Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002540.t1 | XP_003593713.2 | 97.4 | 196 | 5 | 0 | 1 | 196 | 1 | 196 | 3.10E-103 | 384.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002540.t1 | P0C8K6 | 55.0 | 191 | 75 | 3 | 6 | 190 | 309 | 494 | 1.7e-49 | 197.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002540.t1 | G7IK82 | 97.4 | 196 | 5 | 0 | 1 | 196 | 1 | 196 | 2.3e-103 | 384.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene009509 | MS.gene002540 | PPI |
MS.gene51967 | MS.gene002540 | PPI |
MS.gene51964 | MS.gene002540 | PPI |
MS.gene92650 | MS.gene002540 | PPI |
MS.gene40016 | MS.gene002540 | PPI |
MS.gene63427 | MS.gene002540 | PPI |
MS.gene32083 | MS.gene002540 | PPI |
MS.gene51687 | MS.gene002540 | PPI |
MS.gene002540 | MS.gene019081 | PPI |
MS.gene004699 | MS.gene002540 | PPI |
MS.gene95934 | MS.gene002540 | PPI |
MS.gene036254 | MS.gene002540 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002540.t1 | MTR_2g015360 | 97.449 | 196 | 5 | 0 | 1 | 196 | 1 | 196 | 3.14e-142 | 394 |
MS.gene002540.t1 | MTR_3g035710 | 53.543 | 127 | 53 | 3 | 60 | 185 | 1 | 122 | 7.93e-34 | 117 |
MS.gene002540.t1 | MTR_0002s0800 | 52.066 | 121 | 52 | 3 | 66 | 185 | 1 | 116 | 3.03e-29 | 108 |
MS.gene002540.t1 | MTR_0002s0360 | 52.066 | 121 | 52 | 3 | 66 | 185 | 1 | 116 | 3.03e-29 | 108 |
MS.gene002540.t1 | MTR_3g037420 | 50.442 | 113 | 50 | 3 | 74 | 185 | 10 | 117 | 5.56e-25 | 95.1 |
MS.gene002540.t1 | MTR_4g051430 | 46.512 | 129 | 43 | 4 | 58 | 185 | 259 | 362 | 3.24e-23 | 95.5 |
MS.gene002540.t1 | MTR_8g102110 | 50.000 | 98 | 46 | 2 | 69 | 165 | 13 | 108 | 6.01e-22 | 86.7 |
MS.gene002540.t1 | MTR_7g076940 | 40.171 | 117 | 64 | 3 | 51 | 161 | 98 | 214 | 1.47e-18 | 81.3 |
MS.gene002540.t1 | MTR_5g021800 | 38.462 | 117 | 66 | 3 | 51 | 161 | 98 | 214 | 7.51e-18 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002540.t1 | AT2G44065 | 63.265 | 196 | 68 | 3 | 1 | 192 | 5 | 200 | 8.98e-81 | 239 |
MS.gene002540.t1 | AT2G44065 | 63.265 | 196 | 68 | 3 | 1 | 192 | 5 | 200 | 8.98e-81 | 239 |
MS.gene002540.t1 | AT2G44065 | 63.265 | 196 | 68 | 3 | 1 | 192 | 5 | 200 | 8.98e-81 | 239 |
MS.gene002540.t1 | ATCG00830 | 49.296 | 142 | 66 | 3 | 45 | 185 | 118 | 254 | 7.92e-35 | 124 |
MS.gene002540.t1 | ATCG01310 | 49.296 | 142 | 66 | 3 | 45 | 185 | 118 | 254 | 7.92e-35 | 124 |
MS.gene002540.t1 | AT3G51190 | 44.167 | 120 | 61 | 3 | 48 | 161 | 96 | 215 | 5.68e-23 | 92.8 |
MS.gene002540.t1 | AT2G18020 | 40.171 | 117 | 64 | 3 | 51 | 161 | 98 | 214 | 2.29e-19 | 83.2 |
MS.gene002540.t1 | AT4G36130 | 39.316 | 117 | 65 | 3 | 51 | 161 | 98 | 214 | 1.70e-18 | 80.9 |
Find 67 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATCGGAGACCGGTTGTTC+GGG | 0.303224 | 2.1:+70037216 | MS.gene002540:CDS |
GAAAGGTTCCCGCACTCCTT+GGG | 0.303625 | 2.1:+70037312 | MS.gene002540:CDS |
GGCAAGGTGGAAAGCTTGTT+CGG | 0.328555 | 2.1:+70037017 | MS.gene002540:CDS |
GGAAAGGTTCCCGCACTCCT+TGG | 0.342701 | 2.1:+70037311 | MS.gene002540:CDS |
TCAATCGGAGACCGGTTGTT+CGG | 0.360479 | 2.1:+70037215 | MS.gene002540:CDS |
ACAAGCTTTCCACCTTGCCC+TGG | 0.376766 | 2.1:-70037013 | None:intergenic |
GCTCTTCGCCGTTTCTCTAC+TGG | 0.378938 | 2.1:+70036499 | MS.gene002540:CDS |
CCTCTCTCTTCAATGCGAAT+TGG | 0.385769 | 2.1:+70036962 | MS.gene002540:CDS |
CCCAATCTGTGAGTTTATAT+CGG | 0.390437 | 2.1:-70036930 | None:intergenic |
CTCTTTCAAGATCTTTGCAT+TGG | 0.403607 | 2.1:-70037050 | None:intergenic |
GGAAAGCTTGTTCGGGCAGC+TGG | 0.433411 | 2.1:+70037025 | MS.gene002540:CDS |
CCACCATGAGGATGATCAAC+AGG | 0.434719 | 2.1:-70037253 | None:intergenic |
TCCGATATAAACTCACAGAT+TGG | 0.434854 | 2.1:+70036929 | MS.gene002540:CDS |
GCAAGAGTAGTGGTGGGTGG+GGG | 0.456389 | 2.1:+70037290 | MS.gene002540:CDS |
GCAAGGTGGAAAGCTTGTTC+GGG | 0.464379 | 2.1:+70037018 | MS.gene002540:CDS |
TCCTTGGGGTAAGCCAACTA+AGG | 0.465838 | 2.1:+70037327 | MS.gene002540:CDS |
CAAGCTTTCCACCTTGCCCT+GGG | 0.466095 | 2.1:-70037012 | None:intergenic |
AGCAAGAGTAGTGGTGGGTG+GGG | 0.467612 | 2.1:+70037289 | MS.gene002540:CDS |
GTCATAGCAGATGGCTCAAT+CGG | 0.474048 | 2.1:+70037200 | MS.gene002540:CDS |
GTCTTGAAACCACCCTTAGT+TGG | 0.475603 | 2.1:-70037340 | None:intergenic |
ATAGCCACACCCCGAACAAC+CGG | 0.484023 | 2.1:-70037226 | None:intergenic |
GAGCAAGAGTAGTGGTGGGT+GGG | 0.491341 | 2.1:+70037288 | MS.gene002540:CDS |
CCGATATAAACTCACAGATT+GGG | 0.494054 | 2.1:+70036930 | MS.gene002540:CDS |
ACCTACTTTCTGCGCTTAAG+AGG | 0.496195 | 2.1:-70037367 | None:intergenic |
GACTAAAACGTATGCTGATG+TGG | 0.504252 | 2.1:-70037074 | None:intergenic |
ACTAAGGGTGGTTTCAAGAC+TGG | 0.508103 | 2.1:+70037343 | MS.gene002540:CDS |
CATCCTCATGGTGGAGGAGA+GGG | 0.510436 | 2.1:+70037262 | MS.gene002540:CDS |
GGCAAGAGCAAGAGTAGTGG+TGG | 0.514209 | 2.1:+70037283 | MS.gene002540:CDS |
GGTTTCAAACGGTATTCCTC+AGG | 0.517827 | 2.1:+70036883 | MS.gene002540:CDS |
AGAGAAACGGCGAAGAGCAT+TGG | 0.520863 | 2.1:-70036494 | None:intergenic |
CACAACATTGAGCTGAACCC+AGG | 0.522651 | 2.1:+70036995 | MS.gene002540:CDS |
AGCTTGCGATCACCGTGAGT+TGG | 0.524709 | 2.1:-70037166 | None:intergenic |
CCCTTAGTTGGCTTACCCCA+AGG | 0.529403 | 2.1:-70037328 | None:intergenic |
CGGTGATCGCAAGCTTAAGA+AGG | 0.531996 | 2.1:+70037174 | MS.gene002540:CDS |
TGGCTTACCCCAAGGAGTGC+GGG | 0.536501 | 2.1:-70037320 | None:intergenic |
AGTTGATTGATACTCGATGC+AGG | 0.537593 | 2.1:+70037119 | MS.gene002540:CDS |
GAGACCGGTTGTTCGGGGTG+TGG | 0.544072 | 2.1:+70037222 | MS.gene002540:CDS |
TGAGAGTACCAGTAGAGAAA+CGG | 0.550395 | 2.1:-70036507 | None:intergenic |
ATCCTCTCGCGTGCCTCCTG+AGG | 0.558960 | 2.1:-70036899 | None:intergenic |
AGAGCAAGAGTAGTGGTGGG+TGG | 0.571408 | 2.1:+70037287 | MS.gene002540:CDS |
CAGATGGCTCAATCGGAGAC+CGG | 0.579156 | 2.1:+70037207 | MS.gene002540:CDS |
GATCGCAAGCTTAAGAAGGC+TGG | 0.579493 | 2.1:+70037178 | MS.gene002540:CDS |
AAAGGTTCCCGCACTCCTTG+GGG | 0.579787 | 2.1:+70037313 | MS.gene002540:CDS |
GTTGATCATCCTCATGGTGG+AGG | 0.581691 | 2.1:+70037256 | MS.gene002540:CDS |
AGAAGGCTGGTCATAGCAGA+TGG | 0.589752 | 2.1:+70037191 | MS.gene002540:CDS |
ATTGAGCTGAACCCAGGGCA+AGG | 0.590026 | 2.1:+70037001 | MS.gene002540:CDS |
ACCTCTTAAGCGCAGAAAGT+AGG | 0.597433 | 2.1:+70037366 | MS.gene002540:CDS |
CCAATTCGCATTGAAGAGAG+AGG | 0.603282 | 2.1:-70036962 | None:intergenic |
TGGGGTAAGCCAACTAAGGG+TGG | 0.604152 | 2.1:+70037331 | MS.gene002540:CDS |
AATCGGAGACCGGTTGTTCG+GGG | 0.609554 | 2.1:+70037217 | MS.gene002540:CDS |
ACAACATTGAGCTGAACCCA+GGG | 0.610164 | 2.1:+70036996 | MS.gene002540:CDS |
GAGGGCAAGAGCAAGAGTAG+TGG | 0.611159 | 2.1:+70037280 | MS.gene002540:CDS |
TCATCCTCATGGTGGAGGAG+AGG | 0.611896 | 2.1:+70037261 | MS.gene002540:CDS |
TTGGCTTACCCCAAGGAGTG+CGG | 0.612529 | 2.1:-70037321 | None:intergenic |
TTCAAACGGTATTCCTCAGG+AGG | 0.616156 | 2.1:+70036886 | MS.gene002540:CDS |
TTGCCCTCTCCTCCACCATG+AGG | 0.616499 | 2.1:-70037265 | None:intergenic |
CCTTGGGGTAAGCCAACTAA+GGG | 0.618496 | 2.1:+70037328 | MS.gene002540:CDS |
AATCCTGTTGATCATCCTCA+TGG | 0.627342 | 2.1:+70037250 | MS.gene002540:CDS |
ACTCGATGCAGGGCCACTGT+CGG | 0.629111 | 2.1:+70037130 | MS.gene002540:CDS |
GTTGATTGATACTCGATGCA+GGG | 0.629838 | 2.1:+70037120 | MS.gene002540:CDS |
GCAAGAGCAAGAGTAGTGGT+GGG | 0.633900 | 2.1:+70037284 | MS.gene002540:CDS |
TTCCTCAGGAGGCACGCGAG+AGG | 0.634562 | 2.1:+70036897 | MS.gene002540:CDS |
ACTAAAACGTATGCTGATGT+GGG | 0.662637 | 2.1:-70037073 | None:intergenic |
CCTGTTGATCATCCTCATGG+TGG | 0.678152 | 2.1:+70037253 | MS.gene002540:CDS |
ACTGTCTCTAATCCAACTCA+CGG | 0.682936 | 2.1:+70037154 | MS.gene002540:CDS |
GAGCTGAACCCAGGGCAAGG+TGG | 0.703850 | 2.1:+70037004 | MS.gene002540:CDS |
ATTAGAGACAGTACCGACAG+TGG | 0.717055 | 2.1:-70037143 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAATATTGATCTAAACAT+TGG | - | chr2.1:70036570-70036589 | None:intergenic | 20.0% |
!! | GAAATAAATTATGTAGCTTT+GGG | + | chr2.1:70036620-70036639 | MS.gene002540:intron | 20.0% |
!! | TGAAATAAATTATGTAGCTT+TGG | + | chr2.1:70036619-70036638 | MS.gene002540:intron | 20.0% |
!!! | AAATAAATTATGTAGCTTTG+GGG | + | chr2.1:70036621-70036640 | MS.gene002540:intron | 20.0% |
!!! | CTAGTTGAATCATTTAATTT+CGG | + | chr2.1:70036803-70036822 | MS.gene002540:intron | 20.0% |
! | ATCAACTTTTTAACACCAGA+TGG | - | chr2.1:70037106-70037125 | None:intergenic | 30.0% |
! | CTGCTTTAAACTACTTGATT+TGG | + | chr2.1:70036719-70036738 | MS.gene002540:intron | 30.0% |
! | TGAATCATTTAATTTCGGCT+CGG | + | chr2.1:70036808-70036827 | MS.gene002540:intron | 30.0% |
! | TTTTAACACCAGATGGTAAT+TGG | - | chr2.1:70037099-70037118 | None:intergenic | 30.0% |
!!! | TTTTTAGCTGAGGTTTCAAA+CGG | + | chr2.1:70036872-70036891 | MS.gene002540:intron | 30.0% |
AACCAATATTGTCCATGGTT+CGG | - | chr2.1:70036773-70036792 | None:intergenic | 35.0% | |
ACTAAAACGTATGCTGATGT+GGG | - | chr2.1:70037076-70037095 | None:intergenic | 35.0% | |
CCCAATCTGTGAGTTTATAT+CGG | - | chr2.1:70036933-70036952 | None:intergenic | 35.0% | |
CCGATATAAACTCACAGATT+GGG | + | chr2.1:70036930-70036949 | MS.gene002540:CDS | 35.0% | |
CTCTTTCAAGATCTTTGCAT+TGG | - | chr2.1:70037053-70037072 | None:intergenic | 35.0% | |
TCCGATATAAACTCACAGAT+TGG | + | chr2.1:70036929-70036948 | MS.gene002540:CDS | 35.0% | |
TTGTGAACCAATATTGTCCA+TGG | - | chr2.1:70036778-70036797 | None:intergenic | 35.0% | |
! | TTGGGGTTTAGGTTCAATTA+TGG | + | chr2.1:70036638-70036657 | MS.gene002540:intron | 35.0% |
!! | ATTATGTAGCTTTGGGGTTT+AGG | + | chr2.1:70036627-70036646 | MS.gene002540:intron | 35.0% |
!! | GTTTTAGTCCAATTACCATC+TGG | + | chr2.1:70037088-70037107 | MS.gene002540:CDS | 35.0% |
!!! | TCTGTTTGTCTTTTTAGCTG+AGG | + | chr2.1:70036862-70036881 | MS.gene002540:intron | 35.0% |
AAATGGTCCTATGTCTGGTT+CGG | - | chr2.1:70036685-70036704 | None:intergenic | 40.0% | |
AACCAGACATAGGACCATTT+GGG | + | chr2.1:70036685-70036704 | MS.gene002540:intron | 40.0% | |
AACCGAACCATGGACAATAT+TGG | + | chr2.1:70036768-70036787 | MS.gene002540:intron | 40.0% | |
AATCCTGTTGATCATCCTCA+TGG | + | chr2.1:70037250-70037269 | MS.gene002540:CDS | 40.0% | |
ACTGTCTCTAATCCAACTCA+CGG | + | chr2.1:70037154-70037173 | MS.gene002540:CDS | 40.0% | |
AGTTGATTGATACTCGATGC+AGG | + | chr2.1:70037119-70037138 | MS.gene002540:CDS | 40.0% | |
CTGTTCAAATAACCGAACCA+TGG | + | chr2.1:70036758-70036777 | MS.gene002540:intron | 40.0% | |
GACTAAAACGTATGCTGATG+TGG | - | chr2.1:70037077-70037096 | None:intergenic | 40.0% | |
GTTGATTGATACTCGATGCA+GGG | + | chr2.1:70037120-70037139 | MS.gene002540:CDS | 40.0% | |
TCAAAAACCGAACCAGACAT+AGG | + | chr2.1:70036675-70036694 | MS.gene002540:intron | 40.0% | |
!! | TGAGAGTACCAGTAGAGAAA+CGG | - | chr2.1:70036510-70036529 | None:intergenic | 40.0% |
ACAACATTGAGCTGAACCCA+GGG | + | chr2.1:70036996-70037015 | MS.gene002540:CDS | 45.0% | |
ACATAGGACCATTTGGGTCA+TGG | + | chr2.1:70036691-70036710 | MS.gene002540:intron | 45.0% | |
ACTAAGGGTGGTTTCAAGAC+TGG | + | chr2.1:70037343-70037362 | MS.gene002540:CDS | 45.0% | |
CAGTTGAACCATGACCCAAA+TGG | - | chr2.1:70036702-70036721 | None:intergenic | 45.0% | |
CCAATTCGCATTGAAGAGAG+AGG | - | chr2.1:70036965-70036984 | None:intergenic | 45.0% | |
CCTCTCTCTTCAATGCGAAT+TGG | + | chr2.1:70036962-70036981 | MS.gene002540:CDS | 45.0% | |
GAACCAGACATAGGACCATT+TGG | + | chr2.1:70036684-70036703 | MS.gene002540:intron | 45.0% | |
GGTTTCAAACGGTATTCCTC+AGG | + | chr2.1:70036883-70036902 | MS.gene002540:CDS | 45.0% | |
GTCATAGCAGATGGCTCAAT+CGG | + | chr2.1:70037200-70037219 | MS.gene002540:CDS | 45.0% | |
GTCTTGAAACCACCCTTAGT+TGG | - | chr2.1:70037343-70037362 | None:intergenic | 45.0% | |
TTCAAACGGTATTCCTCAGG+AGG | + | chr2.1:70036886-70036905 | MS.gene002540:CDS | 45.0% | |
!! | ATTAGAGACAGTACCGACAG+TGG | - | chr2.1:70037146-70037165 | None:intergenic | 45.0% |
CACAACATTGAGCTGAACCC+AGG | + | chr2.1:70036995-70037014 | MS.gene002540:CDS | 50.0% | |
CCACCATGAGGATGATCAAC+AGG | - | chr2.1:70037256-70037275 | None:intergenic | 50.0% | |
CCTGTTGATCATCCTCATGG+TGG | + | chr2.1:70037253-70037272 | MS.gene002540:CDS | 50.0% | |
CCTTGGGGTAAGCCAACTAA+GGG | + | chr2.1:70037328-70037347 | MS.gene002540:CDS | 50.0% | |
CGGTGATCGCAAGCTTAAGA+AGG | + | chr2.1:70037174-70037193 | MS.gene002540:CDS | 50.0% | |
GACCCAAATGGTCCTATGTC+TGG | - | chr2.1:70036690-70036709 | None:intergenic | 50.0% | |
GATCGCAAGCTTAAGAAGGC+TGG | + | chr2.1:70037178-70037197 | MS.gene002540:CDS | 50.0% | |
GCAAGAGCAAGAGTAGTGGT+GGG | + | chr2.1:70037284-70037303 | MS.gene002540:CDS | 50.0% | |
GTTGATCATCCTCATGGTGG+AGG | + | chr2.1:70037256-70037275 | MS.gene002540:CDS | 50.0% | |
TCAATCGGAGACCGGTTGTT+CGG | + | chr2.1:70037215-70037234 | MS.gene002540:CDS | 50.0% | |
TCCTTGGGGTAAGCCAACTA+AGG | + | chr2.1:70037327-70037346 | MS.gene002540:CDS | 50.0% | |
! | AGAAGGCTGGTCATAGCAGA+TGG | + | chr2.1:70037191-70037210 | MS.gene002540:CDS | 50.0% |
! | AGAGAAACGGCGAAGAGCAT+TGG | - | chr2.1:70036497-70036516 | None:intergenic | 50.0% |
! | GCAAGGTGGAAAGCTTGTTC+GGG | + | chr2.1:70037018-70037037 | MS.gene002540:CDS | 50.0% |
! | GGCAAGGTGGAAAGCTTGTT+CGG | + | chr2.1:70037017-70037036 | MS.gene002540:CDS | 50.0% |
AAAGGTTCCCGCACTCCTTG+GGG | + | chr2.1:70037313-70037332 | MS.gene002540:CDS | 55.0% | |
AATCGGAGACCGGTTGTTCG+GGG | + | chr2.1:70037217-70037236 | MS.gene002540:CDS | 55.0% | |
ACAAGCTTTCCACCTTGCCC+TGG | - | chr2.1:70037016-70037035 | None:intergenic | 55.0% | |
AGCTTGCGATCACCGTGAGT+TGG | - | chr2.1:70037169-70037188 | None:intergenic | 55.0% | |
ATAGCCACACCCCGAACAAC+CGG | - | chr2.1:70037229-70037248 | None:intergenic | 55.0% | |
ATTGAGCTGAACCCAGGGCA+AGG | + | chr2.1:70037001-70037020 | MS.gene002540:CDS | 55.0% | |
CAAGCTTTCCACCTTGCCCT+GGG | - | chr2.1:70037015-70037034 | None:intergenic | 55.0% | |
CAATCGGAGACCGGTTGTTC+GGG | + | chr2.1:70037216-70037235 | MS.gene002540:CDS | 55.0% | |
CAGATGGCTCAATCGGAGAC+CGG | + | chr2.1:70037207-70037226 | MS.gene002540:CDS | 55.0% | |
GAAAGGTTCCCGCACTCCTT+GGG | + | chr2.1:70037312-70037331 | MS.gene002540:CDS | 55.0% | |
GAGGGCAAGAGCAAGAGTAG+TGG | + | chr2.1:70037280-70037299 | MS.gene002540:CDS | 55.0% | |
GCTCTTCGCCGTTTCTCTAC+TGG | + | chr2.1:70036499-70036518 | MS.gene002540:CDS | 55.0% | |
GGCAAGAGCAAGAGTAGTGG+TGG | + | chr2.1:70037283-70037302 | MS.gene002540:CDS | 55.0% | |
TGGGGTAAGCCAACTAAGGG+TGG | + | chr2.1:70037331-70037350 | MS.gene002540:CDS | 55.0% | |
TTGGCTTACCCCAAGGAGTG+CGG | - | chr2.1:70037324-70037343 | None:intergenic | 55.0% | |
! | AGAGCAAGAGTAGTGGTGGG+TGG | + | chr2.1:70037287-70037306 | MS.gene002540:CDS | 55.0% |
! | CATCCTCATGGTGGAGGAGA+GGG | + | chr2.1:70037262-70037281 | MS.gene002540:CDS | 55.0% |
! | CCCTTAGTTGGCTTACCCCA+AGG | - | chr2.1:70037331-70037350 | None:intergenic | 55.0% |
! | TCATCCTCATGGTGGAGGAG+AGG | + | chr2.1:70037261-70037280 | MS.gene002540:CDS | 55.0% |
!! | AGCAAGAGTAGTGGTGGGTG+GGG | + | chr2.1:70037289-70037308 | MS.gene002540:CDS | 55.0% |
!! | GAGCAAGAGTAGTGGTGGGT+GGG | + | chr2.1:70037288-70037307 | MS.gene002540:CDS | 55.0% |
ACTCGATGCAGGGCCACTGT+CGG | + | chr2.1:70037130-70037149 | MS.gene002540:CDS | 60.0% | |
GGAAAGGTTCCCGCACTCCT+TGG | + | chr2.1:70037311-70037330 | MS.gene002540:CDS | 60.0% | |
TTGCCCTCTCCTCCACCATG+AGG | - | chr2.1:70037268-70037287 | None:intergenic | 60.0% | |
! | GGAAAGCTTGTTCGGGCAGC+TGG | + | chr2.1:70037025-70037044 | MS.gene002540:CDS | 60.0% |
! | TGGCTTACCCCAAGGAGTGC+GGG | - | chr2.1:70037323-70037342 | None:intergenic | 60.0% |
!! | AGTAGTGGTGGGTGGGGGAA+AGG | + | chr2.1:70037295-70037314 | MS.gene002540:CDS | 60.0% |
!! | GCAAGAGTAGTGGTGGGTGG+GGG | + | chr2.1:70037290-70037309 | MS.gene002540:CDS | 60.0% |
ATCCTCTCGCGTGCCTCCTG+AGG | - | chr2.1:70036902-70036921 | None:intergenic | 65.0% | |
GAGACCGGTTGTTCGGGGTG+TGG | + | chr2.1:70037222-70037241 | MS.gene002540:CDS | 65.0% | |
GAGCTGAACCCAGGGCAAGG+TGG | + | chr2.1:70037004-70037023 | MS.gene002540:CDS | 65.0% | |
! | TTCCTCAGGAGGCACGCGAG+AGG | + | chr2.1:70036897-70036916 | MS.gene002540:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 70036439 | 70037387 | 70036439 | ID=MS.gene002540 |
chr2.1 | mRNA | 70036439 | 70037387 | 70036439 | ID=MS.gene002540.t1;Parent=MS.gene002540 |
chr2.1 | exon | 70036439 | 70036520 | 70036439 | ID=MS.gene002540.t1.exon1;Parent=MS.gene002540.t1 |
chr2.1 | CDS | 70036439 | 70036520 | 70036439 | ID=cds.MS.gene002540.t1;Parent=MS.gene002540.t1 |
chr2.1 | exon | 70036879 | 70037387 | 70036879 | ID=MS.gene002540.t1.exon2;Parent=MS.gene002540.t1 |
chr2.1 | CDS | 70036879 | 70037387 | 70036879 | ID=cds.MS.gene002540.t1;Parent=MS.gene002540.t1 |
Gene Sequence |
Protein sequence |