Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243930 | XP_013463390.2 | 91.767 | 583 | 17 | 1 | 4 | 555 | 2 | 584 | 0.0 | 1087 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243930 | sp|Q9C7A2|ITN1_ARATH | 19.961 | 516 | 334 | 13 | 40 | 518 | 62 | 535 | 1.51e-13 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243930 | A0A396J5U6 | 91.767 | 583 | 17 | 1 | 4 | 555 | 2 | 584 | 0.0 | 1087 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012520 | Msa0243930 | 0.839419 | 1.602812e-57 | -8.615850e-47 |
| Msa0041000 | Msa0243930 | 0.822275 | 2.585156e-53 | -8.615850e-47 |
| Msa0051460 | Msa0243930 | 0.800718 | 1.263533e-48 | -8.615850e-47 |
| Msa0088550 | Msa0243930 | 0.832762 | 7.853932e-56 | -8.615850e-47 |
| Msa0090280 | Msa0243930 | -0.800708 | 1.269904e-48 | -8.615850e-47 |
| Msa0101840 | Msa0243930 | 0.808684 | 2.744661e-50 | -8.615850e-47 |
| Msa0124110 | Msa0243930 | 0.834912 | 2.277366e-56 | -8.615850e-47 |
| Msa0135360 | Msa0243930 | 0.831657 | 1.474543e-55 | -8.615850e-47 |
| Msa0135590 | Msa0243930 | 0.800018 | 1.754354e-48 | -8.615850e-47 |
| Msa0135820 | Msa0243930 | 0.808648 | 2.792692e-50 | -8.615850e-47 |
| Msa0141230 | Msa0243930 | 0.810705 | 1.009484e-50 | -8.615850e-47 |
| Msa0142240 | Msa0243930 | 0.829020 | 6.503236e-55 | -8.615850e-47 |
| Msa0143920 | Msa0243930 | 0.802886 | 4.533693e-49 | -8.615850e-47 |
| Msa0152420 | Msa0243930 | 0.837161 | 6.118771e-57 | -8.615850e-47 |
| Msa0153440 | Msa0243930 | 0.801690 | 7.994089e-49 | -8.615850e-47 |
| Msa0165430 | Msa0243930 | 0.848030 | 7.944352e-60 | -8.615850e-47 |
| Msa0165510 | Msa0243930 | 0.801412 | 9.113852e-49 | -8.615850e-47 |
| Msa0179860 | Msa0243930 | 0.819460 | 1.147998e-52 | -8.615850e-47 |
| Msa0180300 | Msa0243930 | 0.801722 | 7.872290e-49 | -8.615850e-47 |
| Msa0185640 | Msa0243930 | -0.817082 | 3.964571e-52 | -8.615850e-47 |
| Msa0190640 | Msa0243930 | 0.802456 | 5.562420e-49 | -8.615850e-47 |
| Msa0201250 | Msa0243930 | 0.828263 | 9.905315e-55 | -8.615850e-47 |
| Msa0201330 | Msa0243930 | 0.951515 | 1.734773e-109 | -8.615850e-47 |
| Msa0201370 | Msa0243930 | 0.963532 | 3.353818e-122 | -8.615850e-47 |
| Msa0201390 | Msa0243930 | 0.864431 | 1.222174e-64 | -8.615850e-47 |
| Msa0208390 | Msa0243930 | 0.804977 | 1.666927e-49 | -8.615850e-47 |
| Msa0226250 | Msa0243930 | 0.809823 | 1.563807e-50 | -8.615850e-47 |
| Msa0243910 | Msa0243930 | 0.950462 | 1.567504e-108 | -8.615850e-47 |
| Msa0243930 | Msa0243940 | 0.881552 | 2.183314e-70 | -8.615850e-47 |
| Msa0243930 | Msa0245880 | 0.823463 | 1.366799e-53 | -8.615850e-47 |
| Msa0243930 | Msa0266000 | -0.828822 | 7.258636e-55 | -8.615850e-47 |
| Msa0243930 | Msa0275670 | 0.819790 | 9.651190e-53 | -8.615850e-47 |
| Msa0243930 | Msa0282590 | 0.955139 | 6.018423e-113 | -8.615850e-47 |
| Msa0243930 | Msa0282600 | 0.850320 | 1.832091e-60 | -8.615850e-47 |
| Msa0243930 | Msa0304740 | 0.828012 | 1.139048e-54 | -8.615850e-47 |
| Msa0243930 | Msa0304990 | 0.811773 | 5.919569e-51 | -8.615850e-47 |
| Msa0243930 | Msa0312690 | -0.803770 | 2.974879e-49 | -8.615850e-47 |
| Msa0243930 | Msa0331590 | 0.830651 | 2.604095e-55 | -8.615850e-47 |
| Msa0243930 | Msa0331920 | 0.817646 | 2.960108e-52 | -8.615850e-47 |
| Msa0243930 | Msa0342340 | -0.819394 | 1.188845e-52 | -8.615850e-47 |
| Msa0243930 | Msa0362740 | 0.842767 | 2.114522e-58 | -8.615850e-47 |
| Msa0243930 | Msa0369360 | 0.821914 | 3.133345e-53 | -8.615850e-47 |
| Msa0243930 | Msa0405250 | -0.816104 | 6.568348e-52 | -8.615850e-47 |
| Msa0243930 | Msa0416800 | 0.836259 | 1.039192e-56 | -8.615850e-47 |
| Msa0243930 | Msa0448550 | -0.802794 | 4.736313e-49 | -8.615850e-47 |
| Msa0243930 | Msa0457370 | 0.831497 | 1.614051e-55 | -8.615850e-47 |
| Msa0243930 | Msa0463460 | 0.828791 | 7.387088e-55 | -8.615850e-47 |
| Msa0243930 | Msa0493850 | 0.816698 | 4.835512e-52 | -8.615850e-47 |
| Msa0243930 | Msa0509020 | 0.834500 | 2.892176e-56 | -8.615850e-47 |
| Msa0243930 | Msa0533290 | 0.806125 | 9.576430e-50 | -8.615850e-47 |
| Msa0243930 | Msa0557680 | 0.854320 | 1.331220e-61 | -8.615850e-47 |
| Msa0243930 | Msa0559250 | 0.807039 | 6.141803e-50 | -8.615850e-47 |
| Msa0243930 | Msa0562650 | 0.822702 | 2.056452e-53 | -8.615850e-47 |
| Msa0243930 | Msa0567020 | 0.824530 | 7.678185e-54 | -8.615850e-47 |
| Msa0243930 | Msa0569370 | 0.819572 | 1.082271e-52 | -8.615850e-47 |
| Msa0243930 | Msa0586430 | 0.839878 | 1.217484e-57 | -8.615850e-47 |
| Msa0243930 | Msa0607180 | 0.803788 | 2.949547e-49 | -8.615850e-47 |
| Msa0243930 | Msa0616560 | -0.839394 | 1.626473e-57 | -8.615850e-47 |
| Msa0243930 | Msa0626470 | 0.823980 | 1.034179e-53 | -8.615850e-47 |
| Msa0243930 | Msa0629890 | 0.816778 | 4.640984e-52 | -8.615850e-47 |
| Msa0243930 | Msa0641020 | 0.824152 | 9.422619e-54 | -8.615850e-47 |
| Msa0243930 | Msa0645460 | 0.806371 | 8.498560e-50 | -8.615850e-47 |
| Msa0243930 | Msa0653020 | 0.830204 | 3.349924e-55 | -8.615850e-47 |
| Msa0243930 | Msa0655990 | -0.837680 | 4.506949e-57 | -8.615850e-47 |
| Msa0243930 | Msa0658570 | 0.826532 | 2.576216e-54 | -8.615850e-47 |
| Msa0243930 | Msa0664160 | 0.840681 | 7.508465e-58 | -8.615850e-47 |
| Msa0243930 | Msa0686850 | 0.801105 | 1.053187e-48 | -8.615850e-47 |
| Msa0243930 | Msa0692620 | 0.806155 | 9.434860e-50 | -8.615850e-47 |
| Msa0243930 | Msa0695410 | 0.826436 | 2.715959e-54 | -8.615850e-47 |
| Msa0243930 | Msa0696740 | 0.807538 | 4.814238e-50 | -8.615850e-47 |
| Msa0243930 | Msa0696770 | 0.810148 | 1.330950e-50 | -8.615850e-47 |
| Msa0243930 | Msa0699920 | -0.821125 | 4.767034e-53 | -8.615850e-47 |
| Msa0243930 | Msa0701840 | -0.833805 | 4.318778e-56 | -8.615850e-47 |
| Msa0243930 | Msa0703490 | 0.844639 | 6.673324e-59 | -8.615850e-47 |
| Msa0243930 | Msa0715720 | 0.808689 | 2.737618e-50 | -8.615850e-47 |
| Msa0243930 | Msa0718240 | 0.827965 | 1.168814e-54 | -8.615850e-47 |
| Msa0243930 | Msa0719490 | -0.835314 | 1.803867e-56 | -8.615850e-47 |
| Msa0243930 | Msa0722930 | 0.824326 | 8.575466e-54 | -8.615850e-47 |
| Msa0243930 | Msa0723140 | 0.815431 | 9.279566e-52 | -8.615850e-47 |
| Msa0243930 | Msa0733200 | 0.876939 | 9.364575e-69 | -8.615850e-47 |
| Msa0243930 | Msa0736060 | 0.829258 | 5.693775e-55 | -8.615850e-47 |
| Msa0243930 | Msa0773610 | 0.808777 | 2.621304e-50 | -8.615850e-47 |
| Msa0243930 | Msa0774240 | 0.811733 | 6.038795e-51 | -8.615850e-47 |
| Msa0243930 | Msa0776030 | 0.815753 | 7.864481e-52 | -8.615850e-47 |
| Msa0243930 | Msa0777930 | 0.823452 | 1.374899e-53 | -8.615850e-47 |
| Msa0243930 | Msa0811000 | 0.810183 | 1.308183e-50 | -8.615850e-47 |
| Msa0243930 | Msa0811790 | 0.810707 | 1.008208e-50 | -8.615850e-47 |
| Msa0243930 | Msa0839230 | 0.841704 | 4.042179e-58 | -8.615850e-47 |
| Msa0243930 | Msa0839330 | 0.808570 | 2.902311e-50 | -8.615850e-47 |
| Msa0243930 | Msa0843280 | 0.809748 | 1.623407e-50 | -8.615850e-47 |
| Msa0243930 | Msa0862020 | 0.800059 | 1.720905e-48 | -8.615850e-47 |
| Msa0243930 | Msa0885280 | 0.807171 | 5.759323e-50 | -8.615850e-47 |
| Msa0243930 | Msa0886330 | -0.801436 | 9.011772e-49 | -8.615850e-47 |
| Msa0243930 | Msa0886660 | 0.831559 | 1.558786e-55 | -8.615850e-47 |
| Msa0243930 | Msa0900200 | 0.801034 | 1.089320e-48 | -8.615850e-47 |
| Msa0243930 | Msa0902980 | 0.821801 | 3.328003e-53 | -8.615850e-47 |
| Msa0243930 | Msa0912200 | 0.811079 | 8.375681e-51 | -8.615850e-47 |
| Msa0243930 | Msa0912470 | 0.800155 | 1.645550e-48 | -8.615850e-47 |
| Msa0243930 | Msa0921630 | 0.835649 | 1.483543e-56 | -8.615850e-47 |
| Msa0243930 | Msa0946120 | 0.826088 | 3.285657e-54 | -8.615850e-47 |
| Msa0243930 | Msa0946680 | 0.830635 | 2.628507e-55 | -8.615850e-47 |
| Msa0243930 | Msa0951720 | 0.824443 | 8.050791e-54 | -8.615850e-47 |
| Msa0243930 | Msa0960270 | 0.807638 | 4.584345e-50 | -8.615850e-47 |
| Msa0243930 | Msa0961420 | -0.804151 | 2.478995e-49 | -8.615850e-47 |
| Msa0243930 | Msa0965520 | 0.826332 | 2.874407e-54 | -8.615850e-47 |
| Msa0243930 | Msa0968320 | -0.810312 | 1.227404e-50 | -8.615850e-47 |
| Msa0243930 | Msa0987890 | 0.815291 | 9.965164e-52 | -8.615850e-47 |
| Msa0243930 | Msa0996130 | 0.804571 | 2.026581e-49 | -8.615850e-47 |
| Msa0243930 | Msa1000020 | 0.828159 | 1.049464e-54 | -8.615850e-47 |
| Msa0243930 | Msa1001200 | 0.830556 | 2.748374e-55 | -8.615850e-47 |
| Msa0243930 | Msa1008340 | 0.852448 | 4.587388e-61 | -8.615850e-47 |
| Msa0243930 | Msa1009020 | 0.832553 | 8.850310e-56 | -8.615850e-47 |
| Msa0243930 | Msa1026500 | 0.836637 | 8.325168e-57 | -8.615850e-47 |
| Msa0243930 | Msa1029090 | 0.837963 | 3.811446e-57 | -8.615850e-47 |
| Msa0243930 | Msa1036390 | 0.808847 | 2.532791e-50 | -8.615850e-47 |
| Msa0243930 | Msa1037710 | 0.806692 | 7.272211e-50 | -8.615850e-47 |
| Msa0243930 | Msa1041730 | 0.840653 | 7.637897e-58 | -8.615850e-47 |
| Msa0243930 | Msa1042710 | 0.801107 | 1.052374e-48 | -8.615850e-47 |
| Msa0243930 | Msa1044090 | 0.940422 | 2.399302e-100 | -8.615850e-47 |
| Msa0243930 | Msa1049950 | 0.829836 | 4.117984e-55 | -8.615850e-47 |
| Msa0243930 | Msa1074570 | 0.822181 | 2.717234e-53 | -8.615850e-47 |
| Msa0243930 | Msa1076480 | 0.812257 | 4.644048e-51 | -8.615850e-47 |
| Msa0243930 | Msa1076680 | 0.803053 | 4.187386e-49 | -8.615850e-47 |
| Msa0243930 | Msa1083410 | 0.848454 | 6.066086e-60 | -8.615850e-47 |
| Msa0243930 | Msa1098560 | 0.809542 | 1.797645e-50 | -8.615850e-47 |
| Msa0243930 | Msa1100170 | 0.835393 | 1.722715e-56 | -8.615850e-47 |
| Msa0243930 | Msa1101140 | 0.806405 | 8.358227e-50 | -8.615850e-47 |
| Msa0243930 | Msa1101620 | 0.807997 | 3.845572e-50 | -8.615850e-47 |
| Msa0243930 | Msa1111760 | 0.850134 | 2.066211e-60 | -8.615850e-47 |
| Msa0243930 | Msa1121660 | 0.823376 | 1.432168e-53 | -8.615850e-47 |
| Msa0243930 | Msa1122660 | 0.821469 | 3.971133e-53 | -8.615850e-47 |
| Msa0243930 | Msa1125080 | 0.843525 | 1.327910e-58 | -8.615850e-47 |
| Msa0243930 | Msa1128160 | 0.826938 | 2.061399e-54 | -8.615850e-47 |
| Msa0243930 | Msa1139240 | 0.858959 | 5.756915e-63 | -8.615850e-47 |
| Msa0243930 | Msa1154070 | 0.854655 | 1.065026e-61 | -8.615850e-47 |
| Msa0243930 | Msa1156180 | 0.842954 | 1.885723e-58 | -8.615850e-47 |
| Msa0243930 | Msa1165360 | 0.828251 | 9.976090e-55 | -8.615850e-47 |
| Msa0243930 | Msa1167110 | -0.809972 | 1.453034e-50 | -8.615850e-47 |
| Msa0243930 | Msa1167220 | 0.850348 | 1.799222e-60 | -8.615850e-47 |
| Msa0243930 | Msa1177060 | 0.819854 | 9.333495e-53 | -8.615850e-47 |
| Msa0243930 | Msa1177070 | 0.812676 | 3.760940e-51 | -8.615850e-47 |
| Msa0243930 | Msa1179120 | 0.826750 | 2.285312e-54 | -8.615850e-47 |
| Msa0243930 | Msa1204980 | -0.811479 | 6.858568e-51 | -8.615850e-47 |
| Msa0243930 | Msa1205010 | -0.808863 | 2.512583e-50 | -8.615850e-47 |
| Msa0243930 | Msa1209560 | 0.816446 | 5.507146e-52 | -8.615850e-47 |
| Msa0243930 | Msa1217900 | -0.803296 | 3.729604e-49 | -8.615850e-47 |
| Msa0243930 | Msa1228210 | 0.815246 | 1.019952e-51 | -8.615850e-47 |
| Msa0243930 | Msa1239310 | 0.806525 | 7.886974e-50 | -8.615850e-47 |
| Msa0243930 | Msa1246040 | 0.832474 | 9.260474e-56 | -8.615850e-47 |
| Msa0243930 | Msa1256540 | -0.820030 | 8.508619e-53 | -8.615850e-47 |
| Msa0243930 | Msa1267200 | 0.813412 | 2.593029e-51 | -8.615850e-47 |
| Msa0243930 | Msa1271280 | 0.826185 | 3.115705e-54 | -8.615850e-47 |
| Msa0243930 | Msa1271290 | 0.827063 | 1.924228e-54 | -8.615850e-47 |
| Msa0243930 | Msa1271300 | 0.822039 | 2.932218e-53 | -8.615850e-47 |
| Msa0243930 | Msa1279860 | 0.802119 | 6.527305e-49 | -8.615850e-47 |
| Msa0243930 | Msa1279870 | 0.814057 | 1.869719e-51 | -8.615850e-47 |
| Msa0243930 | Msa1284140 | 0.800505 | 1.396343e-48 | -8.615850e-47 |
| Msa0243930 | Msa1296960 | -0.826535 | 2.571767e-54 | -8.615850e-47 |
| Msa0243930 | Msa1298260 | 0.813714 | 2.225052e-51 | -8.615850e-47 |
| Msa0243930 | Msa1298910 | 0.800114 | 1.677215e-48 | -8.615850e-47 |
| Msa0243930 | Msa1316980 | 0.817501 | 3.191352e-52 | -8.615850e-47 |
| Msa0243930 | Msa1324780 | 0.804087 | 2.555602e-49 | -8.615850e-47 |
| Msa0243930 | Msa1330530 | 0.807916 | 3.999936e-50 | -8.615850e-47 |
| Msa0243930 | Msa1335770 | 0.853120 | 2.947763e-61 | -8.615850e-47 |
| Msa0243930 | Msa1336470 | 0.808650 | 2.790754e-50 | -8.615850e-47 |
| Msa0243930 | Msa1338520 | 0.810652 | 1.036225e-50 | -8.615850e-47 |
| Msa0243930 | Msa1344010 | 0.815063 | 1.119731e-51 | -8.615850e-47 |
| Msa0243930 | Msa1371080 | -0.825737 | 3.982313e-54 | -8.615850e-47 |
| Msa0243930 | Msa1376890 | 0.820674 | 6.053305e-53 | -8.615850e-47 |
| Msa0243930 | Msa1381940 | 0.810470 | 1.134531e-50 | -8.615850e-47 |
| Msa0243930 | Msa1441200 | 0.802247 | 6.141838e-49 | -8.615850e-47 |
| Msa0243930 | Msa1445250 | 0.816003 | 6.917019e-52 | -8.615850e-47 |
| Msa0243930 | Msa1447440 | 0.815430 | 9.280591e-52 | -8.615850e-47 |
| Msa0243930 | Msa1454000 | 0.829478 | 5.033720e-55 | -8.615850e-47 |
| Msa0243930 | Msa1454290 | -0.810335 | 1.212899e-50 | -8.615850e-47 |
| Msa0243930 | Msa1460410 | 0.803355 | 3.626884e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243930 | MtrunA17_Chr2g0297701 | 91.767 | 583 | 17 | 1 | 4 | 555 | 2 | 584 | 0.0 | 1087 |
| Msa0243930 | MtrunA17_Chr2g0297691 | 50.853 | 586 | 245 | 6 | 11 | 554 | 121 | 705 | 0.0 | 593 |
| Msa0243930 | MtrunA17_Chr2g0297681 | 49.057 | 583 | 251 | 6 | 13 | 554 | 126 | 703 | 0.0 | 568 |
| Msa0243930 | MtrunA17_Chr2g0297711 | 50.909 | 550 | 244 | 6 | 11 | 555 | 13 | 541 | 0.0 | 554 |
| Msa0243930 | MtrunA17_Chr2g0297651 | 48.746 | 558 | 247 | 3 | 35 | 554 | 148 | 704 | 0.0 | 550 |
| Msa0243930 | MtrunA17_Chr2g0297481 | 49.695 | 491 | 202 | 5 | 103 | 554 | 1 | 485 | 6.71e-165 | 478 |
| Msa0243930 | MtrunA17_Chr2g0297491 | 55.523 | 344 | 149 | 2 | 214 | 554 | 49 | 391 | 6.47e-131 | 387 |
| Msa0243930 | MtrunA17_Chr5g0410201 | 39.820 | 334 | 188 | 5 | 215 | 542 | 1 | 327 | 6.65e-74 | 238 |
| Msa0243930 | MtrunA17_Chr5g0410271 | 41.424 | 309 | 168 | 5 | 243 | 543 | 24 | 327 | 4.39e-71 | 231 |
| Msa0243930 | MtrunA17_Chr5g0410171 | 38.838 | 327 | 187 | 5 | 222 | 542 | 414 | 733 | 2.34e-68 | 234 |
| Msa0243930 | MtrunA17_Chr6g0456141 | 38.053 | 339 | 188 | 5 | 219 | 539 | 46 | 380 | 1.10e-66 | 221 |
| Msa0243930 | MtrunA17_Chr5g0410371 | 40.753 | 292 | 170 | 2 | 253 | 541 | 4 | 295 | 1.50e-63 | 210 |
| Msa0243930 | MtrunA17_Chr5g0410461 | 40.446 | 314 | 172 | 4 | 234 | 541 | 159 | 463 | 1.10e-61 | 210 |
| Msa0243930 | MtrunA17_Chr5g0410341 | 38.065 | 310 | 179 | 5 | 243 | 544 | 443 | 747 | 2.78e-61 | 215 |
| Msa0243930 | MtrunA17_Chr5g0410341 | 28.922 | 204 | 122 | 8 | 44 | 225 | 117 | 319 | 4.33e-12 | 68.9 |
| Msa0243930 | MtrunA17_Chr6g0456101 | 40.864 | 301 | 175 | 3 | 253 | 553 | 453 | 750 | 3.63e-60 | 212 |
| Msa0243930 | MtrunA17_Chr5g0443001 | 37.500 | 328 | 200 | 4 | 215 | 541 | 279 | 602 | 1.27e-59 | 208 |
| Msa0243930 | MtrunA17_Chr5g0443001 | 30.769 | 169 | 107 | 3 | 49 | 209 | 33 | 199 | 3.75e-11 | 65.9 |
| Msa0243930 | MtrunA17_Chr6g0457101 | 38.235 | 306 | 180 | 4 | 253 | 555 | 400 | 699 | 1.29e-58 | 207 |
| Msa0243930 | MtrunA17_Chr1g0211541 | 28.516 | 519 | 339 | 8 | 53 | 548 | 2 | 511 | 1.74e-54 | 192 |
| Msa0243930 | MtrunA17_Chr3g0100301 | 31.754 | 422 | 258 | 10 | 128 | 537 | 4 | 407 | 3.71e-52 | 183 |
| Msa0243930 | MtrunA17_Chr5g0410581 | 36.634 | 303 | 185 | 4 | 243 | 538 | 490 | 792 | 7.23e-52 | 189 |
| Msa0243930 | MtrunA17_Chr2g0297631 | 42.932 | 191 | 109 | 0 | 37 | 227 | 155 | 345 | 1.30e-51 | 189 |
| Msa0243930 | MtrunA17_Chr1g0211531 | 27.976 | 504 | 331 | 11 | 46 | 524 | 21 | 517 | 5.65e-48 | 175 |
| Msa0243930 | MtrunA17_Chr2g0286601 | 33.871 | 310 | 199 | 3 | 229 | 536 | 370 | 675 | 1.30e-47 | 176 |
| Msa0243930 | MtrunA17_Chr2g0286601 | 30.675 | 163 | 102 | 3 | 50 | 202 | 9 | 170 | 6.68e-13 | 71.6 |
| Msa0243930 | MtrunA17_Chr3g0098481 | 34.708 | 291 | 183 | 4 | 253 | 537 | 39 | 328 | 3.26e-47 | 168 |
| Msa0243930 | MtrunA17_Chr5g0410191 | 42.857 | 189 | 107 | 1 | 351 | 539 | 2 | 189 | 5.36e-45 | 157 |
| Msa0243930 | MtrunA17_Chr2g0286551 | 34.667 | 300 | 184 | 4 | 251 | 548 | 371 | 660 | 4.53e-43 | 163 |
| Msa0243930 | MtrunA17_Chr2g0286551 | 29.570 | 186 | 122 | 2 | 50 | 226 | 9 | 194 | 3.37e-13 | 72.4 |
| Msa0243930 | MtrunA17_Chr3g0102001 | 34.106 | 302 | 189 | 3 | 245 | 539 | 436 | 734 | 4.04e-42 | 161 |
| Msa0243930 | MtrunA17_Chr5g0439061 | 36.082 | 291 | 181 | 3 | 251 | 537 | 438 | 727 | 3.75e-41 | 158 |
| Msa0243930 | MtrunA17_Chr3g0100741 | 30.744 | 309 | 209 | 4 | 215 | 522 | 274 | 578 | 3.86e-40 | 154 |
| Msa0243930 | MtrunA17_Chr3g0100741 | 30.588 | 170 | 108 | 3 | 48 | 209 | 34 | 201 | 1.72e-13 | 73.2 |
| Msa0243930 | MtrunA17_Chr2g0284501 | 34.667 | 300 | 186 | 5 | 235 | 533 | 357 | 647 | 2.18e-39 | 152 |
| Msa0243930 | MtrunA17_Chr5g0410451 | 45.752 | 153 | 83 | 0 | 346 | 498 | 36 | 188 | 1.60e-37 | 139 |
| Msa0243930 | MtrunA17_Chr3g0098531 | 30.466 | 279 | 188 | 4 | 264 | 537 | 3 | 280 | 2.18e-37 | 140 |
| Msa0243930 | MtrunA17_Chr3g0096941 | 29.430 | 316 | 213 | 5 | 213 | 522 | 268 | 579 | 5.44e-37 | 145 |
| Msa0243930 | MtrunA17_Chr3g0096941 | 31.765 | 170 | 106 | 3 | 48 | 209 | 34 | 201 | 2.25e-15 | 79.3 |
| Msa0243930 | MtrunA17_Chr5g0410541 | 47.297 | 148 | 77 | 1 | 351 | 498 | 23 | 169 | 4.19e-36 | 134 |
| Msa0243930 | MtrunA17_Chr2g0284541 | 35.211 | 284 | 175 | 5 | 251 | 533 | 354 | 629 | 4.32e-36 | 143 |
| Msa0243930 | MtrunA17_Chr2g0297531 | 34.653 | 202 | 95 | 2 | 103 | 267 | 1 | 202 | 1.26e-34 | 129 |
| Msa0243930 | MtrunA17_Chr2g0286561 | 36.735 | 196 | 124 | 0 | 341 | 536 | 5 | 200 | 1.29e-34 | 130 |
| Msa0243930 | MtrunA17_Chr3g0098301 | 29.310 | 290 | 198 | 4 | 253 | 536 | 105 | 393 | 1.98e-31 | 126 |
| Msa0243930 | MtrunA17_Chr2g0297611 | 54.945 | 91 | 40 | 1 | 357 | 447 | 1 | 90 | 5.00e-29 | 110 |
| Msa0243930 | MtrunA17_Chr5g0410511 | 35.294 | 187 | 114 | 3 | 351 | 530 | 2 | 188 | 6.91e-29 | 114 |
| Msa0243930 | MtrunA17_Chr5g0439081 | 33.171 | 205 | 128 | 3 | 351 | 554 | 15 | 211 | 1.06e-28 | 113 |
| Msa0243930 | MtrunA17_Chr2g0297521 | 60.465 | 86 | 33 | 1 | 343 | 428 | 1 | 85 | 2.83e-28 | 108 |
| Msa0243930 | MtrunA17_Chr5g0439051 | 39.474 | 190 | 113 | 2 | 351 | 539 | 19 | 207 | 2.04e-27 | 110 |
| Msa0243930 | MtrunA17_Chr2g0297621 | 40.984 | 122 | 69 | 2 | 215 | 333 | 1 | 122 | 3.47e-24 | 97.8 |
| Msa0243930 | MtrunA17_Chr5g0410181 | 40.299 | 134 | 71 | 3 | 410 | 539 | 2 | 130 | 6.56e-23 | 94.7 |
| Msa0243930 | MtrunA17_Chr2g0297501 | 41.935 | 93 | 54 | 0 | 103 | 195 | 1 | 93 | 1.13e-22 | 92.8 |
| Msa0243930 | MtrunA17_Chr1g0211511 | 30.660 | 212 | 139 | 3 | 253 | 461 | 20 | 226 | 2.35e-21 | 95.5 |
| Msa0243930 | MtrunA17_Chr5g0410291 | 30.636 | 173 | 106 | 7 | 66 | 225 | 1 | 172 | 2.29e-13 | 69.3 |
| Msa0243930 | MtrunA17_Chr3g0100921 | 34.677 | 124 | 81 | 0 | 399 | 522 | 1 | 124 | 1.65e-12 | 65.1 |
| Msa0243930 | MtrunA17_Chr3g0100941 | 36.449 | 107 | 68 | 0 | 48 | 154 | 34 | 140 | 4.73e-12 | 65.1 |
| Msa0243930 | MtrunA17_Chr4g0030551 | 22.038 | 422 | 273 | 12 | 48 | 446 | 33 | 421 | 8.61e-12 | 67.8 |
| Msa0243930 | MtrunA17_Chr2g0286571 | 28.877 | 187 | 122 | 3 | 50 | 226 | 9 | 194 | 4.09e-11 | 64.7 |
| Msa0243930 | MtrunA17_Chr1g0212971 | 21.165 | 515 | 334 | 16 | 62 | 526 | 53 | 545 | 9.36e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243930 | AT3G18670.1 | 32.841 | 542 | 317 | 10 | 57 | 555 | 60 | 597 | 1.18e-91 | 293 |
| Msa0243930 | AT5G35810.1 | 43.582 | 335 | 183 | 2 | 223 | 551 | 8 | 342 | 1.68e-85 | 269 |
| Msa0243930 | AT3G18670.2 | 40.645 | 310 | 181 | 3 | 247 | 555 | 345 | 652 | 4.49e-71 | 240 |
| Msa0243930 | AT3G18670.2 | 25.698 | 179 | 121 | 3 | 57 | 223 | 60 | 238 | 1.95e-12 | 70.5 |
| Msa0243930 | AT5G04690.1 | 30.784 | 510 | 302 | 10 | 79 | 541 | 107 | 612 | 5.83e-61 | 213 |
| Msa0243930 | AT5G04730.1 | 39.867 | 301 | 177 | 3 | 253 | 551 | 301 | 599 | 2.89e-59 | 207 |
| Msa0243930 | AT5G04700.1 | 38.509 | 322 | 193 | 3 | 222 | 541 | 338 | 656 | 1.09e-57 | 204 |
| Msa0243930 | AT3G54065.1 | 46.753 | 231 | 117 | 1 | 331 | 555 | 2 | 232 | 2.52e-56 | 189 |
| Msa0243930 | AT5G04690.3 | 35.826 | 321 | 198 | 4 | 222 | 541 | 319 | 632 | 1.61e-52 | 190 |
| Msa0243930 | AT5G04690.2 | 35.826 | 321 | 198 | 4 | 222 | 541 | 333 | 646 | 1.84e-52 | 190 |
| Msa0243930 | AT5G04680.2 | 36.556 | 331 | 195 | 5 | 222 | 541 | 202 | 528 | 4.79e-52 | 186 |
| Msa0243930 | AT5G04680.4 | 36.556 | 331 | 195 | 5 | 222 | 541 | 325 | 651 | 3.13e-51 | 186 |
| Msa0243930 | AT5G04680.3 | 36.556 | 331 | 195 | 5 | 222 | 541 | 311 | 637 | 3.35e-51 | 186 |
| Msa0243930 | AT5G04680.1 | 36.556 | 331 | 195 | 5 | 222 | 541 | 354 | 680 | 5.72e-51 | 186 |
| Msa0243930 | AT5G35830.1 | 38.342 | 193 | 112 | 4 | 48 | 238 | 89 | 276 | 4.07e-30 | 119 |
| Msa0243930 | AT3G54070.1 | 37.037 | 162 | 97 | 2 | 50 | 206 | 54 | 215 | 3.47e-25 | 105 |
| Msa0243930 | AT3G12360.1 | 19.961 | 516 | 334 | 13 | 40 | 518 | 62 | 535 | 1.54e-14 | 77.0 |
| Msa0243930 | AT3G12360.2 | 19.961 | 516 | 334 | 13 | 40 | 518 | 50 | 523 | 1.81e-14 | 76.6 |
| Msa0243930 | AT4G03470.1 | 23.359 | 518 | 326 | 19 | 50 | 519 | 123 | 617 | 4.04e-14 | 75.9 |
| Msa0243930 | AT5G02620.4 | 24.067 | 536 | 292 | 21 | 37 | 519 | 2 | 475 | 9.09e-13 | 71.2 |
| Msa0243930 | AT5G02620.1 | 24.067 | 536 | 292 | 21 | 37 | 519 | 2 | 475 | 9.09e-13 | 71.2 |
| Msa0243930 | AT5G02620.3 | 24.067 | 536 | 292 | 21 | 37 | 519 | 2 | 475 | 9.09e-13 | 71.2 |
| Msa0243930 | AT3G09550.2 | 21.937 | 506 | 302 | 17 | 40 | 501 | 83 | 539 | 1.05e-11 | 68.2 |
| Msa0243930 | AT3G09550.1 | 21.937 | 506 | 302 | 17 | 40 | 501 | 76 | 532 | 1.14e-11 | 67.8 |
| Msa0243930 | AT3G09550.3 | 21.937 | 506 | 302 | 17 | 40 | 501 | 76 | 532 | 1.14e-11 | 67.8 |
Find 120 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAATTGTTGCCATCAATT+AGG | 0.141175 | 2_2:-21693988 | Msa0243930:CDS |
| TGTATAGACTCGGGACTTTA+TGG | 0.176518 | 2_2:-21693839 | Msa0243930:intron |
| TCGAGTATTTCTTTACATTT+AGG | 0.190510 | 2_2:+21693893 | None:intergenic |
| ATTACAGATGAAAGGTTAAT+TGG | 0.204447 | 2_2:-21697148 | Msa0243930:intron |
| TCTTTGAAAGATTGCATAAA+TGG | 0.218928 | 2_2:-21692988 | Msa0243930:CDS |
| TTCACTGACAAGAATGAATT+TGG | 0.225054 | 2_2:-21697996 | Msa0243930:five_prime_UTR |
| GCTGGTTTATCTAAATAATT+AGG | 0.228180 | 2_2:+21692533 | None:intergenic |
| TGAATTGTTGCCATCAATTA+GGG | 0.230010 | 2_2:-21693987 | Msa0243930:CDS |
| CATTAACGTTACCATGAAAT+AGG | 0.243274 | 2_2:+21692052 | None:intergenic |
| CTGAGTTCCCATAACAAATT+AGG | 0.270857 | 2_2:+21693090 | None:intergenic |
| ACATTTGTAGTTCTTTATTC+AGG | 0.282598 | 2_2:-21692190 | Msa0243930:CDS |
| TTGCAGAGAAATGGCTTTAG+AGG | 0.299985 | 2_2:-21695221 | Msa0243930:intron |
| CATATTATCATGGTTTGAAA+TGG | 0.303488 | 2_2:-21692307 | Msa0243930:CDS |
| TCAATTTGATACATGAAATA+AGG | 0.310703 | 2_2:-21693011 | Msa0243930:CDS |
| CACTTATCCTAATTTGTTAT+GGG | 0.313348 | 2_2:-21693097 | Msa0243930:CDS |
| GCACTTATCCTAATTTGTTA+TGG | 0.313386 | 2_2:-21693098 | Msa0243930:CDS |
| GCAAGAACAGAAATAAAATT+AGG | 0.316156 | 2_2:+21692281 | None:intergenic |
| TTGCCTTTGAAGTTGATATC+TGG | 0.316818 | 2_2:-21692395 | Msa0243930:CDS |
| ACTAATGGATCGTGATGATT+TGG | 0.321117 | 2_2:-21694098 | Msa0243930:CDS |
| GATTTGCTCCCGCTGCAATA+TGG | 0.321893 | 2_2:+21694149 | None:intergenic |
| TTGCTTCAGCTCAGTTTAGA+AGG | 0.323720 | 2_2:-21695165 | Msa0243930:CDS |
| CTTCACAAAGCAGCACTAAA+AGG | 0.335945 | 2_2:-21694256 | Msa0243930:CDS |
| GTCCAGTCCAAGTGAAATAA+TGG | 0.337051 | 2_2:+21698042 | None:intergenic |
| CCTTGCAGCAGGGTGATTGA+TGG | 0.338093 | 2_2:+21697956 | None:intergenic |
| CAACTCTATGCAATGGTTGC+TGG | 0.340691 | 2_2:+21695185 | None:intergenic |
| CAGGAAAGAGAGAAGACTTT+TGG | 0.346854 | 2_2:+21698076 | None:intergenic |
| TAATTGGAGTGGACCACTTT+TGG | 0.350804 | 2_2:-21697132 | Msa0243930:five_prime_UTR |
| CAATGGTTGCTGGCTAGATT+TGG | 0.352758 | 2_2:+21695195 | None:intergenic |
| TGTTCACTTTGTGGAGGAAT+TGG | 0.355332 | 2_2:-21694125 | Msa0243930:CDS |
| GAAGGGGAACACATTGGTTT+AGG | 0.361388 | 2_2:+21694275 | None:intergenic |
| CTTTGCTTTGCTGCAGCGGT+TGG | 0.373249 | 2_2:-21694046 | Msa0243930:CDS |
| AGGTGTTACTCCTCTTTACT+TGG | 0.381248 | 2_2:-21693957 | Msa0243930:CDS |
| TTGTTTCCTTTGCAGAGAAA+TGG | 0.387889 | 2_2:-21695230 | Msa0243930:intron |
| GGAGGAATTGGTAAAACTAA+TGG | 0.390049 | 2_2:-21694113 | Msa0243930:CDS |
| AAGGCATTGTGCCTATTTCA+TGG | 0.391796 | 2_2:-21692063 | Msa0243930:three_prime_UTR |
| TTAAGCTTATACGACGCATC+TGG | 0.395130 | 2_2:-21693236 | Msa0243930:CDS |
| GGTTGCCCAGCCATTTGTTA+TGG | 0.404362 | 2_2:+21694177 | None:intergenic |
| CCTAGTCCACCCCTAATTGA+TGG | 0.425519 | 2_2:+21693977 | None:intergenic |
| TGTTCAACTTGCTGAGATAA+TGG | 0.428263 | 2_2:-21694020 | Msa0243930:CDS |
| ACCCATTATTTCACTTGGAC+TGG | 0.432024 | 2_2:-21698044 | Msa0243930:five_prime_UTR |
| TGGCAGAAATCAGCAATGTT+TGG | 0.432764 | 2_2:+21694197 | None:intergenic |
| CCATCAATTAGGGGTGGACT+AGG | 0.433460 | 2_2:-21693977 | Msa0243930:CDS |
| TAGCGAATCATACGTTTACT+TGG | 0.435226 | 2_2:+21692167 | None:intergenic |
| AAATGATGCTCGAATTATCA+TGG | 0.437423 | 2_2:-21692873 | Msa0243930:CDS |
| ATATTATCATGGTTTGAAAT+GGG | 0.443778 | 2_2:-21692306 | Msa0243930:CDS |
| TGCTCTTTGCTTTGCTGCAG+CGG | 0.445188 | 2_2:-21694050 | Msa0243930:CDS |
| ACAATTATCGCCGCAGAAGT+TGG | 0.445753 | 2_2:-21693150 | Msa0243930:CDS |
| CTAAAAGGTGATTGGAAAGA+AGG | 0.452948 | 2_2:-21694241 | Msa0243930:CDS |
| GCGATAATTGTTACTTGAGA+TGG | 0.457167 | 2_2:+21693162 | None:intergenic |
| TTCTACATAACATATTATCA+TGG | 0.459801 | 2_2:-21692317 | Msa0243930:CDS |
| AAGCAGCACTAAAAGGTGAT+TGG | 0.463773 | 2_2:-21694249 | Msa0243930:CDS |
| GTTTCGACTCTCATAGCTAC+AGG | 0.467654 | 2_2:-21692611 | Msa0243930:CDS |
| CTGATTTCTGCCATAACAAA+TGG | 0.468918 | 2_2:-21694187 | Msa0243930:CDS |
| TCAGAAATTCTCCTTGCAGC+AGG | 0.478428 | 2_2:+21697945 | None:intergenic |
| GCAAACAGCGAATTCTTGTA+TGG | 0.482111 | 2_2:-21692636 | Msa0243930:CDS |
| CCTTGAGTCTCAACCAAAAG+TGG | 0.485968 | 2_2:+21697119 | None:intergenic |
| TCTAGATGACTCAGAGATGA+TGG | 0.487397 | 2_2:-21693199 | Msa0243930:CDS |
| CATGCAGAATTGCTTAAAAG+AGG | 0.494198 | 2_2:-21692674 | Msa0243930:CDS |
| TCCAGTCCAAGTGAAATAAT+GGG | 0.496369 | 2_2:+21698043 | None:intergenic |
| GATCGACTCAATATAGTCTC+TGG | 0.497757 | 2_2:-21692907 | Msa0243930:CDS |
| GCTCCGCATATCGCGAGATA+AGG | 0.498008 | 2_2:+21692435 | None:intergenic |
| TTTCTGCCATAACAAATGGC+TGG | 0.499899 | 2_2:-21694183 | Msa0243930:CDS |
| AGCAAATCATGTTCACTTTG+TGG | 0.500460 | 2_2:-21694134 | Msa0243930:CDS |
| GAGACTATATTGAGTCGATC+AGG | 0.500975 | 2_2:+21692910 | None:intergenic |
| AAAGCAAATACGAGGAATGC+TGG | 0.502490 | 2_2:+21692515 | None:intergenic |
| TGCATTACATTACAGATGAA+AGG | 0.502566 | 2_2:-21697156 | Msa0243930:intron |
| ACCGCACTCCATATTGCAGC+GGG | 0.502589 | 2_2:-21694157 | Msa0243930:CDS |
| GCTCGAATTATCATGGTTTG+AGG | 0.512843 | 2_2:-21692866 | Msa0243930:intron |
| GAATAAAGAACTACAAATGT+AGG | 0.513663 | 2_2:+21692193 | None:intergenic |
| GTGTTATCGTTGTTTCCACC+TGG | 0.514607 | 2_2:+21692563 | None:intergenic |
| TTTGGAATTGCAAGATTACT+CGG | 0.515584 | 2_2:-21694080 | Msa0243930:CDS |
| TGTAAAGCAGCCAAGTAAAG+AGG | 0.523502 | 2_2:+21693947 | None:intergenic |
| TATCTCGCGATATGCGGAGC+AGG | 0.523661 | 2_2:-21692432 | Msa0243930:CDS |
| TTTGAAGTTGATATCTGGAC+TGG | 0.528876 | 2_2:-21692390 | Msa0243930:CDS |
| TAGTCACCCATTATTTCACT+TGG | 0.529267 | 2_2:-21698049 | Msa0243930:five_prime_UTR |
| TTCTGCCATAACAAATGGCT+GGG | 0.532460 | 2_2:-21694182 | Msa0243930:CDS |
| TCAGCTGCATTTAGTATACC+AGG | 0.540223 | 2_2:-21692581 | Msa0243930:CDS |
| ATTTGCTTTATCCGACTCCA+TGG | 0.541197 | 2_2:-21692501 | Msa0243930:CDS |
| TTTAGTGCTGCTTTGTGAAG+GGG | 0.544540 | 2_2:+21694259 | None:intergenic |
| CTTTGTGAAGGGGAACACAT+TGG | 0.546773 | 2_2:+21694269 | None:intergenic |
| AATAATGGGTGACTATGTAC+AGG | 0.551332 | 2_2:+21698057 | None:intergenic |
| TTGGAATTGCAAGATTACTC+GGG | 0.553192 | 2_2:-21694079 | Msa0243930:CDS |
| AGATGAAAGGTTAATTGGAG+TGG | 0.553861 | 2_2:-21697143 | Msa0243930:five_prime_UTR |
| CTCAAAATTTCCAACTTCTG+CGG | 0.567720 | 2_2:+21693140 | None:intergenic |
| GCTTACTAGTAGAAACTAAG+TGG | 0.569804 | 2_2:+21695134 | None:intergenic |
| AAATACTCGAGGAAAACGAT+TGG | 0.569851 | 2_2:-21693880 | Msa0243930:CDS |
| CAGAAATTCTCCTTGCAGCA+GGG | 0.573958 | 2_2:+21697946 | None:intergenic |
| CGTCGTATAAGCTTAAGCAT+TGG | 0.578723 | 2_2:+21693243 | None:intergenic |
| CGAGATAAGTGCCATGGAGT+CGG | 0.585094 | 2_2:+21692490 | None:intergenic |
| CGCATATCGCGAGATAAGGA+TGG | 0.586729 | 2_2:+21692439 | None:intergenic |
| GTTCCTCACTTGTATAGACT+CGG | 0.588161 | 2_2:-21693849 | Msa0243930:CDS |
| CCATCAATCACCCTGCTGCA+AGG | 0.589924 | 2_2:-21697956 | Msa0243930:five_prime_UTR |
| CATCCTTATCTCGCGATATG+CGG | 0.590914 | 2_2:-21692438 | Msa0243930:CDS |
| GTTATGGGAACTCAGTAACA+AGG | 0.591126 | 2_2:-21693082 | Msa0243930:CDS |
| AAGCAAACAGTGAGATGGCA+TGG | 0.593244 | 2_2:-21693925 | Msa0243930:CDS |
| AGACATATAAACAACGGTAT+CGG | 0.594156 | 2_2:+21692251 | None:intergenic |
| TAAGCTTATACGACGCATCT+GGG | 0.601299 | 2_2:-21693235 | Msa0243930:CDS |
| AGTCCAGATATCAACTTCAA+AGG | 0.602472 | 2_2:+21692392 | None:intergenic |
| TGCTTAAAAGAGGAGAGTCA+TGG | 0.608639 | 2_2:-21692664 | Msa0243930:CDS |
| TCAAATTGAAGATACTAGCA+TGG | 0.613242 | 2_2:+21693025 | None:intergenic |
| TGAAGACGAGATAAGTGCCA+TGG | 0.615834 | 2_2:+21692484 | None:intergenic |
| TTGTTGCCATCAATTAGGGG+TGG | 0.620541 | 2_2:-21693983 | Msa0243930:CDS |
| AAATCATGTTCACTTTGTGG+AGG | 0.623673 | 2_2:-21694131 | Msa0243930:CDS |
| AACCGCACTCCATATTGCAG+CGG | 0.625156 | 2_2:-21694158 | Msa0243930:CDS |
| GTAGAAACTAAGTGGATGAG+AGG | 0.636695 | 2_2:+21695142 | None:intergenic |
| TTCCTCACTTGTATAGACTC+GGG | 0.637197 | 2_2:-21693848 | Msa0243930:CDS |
| ACTATATTGAGTCGATCAGG+TGG | 0.641004 | 2_2:+21692913 | None:intergenic |
| GAAGTTGATATCTGGACTGG+TGG | 0.641728 | 2_2:-21692387 | Msa0243930:CDS |
| TTTACAAGCAAACAGTGAGA+TGG | 0.653503 | 2_2:-21693930 | Msa0243930:CDS |
| TTATGGGAACTCAGTAACAA+GGG | 0.656955 | 2_2:-21693081 | Msa0243930:CDS |
| AACTGTAGACATATAAACAA+CGG | 0.659566 | 2_2:+21692245 | None:intergenic |
| GTCCCGAGTCTATACAAGTG+AGG | 0.666679 | 2_2:+21693846 | None:intergenic |
| GAATTGTTGCCATCAATTAG+GGG | 0.669322 | 2_2:-21693986 | Msa0243930:CDS |
| GCTGAAGCAACTCTATGCAA+TGG | 0.680846 | 2_2:+21695178 | None:intergenic |
| TAAATGTAAAGAAATACTCG+AGG | 0.687289 | 2_2:-21693891 | Msa0243930:CDS |
| GCTGCATTTAGTATACCAGG+TGG | 0.691177 | 2_2:-21692578 | Msa0243930:CDS |
| TCTTTCGTAAATAGTTCGCG+AGG | 0.694354 | 2_2:+21692698 | None:intergenic |
| TCCCGCTGCAATATGGAGTG+CGG | 0.708642 | 2_2:+21694156 | None:intergenic |
| AGTCGGATAAAGCAAATACG+AGG | 0.727881 | 2_2:+21692507 | None:intergenic |
| AATTGAAGATACTAGCATGG+CGG | 0.757307 | 2_2:+21693028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAATATATTTTTTTAA+TGG | + | chr2_2:21692713-21692732 | None:intergenic | 0.0% |
| !!! | AATATATTTTTTTAATGGTT+TGG | + | chr2_2:21692708-21692727 | None:intergenic | 10.0% |
| !!! | AATATATTATATTCCTTTTT+TGG | - | chr2_2:21692720-21692739 | Msa0243930:CDS | 10.0% |
| !!! | TATTTGTATAGTATATTTTT+TGG | + | chr2_2:21693152-21693171 | None:intergenic | 10.0% |
| !! | AAATATCATGATAATAAATA+AGG | + | chr2_2:21693649-21693668 | None:intergenic | 10.0% |
| !!! | AGTTATGTTTTATTTTTAAA+TGG | - | chr2_2:21694576-21694595 | Msa0243930:intron | 10.0% |
| !!! | TTAATTGCAAATTTTTTTAA+GGG | + | chr2_2:21694668-21694687 | None:intergenic | 10.0% |
| !!! | ATTAATTGCAAATTTTTTTA+AGG | + | chr2_2:21694669-21694688 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTAAAGATAC+TGG | - | chr2_2:21694835-21694854 | Msa0243930:intron | 10.0% |
| !!! | TTTATTTTTCTGATATAAAA+TGG | - | chr2_2:21695067-21695086 | Msa0243930:intron | 10.0% |
| !!! | TTTCTTTTTCTTCATTTTTT+TGG | - | chr2_2:21692654-21692673 | Msa0243930:CDS | 15.0% |
| !!! | TTCTTTTTCTTCATTTTTTT+GGG | - | chr2_2:21692655-21692674 | Msa0243930:CDS | 15.0% |
| !! | GTTATAAAAGATAATGAAAA+TGG | + | chr2_2:21693091-21693110 | None:intergenic | 15.0% |
| !!! | TAAAATATTTTCAGTCTAAT+GGG | - | chr2_2:21694113-21694132 | Msa0243930:CDS | 15.0% |
| !! | TATTATAAACTACAATATTG+TGG | + | chr2_2:21694322-21694341 | None:intergenic | 15.0% |
| !!! | AGATATGTTTTGTTTTATTA+AGG | - | chr2_2:21694552-21694571 | Msa0243930:intron | 15.0% |
| !!! | GATATGTTTTGTTTTATTAA+GGG | - | chr2_2:21694553-21694572 | Msa0243930:intron | 15.0% |
| !!! | TAATTGCAAATTTTTTTAAG+GGG | + | chr2_2:21694667-21694686 | None:intergenic | 15.0% |
| !!! | TTTTAACTTACAATGAAAAT+AGG | - | chr2_2:21694717-21694736 | Msa0243930:intron | 15.0% |
| !! | TGAAAATATTTAATATCTTC+CGG | + | chr2_2:21695134-21695153 | None:intergenic | 15.0% |
| !!! | AAGATATTAAATATTTTCAG+TGG | - | chr2_2:21695135-21695154 | Msa0243930:intron | 15.0% |
| !!! | ATTTTTTTAAGAAATCATCT+TGG | + | chr2_2:21695304-21695323 | None:intergenic | 15.0% |
| !! | AGATGATTTCTTAAAAAAAT+AGG | - | chr2_2:21695304-21695323 | Msa0243930:intron | 15.0% |
| !!! | TTATTTTCTACATACTAAAT+TGG | + | chr2_2:21695467-21695486 | None:intergenic | 15.0% |
| !! | AATTTAGTATGTAGAAAATA+AGG | - | chr2_2:21695466-21695485 | Msa0243930:intron | 15.0% |
| !! | ATTTAGTATGTAGAAAATAA+GGG | - | chr2_2:21695467-21695486 | Msa0243930:intron | 15.0% |
| !! | AAATATTATCCAACATAATT+TGG | - | chr2_2:21696397-21696416 | Msa0243930:intron | 15.0% |
| !! | GTAATATTAATTAAACATTC+AGG | - | chr2_2:21696825-21696844 | Msa0243930:intron | 15.0% |
| !!! | TCTAATTGTTTTTAAATCTA+AGG | - | chr2_2:21698022-21698041 | Msa0243930:five_prime_UTR | 15.0% |
| !! | ACATAAATTCCTACTAAATA+TGG | + | chr2_2:21692599-21692618 | None:intergenic | 20.0% |
| !! | GAATTTATGTTATGAATGAT+TGG | - | chr2_2:21692609-21692628 | Msa0243930:CDS | 20.0% |
| !!! | TTCATTATCTTTTATAACAC+TGG | - | chr2_2:21693093-21693112 | Msa0243930:CDS | 20.0% |
| !! | ACTATACTCAAATTATTGTA+CGG | - | chr2_2:21693262-21693281 | Msa0243930:intron | 20.0% |
| !! | TAAATGTAGAAACTTAATCT+TGG | - | chr2_2:21693804-21693823 | Msa0243930:intron | 20.0% |
| !!! | CTAAAATATTTTCAGTCTAA+TGG | - | chr2_2:21694112-21694131 | Msa0243930:CDS | 20.0% |
| !! | TTATTAACCATCGTAAAATT+AGG | + | chr2_2:21694507-21694526 | None:intergenic | 20.0% |
| !! | TCAATTATGCTAATAAATGA+TGG | - | chr2_2:21694688-21694707 | Msa0243930:intron | 20.0% |
| !! | CAATTATGCTAATAAATGAT+GGG | - | chr2_2:21694689-21694708 | Msa0243930:intron | 20.0% |
| !! | TATTAAACTTGACTAATTAC+TGG | - | chr2_2:21694807-21694826 | Msa0243930:intron | 20.0% |
| !!! | TATTTGCCTAGATTTTAAAA+CGG | + | chr2_2:21695003-21695022 | None:intergenic | 20.0% |
| !! | ATTACATTAACCTAGAAAAA+AGG | - | chr2_2:21695107-21695126 | Msa0243930:intron | 20.0% |
| !! | GAAAATATTTAATATCTTCC+GGG | + | chr2_2:21695133-21695152 | None:intergenic | 20.0% |
| !! | AATATGTGTTAAACTTGAAA+TGG | - | chr2_2:21695274-21695293 | Msa0243930:intron | 20.0% |
| !! | ATATGTGTTAAACTTGAAAT+GGG | - | chr2_2:21695275-21695294 | Msa0243930:intron | 20.0% |
| !! | ATTTCTTAAAAAAATAGGCT+AGG | - | chr2_2:21695309-21695328 | Msa0243930:intron | 20.0% |
| !!! | ATATTTGTTTTTTCTCTAAC+AGG | - | chr2_2:21695699-21695718 | Msa0243930:intron | 20.0% |
| !!! | GTTATATTTCTTAATTTGTG+TGG | + | chr2_2:21696665-21696684 | None:intergenic | 20.0% |
| !! | TCAATTTGATACATGAAATA+AGG | - | chr2_2:21697093-21697112 | Msa0243930:exon | 20.0% |
| !!! | TTTTTCATTTCAATCATATG+TGG | + | chr2_2:21697370-21697389 | None:intergenic | 20.0% |
| !! | ATTGAAATGAAAAATTCTGA+AGG | - | chr2_2:21697376-21697395 | Msa0243930:intron | 20.0% |
| !! | TTCTACATAACATATTATCA+TGG | - | chr2_2:21697787-21697806 | Msa0243930:intron | 20.0% |
| !!! | ATATTATCATGGTTTGAAAT+GGG | - | chr2_2:21697798-21697817 | Msa0243930:intron | 20.0% |
| ! | AAACTTTATGCTGAAAATAG+AGG | - | chr2_2:21692506-21692525 | Msa0243930:CDS | 25.0% |
| ! | AGATCTTATCCATATTTAGT+AGG | - | chr2_2:21692587-21692606 | Msa0243930:CDS | 25.0% |
| ! | ATAAAAAACTCTGCCAAAAA+AGG | + | chr2_2:21692736-21692755 | None:intergenic | 25.0% |
| ! | ATTACAGATGAAAGGTTAAT+TGG | - | chr2_2:21692956-21692975 | Msa0243930:CDS | 25.0% |
| ! | TATGTAAGTATGCGAATTAT+TGG | - | chr2_2:21693031-21693050 | Msa0243930:CDS | 25.0% |
| ! | GGACAAAAGTAATATTAAAG+TGG | + | chr2_2:21693131-21693150 | None:intergenic | 25.0% |
| !! | AAATTATTGTACGGATGTTT+TGG | - | chr2_2:21693271-21693290 | Msa0243930:intron | 25.0% |
| ! | ACTCATGATACAAATTACAA+AGG | + | chr2_2:21693582-21693601 | None:intergenic | 25.0% |
| ! | TTTGTATCATGAGTATATGT+TGG | - | chr2_2:21693588-21693607 | Msa0243930:intron | 25.0% |
| ! | TTGTATCATGAGTATATGTT+GGG | - | chr2_2:21693589-21693608 | Msa0243930:intron | 25.0% |
| ! | ACAATATTTAATTAAGGGTC+TGG | - | chr2_2:21693747-21693766 | Msa0243930:intron | 25.0% |
| ! | TAAGAGATATGAAATACTAC+AGG | + | chr2_2:21694052-21694071 | None:intergenic | 25.0% |
| !!! | GAGTTGGTTTGAAAATTAAA+TGG | - | chr2_2:21694279-21694298 | Msa0243930:CDS | 25.0% |
| ! | TATAAACTACAATATTGTGG+AGG | + | chr2_2:21694319-21694338 | None:intergenic | 25.0% |
| ! | TAGTCTCTATGAAATAGAAA+TGG | - | chr2_2:21694394-21694413 | Msa0243930:intron | 25.0% |
| !!! | TACAAGAGGATTTCTTTTTT+AGG | - | chr2_2:21694421-21694440 | Msa0243930:intron | 25.0% |
| !!! | ACAAGAGGATTTCTTTTTTA+GGG | - | chr2_2:21694422-21694441 | Msa0243930:intron | 25.0% |
| !! | ACTTTAACCTAATTTTACGA+TGG | - | chr2_2:21694497-21694516 | Msa0243930:intron | 25.0% |
| !!! | ATTTGCCTAGATTTTAAAAC+GGG | + | chr2_2:21695002-21695021 | None:intergenic | 25.0% |
| ! | GATGCTTATACTATACAATT+TGG | + | chr2_2:21695340-21695359 | None:intergenic | 25.0% |
| !! | ATCTTAAAGATGATTTTGTG+AGG | + | chr2_2:21695385-21695404 | None:intergenic | 25.0% |
| ! | TAGAATCCATCTAACTATAT+CGG | + | chr2_2:21695504-21695523 | None:intergenic | 25.0% |
| ! | TCGAGTATTTCTTTACATTT+AGG | + | chr2_2:21696214-21696233 | None:intergenic | 25.0% |
| ! | TAAATGTAAAGAAATACTCG+AGG | - | chr2_2:21696213-21696232 | Msa0243930:intron | 25.0% |
| ! | CCATAATATCCAAATTATGT+TGG | + | chr2_2:21696409-21696428 | None:intergenic | 25.0% |
| ! | CCAACATAATTTGGATATTA+TGG | - | chr2_2:21696406-21696425 | Msa0243930:intron | 25.0% |
| ! | ATCTCATCTCTCAATATATT+AGG | + | chr2_2:21696745-21696764 | None:intergenic | 25.0% |
| !! | TCTTTGAAAGATTGCATAAA+TGG | - | chr2_2:21697116-21697135 | Msa0243930:five_prime_UTR | 25.0% |
| !! | GCTGGTTTATCTAAATAATT+AGG | + | chr2_2:21697574-21697593 | None:intergenic | 25.0% |
| ! | CATATTATCATGGTTTGAAA+TGG | - | chr2_2:21697797-21697816 | Msa0243930:intron | 25.0% |
| ! | GCAAGAACAGAAATAAAATT+AGG | + | chr2_2:21697826-21697845 | None:intergenic | 25.0% |
| ! | AACTGTAGACATATAAACAA+CGG | + | chr2_2:21697862-21697881 | None:intergenic | 25.0% |
| ! | GAATAAAGAACTACAAATGT+AGG | + | chr2_2:21697914-21697933 | None:intergenic | 25.0% |
| ! | ACATTTGTAGTTCTTTATTC+AGG | - | chr2_2:21697914-21697933 | Msa0243930:intron | 25.0% |
| TTCACTGACAAGAATGAATT+TGG | - | chr2_2:21692108-21692127 | Msa0243930:three_prime_UTR | 30.0% | |
| ! | TCTGAGCTAATTTTATGTTC+AGG | - | chr2_2:21692177-21692196 | Msa0243930:CDS | 30.0% |
| ! | TGTTTTGTGAAGAATCTTGT+TGG | - | chr2_2:21692279-21692298 | Msa0243930:CDS | 30.0% |
| !! | TGTTATGAATGATTGGTTTC+AGG | - | chr2_2:21692616-21692635 | Msa0243930:CDS | 30.0% |
| ! | GGTTTGGAGTTTACAATTAA+AGG | + | chr2_2:21692692-21692711 | None:intergenic | 30.0% |
| GAATATTCTATGGCTCTTAT+TGG | - | chr2_2:21692861-21692880 | Msa0243930:intron | 30.0% | |
| GTTGTGACTTATTATCATCA+TGG | + | chr2_2:21692903-21692922 | None:intergenic | 30.0% | |
| ATAAGTCACAACTAACCATT+TGG | - | chr2_2:21692911-21692930 | Msa0243930:CDS | 30.0% | |
| ATAAATAAGTGTCCACCAAA+TGG | + | chr2_2:21692929-21692948 | None:intergenic | 30.0% | |
| TGCATTACATTACAGATGAA+AGG | - | chr2_2:21692948-21692967 | Msa0243930:CDS | 30.0% | |
| TCTAAAAGTAAATTCTGCAG+TGG | + | chr2_2:21693068-21693087 | None:intergenic | 30.0% | |
| GGGTTAGAAATTATCTTGAT+AGG | - | chr2_2:21693609-21693628 | Msa0243930:intron | 30.0% | |
| !!! | TTTTTTATCTTGTGCCCTAA+AGG | + | chr2_2:21693783-21693802 | None:intergenic | 30.0% |
| ! | AATGCTAACTTGTGTCTTAA+GGG | + | chr2_2:21693871-21693890 | None:intergenic | 30.0% |
| ! | AAATGCTAACTTGTGTCTTA+AGG | + | chr2_2:21693872-21693891 | None:intergenic | 30.0% |
| AACATGATAAGATATGAAGC+TGG | + | chr2_2:21694002-21694021 | None:intergenic | 30.0% | |
| ! | AAGTGATTTGCCTTATATCT+CGG | - | chr2_2:21694084-21694103 | Msa0243930:CDS | 30.0% |
| !! | TTTAGAAGTACCGAGATATA+AGG | + | chr2_2:21694097-21694116 | None:intergenic | 30.0% |
| !! | ATTTTCCTCGAATTTTGAGT+TGG | - | chr2_2:21694263-21694282 | Msa0243930:CDS | 30.0% |
| ATAGAAATGGAGATTACAAG+AGG | - | chr2_2:21694407-21694426 | Msa0243930:intron | 30.0% | |
| TTGTAAGAATCCAAAAAACC+AGG | - | chr2_2:21694750-21694769 | Msa0243930:intron | 30.0% | |
| TGTAAGAATCCAAAAAACCA+GGG | - | chr2_2:21694751-21694770 | Msa0243930:intron | 30.0% | |
| !!! | CTTATTTATCCCTGGTTTTT+TGG | + | chr2_2:21694763-21694782 | None:intergenic | 30.0% |
| ! | AACATCTTCTTATTTATCCC+TGG | + | chr2_2:21694771-21694790 | None:intergenic | 30.0% |
| TTGCGTTATAAGTGACTTTA+TGG | - | chr2_2:21695251-21695270 | Msa0243930:intron | 30.0% | |
| !! | TTTCCTTTTAAAGAGTCTAC+CGG | - | chr2_2:21695533-21695552 | Msa0243930:intron | 30.0% |
| ATAGAATGTGTGAATTTCAC+CGG | + | chr2_2:21695555-21695574 | None:intergenic | 30.0% | |
| TATTCGATATATTTAGACGC+AGG | + | chr2_2:21695609-21695628 | None:intergenic | 30.0% | |
| TTCTATAAGTACGACTCAAA+TGG | + | chr2_2:21695648-21695667 | None:intergenic | 30.0% | |
| TCTGCAATGAAATTGATCAA+GGG | + | chr2_2:21695791-21695810 | None:intergenic | 30.0% | |
| TTGCAGAGGAACATAAAAAA+AGG | - | chr2_2:21695804-21695823 | Msa0243930:intron | 30.0% | |
| ! | TTTGGAATTGCAAGATTACT+CGG | - | chr2_2:21696024-21696043 | Msa0243930:intron | 30.0% |
| ATGAATTGTTGCCATCAATT+AGG | - | chr2_2:21696116-21696135 | Msa0243930:intron | 30.0% | |
| TGAATTGTTGCCATCAATTA+GGG | - | chr2_2:21696117-21696136 | Msa0243930:intron | 30.0% | |
| CTACTCTCTCTCAAATATAT+TGG | + | chr2_2:21696376-21696395 | None:intergenic | 30.0% | |
| ATGTGAACTTACATAAATGC+AGG | + | chr2_2:21696576-21696595 | None:intergenic | 30.0% | |
| !! | ATACCTCACTTTAAAACAGA+TGG | + | chr2_2:21696628-21696647 | None:intergenic | 30.0% |
| TCAAATTGAAGATACTAGCA+TGG | + | chr2_2:21697082-21697101 | None:intergenic | 30.0% | |
| ! | AGATTGCATAAATGGTTTTC+TGG | - | chr2_2:21697124-21697143 | Msa0243930:five_prime_UTR | 30.0% |
| ! | ATAAATGGTTTTCTGGATGA+TGG | - | chr2_2:21697131-21697150 | Msa0243930:five_prime_UTR | 30.0% |
| AAATGATGCTCGAATTATCA+TGG | - | chr2_2:21697231-21697250 | Msa0243930:intron | 30.0% | |
| AGACATATAAACAACGGTAT+CGG | + | chr2_2:21697856-21697875 | None:intergenic | 30.0% | |
| CATTAACGTTACCATGAAAT+AGG | + | chr2_2:21698055-21698074 | None:intergenic | 30.0% | |
| !! | AATAATGGGTGACTATGTAC+AGG | + | chr2_2:21692050-21692069 | None:intergenic | 35.0% |
| TAGTCACCCATTATTTCACT+TGG | - | chr2_2:21692055-21692074 | Msa0243930:three_prime_UTR | 35.0% | |
| TCCAGTCCAAGTGAAATAAT+GGG | + | chr2_2:21692064-21692083 | None:intergenic | 35.0% | |
| AACAGAAGATCCCTTTACTT+TGG | + | chr2_2:21692312-21692331 | None:intergenic | 35.0% | |
| CTATATATTAGCCAGATGAC+TGG | + | chr2_2:21692397-21692416 | None:intergenic | 35.0% | |
| !! | AATCACGTGCTTTTGAGAAA+GGG | + | chr2_2:21692841-21692860 | None:intergenic | 35.0% |
| GCACGTGATTGAATATTCTA+TGG | - | chr2_2:21692851-21692870 | Msa0243930:intron | 35.0% | |
| AGATGAAAGGTTAATTGGAG+TGG | - | chr2_2:21692961-21692980 | Msa0243930:CDS | 35.0% | |
| TTAGACTTTAGTGACTCATG+AGG | + | chr2_2:21693230-21693249 | None:intergenic | 35.0% | |
| ! | CACAAGTTGAGCTAAAAAGT+GGG | + | chr2_2:21693308-21693327 | None:intergenic | 35.0% |
| ! | TCACAAGTTGAGCTAAAAAG+TGG | + | chr2_2:21693309-21693328 | None:intergenic | 35.0% |
| !! | TCTGGTTAACTTGTACCTTT+AGG | - | chr2_2:21693765-21693784 | Msa0243930:intron | 35.0% |
| !! | CTGGTTAACTTGTACCTTTA+GGG | - | chr2_2:21693766-21693785 | Msa0243930:intron | 35.0% |
| AATACTACAGGTCTGTTTGA+TGG | + | chr2_2:21694040-21694059 | None:intergenic | 35.0% | |
| TCAAACCAACTCAAAATTCG+AGG | + | chr2_2:21694271-21694290 | None:intergenic | 35.0% | |
| TTGTTTCCTTTGCAGAGAAA+TGG | - | chr2_2:21694874-21694893 | Msa0243930:intron | 35.0% | |
| GCTTACTAGTAGAAACTAAG+TGG | + | chr2_2:21694973-21694992 | None:intergenic | 35.0% | |
| !!! | TCTGTCCCGTTTTAAAATCT+AGG | - | chr2_2:21694994-21695013 | Msa0243930:intron | 35.0% |
| ! | CATACAGAGTGCAACTTTTT+CGG | - | chr2_2:21695029-21695048 | Msa0243930:intron | 35.0% |
| ATTAACCTAGAAAAAAGGCC+CGG | - | chr2_2:21695112-21695131 | Msa0243930:intron | 35.0% | |
| AGTACGACTCAAATGGTAAA+AGG | + | chr2_2:21695641-21695660 | None:intergenic | 35.0% | |
| CTCTGCAATGAAATTGATCA+AGG | + | chr2_2:21695792-21695811 | None:intergenic | 35.0% | |
| CTTGATCAATTTCATTGCAG+AGG | - | chr2_2:21695790-21695809 | Msa0243930:intron | 35.0% | |
| !!! | TTTTAGTGCTGCTTTGTGAA+GGG | + | chr2_2:21695849-21695868 | None:intergenic | 35.0% |
| CTAAAAGGTGATTGGAAAGA+AGG | - | chr2_2:21695863-21695882 | Msa0243930:intron | 35.0% | |
| CTGATTTCTGCCATAACAAA+TGG | - | chr2_2:21695917-21695936 | Msa0243930:intron | 35.0% | |
| AGCAAATCATGTTCACTTTG+TGG | - | chr2_2:21695970-21695989 | Msa0243930:intron | 35.0% | |
| AAATCATGTTCACTTTGTGG+AGG | - | chr2_2:21695973-21695992 | Msa0243930:intron | 35.0% | |
| GGAGGAATTGGTAAAACTAA+TGG | - | chr2_2:21695991-21696010 | Msa0243930:intron | 35.0% | |
| ! | ACTAATGGATCGTGATGATT+TGG | - | chr2_2:21696006-21696025 | Msa0243930:intron | 35.0% |
| TTGGAATTGCAAGATTACTC+GGG | - | chr2_2:21696025-21696044 | Msa0243930:intron | 35.0% | |
| !! | TGTTCAACTTGCTGAGATAA+TGG | - | chr2_2:21696084-21696103 | Msa0243930:intron | 35.0% |
| GAATTGTTGCCATCAATTAG+GGG | - | chr2_2:21696118-21696137 | Msa0243930:intron | 35.0% | |
| TTTACAAGCAAACAGTGAGA+TGG | - | chr2_2:21696174-21696193 | Msa0243930:intron | 35.0% | |
| AAATACTCGAGGAAAACGAT+TGG | - | chr2_2:21696224-21696243 | Msa0243930:intron | 35.0% | |
| AGTAGCATTTCAAGAACTAG+TGG | + | chr2_2:21696304-21696323 | None:intergenic | 35.0% | |
| !! | TCTATTGGCTCGAAAACATT+CGG | - | chr2_2:21696513-21696532 | Msa0243930:intron | 35.0% |
| TTTGTGGTTGTCAAAGTCTT+GGG | - | chr2_2:21696536-21696555 | Msa0243930:intron | 35.0% | |
| !!! | TCTCCATCTGTTTTAAAGTG+AGG | - | chr2_2:21696622-21696641 | Msa0243930:intron | 35.0% |
| ! | GCGATAATTGTTACTTGAGA+TGG | + | chr2_2:21696945-21696964 | None:intergenic | 35.0% |
| CTCAAAATTTCCAACTTCTG+CGG | + | chr2_2:21696967-21696986 | None:intergenic | 35.0% | |
| AATTGAAGATACTAGCATGG+CGG | + | chr2_2:21697079-21697098 | None:intergenic | 35.0% | |
| !! | ACATATGTCATTGATTTCGC+AGG | - | chr2_2:21697324-21697343 | Msa0243930:intron | 35.0% |
| CATGCAGAATTGCTTAAAAG+AGG | - | chr2_2:21697430-21697449 | Msa0243930:intron | 35.0% | |
| !! | TTGCCTTTGAAGTTGATATC+TGG | - | chr2_2:21697709-21697728 | Msa0243930:intron | 35.0% |
| AGTCCAGATATCAACTTCAA+AGG | + | chr2_2:21697715-21697734 | None:intergenic | 35.0% | |
| !! | TTTGAAGTTGATATCTGGAC+TGG | - | chr2_2:21697714-21697733 | Msa0243930:intron | 35.0% |
| ! | TATGTCTACAGTTTTCTCTG+TGG | - | chr2_2:21697869-21697888 | Msa0243930:intron | 35.0% |
| TAGCGAATCATACGTTTACT+TGG | + | chr2_2:21697940-21697959 | None:intergenic | 35.0% | |
| ! | CAGGAAAGAGAGAAGACTTT+TGG | + | chr2_2:21692031-21692050 | None:intergenic | 40.0% |
| ACCCATTATTTCACTTGGAC+TGG | - | chr2_2:21692060-21692079 | Msa0243930:three_prime_UTR | 40.0% | |
| GTCCAGTCCAAGTGAAATAA+TGG | + | chr2_2:21692065-21692084 | None:intergenic | 40.0% | |
| ! | GTGAAGAATCTTGTTGGTGA+TGG | - | chr2_2:21692285-21692304 | Msa0243930:CDS | 40.0% |
| !! | TTGGTGATGGACCAAAGTAA+AGG | - | chr2_2:21692298-21692317 | Msa0243930:CDS | 40.0% |
| !! | TGGTGATGGACCAAAGTAAA+GGG | - | chr2_2:21692299-21692318 | Msa0243930:CDS | 40.0% |
| ! | ACAAAGCTTTTCCAGTCATC+TGG | - | chr2_2:21692383-21692402 | Msa0243930:CDS | 40.0% |
| CAGCTAGATTTCTTCGTAAG+TGG | + | chr2_2:21692552-21692571 | None:intergenic | 40.0% | |
| GAGAAAGGGTTAGGTTAACA+GGG | + | chr2_2:21692827-21692846 | None:intergenic | 40.0% | |
| TGAGAAAGGGTTAGGTTAAC+AGG | + | chr2_2:21692828-21692847 | None:intergenic | 40.0% | |
| !! | CAATCACGTGCTTTTGAGAA+AGG | + | chr2_2:21692842-21692861 | None:intergenic | 40.0% |
| AGTCACAACTAACCATTTGG+TGG | - | chr2_2:21692914-21692933 | Msa0243930:CDS | 40.0% | |
| ! | TAATTGGAGTGGACCACTTT+TGG | - | chr2_2:21692972-21692991 | Msa0243930:CDS | 40.0% |
| TTAGTGACTCATGAGGATAG+TGG | + | chr2_2:21693223-21693242 | None:intergenic | 40.0% | |
| ! | TGTCTTAAGGGCACAAGATA+AGG | + | chr2_2:21693859-21693878 | None:intergenic | 40.0% |
| CTAAAGCCATTTCTCTGCAA+AGG | + | chr2_2:21694883-21694902 | None:intergenic | 40.0% | |
| !! | TTGCAGAGAAATGGCTTTAG+AGG | - | chr2_2:21694883-21694902 | Msa0243930:intron | 40.0% |
| TTGCTTCAGCTCAGTTTAGA+AGG | - | chr2_2:21694939-21694958 | Msa0243930:intron | 40.0% | |
| GTAGAAACTAAGTGGATGAG+AGG | + | chr2_2:21694965-21694984 | None:intergenic | 40.0% | |
| !!! | TGCAACTTTTTCGGTCGAAA+AGG | - | chr2_2:21695038-21695057 | Msa0243930:intron | 40.0% |
| ! | CATCTAACTATATCGGTTGC+TGG | + | chr2_2:21695497-21695516 | None:intergenic | 40.0% |
| CAGCAACCGATATAGTTAGA+TGG | - | chr2_2:21695495-21695514 | Msa0243930:intron | 40.0% | |
| TCACCGGTAGACTCTTTAAA+AGG | + | chr2_2:21695539-21695558 | None:intergenic | 40.0% | |
| !! | TTTAGTGCTGCTTTGTGAAG+GGG | + | chr2_2:21695848-21695867 | None:intergenic | 40.0% |
| !!! | CTTTTAGTGCTGCTTTGTGA+AGG | + | chr2_2:21695850-21695869 | None:intergenic | 40.0% |
| CTTCACAAAGCAGCACTAAA+AGG | - | chr2_2:21695848-21695867 | Msa0243930:intron | 40.0% | |
| AAGCAGCACTAAAAGGTGAT+TGG | - | chr2_2:21695855-21695874 | Msa0243930:intron | 40.0% | |
| TGGCAGAAATCAGCAATGTT+TGG | + | chr2_2:21695910-21695929 | None:intergenic | 40.0% | |
| TTTCTGCCATAACAAATGGC+TGG | - | chr2_2:21695921-21695940 | Msa0243930:intron | 40.0% | |
| TTCTGCCATAACAAATGGCT+GGG | - | chr2_2:21695922-21695941 | Msa0243930:intron | 40.0% | |
| TGTTCACTTTGTGGAGGAAT+TGG | - | chr2_2:21695979-21695998 | Msa0243930:intron | 40.0% | |
| !! | AGGTGTTACTCCTCTTTACT+TGG | - | chr2_2:21696147-21696166 | Msa0243930:intron | 40.0% |
| TGTAAAGCAGCCAAGTAAAG+AGG | + | chr2_2:21696160-21696179 | None:intergenic | 40.0% | |
| GTTCCTCACTTGTATAGACT+CGG | - | chr2_2:21696255-21696274 | Msa0243930:intron | 40.0% | |
| TTCCTCACTTGTATAGACTC+GGG | - | chr2_2:21696256-21696275 | Msa0243930:intron | 40.0% | |
| TGTATAGACTCGGGACTTTA+TGG | - | chr2_2:21696265-21696284 | Msa0243930:intron | 40.0% | |
| ! | TGAGACGGGTTTACATCTAT+TGG | - | chr2_2:21696498-21696517 | Msa0243930:intron | 40.0% |
| GTTTGTGGTTGTCAAAGTCT+TGG | - | chr2_2:21696535-21696554 | Msa0243930:intron | 40.0% | |
| CGTCGTATAAGCTTAAGCAT+TGG | + | chr2_2:21696864-21696883 | None:intergenic | 40.0% | |
| TTAAGCTTATACGACGCATC+TGG | - | chr2_2:21696868-21696887 | Msa0243930:intron | 40.0% | |
| TAAGCTTATACGACGCATCT+GGG | - | chr2_2:21696869-21696888 | Msa0243930:intron | 40.0% | |
| TCTAGATGACTCAGAGATGA+TGG | - | chr2_2:21696905-21696924 | Msa0243930:intron | 40.0% | |
| ACTATATTGAGTCGATCAGG+TGG | + | chr2_2:21697194-21697213 | None:intergenic | 40.0% | |
| GAGACTATATTGAGTCGATC+AGG | + | chr2_2:21697197-21697216 | None:intergenic | 40.0% | |
| ! | GATCGACTCAATATAGTCTC+TGG | - | chr2_2:21697197-21697216 | Msa0243930:intron | 40.0% |
| GCTCGAATTATCATGGTTTG+AGG | - | chr2_2:21697238-21697257 | Msa0243930:intron | 40.0% | |
| !! | TATGTCATTGATTTCGCAGG+AGG | - | chr2_2:21697327-21697346 | Msa0243930:intron | 40.0% |
| TCTTTCGTAAATAGTTCGCG+AGG | + | chr2_2:21697409-21697428 | None:intergenic | 40.0% | |
| TGCTTAAAAGAGGAGAGTCA+TGG | - | chr2_2:21697440-21697459 | Msa0243930:intron | 40.0% | |
| GCAAACAGCGAATTCTTGTA+TGG | - | chr2_2:21697468-21697487 | Msa0243930:intron | 40.0% | |
| TCAGCTGCATTTAGTATACC+AGG | - | chr2_2:21697523-21697542 | Msa0243930:intron | 40.0% | |
| AAAGCAAATACGAGGAATGC+TGG | + | chr2_2:21697592-21697611 | None:intergenic | 40.0% | |
| AGTCGGATAAAGCAAATACG+AGG | + | chr2_2:21697600-21697619 | None:intergenic | 40.0% | |
| ATTTGCTTTATCCGACTCCA+TGG | - | chr2_2:21697603-21697622 | Msa0243930:intron | 40.0% | |
| !! | AAGGCATTGTGCCTATTTCA+TGG | - | chr2_2:21698041-21698060 | Msa0243930:five_prime_UTR | 40.0% |
| CAGAAATTCTCCTTGCAGCA+GGG | + | chr2_2:21692161-21692180 | None:intergenic | 45.0% | |
| TCAGAAATTCTCCTTGCAGC+AGG | + | chr2_2:21692162-21692181 | None:intergenic | 45.0% | |
| !! | CGTGCTTTTGAGAAAGGGTT+AGG | + | chr2_2:21692836-21692855 | None:intergenic | 45.0% |
| CCTTGAGTCTCAACCAAAAG+TGG | + | chr2_2:21692988-21693007 | None:intergenic | 45.0% | |
| !! | CCACTTTTGGTTGAGACTCA+AGG | - | chr2_2:21692985-21693004 | Msa0243930:CDS | 45.0% |
| TGACTGGTGAGTGACTTTGT+TGG | + | chr2_2:21693194-21693213 | None:intergenic | 45.0% | |
| GTCACACAAGTCAGGGAATA+TGG | + | chr2_2:21693436-21693455 | None:intergenic | 45.0% | |
| TCCTATCCTGACTCTCAAAC+GGG | + | chr2_2:21693458-21693477 | None:intergenic | 45.0% | |
| CTCCTATCCTGACTCTCAAA+CGG | + | chr2_2:21693459-21693478 | None:intergenic | 45.0% | |
| ! | CAATGGTTGCTGGCTAGATT+TGG | + | chr2_2:21694912-21694931 | None:intergenic | 45.0% |
| CAACTCTATGCAATGGTTGC+TGG | + | chr2_2:21694922-21694941 | None:intergenic | 45.0% | |
| GCTGAAGCAACTCTATGCAA+TGG | + | chr2_2:21694929-21694948 | None:intergenic | 45.0% | |
| !!! | ATCTTCCGGGCCTTTTTTCT+AGG | + | chr2_2:21695120-21695139 | None:intergenic | 45.0% |
| !! | GAAGGGGAACACATTGGTTT+AGG | + | chr2_2:21695832-21695851 | None:intergenic | 45.0% |
| CTTTGTGAAGGGGAACACAT+TGG | + | chr2_2:21695838-21695857 | None:intergenic | 45.0% | |
| TTGTTGCCATCAATTAGGGG+TGG | - | chr2_2:21696121-21696140 | Msa0243930:intron | 45.0% | |
| AAGCAAACAGTGAGATGGCA+TGG | - | chr2_2:21696179-21696198 | Msa0243930:intron | 45.0% | |
| CAGAGGTGATAGCAATGAGA+CGG | - | chr2_2:21696483-21696502 | Msa0243930:intron | 45.0% | |
| AGAGGTGATAGCAATGAGAC+GGG | - | chr2_2:21696484-21696503 | Msa0243930:intron | 45.0% | |
| ! | GCTCGAAAACATTCGGTTTG+TGG | - | chr2_2:21696520-21696539 | Msa0243930:intron | 45.0% |
| ACAATTATCGCCGCAGAAGT+TGG | - | chr2_2:21696954-21696973 | Msa0243930:intron | 45.0% | |
| GTTTCGACTCTCATAGCTAC+AGG | - | chr2_2:21697493-21697512 | Msa0243930:intron | 45.0% | |
| GCTGCATTTAGTATACCAGG+TGG | - | chr2_2:21697526-21697545 | Msa0243930:intron | 45.0% | |
| ! | GTGTTATCGTTGTTTCCACC+TGG | + | chr2_2:21697544-21697563 | None:intergenic | 45.0% |
| TGAAGACGAGATAAGTGCCA+TGG | + | chr2_2:21697623-21697642 | None:intergenic | 45.0% | |
| CATCCTTATCTCGCGATATG+CGG | - | chr2_2:21697666-21697685 | Msa0243930:intron | 45.0% | |
| !! | GAAGTTGATATCTGGACTGG+TGG | - | chr2_2:21697717-21697736 | Msa0243930:intron | 45.0% |
| !!! | ATTTTTACAATATTTAATTA+AGG | - | chr2_2:21693741-21693760 | Msa0243930:intron | 5.0% |
| !!! | TTTTTACAATATTTAATTAA+GGG | - | chr2_2:21693742-21693761 | Msa0243930:intron | 5.0% |
| !! | TTAAAAAAATTATAGAATAA+TGG | - | chr2_2:21694353-21694372 | Msa0243930:intron | 5.0% |
| !!! | AAATTTGATTTTTTTTTATA+AGG | - | chr2_2:21694448-21694467 | Msa0243930:intron | 5.0% |
| !!! | AATAAATTTTATTGTTATTA+TGG | - | chr2_2:21697983-21698002 | Msa0243930:five_prime_UTR | 5.0% |
| ! | ACTCATGAGGATAGTGGTGG+TGG | + | chr2_2:21693217-21693236 | None:intergenic | 50.0% |
| ! | GTGACTCATGAGGATAGTGG+TGG | + | chr2_2:21693220-21693239 | None:intergenic | 50.0% |
| CAAACGGGTCACACAAGTCA+GGG | + | chr2_2:21693443-21693462 | None:intergenic | 50.0% | |
| TCAAACGGGTCACACAAGTC+AGG | + | chr2_2:21693444-21693463 | None:intergenic | 50.0% | |
| ACCCGTTTGAGAGTCAGGAT+AGG | - | chr2_2:21693454-21693473 | Msa0243930:intron | 50.0% | |
| ! | GGTTGCCCAGCCATTTGTTA+TGG | + | chr2_2:21695930-21695949 | None:intergenic | 50.0% |
| AACCGCACTCCATATTGCAG+CGG | - | chr2_2:21695946-21695965 | Msa0243930:intron | 50.0% | |
| ! | GATTTGCTCCCGCTGCAATA+TGG | + | chr2_2:21695958-21695977 | None:intergenic | 50.0% |
| TGCTCTTTGCTTTGCTGCAG+CGG | - | chr2_2:21696054-21696073 | Msa0243930:intron | 50.0% | |
| CCTAGTCCACCCCTAATTGA+TGG | + | chr2_2:21696130-21696149 | None:intergenic | 50.0% | |
| ! | CCATCAATTAGGGGTGGACT+AGG | - | chr2_2:21696127-21696146 | Msa0243930:intron | 50.0% |
| GTCCCGAGTCTATACAAGTG+AGG | + | chr2_2:21696261-21696280 | None:intergenic | 50.0% | |
| CGAGATAAGTGCCATGGAGT+CGG | + | chr2_2:21697617-21697636 | None:intergenic | 50.0% | |
| CGCATATCGCGAGATAAGGA+TGG | + | chr2_2:21697668-21697687 | None:intergenic | 50.0% | |
| CCTTGCAGCAGGGTGATTGA+TGG | + | chr2_2:21692151-21692170 | None:intergenic | 55.0% | |
| CCATCAATCACCCTGCTGCA+AGG | - | chr2_2:21692148-21692167 | Msa0243930:exon | 55.0% | |
| !! | AGGATAGTGGTGGTGGTGAC+TGG | + | chr2_2:21693210-21693229 | None:intergenic | 55.0% |
| GTGTGACCCGTTTGAGAGTC+AGG | - | chr2_2:21693449-21693468 | Msa0243930:intron | 55.0% | |
| ACCGCACTCCATATTGCAGC+GGG | - | chr2_2:21695947-21695966 | Msa0243930:intron | 55.0% | |
| TCCCGCTGCAATATGGAGTG+CGG | + | chr2_2:21695951-21695970 | None:intergenic | 55.0% | |
| CTTTGCTTTGCTGCAGCGGT+TGG | - | chr2_2:21696058-21696077 | Msa0243930:intron | 55.0% | |
| !! | GCACTTGCTTTTGCTCGCAG+AGG | - | chr2_2:21696466-21696485 | Msa0243930:intron | 55.0% |
| GCTCCGCATATCGCGAGATA+AGG | + | chr2_2:21697672-21697691 | None:intergenic | 55.0% | |
| TATCTCGCGATATGCGGAGC+AGG | - | chr2_2:21697672-21697691 | Msa0243930:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 21692028 | 21698098 | 21692028 | ID=Msa0243930;Name=Msa0243930 |
| chr2_2 | mRNA | 21692028 | 21698098 | 21692028 | ID=Msa0243930-mRNA-1;Parent=Msa0243930;Name=Msa0243930-mRNA-1;_AED=0.31;_eAED=0.31;_QI=231|0.83|0.85|1|0.66|0.57|7|138|555 |
| chr2_2 | exon | 21692028 | 21692780 | 21692028 | ID=Msa0243930-mRNA-1:exon:8536;Parent=Msa0243930-mRNA-1 |
| chr2_2 | exon | 21692867 | 21693279 | 21692867 | ID=Msa0243930-mRNA-1:exon:8535;Parent=Msa0243930-mRNA-1 |
| chr2_2 | exon | 21693639 | 21693692 | 21693639 | ID=Msa0243930-mRNA-1:exon:8534;Parent=Msa0243930-mRNA-1 |
| chr2_2 | exon | 21693840 | 21694316 | 21693840 | ID=Msa0243930-mRNA-1:exon:8533;Parent=Msa0243930-mRNA-1 |
| chr2_2 | exon | 21695140 | 21695237 | 21695140 | ID=Msa0243930-mRNA-1:exon:8532;Parent=Msa0243930-mRNA-1 |
| chr2_2 | exon | 21697093 | 21697163 | 21697093 | ID=Msa0243930-mRNA-1:exon:8531;Parent=Msa0243930-mRNA-1 |
| chr2_2 | exon | 21697928 | 21698098 | 21697928 | ID=Msa0243930-mRNA-1:exon:8530;Parent=Msa0243930-mRNA-1 |
| chr2_2 | five_prime_UTR | 21697928 | 21698098 | 21697928 | ID=Msa0243930-mRNA-1:five_prime_utr;Parent=Msa0243930-mRNA-1 |
| chr2_2 | five_prime_UTR | 21697104 | 21697163 | 21697104 | ID=Msa0243930-mRNA-1:five_prime_utr;Parent=Msa0243930-mRNA-1 |
| chr2_2 | CDS | 21697093 | 21697103 | 21697093 | ID=Msa0243930-mRNA-1:cds;Parent=Msa0243930-mRNA-1 |
| chr2_2 | CDS | 21695140 | 21695237 | 21695140 | ID=Msa0243930-mRNA-1:cds;Parent=Msa0243930-mRNA-1 |
| chr2_2 | CDS | 21693840 | 21694316 | 21693840 | ID=Msa0243930-mRNA-1:cds;Parent=Msa0243930-mRNA-1 |
| chr2_2 | CDS | 21693639 | 21693692 | 21693639 | ID=Msa0243930-mRNA-1:cds;Parent=Msa0243930-mRNA-1 |
| chr2_2 | CDS | 21692867 | 21693279 | 21692867 | ID=Msa0243930-mRNA-1:cds;Parent=Msa0243930-mRNA-1 |
| chr2_2 | CDS | 21692166 | 21692780 | 21692166 | ID=Msa0243930-mRNA-1:cds;Parent=Msa0243930-mRNA-1 |
| chr2_2 | three_prime_UTR | 21692028 | 21692165 | 21692028 | ID=Msa0243930-mRNA-1:three_prime_utr;Parent=Msa0243930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
