AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0410500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0410500 MtrunA17_Chr3g0111661 97.656 640 14 1 1 639 1 640 0.0 1281
Msa0410500 MtrunA17_Chr5g0435301 64.165 653 214 6 5 639 472 1122 0.0 829
Msa0410500 MtrunA17_Chr5g0435301 57.407 108 45 1 4 110 231 338 1.56e-30 128
Msa0410500 MtrunA17_Chr5g0435301 50.000 138 52 4 1 127 117 248 1.62e-29 125
Msa0410500 MtrunA17_Chr5g0435301 52.542 118 53 2 2 116 350 467 2.88e-29 124
Msa0410500 MtrunA17_Chr5g0435301 55.963 109 46 2 1 108 1 108 3.80e-28 120
Msa0410500 MtrunA17_Chr4g0001231 43.040 625 326 11 22 637 22 625 5.78e-162 478
Msa0410500 MtrunA17_Chr4g0074301 42.289 629 335 9 19 637 19 629 2.11e-160 474
Msa0410500 MtrunA17_Chr4g0070931 42.472 631 331 10 19 637 19 629 1.90e-158 469
Msa0410500 MtrunA17_Chr2g0328251 37.951 693 350 14 13 637 10 690 6.36e-136 413
Msa0410500 MtrunA17_Chr2g0328241 39.602 654 333 12 34 637 33 674 8.34e-130 397
Msa0410500 MtrunA17_Chr4g0024031 35.022 671 332 13 34 637 33 666 1.01e-113 355
Msa0410500 MtrunA17_Chr2g0327251 38.757 547 265 8 110 637 69 564 1.42e-105 331
Msa0410500 MtrunA17_Chr3g0111741 59.259 216 85 2 425 637 123 338 1.70e-72 238
Msa0410500 MtrunA17_Chr4g0071151 50.775 258 96 4 398 636 3 248 5.28e-71 230
Msa0410500 MtrunA17_Chr2g0328231 38.243 387 175 7 282 637 9 362 1.59e-63 214
Msa0410500 MtrunA17_Chr3g0111731 54.867 226 85 4 417 637 1 214 1.45e-62 207
Msa0410500 MtrunA17_Chr4g0074271 34.646 381 214 5 19 398 36 382 4.28e-59 205
Msa0410500 MtrunA17_Chr4g0074271 48.529 68 35 0 563 630 381 448 2.98e-14 75.5
Msa0410500 MtrunA17_Chr3g0111691 56.757 74 30 1 566 637 17 90 4.71e-20 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0410500 AT3G48670.2 56.051 628 269 3 16 638 21 646 0.0 706
Msa0410500 AT3G48670.1 56.051 628 269 3 16 638 21 646 0.0 706
Msa0410500 AT3G48670.3 56.051 628 269 3 16 638 21 646 0.0 706
Msa0410500 AT3G12550.5 50.627 638 299 7 13 638 2 635 0.0 625
Msa0410500 AT3G12550.4 50.548 639 299 7 13 638 2 636 0.0 625
Msa0410500 AT3G12550.2 50.548 639 299 7 13 638 2 636 0.0 625
Msa0410500 AT3G12550.1 50.548 639 299 7 13 638 2 636 0.0 625
Msa0410500 AT3G12550.3 49.647 566 270 6 13 567 2 563 0.0 542
Msa0410500 AT1G15910.1 39.641 613 361 7 18 628 17 622 1.50e-143 431
Msa0410500 AT4G00380.1 40.033 612 359 6 19 628 18 623 9.74e-143 429
Msa0410500 AT4G00380.3 40.033 612 359 6 19 628 18 623 9.74e-143 429
Msa0410500 AT1G13790.2 41.822 538 294 5 99 632 204 726 1.21e-136 417
Msa0410500 AT1G13790.2 46.341 82 43 1 12 93 3 83 1.15e-14 78.2
Msa0410500 AT1G13790.1 41.822 538 294 5 99 632 204 726 1.21e-136 417
Msa0410500 AT1G13790.1 46.341 82 43 1 12 93 3 83 1.15e-14 78.2
Msa0410500 AT4G00380.2 37.908 612 344 6 19 628 18 595 6.49e-132 400
Msa0410500 AT1G80790.1 39.739 614 356 11 19 628 19 622 3.39e-130 397
Msa0410500 AT1G80790.2 39.739 614 356 11 19 628 19 622 3.39e-130 397
Msa0410500 AT5G59390.2 38.686 548 319 6 89 629 1 538 3.37e-126 384
Msa0410500 AT5G59390.4 38.686 548 319 6 89 629 1 538 3.37e-126 384
Msa0410500 AT5G59390.3 38.686 548 319 6 89 629 1 538 3.37e-126 384
Msa0410500 AT5G59390.1 38.336 553 319 7 89 629 1 543 7.83e-124 378
Msa0410500 AT5G59390.5 38.336 553 319 7 89 629 1 543 7.83e-124 378
Msa0410500 AT4G01780.1 42.248 516 169 7 128 638 80 471 2.77e-121 369
Msa0410500 AT4G01180.1 37.338 541 300 8 108 629 18 538 1.72e-113 351
Msa0410500 AT1G80790.3 37.037 459 277 9 19 475 19 467 1.37e-83 271
Msa0410500 AT3G29375.3 40.299 201 111 3 442 638 33 228 7.82e-38 140
Msa0410500 AT3G29375.1 40.796 201 110 3 442 638 156 351 2.31e-36 140
Msa0410500 AT3G29375.2 39.316 117 65 2 442 557 33 144 1.16e-15 75.9

Find 154 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCTTTAGTGAAATATT+TGG 0.147850 3_2:-52136844 Msa0410500:CDS
CTCAATAATGTTGGTCAAAT+TGG 0.163099 3_2:+52136299 None:intergenic
CACAAGATGGGCGTGCTGTT+GGG 0.229647 3_2:-52136677 Msa0410500:CDS
GACGAGGTTCTGAAAATATT+AGG 0.230854 3_2:+52138282 None:intergenic
GGGCTAGTGGTTCCAAGCTT+AGG 0.267461 3_2:-52136656 Msa0410500:CDS
TGTCATAGCAGAATTCATTT+TGG 0.267704 3_2:+52136224 None:intergenic
CACAGAGGATTGACTCGATA+TGG 0.273116 3_2:+52136606 None:intergenic
GGTTTGCAGCTCTACAAATA+TGG 0.283988 3_2:+52130959 None:intergenic
CTCTCTTCAGATGGCTTCTC+TGG 0.291092 3_2:-52134598 Msa0410500:CDS
ACTTTGAATGGATGCCAATC+TGG 0.306475 3_2:+52133450 None:intergenic
AATTGGAAGTAGAAGGAAAA+TGG 0.320820 3_2:+52138192 None:intergenic
CCATTCTCTTCACACCAATA+TGG 0.337100 3_2:+52133586 None:intergenic
GAACTCCTGCAACATGCTTC+TGG 0.341030 3_2:-52136918 Msa0410500:CDS
ATCAGACCATCACGGGAAAA+AGG 0.341544 3_2:-52136490 Msa0410500:CDS
CTGGAGATTCAGCAACTAAA+AGG 0.346899 3_2:-52134352 Msa0410500:CDS
ATGAGCAGTTTGTTTGGCCT+TGG 0.350970 3_2:-52136734 Msa0410500:CDS
TTGTATTTCAGGTGGTATAA+AGG 0.352840 3_2:-52137127 Msa0410500:intron
ACGAGGTTCTGAAAATATTA+GGG 0.361549 3_2:+52138283 None:intergenic
AATTTATGATCATGTTAAAC+TGG 0.362350 3_2:-52130908 Msa0410500:three_prime_UTR
GCTTGTTCTTCCTGAAGTTC+AGG 0.365310 3_2:+52136345 None:intergenic
CAAAACCATACCTGAACTTC+AGG 0.366653 3_2:-52136355 Msa0410500:CDS
GCACAAGATGGGCGTGCTGT+TGG 0.374639 3_2:-52136678 Msa0410500:CDS
GAAGGTAGATGATTTGCATA+TGG 0.376492 3_2:-52134275 Msa0410500:CDS
AGATATAAATGTTATGAAAC+TGG 0.377193 3_2:-52134562 Msa0410500:CDS
GGCTAGTGGTTCCAAGCTTA+GGG 0.377913 3_2:-52136655 Msa0410500:CDS
AAGAGAAAAGGCTACTCATT+TGG 0.397330 3_2:-52136862 Msa0410500:CDS
CCACGCCAGAAGCATGTTGC+AGG 0.399060 3_2:+52136913 None:intergenic
TGATTTGCATATGGGTTTGA+GGG 0.400254 3_2:-52134266 Msa0410500:CDS
GCTCCTTGATGATTAGTGTT+TGG 0.402887 3_2:+52134206 None:intergenic
ATTCTGATGAGCAGTTTGTT+TGG 0.414097 3_2:-52136740 Msa0410500:CDS
TTCAAAGTTGTCATGATTGA+AGG 0.425294 3_2:-52133435 Msa0410500:CDS
TGCCGTGGTGGCATCTTTAA+CGG 0.426193 3_2:-52132207 Msa0410500:CDS
ATGATTTGCATATGGGTTTG+AGG 0.426345 3_2:-52134267 Msa0410500:CDS
TTGTAGGGCATTAAAGATAT+AGG 0.427673 3_2:-52133618 Msa0410500:intron
TCAATCATGACAACTTTGAA+TGG 0.430213 3_2:+52133438 None:intergenic
TAGTTAATATTCCCACTAGC+AGG 0.431817 3_2:-52136701 Msa0410500:CDS
GAAGAGAAAGCCAAGAGAAA+AGG 0.432830 3_2:-52136874 Msa0410500:CDS
ACAAGATGGGCGTGCTGTTG+GGG 0.435201 3_2:-52136676 Msa0410500:CDS
CGAAAAGCTTAAGTCGCAAC+TGG 0.436034 3_2:-52135692 Msa0410500:CDS
CAGTTTGTTTGGCCTTGGAT+TGG 0.436617 3_2:-52136729 Msa0410500:CDS
TTTAGTGAAATATTTGGAAA+AGG 0.437782 3_2:-52136838 Msa0410500:CDS
TTATGCACAACCTTAATCTT+CGG 0.440589 3_2:+52130938 None:intergenic
TATGAAACAAAAGCTGGAAC+TGG 0.443041 3_2:-52134371 Msa0410500:CDS
CATATTGGTGTGAAGAGAAT+GGG 0.444902 3_2:-52133585 Msa0410500:CDS
AAGAAAGTTGCTAGAAGAGA+TGG 0.445164 3_2:-52135596 Msa0410500:CDS
GATATGTAACCTCAGAGTTA+TGG 0.447168 3_2:-52132157 Msa0410500:CDS
GAGCTGCAAACCGAAGATTA+AGG 0.454519 3_2:-52130948 Msa0410500:three_prime_UTR
AAGGTAGATGATTTGCATAT+GGG 0.455418 3_2:-52134274 Msa0410500:CDS
TTCTTCCTGAAGTTCAGGTA+TGG 0.459017 3_2:+52136350 None:intergenic
CCCATCTTGTGCCCTGCTAG+TGG 0.460385 3_2:+52136689 None:intergenic
AATAATTTGTGCATGGCGGC+TGG 0.461442 3_2:-52130993 Msa0410500:three_prime_UTR
TTCAGAACTATGTTCATTGT+GGG 0.462202 3_2:-52133490 Msa0410500:CDS
CCATATTGGTGTGAAGAGAA+TGG 0.462918 3_2:-52133586 Msa0410500:CDS
TGGTGAATATCTGCGAAAGA+TGG 0.472008 3_2:-52136385 Msa0410500:CDS
CAATTTGACCAACATTATTG+AGG 0.472553 3_2:-52136298 Msa0410500:CDS
AAGTAGAAGGAAAATGGATC+TGG 0.472707 3_2:+52138198 None:intergenic
GGGCGTGCTGTTGGGGCTAG+TGG 0.472779 3_2:-52136669 Msa0410500:CDS
CGAAGTCGGGTCTTTATGCA+TGG 0.478600 3_2:-52136446 Msa0410500:CDS
CTCATTCAAGCTTATAATGA+AGG 0.478873 3_2:-52136189 Msa0410500:intron
AGTATCTAAAAGACCCAGAT+TGG 0.483392 3_2:-52133464 Msa0410500:CDS
GTTAATACAGAGCCGAAGTC+GGG 0.485220 3_2:-52136459 Msa0410500:CDS
TGCGAGTGCATTATCTAAGC+CGG 0.491644 3_2:+52136530 None:intergenic
GTTGCTAGAAGAGATGGAGG+AGG 0.492303 3_2:-52135590 Msa0410500:intron
CTGTCCTAAGAAAAGAAAAC+GGG 0.493609 3_2:-52136955 Msa0410500:CDS
AAAGTTGCTAGAAGAGATGG+AGG 0.496394 3_2:-52135593 Msa0410500:CDS
ACTGTCCTAAGAAAAGAAAA+CGG 0.497895 3_2:-52136956 Msa0410500:CDS
CTGCAACATGCTTCTGGCGT+GGG 0.497901 3_2:-52136912 Msa0410500:CDS
CCGTTATCAGTTGGTTCCGA+TGG 0.498274 3_2:+52136795 None:intergenic
CCTTTGTATCATCTCTAGCA+TGG 0.499850 3_2:-52130825 Msa0410500:three_prime_UTR
TGTTATGAAGAACTGAAAAG+TGG 0.504332 3_2:-52137023 Msa0410500:CDS
GGAGAGCAACTTTGCAAGAA+GGG 0.504349 3_2:-52132118 Msa0410500:CDS
CTTCAGAACTATGTTCATTG+TGG 0.507293 3_2:-52133491 Msa0410500:CDS
CTTTGAATGGATGCCAATCT+GGG 0.508070 3_2:+52133451 None:intergenic
GAGAAAAGAAGTGGGTGAAA+AGG 0.509744 3_2:-52132237 Msa0410500:CDS
TTCTGAGATAAGTGAGTATG+AGG 0.511412 3_2:-52137051 Msa0410500:CDS
TTCTTCATAGCTTCAAGGAA+CGG 0.513496 3_2:+52133546 None:intergenic
CCTGCAACATGCTTCTGGCG+TGG 0.514154 3_2:-52136913 Msa0410500:CDS
CATGATTGAAGGGAAAGAAA+AGG 0.514995 3_2:-52133424 Msa0410500:intron
GACTGCTGGAAACGCAAGAA+AGG 0.519712 3_2:-52132080 Msa0410500:CDS
TCTATACTCATCCCTAAGCT+TGG 0.519914 3_2:+52136644 None:intergenic
TGGAATTTCCGAGGTCACTC+TGG 0.520278 3_2:-52136585 Msa0410500:CDS
GCATATGGGTTTGAGGGAGA+AGG 0.522543 3_2:-52134260 Msa0410500:CDS
CCATCGGAACCAACTGATAA+CGG 0.523052 3_2:-52136795 Msa0410500:CDS
ACTGATAACGGTGCTGATAA+CGG 0.523153 3_2:-52136783 Msa0410500:CDS
TTGTGGAATTCTATAAAGAC+TGG 0.524884 3_2:-52136554 Msa0410500:CDS
TATGAAGAAAAGATATAATG+AGG 0.526790 3_2:-52133532 Msa0410500:CDS
CCATGCACAAATTATTCTCT+CGG 0.526826 3_2:+52131000 None:intergenic
CCACTAGCAGGGCACAAGAT+GGG 0.531363 3_2:-52136689 Msa0410500:CDS
GGTGAATATCTGCGAAAGAT+GGG 0.536287 3_2:-52136384 Msa0410500:CDS
CCATCTTGTGCCCTGCTAGT+GGG 0.536337 3_2:+52136690 None:intergenic
ATAGGTACTCGAGTCCATAT+TGG 0.536518 3_2:-52133600 Msa0410500:CDS
ATTAATGAATATAATCCTAG+TGG 0.537739 3_2:-52132182 Msa0410500:CDS
CATATGCATCAGACCATCAC+GGG 0.537748 3_2:-52136497 Msa0410500:CDS
TCAAAGTTGTCATGATTGAA+GGG 0.539832 3_2:-52133434 Msa0410500:CDS
CCCACTAGCAGGGCACAAGA+TGG 0.540992 3_2:-52136690 Msa0410500:CDS
GAGAAATAGCTCTCTTCAGA+TGG 0.542142 3_2:-52134607 Msa0410500:CDS
ACTAGATATGAAACAAAAGC+TGG 0.542367 3_2:-52134377 Msa0410500:CDS
AGGAGAGCAACTTTGCAAGA+AGG 0.546448 3_2:-52132119 Msa0410500:CDS
TCACTCTGGTACCGCCCTTG+TGG 0.556149 3_2:-52136571 Msa0410500:CDS
TGTTAATACAGAGCCGAAGT+CGG 0.559361 3_2:-52136460 Msa0410500:CDS
GCGAGTGCATTATCTAAGCC+GGG 0.559583 3_2:+52136531 None:intergenic
TAAGAGTAACGATGAACTGC+AGG 0.562042 3_2:-52134182 Msa0410500:CDS
TTTCAGGTGGTATAAAGGCT+AGG 0.564453 3_2:-52137122 Msa0410500:intron
GAAACTGGCTGAAGATCAGA+AGG 0.567201 3_2:-52134547 Msa0410500:intron
GAACCAAACACTAATCATCA+AGG 0.567695 3_2:-52134209 Msa0410500:CDS
GGAAGAACAAGCTCGAAAGC+AGG 0.567972 3_2:-52136334 Msa0410500:CDS
GAAAATACAGTCAAGCGCTA+AGG 0.569205 3_2:-52135743 Msa0410500:CDS
GAATTCTATAAAGACTGGCC+CGG 0.571783 3_2:-52136549 Msa0410500:CDS
CTTTGTATCATCTCTAGCAT+GGG 0.577019 3_2:-52130824 Msa0410500:three_prime_UTR
AGTTAATATTCCCACTAGCA+GGG 0.577595 3_2:-52136700 Msa0410500:CDS
GAAGTCGGGTCTTTATGCAT+GGG 0.578902 3_2:-52136445 Msa0410500:CDS
GATGACGATGAAAAGCTGAA+TGG 0.580152 3_2:-52132263 Msa0410500:CDS
TGAGTCGCGGAGAATCGCAT+TGG 0.583964 3_2:-52135650 Msa0410500:CDS
TTATCAGCACCGTTATCAGT+TGG 0.584851 3_2:+52136786 None:intergenic
AAATATTAGGGATTTGACAA+TGG 0.588494 3_2:+52138295 None:intergenic
GCAAGAAAGGAATGTTGTGA+AGG 0.589247 3_2:-52132067 Msa0410500:intron
CCGAGAGAATAATTTGTGCA+TGG 0.590689 3_2:-52131000 Msa0410500:three_prime_UTR
GAGTTATGGAACTATAAAGC+GGG 0.593653 3_2:-52132143 Msa0410500:CDS
GAAGAAAAGATATAATGAGG+AGG 0.605682 3_2:-52133529 Msa0410500:CDS
TTAACTATAACTCCAATCCA+AGG 0.605894 3_2:+52136717 None:intergenic
TAGGGATGAGTATAGACGCA+GGG 0.612645 3_2:-52136637 Msa0410500:CDS
TTTATAGTTCCATAACTCTG+AGG 0.618749 3_2:+52132148 None:intergenic
GGGCGGTACCAGAGTGACCT+CGG 0.624880 3_2:+52136577 None:intergenic
TTAATGAATATAATCCTAGT+GGG 0.627933 3_2:-52132181 Msa0410500:CDS
TATGAATATAGATACTCCAT+CGG 0.631604 3_2:-52136811 Msa0410500:CDS
GCGCTAAGGATCACTTCCAA+AGG 0.633773 3_2:-52135729 Msa0410500:CDS
TTTATAGAATTCCACAAGGG+CGG 0.636696 3_2:+52136560 None:intergenic
GAGGTTACATATCTCCCACT+AGG 0.640674 3_2:+52132167 None:intergenic
TATGGAACTATAAAGCGGGA+AGG 0.642700 3_2:-52132139 Msa0410500:CDS
CATGCATAAAGACCCGACTT+CGG 0.645714 3_2:+52136447 None:intergenic
GCATATGCATCAGACCATCA+CGG 0.645968 3_2:-52136498 Msa0410500:CDS
ATATTGGTGTGAAGAGAATG+GGG 0.648291 3_2:-52133584 Msa0410500:CDS
CTCCGTTAAAGATGCCACCA+CGG 0.652925 3_2:+52132205 None:intergenic
AATCCTCTGTGGAATTTCCG+AGG 0.653346 3_2:-52136594 Msa0410500:CDS
GAGAGCAACTTTGCAAGAAG+GGG 0.655595 3_2:-52132117 Msa0410500:CDS
GAATGGACTGAGAAAAGAAG+TGG 0.656264 3_2:-52132246 Msa0410500:CDS
AATGTCTCAGAGCTCTGAGG+AGG 0.657434 3_2:-52137090 Msa0410500:CDS
AGAGTTATGGAACTATAAAG+CGG 0.659050 3_2:-52132144 Msa0410500:CDS
ACAAGTGAACTTCTCATCCG+AGG 0.660081 3_2:+52136983 None:intergenic
CCATGCTAGAGATGATACAA+AGG 0.660088 3_2:+52130825 None:intergenic
TTAGGGATGAGTATAGACGC+AGG 0.666699 3_2:-52136638 Msa0410500:CDS
AAGTCAGAATGTGAAAACCT+CGG 0.672200 3_2:-52137000 Msa0410500:CDS
AGGGATGAGTATAGACGCAG+GGG 0.684798 3_2:-52136636 Msa0410500:CDS
AGAAAAGTGAGCTTGAGTCG+CGG 0.686345 3_2:-52135663 Msa0410500:CDS
TACAATGTCTCAGAGCTCTG+AGG 0.691431 3_2:-52137093 Msa0410500:exon
CATATCGAGTCAATCCTCTG+TGG 0.700317 3_2:-52136605 Msa0410500:CDS
AAAGGCATATAGTGCCGTGG+TGG 0.703811 3_2:-52132219 Msa0410500:CDS
GTCTTTATAGAATTCCACAA+GGG 0.710739 3_2:+52136557 None:intergenic
AATGGACTGAGAAAAGAAGT+GGG 0.713485 3_2:-52132245 Msa0410500:CDS
AGTCTTTATAGAATTCCACA+AGG 0.716473 3_2:+52136556 None:intergenic
AGAGAATAATTTGTGCATGG+CGG 0.721545 3_2:-52130997 Msa0410500:three_prime_UTR
TGAAAAGGCATATAGTGCCG+TGG 0.725018 3_2:-52132222 Msa0410500:CDS
TATTGGTGTGAAGAGAATGG+GGG 0.746922 3_2:-52133583 Msa0410500:CDS
TGACCTCGGAAATTCCACAG+AGG 0.808295 3_2:+52136591 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAATATT+AGG + chr3_2:52135047-52135066 None:intergenic 0.0%
!!! TGTATTTCATTTTTATTTTT+AGG - chr3_2:52131056-52131075 Msa0410500:intron 10.0%
!!! TTTTGTTTTAACATATTATA+TGG - chr3_2:52133565-52133584 Msa0410500:CDS 10.0%
!! TTTAAATATCTAATAGTAAA+TGG + chr3_2:52134272-52134291 None:intergenic 10.0%
!!! TTTTTACATTACTTTTATAA+TGG - chr3_2:52135307-52135326 Msa0410500:intron 10.0%
!! TATATATATATATATTCACA+TGG + chr3_2:52136297-52136316 None:intergenic 10.0%
!!! TTTATGTAATTTTTAATTTG+TGG - chr3_2:52137861-52137880 Msa0410500:intron 10.0%
!! AAAATCAAAATCAAAATGAA+AGG + chr3_2:52131097-52131116 None:intergenic 15.0%
!! GATAAAAAAAATTGAAACAT+TGG + chr3_2:52131175-52131194 None:intergenic 15.0%
!! ATTGTTAAATTGAATTTAGA+TGG - chr3_2:52131383-52131402 Msa0410500:intron 15.0%
!!! TTTCTAATTTTTCAAAGAAA+TGG - chr3_2:52131496-52131515 Msa0410500:intron 15.0%
!!! TTGATGTATTTACTTTAAAA+TGG - chr3_2:52133860-52133879 Msa0410500:intron 15.0%
!!! TCTTAAGAAATATTTTTCTT+AGG + chr3_2:52134300-52134319 None:intergenic 15.0%
!!! ACTGATTTATTATATCAATT+TGG - chr3_2:52134953-52134972 Msa0410500:intron 15.0%
!!! TATCTATTTTATCTGTATAA+TGG - chr3_2:52136658-52136677 Msa0410500:CDS 15.0%
!! ACTAAAAAAAAAAAATCAGA+AGG + chr3_2:52137504-52137523 None:intergenic 15.0%
!! AAAAATAAGAAAATATGAGA+TGG + chr3_2:52137822-52137841 None:intergenic 15.0%
!! AATTATGACCTAAGAAAAAT+TGG + chr3_2:52130877-52130896 None:intergenic 20.0%
!!! AGCGAAATTAATTGATTTTT+CGG - chr3_2:52131013-52131032 Msa0410500:three_prime_UTR 20.0%
!!! ATTTTGATTATCAACTGAAT+TGG - chr3_2:52131112-52131131 Msa0410500:intron 20.0%
!!! TTTTGATTATCAACTGAATT+GGG - chr3_2:52131113-52131132 Msa0410500:intron 20.0%
!!! TTGAATTTAGATGGTTTTTT+AGG - chr3_2:52131392-52131411 Msa0410500:intron 20.0%
!!! TGGTTTTTTAGGTTATTTTA+AGG - chr3_2:52131403-52131422 Msa0410500:intron 20.0%
!!! GCTGTTTTTATAAACTATAT+TGG - chr3_2:52131734-52131753 Msa0410500:intron 20.0%
!! TTTAGTGAAATATTTGGAAA+AGG - chr3_2:52132211-52132230 Msa0410500:CDS 20.0%
!! TACAAAAAGAACAATATCAT+TGG - chr3_2:52132644-52132663 Msa0410500:intron 20.0%
!! AAATTATTGAAAAGTAACTC+GGG + chr3_2:52132903-52132922 None:intergenic 20.0%
!! CAAATTATTGAAAAGTAACT+CGG + chr3_2:52132904-52132923 None:intergenic 20.0%
!! TTTCTTTATCTCTAAATACA+AGG + chr3_2:52133290-52133309 None:intergenic 20.0%
!! CAACAATTACTGTTAAATAT+TGG + chr3_2:52134025-52134044 None:intergenic 20.0%
!! CAATATTTAACAGTAATTGT+TGG - chr3_2:52134023-52134042 Msa0410500:intron 20.0%
!!! GCTTTTAATGATATGAAATT+CGG - chr3_2:52134089-52134108 Msa0410500:intron 20.0%
!!! CTTTTAATGATATGAAATTC+GGG - chr3_2:52134090-52134109 Msa0410500:intron 20.0%
!! TCTTCAATAAAATTCCATAT+TGG - chr3_2:52134132-52134151 Msa0410500:intron 20.0%
!! ATATCTAATAGTAAATGGAA+TGG + chr3_2:52134267-52134286 None:intergenic 20.0%
!! AGATATAAATGTTATGAAAC+TGG - chr3_2:52134487-52134506 Msa0410500:intron 20.0%
!! TAATTCAAGTATGAAAGAAT+TGG + chr3_2:52135011-52135030 None:intergenic 20.0%
!! TCTTTCATACTTGAATTATT+TGG - chr3_2:52135013-52135032 Msa0410500:intron 20.0%
!! TATGAAGAAAAGATATAATG+AGG - chr3_2:52135517-52135536 Msa0410500:intron 20.0%
!! AAAGTTAAAAATACAGTTAC+TGG + chr3_2:52135882-52135901 None:intergenic 20.0%
!!! AGTAACTGTATTTTTAACTT+TGG - chr3_2:52135881-52135900 Msa0410500:intron 20.0%
!! ATAAAGAGCAATTAACTATA+AGG + chr3_2:52136468-52136487 None:intergenic 20.0%
!! TATCAAAGATGACTATATTT+AGG - chr3_2:52136512-52136531 Msa0410500:CDS 20.0%
!! ATTAATGAATATAATCCTAG+TGG - chr3_2:52136867-52136886 Msa0410500:CDS 20.0%
!! TTAATGAATATAATCCTAGT+GGG - chr3_2:52136868-52136887 Msa0410500:CDS 20.0%
!! TTCTAGTATAAGTAATCATA+TGG + chr3_2:52137173-52137192 None:intergenic 20.0%
!! ATGATTACTTATACTAGAAA+AGG - chr3_2:52137174-52137193 Msa0410500:intron 20.0%
!! TGATTACTTATACTAGAAAA+GGG - chr3_2:52137175-52137194 Msa0410500:intron 20.0%
!!! TTTTTGATATTGATAGAAAC+TGG + chr3_2:52137263-52137282 None:intergenic 20.0%
!!! AAAATTATCCTTTTTGGTTA+AGG + chr3_2:52137698-52137717 None:intergenic 20.0%
!!! CTGAAAAAAATTATCCTTTT+TGG + chr3_2:52137704-52137723 None:intergenic 20.0%
!!! AATTTTTTTCAGAAACATTG+TGG - chr3_2:52137712-52137731 Msa0410500:intron 20.0%
!!! TTTTGGAGATTTCTAATTTT+GGG - chr3_2:52137890-52137909 Msa0410500:intron 20.0%
!! AATTTATGATCATGTTAAAC+TGG - chr3_2:52138141-52138160 Msa0410500:intron 20.0%
! AAATATTAGGGATTTGACAA+TGG + chr3_2:52130757-52130776 None:intergenic 25.0%
! TCTCTATAAAAAGAGAGTTT+AGG + chr3_2:52130808-52130827 None:intergenic 25.0%
! TAAGAAAAATTGGAAGTAGA+AGG + chr3_2:52130867-52130886 None:intergenic 25.0%
!! TTCTACTTCCAATTTTTCTT+AGG - chr3_2:52130866-52130885 Msa0410500:three_prime_UTR 25.0%
! CATAATTTCATCACTCAATT+CGG - chr3_2:52130890-52130909 Msa0410500:three_prime_UTR 25.0%
!! CAAATTTTCCACTGTTTATT+CGG - chr3_2:52130973-52130992 Msa0410500:three_prime_UTR 25.0%
! AAATTAAACCGAATAAACAG+TGG + chr3_2:52130984-52131003 None:intergenic 25.0%
! TTTGATTATCAACTGAATTG+GGG - chr3_2:52131114-52131133 Msa0410500:intron 25.0%
!! CTATTAATCTGAAGTTTGAA+CGG - chr3_2:52131331-52131350 Msa0410500:intron 25.0%
! ATAAGAAAGTGAAAGGATTT+AGG - chr3_2:52131572-52131591 Msa0410500:intron 25.0%
! TAAGAAAGTGAAAGGATTTA+GGG - chr3_2:52131573-52131592 Msa0410500:intron 25.0%
! CTTATCTACTGACATAAATT+TGG + chr3_2:52131839-52131858 None:intergenic 25.0%
! TAACACTGAATTTGTATTTC+AGG - chr3_2:52131911-52131930 Msa0410500:intron 25.0%
!!! TTTGGCTTTAGTGAAATATT+TGG - chr3_2:52132205-52132224 Msa0410500:CDS 25.0%
! TATGAATATAGATACTCCAT+CGG - chr3_2:52132238-52132257 Msa0410500:CDS 25.0%
!!! CGAGTTACTTTTCAATAATT+TGG - chr3_2:52132902-52132921 Msa0410500:intron 25.0%
!! ACTTTTCAATAATTTGGATC+AGG - chr3_2:52132908-52132927 Msa0410500:intron 25.0%
! ATTCTGAATTTGACAATCAA+GGG - chr3_2:52133072-52133091 Msa0410500:intron 25.0%
!! ATTTCTGAAGAATATTATGC+TGG - chr3_2:52133181-52133200 Msa0410500:intron 25.0%
! AAGTGGAAATTGATTAAACT+TGG + chr3_2:52133663-52133682 None:intergenic 25.0%
!! ATCATTTTCAGTTGAATCTA+TGG - chr3_2:52133724-52133743 Msa0410500:intron 25.0%
! AATCTATGGATGATTAATTC+TGG - chr3_2:52133738-52133757 Msa0410500:intron 25.0%
! TTTGAGTAGTATGTTGTTAA+AGG - chr3_2:52133803-52133822 Msa0410500:intron 25.0%
! TTGAGTAGTATGTTGTTAAA+GGG - chr3_2:52133804-52133823 Msa0410500:intron 25.0%
! TAATAGTAAATGGAATGGAA+AGG + chr3_2:52134262-52134281 None:intergenic 25.0%
! TTTAAATAATCTCAGAGACA+TGG + chr3_2:52134346-52134365 None:intergenic 25.0%
! AGTATGAAAGAATTGGAAAA+TGG + chr3_2:52135004-52135023 None:intergenic 25.0%
!!! CATTACTTTTATAATGGACT+AGG - chr3_2:52135313-52135332 Msa0410500:intron 25.0%
!! CATGAAGATAGTCAATATTT+TGG - chr3_2:52135690-52135709 Msa0410500:CDS 25.0%
! AAATATTGTAGGGGATTAAT+AGG - chr3_2:52135824-52135843 Msa0410500:intron 25.0%
! TATAATACACCTAAGTAACA+AGG + chr3_2:52136033-52136052 None:intergenic 25.0%
!! TGTTACTTAGGTGTATTATA+CGG - chr3_2:52136033-52136052 Msa0410500:intron 25.0%
!! AATATTTGGTAATCCCTTAA+AGG - chr3_2:52136197-52136216 Msa0410500:CDS 25.0%
! ATCTGATCATTATCAAAGAA+GGG + chr3_2:52136349-52136368 None:intergenic 25.0%
! AATCTGATCATTATCAAAGA+AGG + chr3_2:52136350-52136369 None:intergenic 25.0%
! AAGAATCTCAGGATATTATA+GGG + chr3_2:52136438-52136457 None:intergenic 25.0%
!! TGCTCTTTATTCAACTATTT+TGG - chr3_2:52136478-52136497 Msa0410500:CDS 25.0%
!! ATATAGTCATCTTTGATAGT+AGG + chr3_2:52136510-52136529 None:intergenic 25.0%
! AAGATCTTAATAATGTGCTT+TGG - chr3_2:52136547-52136566 Msa0410500:CDS 25.0%
! CTTGTCAATTTAATCATCAA+TGG + chr3_2:52136576-52136595 None:intergenic 25.0%
!! CATTGATGATTAAATTGACA+AGG - chr3_2:52136574-52136593 Msa0410500:CDS 25.0%
! ATTCAAAGAAGTAACTTAGA+TGG + chr3_2:52137109-52137128 None:intergenic 25.0%
! TATAAGTAATCATATGGAAG+GGG + chr3_2:52137167-52137186 None:intergenic 25.0%
! GTATAAGTAATCATATGGAA+GGG + chr3_2:52137168-52137187 None:intergenic 25.0%
! AGTATAAGTAATCATATGGA+AGG + chr3_2:52137169-52137188 None:intergenic 25.0%
!! ATATTGATAGAAACTGGTTT+CGG + chr3_2:52137257-52137276 None:intergenic 25.0%
! AAAAACCCAATTCCATTAAA+GGG + chr3_2:52137430-52137449 None:intergenic 25.0%
! AAAAAACCCAATTCCATTAA+AGG + chr3_2:52137431-52137450 None:intergenic 25.0%
! AAAAAAAATCAGAAGGTTGA+GGG + chr3_2:52137497-52137516 None:intergenic 25.0%
! AAAAAAAAATCAGAAGGTTG+AGG + chr3_2:52137498-52137517 None:intergenic 25.0%
!!! TTAATTTGTGGCATAACTTT+TGG - chr3_2:52137873-52137892 Msa0410500:intron 25.0%
!!! CTTTTGGAGATTTCTAATTT+TGG - chr3_2:52137889-52137908 Msa0410500:intron 25.0%
!! TTTGGAGATTTCTAATTTTG+GGG - chr3_2:52137891-52137910 Msa0410500:intron 25.0%
!!! TAATTTTGGGGTTTGTAATT+AGG - chr3_2:52137903-52137922 Msa0410500:intron 25.0%
!!! ATCATTTCATGTTTTGTTGA+TGG - chr3_2:52138003-52138022 Msa0410500:intron 25.0%
!! ACGAGGTTCTGAAAATATTA+GGG + chr3_2:52130769-52130788 None:intergenic 30.0%
GTCATAAAAACAAAATGACG+AGG + chr3_2:52130786-52130805 None:intergenic 30.0%
AATTGGAAGTAGAAGGAAAA+TGG + chr3_2:52130860-52130879 None:intergenic 30.0%
GAAATAGAGAAATGCAGAAA+TGG + chr3_2:52130923-52130942 None:intergenic 30.0%
TTGATTATCAACTGAATTGG+GGG - chr3_2:52131115-52131134 Msa0410500:intron 30.0%
!! AATGTCTCATGTTGACTTAA+GGG - chr3_2:52131295-52131314 Msa0410500:intron 30.0%
ATTCCCTTAAATGTGTGATT+GGG + chr3_2:52131469-52131488 None:intergenic 30.0%
! TCTACTTTGATGTTTTGCTA+AGG - chr3_2:52131543-52131562 Msa0410500:intron 30.0%
! ATAAATTTGGTGAGACTGTT+TGG + chr3_2:52131826-52131845 None:intergenic 30.0%
! TTGTATTTCAGGTGGTATAA+AGG - chr3_2:52131922-52131941 Msa0410500:intron 30.0%
TGTTATGAAGAACTGAAAAG+TGG - chr3_2:52132026-52132045 Msa0410500:intron 30.0%
! TTTCTTTTCTTAGGACAGTA+TGG + chr3_2:52132092-52132111 None:intergenic 30.0%
ACTGTCCTAAGAAAAGAAAA+CGG - chr3_2:52132093-52132112 Msa0410500:CDS 30.0%
! TAATCCCGTTTTCTTTTCTT+AGG + chr3_2:52132101-52132120 None:intergenic 30.0%
TTAACTATAACTCCAATCCA+AGG + chr3_2:52132335-52132354 None:intergenic 30.0%
GTCTTTATAGAATTCCACAA+GGG + chr3_2:52132495-52132514 None:intergenic 30.0%
AGTCTTTATAGAATTCCACA+AGG + chr3_2:52132496-52132515 None:intergenic 30.0%
TTGTGGAATTCTATAAAGAC+TGG - chr3_2:52132495-52132514 Msa0410500:intron 30.0%
CTCAATAATGTTGGTCAAAT+TGG + chr3_2:52132753-52132772 None:intergenic 30.0%
CAATTTGACCAACATTATTG+AGG - chr3_2:52132751-52132770 Msa0410500:intron 30.0%
! GTTTTTGACCTCAATAATGT+TGG + chr3_2:52132762-52132781 None:intergenic 30.0%
! TGTCATAGCAGAATTCATTT+TGG + chr3_2:52132828-52132847 None:intergenic 30.0%
CTCATTCAAGCTTATAATGA+AGG - chr3_2:52132860-52132879 Msa0410500:intron 30.0%
GATTCTGAATTTGACAATCA+AGG - chr3_2:52133071-52133090 Msa0410500:intron 30.0%
TTCTGAATTTGACAATCAAG+GGG - chr3_2:52133073-52133092 Msa0410500:intron 30.0%
GTTGCACCATAAATAAAGTT+TGG - chr3_2:52133145-52133164 Msa0410500:intron 30.0%
! ACGATGCCAAACTTTATTTA+TGG + chr3_2:52133154-52133173 None:intergenic 30.0%
CGTGATCATTAAAAATCCTT+TGG + chr3_2:52133339-52133358 None:intergenic 30.0%
GATTCCTGTAGAATTTGTAT+TGG - chr3_2:52133530-52133549 Msa0410500:CDS 30.0%
TTCTCCAATACAAATTCTAC+AGG + chr3_2:52133537-52133556 None:intergenic 30.0%
!! CATCTAAAGTATCGATCATA+TGG + chr3_2:52133610-52133629 None:intergenic 30.0%
ATCAAACATGCTAAGTAAAG+TGG + chr3_2:52133680-52133699 None:intergenic 30.0%
! TTTGATGATCATGGAATGAT+TGG - chr3_2:52133694-52133713 Msa0410500:intron 30.0%
! TGATTAATTCTGGAAAGAGT+CGG - chr3_2:52133748-52133767 Msa0410500:intron 30.0%
ACTGGCAATATGATTAAAAC+TGG - chr3_2:52133774-52133793 Msa0410500:intron 30.0%
ATCTGTCTATCTGTGTTTAA+CGG - chr3_2:52133921-52133940 Msa0410500:intron 30.0%
!! ATTGTTGGCTCTACTTAAAA+TGG - chr3_2:52134038-52134057 Msa0410500:intron 30.0%
ATATGAAATTCGGGTAATGA+GGG - chr3_2:52134099-52134118 Msa0410500:intron 30.0%
ACTAGATATGAAACAAAAGC+TGG - chr3_2:52134672-52134691 Msa0410500:intron 30.0%
!!! AGATGTAGAAGTTTTGAAGA+AGG - chr3_2:52134756-52134775 Msa0410500:intron 30.0%
! AAGGTAGATGATTTGCATAT+GGG - chr3_2:52134775-52134794 Msa0410500:intron 30.0%
AAAGCACAACTTACACATAT+AGG + chr3_2:52135153-52135172 None:intergenic 30.0%
TAATGCTTTCTCTATCTTGT+AGG - chr3_2:52135415-52135434 Msa0410500:intron 30.0%
AATGCTTTCTCTATCTTGTA+GGG - chr3_2:52135416-52135435 Msa0410500:intron 30.0%
! TTGTAGGGCATTAAAGATAT+AGG - chr3_2:52135431-52135450 Msa0410500:intron 30.0%
! ATCTTTTCTTCATAGCTTCA+AGG + chr3_2:52135511-52135530 None:intergenic 30.0%
GAAGAAAAGATATAATGAGG+AGG - chr3_2:52135520-52135539 Msa0410500:intron 30.0%
TTCAGAACTATGTTCATTGT+GGG - chr3_2:52135559-52135578 Msa0410500:intron 30.0%
TCAATCATGACAACTTTGAA+TGG + chr3_2:52135614-52135633 None:intergenic 30.0%
TTCAAAGTTGTCATGATTGA+AGG - chr3_2:52135614-52135633 Msa0410500:CDS 30.0%
TCAAAGTTGTCATGATTGAA+GGG - chr3_2:52135615-52135634 Msa0410500:CDS 30.0%
! TATTGACTATCTTCATGAAG+AGG + chr3_2:52135687-52135706 None:intergenic 30.0%
TACTCTTGATTGGAACTATT+TGG - chr3_2:52135720-52135739 Msa0410500:CDS 30.0%
ATTACATTTACAGGTTCAGA+AGG + chr3_2:52135746-52135765 None:intergenic 30.0%
AGAGAAGGAATTACATTTAC+AGG + chr3_2:52135755-52135774 None:intergenic 30.0%
! TGCTGTTTGGAAATATTGTA+GGG - chr3_2:52135814-52135833 Msa0410500:intron 30.0%
!!! TTTTTGTTGTTCAAACCTTC+CGG + chr3_2:52135959-52135978 None:intergenic 30.0%
! ATGCAAAATCCTTGTTACTT+AGG - chr3_2:52136021-52136040 Msa0410500:intron 30.0%
GTTACTTAGGTGTATTATAC+GGG - chr3_2:52136034-52136053 Msa0410500:intron 30.0%
TTACTTAGGTGTATTATACG+GGG - chr3_2:52136035-52136054 Msa0410500:intron 30.0%
AAGAATTGAGGTGGAATATT+TGG - chr3_2:52136183-52136202 Msa0410500:intron 30.0%
AAATGCAACAAGTCCTTTAA+GGG + chr3_2:52136213-52136232 None:intergenic 30.0%
AAAATGCAACAAGTCCTTTA+AGG + chr3_2:52136214-52136233 None:intergenic 30.0%
GGAAAACAGAGAAAAATACA+TGG + chr3_2:52136243-52136262 None:intergenic 30.0%
AGAAGGGATTACAATTTACA+TGG + chr3_2:52136333-52136352 None:intergenic 30.0%
CAAGAATCTCAGGATATTAT+AGG + chr3_2:52136439-52136458 None:intergenic 30.0%
AAGGTAATATCAAGAATCTC+AGG + chr3_2:52136449-52136468 None:intergenic 30.0%
GTCAATTTAATCATCAATGG+TGG + chr3_2:52136573-52136592 None:intergenic 30.0%
CGTCATCTTTAATAATTTCC+TGG + chr3_2:52136773-52136792 None:intergenic 30.0%
TTTATAGTTCCATAACTCTG+AGG + chr3_2:52136904-52136923 None:intergenic 30.0%
AGAGTTATGGAACTATAAAG+CGG - chr3_2:52136905-52136924 Msa0410500:CDS 30.0%
!! GCTGTTACTTTAAGTAACTA+CGG + chr3_2:52137087-52137106 None:intergenic 30.0%
TCTTCTCAAGAAATTACAAG+TGG - chr3_2:52137130-52137149 Msa0410500:intron 30.0%
ATAAGTAATCATATGGAAGG+GGG + chr3_2:52137166-52137185 None:intergenic 30.0%
AATTGAGAATTTCCCACTTA+AGG + chr3_2:52137222-52137241 None:intergenic 30.0%
ATTAAAGGGACTGTAAGAAA+AGG + chr3_2:52137416-52137435 None:intergenic 30.0%
! TTTTCTTACAGTCCCTTTAA+TGG - chr3_2:52137415-52137434 Msa0410500:intron 30.0%
TTTGAAAGATCTATCACTGT+GGG + chr3_2:52137454-52137473 None:intergenic 30.0%
!! TTTTGAAAGATCTATCACTG+TGG + chr3_2:52137455-52137474 None:intergenic 30.0%
AAAAAAATCAGAAGGTTGAG+GGG + chr3_2:52137496-52137515 None:intergenic 30.0%
!!! TTTTTGCACTGGTTTTGTTT+TGG - chr3_2:52137576-52137595 Msa0410500:intron 30.0%
CTACAACAAGAAAACAACAA+AGG + chr3_2:52137614-52137633 None:intergenic 30.0%
! CATGTTTTCCTTAACCAAAA+AGG - chr3_2:52137687-52137706 Msa0410500:intron 30.0%
AGAATAAAACTCAACATCTG+TGG + chr3_2:52137783-52137802 None:intergenic 30.0%
! AGCAAATTGATTCCAAACAT+AGG + chr3_2:52137956-52137975 None:intergenic 30.0%
TTATGCACAACCTTAATCTT+CGG + chr3_2:52138114-52138133 None:intergenic 30.0%
!! GACGAGGTTCTGAAAATATT+AGG + chr3_2:52130770-52130789 None:intergenic 35.0%
!!! CTCTTTTTATAGAGAGCGTT+AGG - chr3_2:52130813-52130832 Msa0410500:three_prime_UTR 35.0%
AAGTAGAAGGAAAATGGATC+TGG + chr3_2:52130854-52130873 None:intergenic 35.0%
GAGAAACAGAAAGAGAAAGA+AGG + chr3_2:52130954-52130973 None:intergenic 35.0%
!! GAATGTCTCATGTTGACTTA+AGG - chr3_2:52131294-52131313 Msa0410500:intron 35.0%
!! ATGTCTCATGTTGACTTAAG+GGG - chr3_2:52131296-52131315 Msa0410500:intron 35.0%
!! ATCTGAAGTTTGAACGGTTT+TGG - chr3_2:52131337-52131356 Msa0410500:intron 35.0%
AGTCCCAATCACACATTTAA+GGG - chr3_2:52131463-52131482 Msa0410500:intron 35.0%
CATTCCCTTAAATGTGTGAT+TGG + chr3_2:52131470-52131489 None:intergenic 35.0%
! TTTGATGTTTTGCTAAGGCT+TGG - chr3_2:52131548-52131567 Msa0410500:intron 35.0%
GCTTGGAATAAGAAAGTGAA+AGG - chr3_2:52131565-52131584 Msa0410500:intron 35.0%
GTCAGTAGATAAGCTCAAAT+TGG - chr3_2:52131846-52131865 Msa0410500:intron 35.0%
CACTGAATTTGTATTTCAGG+TGG - chr3_2:52131914-52131933 Msa0410500:intron 35.0%
!! TTCTGAGATAAGTGAGTATG+AGG - chr3_2:52131998-52132017 Msa0410500:intron 35.0%
AAGTCAGAATGTGAAAACCT+CGG - chr3_2:52132049-52132068 Msa0410500:intron 35.0%
CTGTCCTAAGAAAAGAAAAC+GGG - chr3_2:52132094-52132113 Msa0410500:CDS 35.0%
! AAATGAGTAGCCTTTTCTCT+TGG + chr3_2:52132188-52132207 None:intergenic 35.0%
AAGAGAAAAGGCTACTCATT+TGG - chr3_2:52132187-52132206 Msa0410500:CDS 35.0%
! ATTCTGATGAGCAGTTTGTT+TGG - chr3_2:52132309-52132328 Msa0410500:intron 35.0%
TAGTTAATATTCCCACTAGC+AGG - chr3_2:52132348-52132367 Msa0410500:intron 35.0%
AGTTAATATTCCCACTAGCA+GGG - chr3_2:52132349-52132368 Msa0410500:intron 35.0%
TTTATAGAATTCCACAAGGG+CGG + chr3_2:52132492-52132511 None:intergenic 35.0%
! TCTTTTTGTAGTCATCAGCT+CGG + chr3_2:52132634-52132653 None:intergenic 35.0%
ATAATTTGGATCAGGACTTG+TGG - chr3_2:52132916-52132935 Msa0410500:intron 35.0%
CAAATTCAGAATCAACCCAT+TGG + chr3_2:52133064-52133083 None:intergenic 35.0%
TCTGAATTTGACAATCAAGG+GGG - chr3_2:52133074-52133093 Msa0410500:intron 35.0%
AAGAAAGTTGCTAGAAGAGA+TGG - chr3_2:52133453-52133472 Msa0410500:CDS 35.0%
GATCGATACTTTAGATGTGT+TGG - chr3_2:52133613-52133632 Msa0410500:CDS 35.0%
! TGTGTTGGTGCTTTCAATTA+AGG - chr3_2:52133628-52133647 Msa0410500:intron 35.0%
! CTTAGCATGTTTGATGATCA+TGG - chr3_2:52133685-52133704 Msa0410500:intron 35.0%
ATGATCATGGAATGATTGGT+TGG - chr3_2:52133698-52133717 Msa0410500:intron 35.0%
TCCAAAACAAGTTAAGTGTC+TGG - chr3_2:52133833-52133852 Msa0410500:intron 35.0%
!!! TCCAGACACTTAACTTGTTT+TGG + chr3_2:52133837-52133856 None:intergenic 35.0%
TCTCATGATTCAATTCTCAG+TGG - chr3_2:52133889-52133908 Msa0410500:intron 35.0%
! TGTGTCTCTGATTTTCATCT+AGG - chr3_2:52133946-52133965 Msa0410500:intron 35.0%
ACTTGTGAGTTAAGCAACAA+GGG + chr3_2:52133984-52134003 None:intergenic 35.0%
CATAGCATATAACCACTCAT+TGG + chr3_2:52134070-52134089 None:intergenic 35.0%
GATATGAAATTCGGGTAATG+AGG - chr3_2:52134098-52134117 Msa0410500:intron 35.0%
! AGGAAAAGAGTTTTACAGGA+TGG + chr3_2:52134199-52134218 None:intergenic 35.0%
!! CAAGCTGAATGATTTTAGCA+TGG + chr3_2:52134645-52134664 None:intergenic 35.0%
TATGAAACAAAAGCTGGAAC+TGG - chr3_2:52134678-52134697 Msa0410500:intron 35.0%
! GAAGGTAGATGATTTGCATA+TGG - chr3_2:52134774-52134793 Msa0410500:intron 35.0%
! ATGATTTGCATATGGGTTTG+AGG - chr3_2:52134782-52134801 Msa0410500:intron 35.0%
! TGATTTGCATATGGGTTTGA+GGG - chr3_2:52134783-52134802 Msa0410500:intron 35.0%
GAACCAAACACTAATCATCA+AGG - chr3_2:52134840-52134859 Msa0410500:intron 35.0%
CATATTGGTGTGAAGAGAAT+GGG - chr3_2:52135464-52135483 Msa0410500:intron 35.0%
ATATTGGTGTGAAGAGAATG+GGG - chr3_2:52135465-52135484 Msa0410500:intron 35.0%
TTCTTCATAGCTTCAAGGAA+CGG + chr3_2:52135506-52135525 None:intergenic 35.0%
CTTCAGAACTATGTTCATTG+TGG - chr3_2:52135558-52135577 Msa0410500:intron 35.0%
AGTATCTAAAAGACCCAGAT+TGG - chr3_2:52135585-52135604 Msa0410500:intron 35.0%
CATGATTGAAGGGAAAGAAA+AGG - chr3_2:52135625-52135644 Msa0410500:CDS 35.0%
ATTGAAGGGAAAGAAAAGGT+AGG - chr3_2:52135629-52135648 Msa0410500:CDS 35.0%
TTTGTATCCAAGCGATTTAC+TGG - chr3_2:52135776-52135795 Msa0410500:intron 35.0%
! TCGAAAAAGTATGTGCTGTT+TGG - chr3_2:52135801-52135820 Msa0410500:intron 35.0%
!! GTGCTGTTTGGAAATATTGT+AGG - chr3_2:52135813-52135832 Msa0410500:intron 35.0%
GCTGTTTGGAAATATTGTAG+GGG - chr3_2:52135815-52135834 Msa0410500:intron 35.0%
!!! TTTTGTTGTTCAAACCTTCC+GGG + chr3_2:52135958-52135977 None:intergenic 35.0%
TATTATACGGGGAAAGTGAT+GGG - chr3_2:52136046-52136065 Msa0410500:intron 35.0%
TGAGTGAATACCAAAATGAG+TGG - chr3_2:52136091-52136110 Msa0410500:intron 35.0%
AATACCAAAATGAGTGGTAG+TGG - chr3_2:52136097-52136116 Msa0410500:intron 35.0%
ATACCAAAATGAGTGGTAGT+GGG - chr3_2:52136098-52136117 Msa0410500:intron 35.0%
TAGTTCATAAGAGAGAAGTC+TGG - chr3_2:52136375-52136394 Msa0410500:CDS 35.0%
CTCAGGATATTATAGGGAAT+CGG + chr3_2:52136432-52136451 None:intergenic 35.0%
ATAAACTGTCCTAAAGCAGT+GGG + chr3_2:52136630-52136649 None:intergenic 35.0%
AATAAACTGTCCTAAAGCAG+TGG + chr3_2:52136631-52136650 None:intergenic 35.0%
AAACTTCTAACGATTGCACT+TGG - chr3_2:52136721-52136740 Msa0410500:CDS 35.0%
! TTCTACGCATTTTTCATTCC+AGG - chr3_2:52136752-52136771 Msa0410500:CDS 35.0%
!! AATGGACTGAGAAAAGAAGT+GGG - chr3_2:52136804-52136823 Msa0410500:CDS 35.0%
GATATGTAACCTCAGAGTTA+TGG - chr3_2:52136892-52136911 Msa0410500:CDS 35.0%
GAGTTATGGAACTATAAAGC+GGG - chr3_2:52136906-52136925 Msa0410500:CDS 35.0%
TGGGAAATTCTCAATTCCAT+CGG - chr3_2:52137226-52137245 Msa0410500:intron 35.0%
AAGAAAAGGCAAAGACAAAG+AGG + chr3_2:52137402-52137421 None:intergenic 35.0%
TACAGTCCCTTTAATGGAAT+TGG - chr3_2:52137421-52137440 Msa0410500:intron 35.0%
ACAGTCCCTTTAATGGAATT+GGG - chr3_2:52137422-52137441 Msa0410500:intron 35.0%
!!! TGCAGTTTCTTTTTTTGCAC+TGG - chr3_2:52137565-52137584 Msa0410500:intron 35.0%
!! GATTTGTTGAAATTGAGCAG+CGG - chr3_2:52137734-52137753 Msa0410500:intron 35.0%
!!! TTTCATGTTTTGTTGATGGC+AGG - chr3_2:52138007-52138026 Msa0410500:intron 35.0%
CCATGCACAAATTATTCTCT+CGG + chr3_2:52138052-52138071 None:intergenic 35.0%
! AGAGAATAATTTGTGCATGG+CGG - chr3_2:52138052-52138071 Msa0410500:intron 35.0%
CTTTGTATCATCTCTAGCAT+GGG - chr3_2:52138225-52138244 Msa0410500:five_prime_UTR 35.0%
!!! TGATTTTGTTTTGCGTATCC+AGG - chr3_2:52138326-52138345 Msa0410500:five_prime_UTR 35.0%
!!! ACTTAGTTTTGATCAAGACC+TGG + chr3_2:52138347-52138366 None:intergenic 35.0%
! AAAGAGAAAGAAGGTGCATG+AGG + chr3_2:52130945-52130964 None:intergenic 40.0%
CAGTCCCAATCACACATTTA+AGG - chr3_2:52131462-52131481 Msa0410500:intron 40.0%
! GAAAGGATTTAGGGTCTGTT+TGG - chr3_2:52131582-52131601 Msa0410500:intron 40.0%
! TTTCAGGTGGTATAAAGGCT+AGG - chr3_2:52131927-52131946 Msa0410500:intron 40.0%
GAAGAGAAAGCCAAGAGAAA+AGG - chr3_2:52132175-52132194 Msa0410500:CDS 40.0%
TTATCAGCACCGTTATCAGT+TGG + chr3_2:52132266-52132285 None:intergenic 40.0%
!! ACTGATAACGGTGCTGATAA+CGG - chr3_2:52132266-52132285 Msa0410500:CDS 40.0%
TCTATACTCATCCCTAAGCT+TGG + chr3_2:52132408-52132427 None:intergenic 40.0%
! GAATTCTATAAAGACTGGCC+CGG - chr3_2:52132500-52132519 Msa0410500:intron 40.0%
TGTTAATACAGAGCCGAAGT+CGG - chr3_2:52132589-52132608 Msa0410500:intron 40.0%
! CTTTTTGTAGTCATCAGCTC+GGG + chr3_2:52132633-52132652 None:intergenic 40.0%
TGGTGAATATCTGCGAAAGA+TGG - chr3_2:52132664-52132683 Msa0410500:intron 40.0%
GGTGAATATCTGCGAAAGAT+GGG - chr3_2:52132665-52132684 Msa0410500:intron 40.0%
CAAAACCATACCTGAACTTC+AGG - chr3_2:52132694-52132713 Msa0410500:intron 40.0%
TTCTTCCTGAAGTTCAGGTA+TGG + chr3_2:52132702-52132721 None:intergenic 40.0%
TATGTAGTGCAACTTGCAAC+TGG - chr3_2:52132999-52133018 Msa0410500:intron 40.0%
! TAGCAGTATGTGGCTATTTC+CGG + chr3_2:52133111-52133130 None:intergenic 40.0%
TACTGCTAGGATCATTGCAA+CGG - chr3_2:52133123-52133142 Msa0410500:intron 40.0%
GAAAATACAGTCAAGCGCTA+AGG - chr3_2:52133306-52133325 Msa0410500:intron 40.0%
AAAGTTGCTAGAAGAGATGG+AGG - chr3_2:52133456-52133475 Msa0410500:CDS 40.0%
CCAATCATAGTATGCTAGAG+GGG + chr3_2:52133510-52133529 None:intergenic 40.0%
CCCAATCATAGTATGCTAGA+GGG + chr3_2:52133511-52133530 None:intergenic 40.0%
CCCTCTAGCATACTATGATT+GGG - chr3_2:52133508-52133527 Msa0410500:CDS 40.0%
TCCCAATCATAGTATGCTAG+AGG + chr3_2:52133512-52133531 None:intergenic 40.0%
CACTTGTGAGTTAAGCAACA+AGG + chr3_2:52133985-52134004 None:intergenic 40.0%
TGCTTAACTCACAAGTGATG+TGG - chr3_2:52133988-52134007 Msa0410500:intron 40.0%
AACTCACAAGTGATGTGGAA+CGG - chr3_2:52133993-52134012 Msa0410500:intron 40.0%
CCATTGCAATGCATCCAATA+TGG + chr3_2:52134149-52134168 None:intergenic 40.0%
CCATATTGGATGCATTGCAA+TGG - chr3_2:52134146-52134165 Msa0410500:intron 40.0%
! AGGGAGGAAAAGAGTTTTAC+AGG + chr3_2:52134203-52134222 None:intergenic 40.0%
! TCTTTTCCTCCCTCCAATTT+GGG - chr3_2:52134210-52134229 Msa0410500:CDS 40.0%
!! AAGGCTTTGTTTAACTCTGC+TGG - chr3_2:52134393-52134412 Msa0410500:CDS 40.0%
GAGAAATAGCTCTCTTCAGA+TGG - chr3_2:52134442-52134461 Msa0410500:intron 40.0%
! TGATCGAAAGTGTGCTTGTT+AGG - chr3_2:52134555-52134574 Msa0410500:CDS 40.0%
TTGTTAGGTTCAGAGTAGCA+TGG - chr3_2:52134570-52134589 Msa0410500:CDS 40.0%
CTGGAGATTCAGCAACTAAA+AGG - chr3_2:52134697-52134716 Msa0410500:intron 40.0%
! GCTCCTTGATGATTAGTGTT+TGG + chr3_2:52134846-52134865 None:intergenic 40.0%
TAAGAGTAACGATGAACTGC+AGG - chr3_2:52134867-52134886 Msa0410500:intron 40.0%
ATAGGTACTCGAGTCCATAT+TGG - chr3_2:52135449-52135468 Msa0410500:intron 40.0%
CCATTCTCTTCACACCAATA+TGG + chr3_2:52135466-52135485 None:intergenic 40.0%
CCATATTGGTGTGAAGAGAA+TGG - chr3_2:52135463-52135482 Msa0410500:intron 40.0%
TATTGGTGTGAAGAGAATGG+GGG - chr3_2:52135466-52135485 Msa0410500:intron 40.0%
CTTTGAATGGATGCCAATCT+GGG + chr3_2:52135601-52135620 None:intergenic 40.0%
ACTTTGAATGGATGCCAATC+TGG + chr3_2:52135602-52135621 None:intergenic 40.0%
! TGGTTGACTCTACTCTTGAT+TGG - chr3_2:52135710-52135729 Msa0410500:CDS 40.0%
CGCTTGGATACAAAAAGAGA+AGG + chr3_2:52135770-52135789 None:intergenic 40.0%
CAACTGCACTTTCTCATTCT+GGG - chr3_2:52135924-52135943 Msa0410500:intron 40.0%
GTATTATACGGGGAAAGTGA+TGG - chr3_2:52136045-52136064 Msa0410500:intron 40.0%
!! AAAGTGATGGGCAGTAGTAA+TGG - chr3_2:52136058-52136077 Msa0410500:intron 40.0%
! TACCAAAATGAGTGGTAGTG+GGG - chr3_2:52136099-52136118 Msa0410500:intron 40.0%
!! GGGAGTAGCAATTAGTTTGT+GGG - chr3_2:52136121-52136140 Msa0410500:intron 40.0%
TGGGAAACGAGAATAAAAGC+AGG - chr3_2:52136140-52136159 Msa0410500:intron 40.0%
AACGAGAATAAAAGCAGGAG+AGG - chr3_2:52136145-52136164 Msa0410500:intron 40.0%
AGAATAAAAGCAGGAGAGGA+AGG - chr3_2:52136149-52136168 Msa0410500:intron 40.0%
GAATAAAAGCAGGAGAGGAA+GGG - chr3_2:52136150-52136169 Msa0410500:intron 40.0%
GGTGGAACTTAGAAGAATTG+AGG - chr3_2:52136171-52136190 Msa0410500:intron 40.0%
GGAACTTAGAAGAATTGAGG+TGG - chr3_2:52136174-52136193 Msa0410500:intron 40.0%
ATTCTCACTTTCTCTGATGC+TGG + chr3_2:52136264-52136283 None:intergenic 40.0%
TGGGGGGAAATGAAAGTTAA+TGG + chr3_2:52136611-52136630 None:intergenic 40.0%
TAAACTGTCCTAAAGCAGTG+GGG + chr3_2:52136629-52136648 None:intergenic 40.0%
AACGATTGCACTTGGTTATC+TGG - chr3_2:52136729-52136748 Msa0410500:CDS 40.0%
GATGACGATGAAAAGCTGAA+TGG - chr3_2:52136786-52136805 Msa0410500:CDS 40.0%
!! GAATGGACTGAGAAAAGAAG+TGG - chr3_2:52136803-52136822 Msa0410500:CDS 40.0%
GAGAAAAGAAGTGGGTGAAA+AGG - chr3_2:52136812-52136831 Msa0410500:CDS 40.0%
TATGGAACTATAAAGCGGGA+AGG - chr3_2:52136910-52136929 Msa0410500:CDS 40.0%
! AGAAGGGGTGAAGTTTTTGT+TGG - chr3_2:52136947-52136966 Msa0410500:CDS 40.0%
! TGAAGTTTTTGTTGGACTGC+TGG - chr3_2:52136955-52136974 Msa0410500:CDS 40.0%
GCAAGAAAGGAATGTTGTGA+AGG - chr3_2:52136982-52137001 Msa0410500:CDS 40.0%
AGTAACTACGGTACAACAGT+TGG + chr3_2:52137075-52137094 None:intergenic 40.0%
ATCTGTGGATTCCATCTCTA+CGG + chr3_2:52137768-52137787 None:intergenic 40.0%
ATGAGATGGAATTAGTAGCG+TGG + chr3_2:52137808-52137827 None:intergenic 40.0%
GAGATAAAGTAGCATGCACA+TGG - chr3_2:52137928-52137947 Msa0410500:intron 40.0%
ATGCACATGGATCCTATGTT+TGG - chr3_2:52137941-52137960 Msa0410500:intron 40.0%
! CCGAGAGAATAATTTGTGCA+TGG - chr3_2:52138049-52138068 Msa0410500:intron 40.0%
GGTTTGCAGCTCTACAAATA+TGG + chr3_2:52138093-52138112 None:intergenic 40.0%
CCATGCTAGAGATGATACAA+AGG + chr3_2:52138227-52138246 None:intergenic 40.0%
CCTTTGTATCATCTCTAGCA+TGG - chr3_2:52138224-52138243 Msa0410500:five_prime_UTR 40.0%
TACAATGTCTCAGAGCTCTG+AGG - chr3_2:52131956-52131975 Msa0410500:intron 45.0%
ACAAGTGAACTTCTCATCCG+AGG + chr3_2:52132069-52132088 None:intergenic 45.0%
CCATCGGAACCAACTGATAA+CGG - chr3_2:52132254-52132273 Msa0410500:CDS 45.0%
! ATGAGCAGTTTGTTTGGCCT+TGG - chr3_2:52132315-52132334 Msa0410500:intron 45.0%
!! CAGTTTGTTTGGCCTTGGAT+TGG - chr3_2:52132320-52132339 Msa0410500:intron 45.0%
TTAGGGATGAGTATAGACGC+AGG - chr3_2:52132411-52132430 Msa0410500:intron 45.0%
TAGGGATGAGTATAGACGCA+GGG - chr3_2:52132412-52132431 Msa0410500:intron 45.0%
!! CACAGAGGATTGACTCGATA+TGG + chr3_2:52132446-52132465 None:intergenic 45.0%
CATATCGAGTCAATCCTCTG+TGG - chr3_2:52132444-52132463 Msa0410500:intron 45.0%
AATCCTCTGTGGAATTTCCG+AGG - chr3_2:52132455-52132474 Msa0410500:intron 45.0%
TGCGAGTGCATTATCTAAGC+CGG + chr3_2:52132522-52132541 None:intergenic 45.0%
GCATATGCATCAGACCATCA+CGG - chr3_2:52132551-52132570 Msa0410500:intron 45.0%
CATATGCATCAGACCATCAC+GGG - chr3_2:52132552-52132571 Msa0410500:intron 45.0%
ATCAGACCATCACGGGAAAA+AGG - chr3_2:52132559-52132578 Msa0410500:intron 45.0%
ACCATCACGGGAAAAAGGAT+TGG - chr3_2:52132564-52132583 Msa0410500:intron 45.0%
! ACCAATCCTTTTTCCCGTGA+TGG + chr3_2:52132568-52132587 None:intergenic 45.0%
GTTAATACAGAGCCGAAGTC+GGG - chr3_2:52132590-52132609 Msa0410500:intron 45.0%
CATGCATAAAGACCCGACTT+CGG + chr3_2:52132605-52132624 None:intergenic 45.0%
GAAGTCGGGTCTTTATGCAT+GGG - chr3_2:52132604-52132623 Msa0410500:intron 45.0%
GCTTGTTCTTCCTGAAGTTC+AGG + chr3_2:52132707-52132726 None:intergenic 45.0%
ATCAGGACTTGTGGTAGTTG+TGG - chr3_2:52132925-52132944 Msa0410500:intron 45.0%
TCAGGACTTGTGGTAGTTGT+GGG - chr3_2:52132926-52132945 Msa0410500:intron 45.0%
TGGTTATACAACTGCCAGTG+TGG - chr3_2:52133027-52133046 Msa0410500:intron 45.0%
TTATACAACTGCCAGTGTGG+TGG - chr3_2:52133030-52133049 Msa0410500:intron 45.0%
GGAAATAGCCACATACTGCT+AGG - chr3_2:52133110-52133129 Msa0410500:intron 45.0%
GCAATGATCCTAGCAGTATG+TGG + chr3_2:52133121-52133140 None:intergenic 45.0%
CGAAAAGCTTAAGTCGCAAC+TGG - chr3_2:52133357-52133376 Msa0410500:intron 45.0%
AGAAAAGTGAGCTTGAGTCG+CGG - chr3_2:52133386-52133405 Msa0410500:intron 45.0%
TCATAGTATGCTAGAGGGGA+TGG + chr3_2:52133506-52133525 None:intergenic 45.0%
CCCCTCTAGCATACTATGAT+TGG - chr3_2:52133507-52133526 Msa0410500:CDS 45.0%
TGAGTTAAGCAACAAGGGAC+GGG + chr3_2:52133979-52133998 None:intergenic 45.0%
GTGAGTTAAGCAACAAGGGA+CGG + chr3_2:52133980-52133999 None:intergenic 45.0%
AAATGGCGAACTCCAATGAG+TGG - chr3_2:52134055-52134074 Msa0410500:intron 45.0%
! CTCTTTTCCTCCCTCCAATT+TGG - chr3_2:52134209-52134228 Msa0410500:CDS 45.0%
! CTTTTCCTCCCTCCAATTTG+GGG - chr3_2:52134211-52134230 Msa0410500:CDS 45.0%
! TTTTCCTCCCTCCAATTTGG+GGG - chr3_2:52134212-52134231 Msa0410500:CDS 45.0%
TTACTCCCATACCCCCAAAT+TGG + chr3_2:52134226-52134245 None:intergenic 45.0%
TTGCTTCAGAAGCTTGCAGA+AGG - chr3_2:52134374-52134393 Msa0410500:CDS 45.0%
GAAACTGGCTGAAGATCAGA+AGG - chr3_2:52134502-52134521 Msa0410500:intron 45.0%
CTGAAATGCGAAGACGTATC+TGG + chr3_2:52134930-52134949 None:intergenic 45.0%
GAAGATCATCTGTGCAGAAG+AGG - chr3_2:52134975-52134994 Msa0410500:intron 45.0%
TTCGAGACCAGTAAATCGCT+TGG + chr3_2:52135786-52135805 None:intergenic 45.0%
! GAAAGTGCAGTTGCTTCTCA+AGG + chr3_2:52135917-52135936 None:intergenic 45.0%
GCAACTGCACTTTCTCATTC+TGG - chr3_2:52135923-52135942 Msa0410500:intron 45.0%
TCATTCTGGGTTTGAAAGCC+CGG - chr3_2:52135937-52135956 Msa0410500:intron 45.0%
!! ACCAAAATGAGTGGTAGTGG+GGG - chr3_2:52136100-52136119 Msa0410500:intron 45.0%
! GGGGAGTAGCAATTAGTTTG+TGG - chr3_2:52136120-52136139 Msa0410500:intron 45.0%
AAACTGTCCTAAAGCAGTGG+GGG + chr3_2:52136628-52136647 None:intergenic 45.0%
! TGAAAAGGCATATAGTGCCG+TGG - chr3_2:52136827-52136846 Msa0410500:CDS 45.0%
GAGGTTACATATCTCCCACT+AGG + chr3_2:52136885-52136904 None:intergenic 45.0%
AGGAGAGCAACTTTGCAAGA+AGG - chr3_2:52136930-52136949 Msa0410500:CDS 45.0%
GGAGAGCAACTTTGCAAGAA+GGG - chr3_2:52136931-52136950 Msa0410500:CDS 45.0%
GAGAGCAACTTTGCAAGAAG+GGG - chr3_2:52136932-52136951 Msa0410500:CDS 45.0%
GGCGATGATTAGAATGAGAG+AGG - chr3_2:52137196-52137215 Msa0410500:intron 45.0%
AGAATGAGAGAGGCCTTAAG+TGG - chr3_2:52137206-52137225 Msa0410500:intron 45.0%
GAATGAGAGAGGCCTTAAGT+GGG - chr3_2:52137207-52137226 Msa0410500:intron 45.0%
!! ACTGGTTTCGGATTTTCCGA+TGG + chr3_2:52137245-52137264 None:intergenic 45.0%
AGGCAAAGACAAAGAGGAAG+AGG + chr3_2:52137396-52137415 None:intergenic 45.0%
ATTCCATCTCTACGGTTGTC+CGG + chr3_2:52137760-52137779 None:intergenic 45.0%
! AATAATTTGTGCATGGCGGC+TGG - chr3_2:52138056-52138075 Msa0410500:intron 45.0%
GAGCTGCAAACCGAAGATTA+AGG - chr3_2:52138101-52138120 Msa0410500:intron 45.0%
!! AATGTCTCAGAGCTCTGAGG+AGG - chr3_2:52131959-52131978 Msa0410500:intron 50.0%
GAACTCCTGCAACATGCTTC+TGG - chr3_2:52132131-52132150 Msa0410500:CDS 50.0%
! CCGTTATCAGTTGGTTCCGA+TGG + chr3_2:52132257-52132276 None:intergenic 50.0%
GGCTAGTGGTTCCAAGCTTA+GGG - chr3_2:52132394-52132413 Msa0410500:intron 50.0%
AGGGATGAGTATAGACGCAG+GGG - chr3_2:52132413-52132432 Msa0410500:intron 50.0%
TGACCTCGGAAATTCCACAG+AGG + chr3_2:52132461-52132480 None:intergenic 50.0%
TGGAATTTCCGAGGTCACTC+TGG - chr3_2:52132464-52132483 Msa0410500:intron 50.0%
GCGAGTGCATTATCTAAGCC+GGG + chr3_2:52132521-52132540 None:intergenic 50.0%
CGAAGTCGGGTCTTTATGCA+TGG - chr3_2:52132603-52132622 Msa0410500:intron 50.0%
GGAAGAACAAGCTCGAAAGC+AGG - chr3_2:52132715-52132734 Msa0410500:intron 50.0%
GCAACTTGCAACTGGTGCTT+TGG - chr3_2:52133007-52133026 Msa0410500:intron 50.0%
! TGTGGTGGTTTCTGGACCAA+TGG - chr3_2:52133045-52133064 Msa0410500:intron 50.0%
! GTGGTGGTTTCTGGACCAAT+GGG - chr3_2:52133046-52133065 Msa0410500:intron 50.0%
ACAATCAAGGGGGATCTGAC+AGG - chr3_2:52133084-52133103 Msa0410500:intron 50.0%
GCGCTAAGGATCACTTCCAA+AGG - chr3_2:52133320-52133339 Msa0410500:intron 50.0%
GTTGCTAGAAGAGATGGAGG+AGG - chr3_2:52133459-52133478 Msa0410500:CDS 50.0%
TCTGGAAAGAGTCGGAAGAC+TGG - chr3_2:52133756-52133775 Msa0410500:intron 50.0%
CACAAGTGATGTGGAACGGA+TGG - chr3_2:52133997-52134016 Msa0410500:intron 50.0%
! TCCCTCCAATTTGGGGGTAT+GGG - chr3_2:52134218-52134237 Msa0410500:CDS 50.0%
TCCCATACCCCCAAATTGGA+GGG + chr3_2:52134222-52134241 None:intergenic 50.0%
CTCTCTTCAGATGGCTTCTC+TGG - chr3_2:52134451-52134470 Msa0410500:intron 50.0%
GCATATGGGTTTGAGGGAGA+AGG - chr3_2:52134789-52134808 Msa0410500:intron 50.0%
ACTGTCCAACGTCGCTTGAA+AGG - chr3_2:52135275-52135294 Msa0410500:intron 50.0%
GTGAACCTTTCAAGCGACGT+TGG + chr3_2:52135283-52135302 None:intergenic 50.0%
AGAATGGGGGAACTTGACAC+TGG - chr3_2:52135479-52135498 Msa0410500:intron 50.0%
!! CCAAAATGAGTGGTAGTGGG+GGG - chr3_2:52136101-52136120 Msa0410500:intron 50.0%
TAAAAGCAGGAGAGGAAGGG+TGG - chr3_2:52136153-52136172 Msa0410500:intron 50.0%
TCATTTCCCCCCACTGCTTT+AGG - chr3_2:52136618-52136637 Msa0410500:CDS 50.0%
AACTGTCCTAAAGCAGTGGG+GGG + chr3_2:52136627-52136646 None:intergenic 50.0%
! AAAGGCATATAGTGCCGTGG+TGG - chr3_2:52136830-52136849 Msa0410500:CDS 50.0%
TGCCGTGGTGGCATCTTTAA+CGG - chr3_2:52136842-52136861 Msa0410500:CDS 50.0%
CTCCGTTAAAGATGCCACCA+CGG + chr3_2:52136847-52136866 None:intergenic 50.0%
GACTGCTGGAAACGCAAGAA+AGG - chr3_2:52136969-52136988 Msa0410500:CDS 50.0%
CAAAGCCAAACCCTTTGGTG+GGG + chr3_2:52137345-52137364 None:intergenic 50.0%
CCAAAGCCAAACCCTTTGGT+GGG + chr3_2:52137346-52137365 None:intergenic 50.0%
ACCAAAGCCAAACCCTTTGG+TGG + chr3_2:52137347-52137366 None:intergenic 50.0%
GACACCAAAGCCAAACCCTT+TGG + chr3_2:52137350-52137369 None:intergenic 50.0%
TGTTGAAATTGAGCAGCGGC+CGG - chr3_2:52137738-52137757 Msa0410500:intron 50.0%
CTGCAACATGCTTCTGGCGT+GGG - chr3_2:52132137-52132156 Msa0410500:CDS 55.0%
CCATCTTGTGCCCTGCTAGT+GGG + chr3_2:52132362-52132381 None:intergenic 55.0%
CCACTAGCAGGGCACAAGAT+GGG - chr3_2:52132360-52132379 Msa0410500:intron 55.0%
! CACAAGATGGGCGTGCTGTT+GGG - chr3_2:52132372-52132391 Msa0410500:intron 55.0%
! ACAAGATGGGCGTGCTGTTG+GGG - chr3_2:52132373-52132392 Msa0410500:intron 55.0%
! GGGCTAGTGGTTCCAAGCTT+AGG - chr3_2:52132393-52132412 Msa0410500:intron 55.0%
ACTGCCAGTGTGGTGGTTTC+TGG - chr3_2:52133037-52133056 Msa0410500:intron 55.0%
TGGTCCAGAAACCACCACAC+TGG + chr3_2:52133044-52133063 None:intergenic 55.0%
TGAGTCGCGGAGAATCGCAT+TGG - chr3_2:52133399-52133418 Msa0410500:intron 55.0%
CATACCCCCAAATTGGAGGG+AGG + chr3_2:52134219-52134238 None:intergenic 55.0%
CTCCCTCCAATTTGGGGGTA+TGG - chr3_2:52134217-52134236 Msa0410500:CDS 55.0%
CTCCCATACCCCCAAATTGG+AGG + chr3_2:52134223-52134242 None:intergenic 55.0%
ATGACCAGACAGCCAAGCGT+AGG - chr3_2:52135854-52135873 Msa0410500:intron 55.0%
TCTGGGTTTGAAAGCCCGGA+AGG - chr3_2:52135941-52135960 Msa0410500:intron 55.0%
! CCCCCCACTACCACTCATTT+TGG + chr3_2:52136104-52136123 None:intergenic 55.0%
AACCCTTTGGTGGGGTGTGA+CGG + chr3_2:52137337-52137356 None:intergenic 55.0%
TCACACCCCACCAAAGGGTT+TGG - chr3_2:52137337-52137356 Msa0410500:intron 55.0%
! CCCACCAAAGGGTTTGGCTT+TGG - chr3_2:52137343-52137362 Msa0410500:intron 55.0%
! CCACGCCAGAAGCATGTTGC+AGG + chr3_2:52132139-52132158 None:intergenic 60.0%
CCTGCAACATGCTTCTGGCG+TGG - chr3_2:52132136-52132155 Msa0410500:CDS 60.0%
CCCACTAGCAGGGCACAAGA+TGG - chr3_2:52132359-52132378 Msa0410500:intron 60.0%
CCCATCTTGTGCCCTGCTAG+TGG + chr3_2:52132363-52132382 None:intergenic 60.0%
GCACAAGATGGGCGTGCTGT+TGG - chr3_2:52132371-52132390 Msa0410500:intron 60.0%
TCACTCTGGTACCGCCCTTG+TGG - chr3_2:52132478-52132497 Msa0410500:intron 60.0%
CAAGGGGGATCTGACAGGTC+CGG - chr3_2:52133089-52133108 Msa0410500:intron 60.0%
CAGTTACTGGCGCCTACGCT+TGG + chr3_2:52135869-52135888 None:intergenic 60.0%
ATGCCGTCACACCCCACCAA+AGG - chr3_2:52137331-52137350 Msa0410500:intron 60.0%
TGCCGTCACACCCCACCAAA+GGG - chr3_2:52137332-52137351 Msa0410500:intron 60.0%
GGGCGGTACCAGAGTGACCT+CGG + chr3_2:52132475-52132494 None:intergenic 65.0%
CGGCCGGACAACCGTAGAGA+TGG - chr3_2:52137754-52137773 Msa0410500:intron 65.0%
! GGGCGTGCTGTTGGGGCTAG+TGG - chr3_2:52132380-52132399 Msa0410500:intron 70.0%
GGCGCCTACGCTTGGCTGTC+TGG + chr3_2:52135861-52135880 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 52130673 52138398 52130673 ID=Msa0410500;Name=Msa0410500
chr3_2 mRNA 52130673 52138398 52130673 ID=Msa0410500-mRNA-1;Parent=Msa0410500;Name=Msa0410500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=242|1|1|1|0.71|0.5|8|372|639
chr3_2 exon 52130673 52131042 52130673 ID=Msa0410500-mRNA-1:exon:10319;Parent=Msa0410500-mRNA-1
chr3_2 exon 52132068 52132297 52132068 ID=Msa0410500-mRNA-1:exon:10318;Parent=Msa0410500-mRNA-1
chr3_2 exon 52133425 52133634 52133425 ID=Msa0410500-mRNA-1:exon:10317;Parent=Msa0410500-mRNA-1
chr3_2 exon 52134159 52134446 52134159 ID=Msa0410500-mRNA-1:exon:10316;Parent=Msa0410500-mRNA-1
chr3_2 exon 52134548 52134637 52134548 ID=Msa0410500-mRNA-1:exon:10315;Parent=Msa0410500-mRNA-1
chr3_2 exon 52135591 52135772 52135591 ID=Msa0410500-mRNA-1:exon:10314;Parent=Msa0410500-mRNA-1
chr3_2 exon 52136190 52137138 52136190 ID=Msa0410500-mRNA-1:exon:10313;Parent=Msa0410500-mRNA-1
chr3_2 exon 52138184 52138398 52138184 ID=Msa0410500-mRNA-1:exon:10312;Parent=Msa0410500-mRNA-1
chr3_2 five_prime_UTR 52138184 52138398 52138184 ID=Msa0410500-mRNA-1:five_prime_utr;Parent=Msa0410500-mRNA-1
chr3_2 five_prime_UTR 52137112 52137138 52137112 ID=Msa0410500-mRNA-1:five_prime_utr;Parent=Msa0410500-mRNA-1
chr3_2 CDS 52136190 52137111 52136190 ID=Msa0410500-mRNA-1:cds;Parent=Msa0410500-mRNA-1
chr3_2 CDS 52135591 52135772 52135591 ID=Msa0410500-mRNA-1:cds;Parent=Msa0410500-mRNA-1
chr3_2 CDS 52134548 52134637 52134548 ID=Msa0410500-mRNA-1:cds;Parent=Msa0410500-mRNA-1
chr3_2 CDS 52134159 52134446 52134159 ID=Msa0410500-mRNA-1:cds;Parent=Msa0410500-mRNA-1
chr3_2 CDS 52133425 52133634 52133425 ID=Msa0410500-mRNA-1:cds;Parent=Msa0410500-mRNA-1
chr3_2 CDS 52132070 52132297 52132070 ID=Msa0410500-mRNA-1:cds;Parent=Msa0410500-mRNA-1
chr3_2 three_prime_UTR 52132068 52132069 52132068 ID=Msa0410500-mRNA-1:three_prime_utr;Parent=Msa0410500-mRNA-1
chr3_2 three_prime_UTR 52130673 52131042 52130673 ID=Msa0410500-mRNA-1:three_prime_utr;Parent=Msa0410500-mRNA-1
Gene Sequence

>Msa0410500

ATGTCTCAGAGCTCTGAGGAGGATACTGATATAAGTGATTCTGAGATAAGTGAGTATGAGGAAAAATGTTATGAAGAACTGAAAAGTGGAAGTCAGAATGTGAAAACCTCGGATGAGAAGTTCACTTGTCCATACTGTCCTAAGAAAAGAAAACGGGATTATTTGTACAACGAACTCCTGCAACATGCTTCTGGCGTGGGTCAGAGTAGTTCACAGAAGAGAAAGCCAAGAGAAAAGGCTACTCATTTGGCTTTAGTGAAATATTTGGAAAAGGATCTTATGAATATAGATACTCCATCGGAACCAACTGATAACGGTGCTGATAACGGTGACACAGACACTTCTATTGATTCTGATGAGCAGTTTGTTTGGCCTTGGATTGGAGTTATAGTTAATATTCCCACTAGCAGGGCACAAGATGGGCGTGCTGTTGGGGCTAGTGGTTCCAAGCTTAGGGATGAGTATAGACGCAGGGGTTTCAATCCATATCGAGTCAATCCTCTGTGGAATTTCCGAGGTCACTCTGGTACCGCCCTTGTGGAATTCTATAAAGACTGGCCCGGCTTAGATAATGCACTCGCATTTGAAAAAGCATATGCATCAGACCATCACGGGAAAAAGGATTGGTTTGTTAATACAGAGCCGAAGTCGGGTCTTTATGCATGGGTTGCCCGAGCTGATGACTACAAAAAGAACAATATCATTGGTGAATATCTGCGAAAGATGGGCGATATCAAAACCATACCTGAACTTCAGGAAGAACAAGCTCGAAAGCAGGATAAACTCGTGTCCAATTTGACCAACATTATTGAGGTCAAAAACAAGCACTTAATTGAGATAGAAGCAAGATGCACTGAGACTACAGCCAAAATGAATTCTGCTATGACAGAAAAAGATCAGCTCATTCAAGCTTATAATGAAGAGATAAAGAAAATACAGTCAAGCGCTAAGGATCACTTCCAAAGGATTTTTAATGATCACGAAAAGCTTAAGTCGCAACTGGAAACTCAGAAAAGTGAGCTTGAGTCGCGGAGAATCGCATTGGAAAAGCGTGAAGCACATAATGAAAGTGAAAGAAGAAAGTTGCTAGAAGAGATGGAGGAGAATGCAACGAGAAATAGCTCTCTTCAGATGGCTTCTCTGGAGCAACAGAAAGCAGATATAAATGTTATGAAACTGGCTGAAGATCAGAAGAAACAAAAAGAACAGCTCCATGCTAAAATCATTCAGCTTGAAAGACAACTAGATATGAAACAAAAGCTGGAACTGGAGATTCAGCAACTAAAAGGATCACTAAGTGTGTTGAAGCACATAGAAGATGACGAAGATGTAGAAGTTTTGAAGAAGGTAGATGATTTGCATATGGGTTTGAGGGAGAAGGAACAGTCTCTTCAAGACTTAGATGCACTGAACCAAACACTAATCATCAAGGAGCGTAAGAGTAACGATGAACTGCAGGATGCTCGAAAAGAATTGATTAATGGCATTAAAGATATAGGTACTCGAGTCCATATTGGTGTGAAGAGAATGGGGGAACTTGACACTGGACCGTTCCTTGAAGCTATGAAGAAAAGATATAATGAGGAGGAAGCTGAAGACAAAGCTTCAGAACTATGTTCATTGTGGGAAGAGTATCTAAAAGACCCAGATTGGCATCCATTCAAAGTTGTCATGATTGAAGGGAAAGAAAAGGAAATTATTAAAGATGACGATGAAAAGCTGAATGGACTGAGAAAAGAAGTGGGTGAAAAGGCATATAGTGCCGTGGTGGCATCTTTAACGGAGATTAATGAATATAATCCTAGTGGGAGATATGTAACCTCAGAGTTATGGAACTATAAAGCGGGAAGGAGAGCAACTTTGCAAGAAGGGGTGAAGTTTTTGTTGGACTGCTGGAAACGCAAGAAAGGAATGTTGTGA

Protein sequence

>Msa0410500

MSQSSEEDTDISDSEISEYEEKCYEELKSGSQNVKTSDEKFTCPYCPKKRKRDYLYNELLQHASGVGQSSSQKRKPREKATHLALVKYLEKDLMNIDTPSEPTDNGADNGDTDTSIDSDEQFVWPWIGVIVNIPTSRAQDGRAVGASGSKLRDEYRRRGFNPYRVNPLWNFRGHSGTALVEFYKDWPGLDNALAFEKAYASDHHGKKDWFVNTEPKSGLYAWVARADDYKKNNIIGEYLRKMGDIKTIPELQEEQARKQDKLVSNLTNIIEVKNKHLIEIEARCTETTAKMNSAMTEKDQLIQAYNEEIKKIQSSAKDHFQRIFNDHEKLKSQLETQKSELESRRIALEKREAHNESERRKLLEEMEENATRNSSLQMASLEQQKADINVMKLAEDQKKQKEQLHAKIIQLERQLDMKQKLELEIQQLKGSLSVLKHIEDDEDVEVLKKVDDLHMGLREKEQSLQDLDALNQTLIIKERKSNDELQDARKELINGIKDIGTRVHIGVKRMGELDTGPFLEAMKKRYNEEEAEDKASELCSLWEEYLKDPDWHPFKVVMIEGKEKEIIKDDDEKLNGLRKEVGEKAYSAVVASLTEINEYNPSGRYVTSELWNYKAGRRATLQEGVKFLLDCWKRKKGML*