AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1454080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454080 MtrunA17_Chr3g0141761 65.728 213 17 4 1 212 311 468 1.27e-75 237
Msa1454080 MtrunA17_Chr4g0035171 52.113 213 46 4 1 212 309 466 1.54e-61 200
Msa1454080 MtrunA17_Chr7g0271011 44.298 228 63 6 1 219 309 481 7.65e-46 159
Msa1454080 MtrunA17_Chr4g0074531 39.623 212 74 4 1 212 302 459 4.14e-42 149
Msa1454080 MtrunA17_Chr3g0144731 56.198 121 22 3 93 212 9 99 3.21e-37 127
Msa1454080 MtrunA17_Chr5g0447341 32.710 214 88 5 1 212 294 453 3.42e-32 122
Msa1454080 MtrunA17_Chr3g0120471 32.719 217 89 5 1 216 293 453 8.46e-30 115
Msa1454080 MtrunA17_Chr0c30g0494071 60.317 63 25 0 1 63 223 285 4.24e-19 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454080 AT1G27680.1 57.277 213 35 4 1 212 299 456 8.17e-68 217
Msa1454080 AT2G21590.2 48.182 220 58 5 1 219 304 468 4.42e-59 194
Msa1454080 AT2G21590.3 48.182 220 58 5 1 219 304 468 4.42e-59 194
Msa1454080 AT2G21590.5 48.182 220 58 5 1 219 304 468 4.42e-59 194
Msa1454080 AT2G21590.4 48.182 220 58 5 1 219 304 468 4.42e-59 194
Msa1454080 AT2G21590.7 48.182 220 58 5 1 219 304 468 4.42e-59 194
Msa1454080 AT2G21590.1 48.182 220 58 5 1 219 304 468 4.42e-59 194
Msa1454080 AT2G21590.6 48.182 220 58 5 1 219 304 468 4.42e-59 194
Msa1454080 AT4G39210.2 46.119 219 64 3 1 219 302 466 1.84e-54 182
Msa1454080 AT4G39210.1 46.119 219 64 3 1 219 302 466 1.84e-54 182
Msa1454080 AT5G19220.1 41.981 212 69 4 1 212 303 460 2.22e-42 150
Msa1454080 AT5G48300.1 32.569 218 91 5 1 216 299 462 5.94e-32 121
Msa1454080 AT1G05610.2 30.357 168 85 4 2 166 258 396 1.77e-18 83.6
Msa1454080 AT1G05610.1 29.167 168 81 4 2 166 258 390 3.04e-16 77.0

Find 121 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAATGGATTCTGCAATTT+AGG 0.115269 tig0035026:+27892 Msa1454080:CDS
TTGTCTCGCGCCTACAATTT+TGG 0.170350 tig0035026:+25365 Msa1454080:five_prime_UTR
TCCTTCTTTGATGCAAAATT+TGG 0.184297 tig0035026:+26983 Msa1454080:CDS
GGATCATAGAATTGAAATTT+TGG 0.196615 tig0035026:-27423 Msa1454080:intergenic
TTTGGTATATGCCTTCTTAA+TGG 0.210226 tig0035026:+27877 Msa1454080:CDS
ACCTAAGAACACACTGTTTC+TGG 0.215084 tig0035026:-24272 Msa1454080:intergenic
TGTAGTCGAGCATCAGATTA+TGG 0.220724 tig0035026:+26441 Msa1454080:intron
CCTGTAACTTATTTGTATTT+AGG 0.245464 tig0035026:+27035 Msa1454080:CDS
TGCTGAATCCATATTTGATT+TGG 0.249136 tig0035026:-24176 Msa1454080:intergenic
ATGCTGTGAGGCAATTTATA+TGG 0.264007 tig0035026:+25613 Msa1454080:five_prime_UTR
TTATTGTAAGAATGATAAAT+TGG 0.278259 tig0035026:+27578 Msa1454080:intron
AAAGTGTAGCTTCAATCATT+TGG 0.280323 tig0035026:+24551 Msa1454080:five_prime_UTR
GAGCATATATTGATACTTTC+TGG 0.283928 tig0035026:+26096 Msa1454080:five_prime_UTR
AGAGTCTGGTGTGGAGCTTC+AGG 0.286874 tig0035026:+27692 Msa1454080:CDS
GACATGATCGTACCTGATTT+TGG 0.288851 tig0035026:-28009 Msa1454080:intergenic
TAAACTCTCCAAATCAAATA+TGG 0.295746 tig0035026:+24168 Msa1454080:five_prime_UTR
ACACCCATGGACGCAATATA+TGG 0.298480 tig0035026:-26702 Msa1454080:intergenic
GCATGTTGATACCACAGTTC+TGG 0.304379 tig0035026:+26651 Msa1454080:intron
CCATTTGGGAATGAATGATT+TGG 0.308664 tig0035026:-24347 Msa1454080:intergenic
TCTTTACCGAATGAACTATA+TGG 0.310550 tig0035026:+26125 Msa1454080:five_prime_UTR
TTTATTGAATTGAAGAGAAA+TGG 0.322439 tig0035026:-24149 Msa1454080:intergenic
TGCTTTCAAATCTGATCCCT+TGG 0.326561 tig0035026:-26514 Msa1454080:intergenic
TGCATCAAAGAAGGACTCTA+TGG 0.338420 tig0035026:-26975 Msa1454080:intergenic
GAACACAACGTTCTCACTTC+AGG 0.338733 tig0035026:+24374 Msa1454080:five_prime_UTR
CCTAAATACAAATAAGTTAC+AGG 0.343087 tig0035026:-27035 Msa1454080:intergenic
TTAAACATACAGGTTCTGTT+AGG 0.354145 tig0035026:-27007 Msa1454080:intergenic
AGTGTTCAACATTCTATTGT+TGG 0.363187 tig0035026:+27654 Msa1454080:CDS
CGTTGTGTTCAGCTCCATTT+GGG 0.364039 tig0035026:-24361 Msa1454080:intergenic
AAGTGTAGCTTCAATCATTT+GGG 0.379374 tig0035026:+24552 Msa1454080:five_prime_UTR
AATCATTTGGGTGGTGGTGC+TGG 0.383461 tig0035026:+24564 Msa1454080:five_prime_UTR
CTGTTGATGCAATTGCTCAT+AGG 0.388962 tig0035026:-25284 Msa1454080:intergenic
GTAGTCGAGCATCAGATTAT+GGG 0.403067 tig0035026:+26442 Msa1454080:intron
AATGACTACTGGGAAGATAT+TGG 0.405131 tig0035026:+26950 Msa1454080:CDS
GTGAGACTTTCCAAAATTGT+AGG 0.406142 tig0035026:-25375 Msa1454080:intergenic
GCTTTCAAATCTGATCCCTT+GGG 0.406704 tig0035026:-26513 Msa1454080:intergenic
GAAGTGAAGAAAGGTGTCTT+TGG 0.409767 tig0035026:-27444 Msa1454080:intergenic
TAGTAGGTGGTAGGAATCTC+GGG 0.410488 tig0035026:-27467 Msa1454080:intergenic
CTGGAGAAGCTGGGAAGAAA+TGG 0.416925 tig0035026:+25574 Msa1454080:five_prime_UTR
CATTTGGGAATGAATGATTT+GGG 0.417624 tig0035026:-24346 Msa1454080:intergenic
ACGTTGTGTTCAGCTCCATT+TGG 0.423763 tig0035026:-24362 Msa1454080:intergenic
ACAGGATAGTTTAAACATAC+AGG 0.424213 tig0035026:-27017 Msa1454080:intergenic
TTCTCACGGTTGCTTCTTGA+GGG 0.424927 tig0035026:+27626 Msa1454080:CDS
ACTCAAACATCTGGAGAAGC+TGG 0.427143 tig0035026:+25564 Msa1454080:five_prime_UTR
CTGGAACTATTAAAATTGAA+TGG 0.432987 tig0035026:+26750 Msa1454080:CDS
CAAAATCCATATAGTTCATT+CGG 0.437135 tig0035026:-26131 Msa1454080:intergenic
ACCAGAAACAGTGTGTTCTT+AGG 0.439170 tig0035026:+24271 Msa1454080:five_prime_UTR
GAATGATTTGGGTGATTGAA+TGG 0.440793 tig0035026:-24335 Msa1454080:intergenic
GGTTCTACATGCAATGACTT+TGG 0.444922 tig0035026:+26771 Msa1454080:CDS
CATGTTGATACCACAGTTCT+GGG 0.448269 tig0035026:+26652 Msa1454080:five_prime_UTR
TGTTGTGCTTAAACTTCCCT+TGG 0.453939 tig0035026:-24302 Msa1454080:intergenic
TGCTGTGAGGCAATTTATAT+GGG 0.454350 tig0035026:+25614 Msa1454080:five_prime_UTR
TCACAGCATCAGCTGTTCCT+TGG 0.457682 tig0035026:-25599 Msa1454080:intergenic
TTGGAGAAAATACCAAAATC+AGG 0.459198 tig0035026:+27997 Msa1454080:CDS
GTCATGCTCTGTGACTATAA+TGG 0.460115 tig0035026:+27072 Msa1454080:CDS
ATGGCTGCAACTCAAACATC+TGG 0.460397 tig0035026:+25555 Msa1454080:five_prime_UTR
TGTTGATGCAATTGCTCATA+GGG 0.465603 tig0035026:-25283 Msa1454080:intergenic
AACACAACGTTCTCACTTCA+GGG 0.469054 tig0035026:+24375 Msa1454080:five_prime_UTR
AGTCTGTAACACCCTCCAAT+TGG 0.472087 tig0035026:-25251 Msa1454080:intergenic
TAAACATACAGGTTCTGTTA+GGG 0.476837 tig0035026:-27006 Msa1454080:intergenic
ATCTCTGCTGGCAGAAGGAA+AGG 0.478232 tig0035026:+27963 Msa1454080:CDS
ATACCAAATAGAAGATGAAA+AGG 0.480858 tig0035026:-27862 Msa1454080:intergenic
TTAGTAGGTGGTAGGAATCT+CGG 0.485975 tig0035026:-27468 Msa1454080:intergenic
TTTCTACTTTAGTAGGTGGT+AGG 0.488998 tig0035026:-27476 Msa1454080:intergenic
CAAAGTGCGAGATAGAGAAA+TGG 0.490194 tig0035026:-24058 Msa1454080:intergenic
TTGATGAAAATTGACGAAAC+AGG 0.491996 tig0035026:+26465 Msa1454080:five_prime_UTR
ATTCTCACGGTTGCTTCTTG+AGG 0.494363 tig0035026:+27625 Msa1454080:CDS
GTTTCGAACTGAGACCCTAC+TGG 0.498065 tig0035026:+26731 Msa1454080:CDS
AGGAAAGGGCCCGTTGGTGT+TGG 0.502348 tig0035026:+27978 Msa1454080:CDS
GTCTGAAATTGCATCTCTGC+TGG 0.504662 tig0035026:+27951 Msa1454080:CDS
CCAAATCATTCATTCCCAAA+TGG 0.506475 tig0035026:+24347 Msa1454080:five_prime_UTR
CGTGTCTTCCCATGGATGAC+AGG 0.510435 tig0035026:+26298 Msa1454080:five_prime_UTR
ATACGATCACGTTTAGAGTC+TGG 0.512075 tig0035026:+27678 Msa1454080:CDS
TTGAATTGAAGAGAAATGGA+AGG 0.512838 tig0035026:-24145 Msa1454080:intergenic
AGCTTCAATCATTTGGGTGG+TGG 0.514317 tig0035026:+24558 Msa1454080:five_prime_UTR
ACATCCATATATTGCGTCCA+TGG 0.515257 tig0035026:+26698 Msa1454080:exon
TTGTGCCCACTGACAGCAGA+TGG 0.525142 tig0035026:-26807 Msa1454080:intergenic
AAATTGGTTTCAATAGATTG+TGG 0.531549 tig0035026:+27594 Msa1454080:CDS
CTAAGCAAAATCAGTACTGA+AGG 0.534013 tig0035026:+24235 Msa1454080:five_prime_UTR
ATAGATATACCTGTCATCCA+TGG 0.538901 tig0035026:-26307 Msa1454080:intergenic
AATTGCAGAATCCATTAAGA+AGG 0.540929 tig0035026:-27888 Msa1454080:intergenic
TGTCAGTGGGCACAATGTCC+AGG 0.542148 tig0035026:+26815 Msa1454080:CDS
TCTCTGCTGGCAGAAGGAAA+GGG 0.545769 tig0035026:+27964 Msa1454080:CDS
TGTGGATGCAATTATTCTCA+CGG 0.551181 tig0035026:+27612 Msa1454080:CDS
CATCCATATATTGCGTCCAT+GGG 0.557589 tig0035026:+26699 Msa1454080:exon
CTCAAACATCTGGAGAAGCT+GGG 0.560522 tig0035026:+25565 Msa1454080:five_prime_UTR
AAAATCAGTACTGAAGGAGT+TGG 0.564723 tig0035026:+24241 Msa1454080:five_prime_UTR
TCACAGTTCGTGTCTTCCCA+TGG 0.565861 tig0035026:+26290 Msa1454080:five_prime_UTR
ATTGCATCTCTGCTGGCAGA+AGG 0.570677 tig0035026:+27958 Msa1454080:CDS
TATTTAGGTTCATATTCTCA+AGG 0.572292 tig0035026:+27050 Msa1454080:CDS
ATCATCCCATCTGCTGTCAG+TGG 0.575158 tig0035026:+26801 Msa1454080:CDS
AGTAATCAGCACCATCATCA+TGG 0.578704 tig0035026:-27918 Msa1454080:intergenic
TTTGCTTAGATTGGTACTGA+AGG 0.582189 tig0035026:-24221 Msa1454080:intergenic
ATTTGGGTGATTGAATGGTA+AGG 0.586852 tig0035026:-24330 Msa1454080:intergenic
AATTGAAGAGAAATGGAAGG+AGG 0.589535 tig0035026:-24142 Msa1454080:intergenic
GGGATCAGATTTGAAAGCAA+TGG 0.595427 tig0035026:+26518 Msa1454080:five_prime_UTR
GGCAGAAGGAAAGGGCCCGT+TGG 0.596277 tig0035026:+27972 Msa1454080:CDS
TTGATTACAGACATTTCAAG+AGG 0.597544 tig0035026:+24495 Msa1454080:intron
TAGATATACCTGTCATCCAT+GGG 0.604556 tig0035026:-26306 Msa1454080:intergenic
GCTGGGAAGAAATGGTTCCA+AGG 0.605702 tig0035026:+25582 Msa1454080:five_prime_UTR
AATTTAGGATACCATGATGA+TGG 0.608992 tig0035026:+27907 Msa1454080:CDS
ACAGTTTGCAGAAAAGCCCA+AGG 0.614014 tig0035026:+26497 Msa1454080:five_prime_UTR
TCATCCCATCTGCTGTCAGT+GGG 0.615015 tig0035026:+26802 Msa1454080:CDS
AATCTCGGGGAAGTGAAGAA+AGG 0.617323 tig0035026:-27453 Msa1454080:intergenic
CAATGATTATCAAGATTCCA+CGG 0.633265 tig0035026:+24400 Msa1454080:five_prime_UTR
TGTAGGCGCGAGACAAGTGA+CGG 0.633994 tig0035026:-25358 Msa1454080:intergenic
TCGAAACACATAAACACCCA+TGG 0.635542 tig0035026:-26715 Msa1454080:intergenic
TGTAGCTTCAATCATTTGGG+TGG 0.643554 tig0035026:+24555 Msa1454080:five_prime_UTR
TGATTACAGACATTTCAAGA+GGG 0.649339 tig0035026:+24496 Msa1454080:intron
TTTCTGCAAACTGTATAATG+CGG 0.653342 tig0035026:-26488 Msa1454080:intergenic
GTTCTTAGGTGAAACTACCA+AGG 0.654571 tig0035026:+24285 Msa1454080:five_prime_UTR
TTCTTAGGTGAAACTACCAA+GGG 0.656054 tig0035026:+24286 Msa1454080:five_prime_UTR
ATCACGTTTAGAGTCTGGTG+TGG 0.660802 tig0035026:+27683 Msa1454080:CDS
TCACTCATAGAAATTTGTAG+AGG 0.663631 tig0035026:+23963 None:intergenic
CAGTTTGCAGAAAAGCCCAA+GGG 0.674269 tig0035026:+26498 Msa1454080:five_prime_UTR
TGTGCCCACTGACAGCAGAT+GGG 0.681391 tig0035026:-26806 Msa1454080:intergenic
AGTAGGTGGTAGGAATCTCG+GGG 0.683903 tig0035026:-27466 Msa1454080:intergenic
ATGAGCAATTGCATCAACAG+TGG 0.694726 tig0035026:+25287 Msa1454080:five_prime_UTR
CTTGAGATACCCCAGAACTG+TGG 0.695432 tig0035026:-26662 Msa1454080:intergenic
AAGGAACAGCTGATGCTGTG+AGG 0.699362 tig0035026:+25601 Msa1454080:five_prime_UTR
ATGTTGATACCACAGTTCTG+GGG 0.721252 tig0035026:+26653 Msa1454080:five_prime_UTR
TAGCAAAAGAGCCAAACCTG+CGG 0.729852 tig0035026:+24608 Msa1454080:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTCAATTTAAAAACAGA+TGG + tig0035026:27189-27208 Msa1454080:intron 15.0%
!! TTATTGTAAGAATGATAAAT+TGG + tig0035026:27578-27597 Msa1454080:intron 15.0%
!! CAATTAGCTAAAAAAAATTA+CGG - tig0035026:27834-27853 Msa1454080:intergenic 15.0%
!! TTTATTGAATTGAAGAGAAA+TGG - tig0035026:24152-24171 None:intergenic 20.0%
!! AATTCTAATATCATCAAAAG+AGG + tig0035026:24428-24447 Msa1454080:intron 20.0%
!! ATTCTAATATCATCAAAAGA+GGG + tig0035026:24429-24448 Msa1454080:intron 20.0%
!!! TAGGTGAAATTTTATTTTGT+AGG + tig0035026:24749-24768 Msa1454080:intron 20.0%
!!! TTTTATATTTTAACCCACTT+GGG - tig0035026:24968-24987 Msa1454080:intergenic 20.0%
!!! ATTTTATATTTTAACCCACT+TGG - tig0035026:24969-24988 Msa1454080:intergenic 20.0%
!!! TACATAGTTTGTTACTATTT+TGG + tig0035026:25212-25231 Msa1454080:intron 20.0%
!! AAAACAAGAATAAATGTGAT+TGG + tig0035026:25716-25735 Msa1454080:intron 20.0%
!! TAATCTATGATTACAACTAA+TGG + tig0035026:26178-26197 Msa1454080:intron 20.0%
!!! TATTCGTTTTCTAAAACTAA+TGG + tig0035026:26214-26233 Msa1454080:intron 20.0%
!!! AGGTATACATTTTTACTTTT+CGG + tig0035026:27712-27731 Msa1454080:intron 20.0%
! TAAACTCTCCAAATCAAATA+TGG + tig0035026:24168-24187 Msa1454080:five_prime_UTR 25.0%
!!! AAAAGTAATATTTTTACCGC+AGG - tig0035026:24627-24646 Msa1454080:intergenic 25.0%
! TGTTTAATGTTTAGTAGTAG+TGG + tig0035026:24680-24699 Msa1454080:intron 25.0%
!!! TGCATAGTTTGTTACTATTT+AGG + tig0035026:24730-24749 Msa1454080:intron 25.0%
!!! TTTATTTTGTAGGTTCCAAT+TGG + tig0035026:24759-24778 Msa1454080:intron 25.0%
! ACTATCAGCTTAATTAAGAA+TGG + tig0035026:24792-24811 Msa1454080:intron 25.0%
! AAGAATGGCTTATTATGTAT+AGG + tig0035026:24807-24826 Msa1454080:intron 25.0%
! TAGAAATGTAGCAAGATAAA+AGG + tig0035026:25481-25500 Msa1454080:intron 25.0%
!! ATTGATAATTGCATACACAT+AGG + tig0035026:25531-25550 Msa1454080:intron 25.0%
! CAAAATCCATATAGTTCATT+CGG - tig0035026:26134-26153 Msa1454080:intergenic 25.0%
!!! GTTTTAGAAAACGAATAACA+GGG - tig0035026:26211-26230 Msa1454080:intergenic 25.0%
!!! AGTTTTAGAAAACGAATAAC+AGG - tig0035026:26212-26231 Msa1454080:intergenic 25.0%
! TCATTCTATCTTTACATTGA+AGG + tig0035026:26357-26376 Msa1454080:intron 25.0%
! AAATGGATGTAAGAAATATC+AGG - tig0035026:26564-26583 Msa1454080:intergenic 25.0%
! AAACTTACTAGCAATTATTC+AGG - tig0035026:26590-26609 Msa1454080:intergenic 25.0%
! ATTGCTAGTAAGTTTAATCT+AGG + tig0035026:26595-26614 Msa1454080:intron 25.0%
!!! CAATTTTAATAGTTCCAGTA+GGG - tig0035026:26748-26767 Msa1454080:intergenic 25.0%
!!! TCAATTTTAATAGTTCCAGT+AGG - tig0035026:26749-26768 Msa1454080:intergenic 25.0%
! CTGGAACTATTAAAATTGAA+TGG + tig0035026:26750-26769 Msa1454080:CDS 25.0%
! CTTCAAAAATAATAGCAGTA+AGG - tig0035026:26854-26873 Msa1454080:intergenic 25.0%
!! ATTTTTGTTCAATGACTACT+GGG + tig0035026:26940-26959 Msa1454080:CDS 25.0%
! CCTAAATACAAATAAGTTAC+AGG - tig0035026:27038-27057 Msa1454080:intergenic 25.0%
! CCTGTAACTTATTTGTATTT+AGG + tig0035026:27035-27054 Msa1454080:CDS 25.0%
!! TATTTAGGTTCATATTCTCA+AGG + tig0035026:27050-27069 Msa1454080:CDS 25.0%
!!! TAAATTTTGAAAGTTTCTCC+AGG - tig0035026:27255-27274 Msa1454080:intergenic 25.0%
! GTACTAACACTATACAATTA+AGG - tig0035026:27282-27301 Msa1454080:intergenic 25.0%
! AATGACAATCAGTAAAAACA+TGG - tig0035026:27304-27323 Msa1454080:intergenic 25.0%
!! GGATCATAGAATTGAAATTT+TGG - tig0035026:27426-27445 Msa1454080:intergenic 25.0%
!! TTGCATTTTTCTACTTTAGT+AGG - tig0035026:27486-27505 Msa1454080:intergenic 25.0%
! TACTAAAGTAGAAAAATGCA+AGG + tig0035026:27485-27504 Msa1454080:CDS 25.0%
!! AAATTGGTTTCAATAGATTG+TGG + tig0035026:27594-27613 Msa1454080:CDS 25.0%
!!! ACTTTTCTCTTTGTTGTATT+TGG + tig0035026:27743-27762 Msa1454080:intron 25.0%
!!! CTTTTCTCTTTGTTGTATTT+GGG + tig0035026:27744-27763 Msa1454080:intron 25.0%
!! ATTCCTTTTCATCTTCTATT+TGG + tig0035026:27859-27878 Msa1454080:CDS 25.0%
! ATACCAAATAGAAGATGAAA+AGG - tig0035026:27865-27884 Msa1454080:intergenic 25.0%
TTGAATTGAAGAGAAATGGA+AGG - tig0035026:24148-24167 None:intergenic 30.0%
TGCTGAATCCATATTTGATT+TGG - tig0035026:24179-24198 Msa1454080:intergenic 30.0%
!!! AGTACTGATTTTGCTTAGAT+TGG - tig0035026:24233-24252 Msa1454080:intergenic 30.0%
CATTTGGGAATGAATGATTT+GGG - tig0035026:24349-24368 Msa1454080:intergenic 30.0%
CAATGATTATCAAGATTCCA+CGG + tig0035026:24400-24419 Msa1454080:five_prime_UTR 30.0%
TTGATTACAGACATTTCAAG+AGG + tig0035026:24495-24514 Msa1454080:intron 30.0%
TGATTACAGACATTTCAAGA+GGG + tig0035026:24496-24515 Msa1454080:intron 30.0%
!! TGATTGAAGCTACACTTTTT+GGG - tig0035026:24549-24568 Msa1454080:intergenic 30.0%
! ATGATTGAAGCTACACTTTT+TGG - tig0035026:24550-24569 Msa1454080:intergenic 30.0%
AAAGTGTAGCTTCAATCATT+TGG + tig0035026:24551-24570 Msa1454080:five_prime_UTR 30.0%
AAGTGTAGCTTCAATCATTT+GGG + tig0035026:24552-24571 Msa1454080:five_prime_UTR 30.0%
! TTTTGCTAGTAAGAGGAAAA+AGG - tig0035026:24596-24615 Msa1454080:intergenic 30.0%
!! TAATATTTTTACCGCAGGTT+TGG - tig0035026:24622-24641 Msa1454080:intergenic 30.0%
ATAGTACAATCAGTTCCAAT+TGG - tig0035026:24777-24796 Msa1454080:intergenic 30.0%
AAGCACTTGTGAAATTGTTT+AGG - tig0035026:25085-25104 Msa1454080:intergenic 30.0%
TGCATGGATAAACTTATTTG+AGG - tig0035026:25122-25141 Msa1454080:intergenic 30.0%
TCAAATAAGTTTATCCATGC+AGG + tig0035026:25121-25140 Msa1454080:intron 30.0%
CAAATAAGTTTATCCATGCA+GGG + tig0035026:25122-25141 Msa1454080:intron 30.0%
TCTCTGAATTGTTACAATGT+TGG + tig0035026:25156-25175 Msa1454080:intron 30.0%
!!! CTATTTTGGTGAAATTTTGC+AGG + tig0035026:25226-25245 Msa1454080:intron 30.0%
!! ATTTTGGAAAGTCTCACTTT+TGG + tig0035026:25381-25400 Msa1454080:five_prime_UTR 30.0%
!! TTTTGGAAAGTCTCACTTTT+GGG + tig0035026:25382-25401 Msa1454080:five_prime_UTR 30.0%
TAATTGCATACACATAGGTA+TGG + tig0035026:25536-25555 Msa1454080:intron 30.0%
! GCAATTTATATGGGTTTTTG+AGG + tig0035026:25623-25642 Msa1454080:five_prime_UTR 30.0%
! AATGTTGCATATTTGCTGAA+AGG + tig0035026:25657-25676 Msa1454080:intron 30.0%
GAGCATATATTGATACTTTC+TGG + tig0035026:25935-25954 Msa1454080:intron 30.0%
GAGCATATATTGATACTTTC+TGG + tig0035026:25935-25954 Msa1454080:intron 30.0%
TCTTTACCGAATGAACTATA+TGG + tig0035026:26125-26144 Msa1454080:five_prime_UTR 30.0%
! AACTAATGGTGATATTGACT+TGG + tig0035026:26228-26247 Msa1454080:intron 30.0%
!! ACTAATGGTGATATTGACTT+GGG + tig0035026:26229-26248 Msa1454080:intron 30.0%
TTGATGAAAATTGACGAAAC+AGG + tig0035026:26465-26484 Msa1454080:five_prime_UTR 30.0%
TTTCTGCAAACTGTATAATG+CGG - tig0035026:26491-26510 Msa1454080:intergenic 30.0%
AGCAATTATTCAGGCAAAAA+TGG - tig0035026:26581-26600 Msa1454080:intergenic 30.0%
TTGAAGTTCCAATTCTCTTT+AGG + tig0035026:26868-26887 Msa1454080:intron 30.0%
! CATTTTTGTTCAATGACTAC+TGG + tig0035026:26939-26958 Msa1454080:CDS 30.0%
TCCTTCTTTGATGCAAAATT+TGG + tig0035026:26983-27002 Msa1454080:CDS 30.0%
TAAACATACAGGTTCTGTTA+GGG - tig0035026:27009-27028 Msa1454080:intergenic 30.0%
TTAAACATACAGGTTCTGTT+AGG - tig0035026:27010-27029 Msa1454080:intergenic 30.0%
ACAGGATAGTTTAAACATAC+AGG - tig0035026:27020-27039 Msa1454080:intergenic 30.0%
CTAGAGTAAGTTTCTTCAAA+AGG + tig0035026:27354-27373 Msa1454080:intron 30.0%
! CATTTTTCTACTTTAGTAGG+TGG - tig0035026:27483-27502 Msa1454080:intergenic 30.0%
AGTGTTCAACATTCTATTGT+TGG + tig0035026:27654-27673 Msa1454080:CDS 30.0%
TTTGGTATATGCCTTCTTAA+TGG + tig0035026:27877-27896 Msa1454080:CDS 30.0%
AATTGCAGAATCCATTAAGA+AGG - tig0035026:27891-27910 Msa1454080:intergenic 30.0%
!! CTTAATGGATTCTGCAATTT+AGG + tig0035026:27892-27911 Msa1454080:CDS 30.0%
! AATTTAGGATACCATGATGA+TGG + tig0035026:27907-27926 Msa1454080:CDS 30.0%
AATTGAAGAGAAATGGAAGG+AGG - tig0035026:24145-24164 None:intergenic 35.0%
! TTTGCTTAGATTGGTACTGA+AGG - tig0035026:24224-24243 Msa1454080:intergenic 35.0%
! CTAAGCAAAATCAGTACTGA+AGG + tig0035026:24235-24254 Msa1454080:five_prime_UTR 35.0%
! AAAATCAGTACTGAAGGAGT+TGG + tig0035026:24241-24260 Msa1454080:five_prime_UTR 35.0%
TTCTTAGGTGAAACTACCAA+GGG + tig0035026:24286-24305 Msa1454080:five_prime_UTR 35.0%
ATTTGGGTGATTGAATGGTA+AGG - tig0035026:24333-24352 Msa1454080:intergenic 35.0%
! GAATGATTTGGGTGATTGAA+TGG - tig0035026:24338-24357 Msa1454080:intergenic 35.0%
CCATTTGGGAATGAATGATT+TGG - tig0035026:24350-24369 Msa1454080:intergenic 35.0%
CCAAATCATTCATTCCCAAA+TGG + tig0035026:24347-24366 Msa1454080:five_prime_UTR 35.0%
! GATATTAGAATTGAGTACCG+TGG - tig0035026:24420-24439 Msa1454080:intergenic 35.0%
!!! GCTTTTGGAGTCTCAAAATA+GGG - tig0035026:24523-24542 Msa1454080:intergenic 35.0%
!!! TGCTTTTGGAGTCTCAAAAT+AGG - tig0035026:24524-24543 Msa1454080:intergenic 35.0%
ATTCTCTCTAGTGCCAATTT+GGG - tig0035026:24887-24906 Msa1454080:intergenic 35.0%
!!! ATATTTTAACCCACTTGGGT+TGG - tig0035026:24964-24983 Msa1454080:intergenic 35.0%
! GAAATTTTGCAGGTTCCAAT+TGG + tig0035026:25236-25255 Msa1454080:intron 35.0%
TGTTGATGCAATTGCTCATA+GGG - tig0035026:25286-25305 Msa1454080:intergenic 35.0%
GTGAGACTTTCCAAAATTGT+AGG - tig0035026:25378-25397 Msa1454080:intergenic 35.0%
!! TTTGGAAAGTCTCACTTTTG+GGG + tig0035026:25383-25402 Msa1454080:five_prime_UTR 35.0%
TGTAGCAAGATAAAAGGTGA+TGG + tig0035026:25487-25506 Msa1454080:intron 35.0%
ATGCTGTGAGGCAATTTATA+TGG + tig0035026:25613-25632 Msa1454080:five_prime_UTR 35.0%
TGCTGTGAGGCAATTTATAT+GGG + tig0035026:25614-25633 Msa1454080:five_prime_UTR 35.0%
GTGATTTCTGCTTTGCTTAT+CGG + tig0035026:25764-25783 Msa1454080:intron 35.0%
TTGAGAATAGCTAATGTGTC+AGG + tig0035026:25879-25898 Msa1454080:intron 35.0%
! GAACTATATGGATTTTGTGC+AGG + tig0035026:26137-26156 Msa1454080:five_prime_UTR 35.0%
!! CTAATGGTGATATTGACTTG+GGG + tig0035026:26230-26249 Msa1454080:intron 35.0%
TAGATATACCTGTCATCCAT+GGG - tig0035026:26309-26328 Msa1454080:intergenic 35.0%
ATAGATATACCTGTCATCCA+TGG - tig0035026:26310-26329 Msa1454080:intergenic 35.0%
! AAGATAGAATGAAAGCATGC+AGG - tig0035026:26349-26368 Msa1454080:intergenic 35.0%
TTATTAGGGATGCATTAGCT+AGG - tig0035026:26626-26645 Msa1454080:intergenic 35.0%
TCAACATGCTGCAGTTATTA+GGG - tig0035026:26640-26659 Msa1454080:intergenic 35.0%
ATCAACATGCTGCAGTTATT+AGG - tig0035026:26641-26660 Msa1454080:intergenic 35.0%
! TAAGGATATTCCTTTTCACC+TGG - tig0035026:26836-26855 Msa1454080:intergenic 35.0%
CCAGTAAACCTAAAGAGAAT+TGG - tig0035026:26879-26898 Msa1454080:intergenic 35.0%
! CCAATTCTCTTTAGGTTTAC+TGG + tig0035026:26876-26895 Msa1454080:intron 35.0%
!! CTGTTTCTATTTGCATTCTC+AGG + tig0035026:26916-26935 Msa1454080:intron 35.0%
AATGACTACTGGGAAGATAT+TGG + tig0035026:26950-26969 Msa1454080:CDS 35.0%
! GCCAAATTTTGCATCAAAGA+AGG - tig0035026:26987-27006 Msa1454080:intergenic 35.0%
CCATGCAAAACAGTTTGAAT+TGG - tig0035026:27105-27124 Msa1454080:intergenic 35.0%
! CCAATTCAAACTGTTTTGCA+TGG + tig0035026:27102-27121 Msa1454080:intron 35.0%
AGATGGAAATATTCAGCATG+AGG + tig0035026:27206-27225 Msa1454080:intron 35.0%
TTTCTACTTTAGTAGGTGGT+AGG - tig0035026:27479-27498 Msa1454080:intergenic 35.0%
CAAATTCCCTTGTAAAAGCT+GGG - tig0035026:27518-27537 Msa1454080:intergenic 35.0%
ACAAATTCCCTTGTAAAAGC+TGG - tig0035026:27519-27538 Msa1454080:intergenic 35.0%
TGTGGATGCAATTATTCTCA+CGG + tig0035026:27612-27631 Msa1454080:CDS 35.0%
TACTGACCGATGACTAAAAA+CGG + tig0035026:27804-27823 Msa1454080:intron 35.0%
CAAAGTGCGAGATAGAGAAA+TGG - tig0035026:24061-24080 None:intergenic 40.0%
ACCAGAAACAGTGTGTTCTT+AGG + tig0035026:24271-24290 Msa1454080:five_prime_UTR 40.0%
ACCTAAGAACACACTGTTTC+TGG - tig0035026:24275-24294 Msa1454080:intergenic 40.0%
GTTCTTAGGTGAAACTACCA+AGG + tig0035026:24285-24304 Msa1454080:five_prime_UTR 40.0%
TGTTGTGCTTAAACTTCCCT+TGG - tig0035026:24305-24324 Msa1454080:intergenic 40.0%
AACACAACGTTCTCACTTCA+GGG + tig0035026:24375-24394 Msa1454080:five_prime_UTR 40.0%
!!! ACACTTTTTGGGTCTGCTTT+TGG - tig0035026:24538-24557 Msa1454080:intergenic 40.0%
TGTAGCTTCAATCATTTGGG+TGG + tig0035026:24555-24574 Msa1454080:five_prime_UTR 40.0%
!! TTGGCTCTTTTGCTAGTAAG+AGG - tig0035026:24603-24622 Msa1454080:intergenic 40.0%
GTAGTGGTTGCAATTGCATT+AGG + tig0035026:24696-24715 Msa1454080:intron 40.0%
GATTCTCTCTAGTGCCAATT+TGG - tig0035026:24888-24907 Msa1454080:intergenic 40.0%
! ATTTTGCAGGTTCCAATTGG+AGG + tig0035026:25239-25258 Msa1454080:intron 40.0%
! TTTTGCAGGTTCCAATTGGA+GGG + tig0035026:25240-25259 Msa1454080:intron 40.0%
CTGTTGATGCAATTGCTCAT+AGG - tig0035026:25287-25306 Msa1454080:intergenic 40.0%
ATGAGCAATTGCATCAACAG+TGG + tig0035026:25287-25306 Msa1454080:five_prime_UTR 40.0%
TCTTGAGAATAGCTAGTGTC+AGG + tig0035026:26040-26059 Msa1454080:intron 40.0%
! CATCCCACTTTATTTGCTAG+AGG + tig0035026:26380-26399 Msa1454080:intron 40.0%
CTGCCTCTAGCAAATAAAGT+GGG - tig0035026:26386-26405 Msa1454080:intergenic 40.0%
TCTGCCTCTAGCAAATAAAG+TGG - tig0035026:26387-26406 Msa1454080:intergenic 40.0%
TGTAGTCGAGCATCAGATTA+TGG + tig0035026:26441-26460 Msa1454080:intron 40.0%
GTAGTCGAGCATCAGATTAT+GGG + tig0035026:26442-26461 Msa1454080:intron 40.0%
GCTTTCAAATCTGATCCCTT+GGG - tig0035026:26516-26535 Msa1454080:intergenic 40.0%
TGCTTTCAAATCTGATCCCT+TGG - tig0035026:26517-26536 Msa1454080:intergenic 40.0%
GGGATCAGATTTGAAAGCAA+TGG + tig0035026:26518-26537 Msa1454080:five_prime_UTR 40.0%
CATGTTGATACCACAGTTCT+GGG + tig0035026:26652-26671 Msa1454080:five_prime_UTR 40.0%
ATGTTGATACCACAGTTCTG+GGG + tig0035026:26653-26672 Msa1454080:five_prime_UTR 40.0%
ACATCCATATATTGCGTCCA+TGG + tig0035026:26698-26717 Msa1454080:exon 40.0%
CATCCATATATTGCGTCCAT+GGG + tig0035026:26699-26718 Msa1454080:exon 40.0%
TCGAAACACATAAACACCCA+TGG - tig0035026:26718-26737 Msa1454080:intergenic 40.0%
GGTTCTACATGCAATGACTT+TGG + tig0035026:26771-26790 Msa1454080:CDS 40.0%
TGCATCAAAGAAGGACTCTA+TGG - tig0035026:26978-26997 Msa1454080:intergenic 40.0%
GTCATGCTCTGTGACTATAA+TGG + tig0035026:27072-27091 Msa1454080:CDS 40.0%
TTCAACTACAAGCAAGTCGT+AGG + tig0035026:27132-27151 Msa1454080:intron 40.0%
TATGCAAATTTCTGCAGACC+TGG + tig0035026:27234-27253 Msa1454080:intron 40.0%
ATTACTTGTGCCATACTTGC+AGG + tig0035026:27398-27417 Msa1454080:intron 40.0%
!!! AATTTTGGAGCCTGCAAGTA+TGG - tig0035026:27411-27430 Msa1454080:intergenic 40.0%
!! GAAGTGAAGAAAGGTGTCTT+TGG - tig0035026:27447-27466 Msa1454080:intergenic 40.0%
TTAGTAGGTGGTAGGAATCT+CGG - tig0035026:27471-27490 Msa1454080:intergenic 40.0%
! TATTGCACCCAGCTTTTACA+AGG + tig0035026:27508-27527 Msa1454080:intron 40.0%
! ATTGCACCCAGCTTTTACAA+GGG + tig0035026:27509-27528 Msa1454080:intron 40.0%
GCTGAATATGAGTGCTTCAT+TGG + tig0035026:27539-27558 Msa1454080:intron 40.0%
! ATACGATCACGTTTAGAGTC+TGG + tig0035026:27678-27697 Msa1454080:CDS 40.0%
! AGTAGAAGAGCACAAACTAC+GGG - tig0035026:27788-27807 Msa1454080:intergenic 40.0%
! CAGTAGAAGAGCACAAACTA+CGG - tig0035026:27789-27808 Msa1454080:intergenic 40.0%
AGTAATCAGCACCATCATCA+TGG - tig0035026:27921-27940 Msa1454080:intergenic 40.0%
! GTATTTTCTCCAACACCAAC+GGG - tig0035026:27990-28009 Msa1454080:intergenic 40.0%
! GGTATTTTCTCCAACACCAA+CGG - tig0035026:27991-28010 Msa1454080:intergenic 40.0%
CGTTGTGTTCAGCTCCATTT+GGG - tig0035026:24364-24383 Msa1454080:intergenic 45.0%
ACGTTGTGTTCAGCTCCATT+TGG - tig0035026:24365-24384 Msa1454080:intergenic 45.0%
GAACACAACGTTCTCACTTC+AGG + tig0035026:24374-24393 Msa1454080:five_prime_UTR 45.0%
AGCTTCAATCATTTGGGTGG+TGG + tig0035026:24558-24577 Msa1454080:five_prime_UTR 45.0%
TAGCAAAAGAGCCAAACCTG+CGG + tig0035026:24608-24627 Msa1454080:five_prime_UTR 45.0%
GCTAAATAGCCCACCCAAAT+TGG + tig0035026:24871-24890 Msa1454080:intron 45.0%
TCTCTAGTGCCAATTTGGGT+GGG - tig0035026:24883-24902 Msa1454080:intergenic 45.0%
GAAAAAGACATGACCCTGCA+TGG - tig0035026:25138-25157 Msa1454080:intergenic 45.0%
AGTCTGTAACACCCTCCAAT+TGG - tig0035026:25254-25273 Msa1454080:intergenic 45.0%
! TTGTCTCGCGCCTACAATTT+TGG + tig0035026:25365-25384 Msa1454080:five_prime_UTR 45.0%
!! GAAAGTCTCACTTTTGGGGA+GGG + tig0035026:25387-25406 Msa1454080:five_prime_UTR 45.0%
! CACTGTTTAAAACGCAGCGT+AGG + tig0035026:25436-25455 Msa1454080:intron 45.0%
ATGGCTGCAACTCAAACATC+TGG + tig0035026:25555-25574 Msa1454080:five_prime_UTR 45.0%
ACTCAAACATCTGGAGAAGC+TGG + tig0035026:25564-25583 Msa1454080:five_prime_UTR 45.0%
CTCAAACATCTGGAGAAGCT+GGG + tig0035026:25565-25584 Msa1454080:five_prime_UTR 45.0%
ATGTGTCAGGATTGTCTCAC+AGG + tig0035026:25892-25911 Msa1454080:intron 45.0%
TAGTGTCAGGATTGTCTCAC+AGG + tig0035026:26053-26072 Msa1454080:intron 45.0%
ACAGTTTGCAGAAAAGCCCA+AGG + tig0035026:26497-26516 Msa1454080:five_prime_UTR 45.0%
CAGTTTGCAGAAAAGCCCAA+GGG + tig0035026:26498-26517 Msa1454080:five_prime_UTR 45.0%
GCATGTTGATACCACAGTTC+TGG + tig0035026:26651-26670 Msa1454080:intron 45.0%
ACACCCATGGACGCAATATA+TGG - tig0035026:26705-26724 Msa1454080:intergenic 45.0%
AATCTCGGGGAAGTGAAGAA+AGG - tig0035026:27456-27475 Msa1454080:intergenic 45.0%
TAGTAGGTGGTAGGAATCTC+GGG - tig0035026:27470-27489 Msa1454080:intergenic 45.0%
ATTCTCACGGTTGCTTCTTG+AGG + tig0035026:27625-27644 Msa1454080:CDS 45.0%
TTCTCACGGTTGCTTCTTGA+GGG + tig0035026:27626-27645 Msa1454080:CDS 45.0%
! ATCACGTTTAGAGTCTGGTG+TGG + tig0035026:27683-27702 Msa1454080:CDS 45.0%
!!! GGTGTGCCGTTTTTAGTCAT+CGG - tig0035026:27813-27832 Msa1454080:intergenic 45.0%
! GTCTGAAATTGCATCTCTGC+TGG + tig0035026:27951-27970 Msa1454080:CDS 45.0%
! AATCATTTGGGTGGTGGTGC+TGG + tig0035026:24564-24583 Msa1454080:five_prime_UTR 50.0%
CTCTCTAGTGCCAATTTGGG+TGG - tig0035026:24884-24903 Msa1454080:intergenic 50.0%
GAATCGAACCTGAGACCTTG+CGG + tig0035026:24903-24922 Msa1454080:intron 50.0%
!! TAACCCACTTGGGTTGGCTT+GGG - tig0035026:24958-24977 Msa1454080:intergenic 50.0%
!! TTAACCCACTTGGGTTGGCT+TGG - tig0035026:24959-24978 Msa1454080:intergenic 50.0%
!! GGAAAGTCTCACTTTTGGGG+AGG + tig0035026:25386-25405 Msa1454080:five_prime_UTR 50.0%
!! CACTTTTGGGGAGGGTTTTG+TGG + tig0035026:25395-25414 Msa1454080:five_prime_UTR 50.0%
!! TTTTGGGGAGGGTTTTGTGG+AGG + tig0035026:25398-25417 Msa1454080:five_prime_UTR 50.0%
CTGGAGAAGCTGGGAAGAAA+TGG + tig0035026:25574-25593 Msa1454080:five_prime_UTR 50.0%
GCTGGGAAGAAATGGTTCCA+AGG + tig0035026:25582-25601 Msa1454080:five_prime_UTR 50.0%
TCACAGCATCAGCTGTTCCT+TGG - tig0035026:25602-25621 Msa1454080:intergenic 50.0%
AAGGAACAGCTGATGCTGTG+AGG + tig0035026:25601-25620 Msa1454080:five_prime_UTR 50.0%
TCACAGTTCGTGTCTTCCCA+TGG + tig0035026:26290-26309 Msa1454080:five_prime_UTR 50.0%
CTTGAGATACCCCAGAACTG+TGG - tig0035026:26665-26684 Msa1454080:intergenic 50.0%
GTTTCGAACTGAGACCCTAC+TGG + tig0035026:26731-26750 Msa1454080:CDS 50.0%
ATCATCCCATCTGCTGTCAG+TGG + tig0035026:26801-26820 Msa1454080:CDS 50.0%
TCATCCCATCTGCTGTCAGT+GGG + tig0035026:26802-26821 Msa1454080:CDS 50.0%
GGCACAATGTCCAGGTGAAA+AGG + tig0035026:26823-26842 Msa1454080:intron 50.0%
AGTAGGTGGTAGGAATCTCG+GGG - tig0035026:27469-27488 Msa1454080:intergenic 50.0%
ATTGCATCTCTGCTGGCAGA+AGG + tig0035026:27958-27977 Msa1454080:CDS 50.0%
ATCTCTGCTGGCAGAAGGAA+AGG + tig0035026:27963-27982 Msa1454080:CDS 50.0%
TCTCTGCTGGCAGAAGGAAA+GGG + tig0035026:27964-27983 Msa1454080:CDS 50.0%
!! CTTGGGTTGGCTTGGGTCTT+GGG - tig0035026:24951-24970 Msa1454080:intergenic 55.0%
!! ACTTGGGTTGGCTTGGGTCT+TGG - tig0035026:24952-24971 Msa1454080:intergenic 55.0%
AAGACCCAAGCCAACCCAAG+TGG + tig0035026:24951-24970 Msa1454080:intron 55.0%
AGACCCAAGCCAACCCAAGT+GGG + tig0035026:24952-24971 Msa1454080:intron 55.0%
TGTAGGCGCGAGACAAGTGA+CGG - tig0035026:25361-25380 Msa1454080:intergenic 55.0%
CGTGTCTTCCCATGGATGAC+AGG + tig0035026:26298-26317 Msa1454080:five_prime_UTR 55.0%
TGTGCCCACTGACAGCAGAT+GGG - tig0035026:26809-26828 Msa1454080:intergenic 55.0%
TTGTGCCCACTGACAGCAGA+TGG - tig0035026:26810-26829 Msa1454080:intergenic 55.0%
TGTCAGTGGGCACAATGTCC+AGG + tig0035026:26815-26834 Msa1454080:CDS 55.0%
AGAGTCTGGTGTGGAGCTTC+AGG + tig0035026:27692-27711 Msa1454080:CDS 55.0%
CAAGGTCTCCGCAAGGTCTC+AGG - tig0035026:24914-24933 Msa1454080:intergenic 60.0%
GAGACCTTGCGGAGACCTTG+CGG + tig0035026:24914-24933 Msa1454080:intron 60.0%
AGGAAAGGGCCCGTTGGTGT+TGG + tig0035026:27978-27997 Msa1454080:CDS 60.0%
ACCTTGCGGAGACCTTGCGG+AGG + tig0035026:24917-24936 Msa1454080:intron 65.0%
TCCTCCGCAAGGTCTCCGCA+AGG - tig0035026:24921-24940 Msa1454080:intergenic 65.0%
! TGGGAGTGTGCTCCTCCGCA+AGG - tig0035026:24932-24951 Msa1454080:intergenic 65.0%
GGCAGAAGGAAAGGGCCCGT+TGG + tig0035026:27972-27991 Msa1454080:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0035026 gene 23965 28017 23965 ID=Msa1454080;Name=Msa1454080
tig0035026 mRNA 23965 28017 23965 ID=Msa1454080-mRNA-1;Parent=Msa1454080;Name=Msa1454080-mRNA-1;_AED=0.18;_eAED=0.18;_QI=1144|0.72|0.66|1|0.81|0.83|12|0|220
tig0035026 exon 23965 24421 23965 ID=Msa1454080-mRNA-1:exon:19500;Parent=Msa1454080-mRNA-1
tig0035026 exon 24505 24629 24505 ID=Msa1454080-mRNA-1:exon:19501;Parent=Msa1454080-mRNA-1
tig0035026 exon 25248 25419 25248 ID=Msa1454080-mRNA-1:exon:19502;Parent=Msa1454080-mRNA-1
tig0035026 exon 25553 25644 25553 ID=Msa1454080-mRNA-1:exon:19503;Parent=Msa1454080-mRNA-1
tig0035026 exon 26075 26158 26075 ID=Msa1454080-mRNA-1:exon:19504;Parent=Msa1454080-mRNA-1
tig0035026 exon 26265 26319 26265 ID=Msa1454080-mRNA-1:exon:19505;Parent=Msa1454080-mRNA-1
tig0035026 exon 26446 26539 26446 ID=Msa1454080-mRNA-1:exon:19506;Parent=Msa1454080-mRNA-1
tig0035026 exon 26652 26836 26652 ID=Msa1454080-mRNA-1:exon:19507;Parent=Msa1454080-mRNA-1
tig0035026 exon 26938 27093 26938 ID=Msa1454080-mRNA-1:exon:19508;Parent=Msa1454080-mRNA-1
tig0035026 exon 27420 27506 27420 ID=Msa1454080-mRNA-1:exon:19509;Parent=Msa1454080-mRNA-1
tig0035026 exon 27588 27713 27588 ID=Msa1454080-mRNA-1:exon:19510;Parent=Msa1454080-mRNA-1
tig0035026 exon 27847 28017 27847 ID=Msa1454080-mRNA-1:exon:19511;Parent=Msa1454080-mRNA-1
tig0035026 five_prime_UTR 23965 24421 23965 ID=Msa1454080-mRNA-1:five_prime_utr;Parent=Msa1454080-mRNA-1
tig0035026 five_prime_UTR 24505 24629 24505 ID=Msa1454080-mRNA-1:five_prime_utr;Parent=Msa1454080-mRNA-1
tig0035026 five_prime_UTR 25248 25419 25248 ID=Msa1454080-mRNA-1:five_prime_utr;Parent=Msa1454080-mRNA-1
tig0035026 five_prime_UTR 25553 25644 25553 ID=Msa1454080-mRNA-1:five_prime_utr;Parent=Msa1454080-mRNA-1
tig0035026 five_prime_UTR 26075 26158 26075 ID=Msa1454080-mRNA-1:five_prime_utr;Parent=Msa1454080-mRNA-1
tig0035026 five_prime_UTR 26265 26319 26265 ID=Msa1454080-mRNA-1:five_prime_utr;Parent=Msa1454080-mRNA-1
tig0035026 five_prime_UTR 26446 26539 26446 ID=Msa1454080-mRNA-1:five_prime_utr;Parent=Msa1454080-mRNA-1
tig0035026 five_prime_UTR 26652 26716 26652 ID=Msa1454080-mRNA-1:five_prime_utr;Parent=Msa1454080-mRNA-1
tig0035026 CDS 26717 26836 26717 ID=Msa1454080-mRNA-1:cds;Parent=Msa1454080-mRNA-1
tig0035026 CDS 26938 27093 26938 ID=Msa1454080-mRNA-1:cds;Parent=Msa1454080-mRNA-1
tig0035026 CDS 27420 27506 27420 ID=Msa1454080-mRNA-1:cds;Parent=Msa1454080-mRNA-1
tig0035026 CDS 27588 27713 27588 ID=Msa1454080-mRNA-1:cds;Parent=Msa1454080-mRNA-1
tig0035026 CDS 27847 28017 27847 ID=Msa1454080-mRNA-1:cds;Parent=Msa1454080-mRNA-1
Gene Sequence

>Msa1454080

ATGGGTGTTTATGTGTTTCGAACTGAGACCCTACTGGAACTATTAAAATTGAATGGTTCTACATGCAATGACTTTGGATCTGAAATCATCCCATCTGCTGTCAGTGGGCACAATGTCCAGGCATTTTTGTTCAATGACTACTGGGAAGATATTGGAACCATAGAGTCCTTCTTTGATGCAAAATTTGGCCCTAACAGAACCTGTATGTTTAAACTATCCTGTAACTTATTTGTATTTAGGTTCATATTCTCAAGGTCATGCTCTGTGACTATAATGGCTCCAAAATTTCAATTCTATGATCCAAAGACACCTTTCTTCACTTCCCCGAGATTCCTACCACCTACTAAAGTAGAAAAATGCAAGAATGATAAATTGGTTTCAATAGATTGTGGATGCAATTATTCTCACGGTTGCTTCTTGAGGGAGTGTAGTGTTCAACATTCTATTGTTGGAATACGATCACGTTTAGAGTCTGGTGTGGAGCTTCAGCTAATTGTTTTGATTCCTTTTCATCTTCTATTTGGTATATGCCTTCTTAATGGATTCTGCAATTTAGGATACCATGATGATGGTGCTGATTACTATCAAACTGAGTCTGAAATTGCATCTCTGCTGGCAGAAGGAAAGGGCCCGTTGGTGTTGGAGAAAATACCAAAATCA
Protein sequence

>Msa1454080

MGVYVFRTETLLELLKLNGSTCNDFGSEIIPSAVSGHNVQAFLFNDYWEDIGTIESFFDAKFGPNRTCMFKLSCNLFVFRFIFSRSCSVTIMAPKFQFYDPKTPFFTSPRFLPPTKVEKCKNDKLVSIDCGCNYSHGCFLRECSVQHSIVGIRSRLESGVELQLIVLIPFHLLFGICLLNGFCNLGYHDDGADYYQTESEIASLLAEGKGPLVLEKIPKS