Msa1044090:CDS | 40.0% | |
| TTCTGCCATAACAAATGGCT+GGG | + | chr7_2:2297183-2297202 | Msa1044090:CDS | 40.0% | |
| TGTTCACTTTGTCGAGGAAT+TGG | + | chr7_2:2297240-2297259 | Msa1044090:CDS | 40.0% | |
| ACTAATGCACCGTGATCATT+TGG | + | chr7_2:2297267-2297286 | Msa1044090:CDS | 40.0% | |
| TTGGAATTGCAAGATTGCTC+GGG | + | chr7_2:2297286-2297305 | Msa1044090:CDS | 40.0% | |
| !! | AGGTGTTACTCCTCTTTACT+TGG | + | chr7_2:2297408-2297427 | Msa1044090:CDS | 40.0% |
| AGCAGCATTTCAAGAACTAG+TGG | - | chr7_2:2297565-2297584 | None:intergenic | 40.0% | |
| ! | TGAGACGGGTTTACATCTAT+TGG | + | chr7_2:2297759-2297778 | Msa1044090:CDS | 40.0% |
| GTTTGTGGTTGTCAAAGTCT+TGG | + | chr7_2:2297796-2297815 | Msa1044090:CDS | 40.0% | |
| CATCATCTCTGAGTCATCTA+GGG | - | chr7_2:2298084-2298103 | None:intergenic | 40.0% | |
| ACAATTATCGCTGCAGAAGT+TGG | + | chr7_2:2298131-2298150 | Msa1044090:CDS | 40.0% | |
| GTTATGGGAACTCAGTAACA+AGG | + | chr7_2:2298199-2298218 | Msa1044090:CDS | 40.0% | |
| ! | TGATCGGCTCAATATAGTCT+CGG | + | chr7_2:2298373-2298392 | Msa1044090:CDS | 40.0% |
| GCTCGAATTATCATGGTTTG+AGG | + | chr7_2:2298415-2298434 | Msa1044090:CDS | 40.0% | |
| !! | TATGTCATTGATTTCGCAGG+AGG | + | chr7_2:2298504-2298523 | Msa1044090:intron | 40.0% |
| TCTTTCGTAAATAGTTCGCG+AGG | - | chr7_2:2298586-2298605 | None:intergenic | 40.0% | |
| CACGCAGAATTGCTTCAAAA+AGG | + | chr7_2:2298607-2298626 | Msa1044090:CDS | 40.0% | |
| GCAAACAGCGAATTCTTGTA+TGG | + | chr7_2:2298645-2298664 | Msa1044090:CDS | 40.0% | |
| GTGTTATCATTGTTTCCACC+TGG | - | chr7_2:2298721-2298740 | None:intergenic | 40.0% | |
| AAAGCAAATACGAGGAATGC+TGG | - | chr7_2:2298769-2298788 | None:intergenic | 40.0% | |
| AGTCGGATAAAGCAAATACG+AGG | - | chr7_2:2298777-2298796 | None:intergenic | 40.0% | |
| ATTTGCTTTATCCGACTCCA+TGG | + | chr7_2:2298780-2298799 | Msa1044090:CDS | 40.0% | |
| AGTCCGGATATCAACTTCAA+AGG | - | chr7_2:2298892-2298911 | None:intergenic | 40.0% | |
| !! | GAAGGGGAACACATTGGTTT+AGG | - | chr7_2:2297093-2297112 | None:intergenic | 45.0% |
| CTTTGTGAAGGGGAACACAT+TGG | - | chr7_2:2297099-2297118 | None:intergenic | 45.0% | |
| ! | TTGTGTTTTGCTGCAGCAGT+TGG | + | chr7_2:2297319-2297338 | Msa1044090:CDS | 45.0% |
| TTGTTGCCATCAATTAGGGG+TGG | + | chr7_2:2297382-2297401 | Msa1044090:CDS | 45.0% | |
| AAGCAAACAGTGAGATGGCA+TGG | + | chr7_2:2297440-2297459 | Msa1044090:CDS | 45.0% | |
| GTCCCGAGTTTATACAAGTG+AGG | - | chr7_2:2297522-2297541 | None:intergenic | 45.0% | |
| ! | GCTCGAAAACATTCGGTTTG+TGG | + | chr7_2:2297781-2297800 | Msa1044090:CDS | 45.0% |
| CCATCATCTCTGAGTCATCT+AGG | - | chr7_2:2298085-2298104 | None:intergenic | 45.0% | |
| CCTAGATGACTCAGAGATGA+TGG | + | chr7_2:2298082-2298101 | Msa1044090:CDS | 45.0% | |
| ACTATATTGAGCCGATCAGG+CGG | - | chr7_2:2298371-2298390 | None:intergenic | 45.0% | |
| GAGACTATATTGAGCCGATC+AGG | - | chr7_2:2298374-2298393 | None:intergenic | 45.0% | |
| ! | GATCGGCTCAATATAGTCTC+GGG | + | chr7_2:2298374-2298393 | Msa1044090:CDS | 45.0% |
| GTTTCGACTCTCATAGCTAC+AGG | + | chr7_2:2298670-2298689 | Msa1044090:CDS | 45.0% | |
| ! | TCAGCTGCATTTAGCTTACC+AGG | + | chr7_2:2298700-2298719 | Msa1044090:CDS | 45.0% |
| TGAAGACGAGATAAGTGCCA+TGG | - | chr7_2:2298800-2298819 | None:intergenic | 45.0% | |
| CATCCTTATCTCGCGATATG+CGG | + | chr7_2:2298843-2298862 | Msa1044090:CDS | 45.0% | |
| !! | GAAGTTGATATCCGGACTAG+TGG | + | chr7_2:2298894-2298913 | Msa1044090:CDS | 45.0% |
| CACAAATAACGCCACTAGTC+CGG | - | chr7_2:2298908-2298927 | None:intergenic | 45.0% | |
| !! | AAGGCATTGCGCCTATTTCA+TGG | + | chr7_2:2299218-2299237 | Msa1044090:three_prime_UTR | 45.0% |
| !! | GAAGGGGAACACATTGGTTT+AGG | - | chr7_2:2297093-2297112 | None:intergenic | 45.0% |
| CTTTGTGAAGGGGAACACAT+TGG | - | chr7_2:2297099-2297118 | None:intergenic | 45.0% | |
| ! | TTGTGTTTTGCTGCAGCAGT+TGG | + | chr7_2:2297319-2297338 | Msa1044090:CDS | 45.0% |
| TTGTTGCCATCAATTAGGGG+TGG | + | chr7_2:2297382-2297401 | Msa1044090:CDS | 45.0% | |
| AAGCAAACAGTGAGATGGCA+TGG | + | chr7_2:2297440-2297459 | Msa1044090:CDS | 45.0% | |
| GTCCCGAGTTTATACAAGTG+AGG | - | chr7_2:2297522-2297541 | None:intergenic | 45.0% | |
| ! | GCTCGAAAACATTCGGTTTG+TGG | + | chr7_2:2297781-2297800 | Msa1044090:CDS | 45.0% |
| CCATCATCTCTGAGTCATCT+AGG | - | chr7_2:2298085-2298104 | None:intergenic | 45.0% | |
| CCTAGATGACTCAGAGATGA+TGG | + | chr7_2:2298082-2298101 | Msa1044090:CDS | 45.0% | |
| ACTATATTGAGCCGATCAGG+CGG | - | chr7_2:2298371-2298390 | None:intergenic | 45.0% | |
| GAGACTATATTGAGCCGATC+AGG | - | chr7_2:2298374-2298393 | None:intergenic | 45.0% | |
| ! | GATCGGCTCAATATAGTCTC+GGG | + | chr7_2:2298374-2298393 | Msa1044090:CDS | 45.0% |
| GTTTCGACTCTCATAGCTAC+AGG | + | chr7_2:2298670-2298689 | Msa1044090:CDS | 45.0% | |
| ! | TCAGCTGCATTTAGCTTACC+AGG | + | chr7_2:2298700-2298719 | Msa1044090:CDS | 45.0% |
| TGAAGACGAGATAAGTGCCA+TGG | - | chr7_2:2298800-2298819 | None:intergenic | 45.0% | |
| CATCCTTATCTCGCGATATG+CGG | + | chr7_2:2298843-2298862 | Msa1044090:CDS | 45.0% | |
| !! | GAAGTTGATATCCGGACTAG+TGG | + | chr7_2:2298894-2298913 | Msa1044090:CDS | 45.0% |
| CACAAATAACGCCACTAGTC+CGG | - | chr7_2:2298908-2298927 | None:intergenic | 45.0% | |
| !! | AAGGCATTGCGCCTATTTCA+TGG | + | chr7_2:2299218-2299237 | Msa1044090:three_prime_UTR | 45.0% |
| !!! | AATAAATTTTATTGTTATTA+TGG | + | chr7_2:2299160-2299179 | Msa1044090:three_prime_UTR | 5.0% |
| !!! | AATAAATTTTATTGTTATTA+TGG | + | chr7_2:2299160-2299179 | Msa1044090:three_prime_UTR | 5.0% |
| ! | GGTTGCCCAGCCATTTGTTA+TGG | - | chr7_2:2297191-2297210 | None:intergenic | 50.0% |
| AACCGCACTCCATATTGCAG+CGG | + | chr7_2:2297207-2297226 | Msa1044090:CDS | 50.0% | |
| ! | GATTTGCTCCCGCTGCAATA+TGG | - | chr7_2:2297219-2297238 | None:intergenic | 50.0% |
| CCTTGTCCACCCCTAATTGA+TGG | - | chr7_2:2297391-2297410 | None:intergenic | 50.0% | |
| CCATCAATTAGGGGTGGACA+AGG | + | chr7_2:2297388-2297407 | Msa1044090:CDS | 50.0% | |
| !! | GACACACTTGCTTTTGCTCG+CGG | + | chr7_2:2297724-2297743 | Msa1044090:CDS | 50.0% |
| CGGAGGTGATAGCAATGAGA+CGG | + | chr7_2:2297744-2297763 | Msa1044090:CDS | 50.0% | |
| GGAGGTGATAGCAATGAGAC+GGG | + | chr7_2:2297745-2297764 | Msa1044090:CDS | 50.0% | |
| CAATGTTAGCACCGCCTGAT+CGG | + | chr7_2:2298357-2298376 | Msa1044090:CDS | 50.0% | |
| ! | GCTGCATTTAGCTTACCAGG+TGG | + | chr7_2:2298703-2298722 | Msa1044090:CDS | 50.0% |
| CGAGATAAGTGCCATGGAGT+CGG | - | chr7_2:2298794-2298813 | None:intergenic | 50.0% | |
| CGCATATCGCGAGATAAGGA+TGG | - | chr7_2:2298845-2298864 | None:intergenic | 50.0% | |
| ! | GGTTGCCCAGCCATTTGTTA+TGG | - | chr7_2:2297191-2297210 | None:intergenic | 50.0% |
| AACCGCACTCCATATTGCAG+CGG | + | chr7_2:2297207-2297226 | Msa1044090:CDS | 50.0% | |
| ! | GATTTGCTCCCGCTGCAATA+TGG | - | chr7_2:2297219-2297238 | None:intergenic | 50.0% |
| CCTTGTCCACCCCTAATTGA+TGG | - | chr7_2:2297391-2297410 | None:intergenic | 50.0% | |
| CCATCAATTAGGGGTGGACA+AGG | + | chr7_2:2297388-2297407 | Msa1044090:CDS | 50.0% | |
| !! | GACACACTTGCTTTTGCTCG+CGG | + | chr7_2:2297724-2297743 | Msa1044090:CDS | 50.0% |
| CGGAGGTGATAGCAATGAGA+CGG | + | chr7_2:2297744-2297763 | Msa1044090:CDS | 50.0% | |
| GGAGGTGATAGCAATGAGAC+GGG | + | chr7_2:2297745-2297764 | Msa1044090:CDS | 50.0% | |
| CAATGTTAGCACCGCCTGAT+CGG | + | chr7_2:2298357-2298376 | Msa1044090:CDS | 50.0% | |
| ! | GCTGCATTTAGCTTACCAGG+TGG | + | chr7_2:2298703-2298722 | Msa1044090:CDS | 50.0% |
| CGAGATAAGTGCCATGGAGT+CGG | - | chr7_2:2298794-2298813 | None:intergenic | 50.0% | |
| CGCATATCGCGAGATAAGGA+TGG | - | chr7_2:2298845-2298864 | None:intergenic | 50.0% | |
| ACCGCACTCCATATTGCAGC+GGG | + | chr7_2:2297208-2297227 | Msa1044090:CDS | 55.0% | |
| TCCCGCTGCAATATGGAGTG+CGG | - | chr7_2:2297212-2297231 | None:intergenic | 55.0% | |
| !! | ACACTTGCTTTTGCTCGCGG+AGG | + | chr7_2:2297727-2297746 | Msa1044090:CDS | 55.0% |
| GCTCCGCATATCGCGAGATA+AGG | - | chr7_2:2298849-2298868 | None:intergenic | 55.0% | |
| ACCGCACTCCATATTGCAGC+GGG | + | chr7_2:2297208-2297227 | Msa1044090:CDS | 55.0% | |
| TCCCGCTGCAATATGGAGTG+CGG | - | chr7_2:2297212-2297231 | None:intergenic | 55.0% | |
| !! | ACACTTGCTTTTGCTCGCGG+AGG | + | chr7_2:2297727-2297746 | Msa1044090:CDS | 55.0% |
| GCTCCGCATATCGCGAGATA+AGG | - | chr7_2:2298849-2298868 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 2297004 | 2299277 | 2297004 | ID=Msa1044090;Name=Msa1044090 |
| chr7_2 | mRNA | 2297004 | 2299277 | 2297004 | ID=Msa1044090-mRNA-1;Parent=Msa1044090;Name=Msa1044090-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.33|0.25|1|1|1|4|140|573 |
| chr7_2 | exon | 2297004 | 2297547 | 2297004 | ID=Msa1044090-mRNA-1:exon:553;Parent=Msa1044090-mRNA-1 |
| chr7_2 | exon | 2297695 | 2297844 | 2297695 | ID=Msa1044090-mRNA-1:exon:554;Parent=Msa1044090-mRNA-1 |
| chr7_2 | exon | 2298024 | 2298436 | 2298024 | ID=Msa1044090-mRNA-1:exon:555;Parent=Msa1044090-mRNA-1 |
| chr7_2 | exon | 2298523 | 2299277 | 2298523 | ID=Msa1044090-mRNA-1:exon:556;Parent=Msa1044090-mRNA-1 |
| chr7_2 | CDS | 2297004 | 2297547 | 2297004 | ID=Msa1044090-mRNA-1:cds;Parent=Msa1044090-mRNA-1 |
| chr7_2 | CDS | 2297695 | 2297844 | 2297695 | ID=Msa1044090-mRNA-1:cds;Parent=Msa1044090-mRNA-1 |
| chr7_2 | CDS | 2298024 | 2298436 | 2298024 | ID=Msa1044090-mRNA-1:cds;Parent=Msa1044090-mRNA-1 |
| chr7_2 | CDS | 2298523 | 2299137 | 2298523 | ID=Msa1044090-mRNA-1:cds;Parent=Msa1044090-mRNA-1 |
| chr7_2 | three_prime_UTR | 2299138 | 2299277 | 2299138 | ID=Msa1044090-mRNA-1:three_prime_utr;Parent=Msa1044090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
