Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95934.t1 | KEH33239.1 | 88.2 | 153 | 13 | 2 | 1 | 153 | 8 | 155 | 1.30E-67 | 265.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95934.t1 | Q9FKI4 | 45.8 | 155 | 71 | 5 | 6 | 149 | 2 | 154 | 1.1e-22 | 107.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95934.t1 | A0A072UTR7 | 88.2 | 153 | 13 | 2 | 1 | 153 | 8 | 155 | 9.1e-68 | 265.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene95934.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95934 | MS.gene025927 | PPI |
| MS.gene95934 | MS.gene020996 | PPI |
| MS.gene95934 | MS.gene038837 | PPI |
| MS.gene95934 | MS.gene004214 | PPI |
| MS.gene95934 | MS.gene001986 | PPI |
| MS.gene95934 | MS.gene38111 | PPI |
| MS.gene95934 | MS.gene047400 | PPI |
| MS.gene95934 | MS.gene41916 | PPI |
| MS.gene95934 | MS.gene77827 | PPI |
| MS.gene95934 | MS.gene024463 | PPI |
| MS.gene95934 | MS.gene067362 | PPI |
| MS.gene95934 | MS.gene037362 | PPI |
| MS.gene059422 | MS.gene95934 | PPI |
| MS.gene036800 | MS.gene95934 | PPI |
| MS.gene59047 | MS.gene95934 | PPI |
| MS.gene95934 | MS.gene62426 | PPI |
| MS.gene95934 | MS.gene037324 | PPI |
| MS.gene95934 | MS.gene050629 | PPI |
| MS.gene95934 | MS.gene61498 | PPI |
| MS.gene95934 | MS.gene054186 | PPI |
| MS.gene95934 | MS.gene045843 | PPI |
| MS.gene95934 | MS.gene056257 | PPI |
| MS.gene95934 | MS.gene65650 | PPI |
| MS.gene95934 | MS.gene01518 | PPI |
| MS.gene95934 | MS.gene22814 | PPI |
| MS.gene95934 | MS.gene029211 | PPI |
| MS.gene95934 | MS.gene002540 | PPI |
| MS.gene95934 | MS.gene93131 | PPI |
| MS.gene95934 | MS.gene99744 | PPI |
| MS.gene95934 | MS.gene029242 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95934.t1 | MTR_3g030055 | 88.235 | 153 | 13 | 2 | 1 | 153 | 8 | 155 | 2.94e-94 | 270 |
| MS.gene95934.t1 | MTR_3g030055 | 89.796 | 98 | 8 | 1 | 1 | 98 | 1 | 96 | 2.48e-59 | 180 |
| MS.gene95934.t1 | MTR_3g034200 | 48.408 | 157 | 68 | 5 | 6 | 151 | 2 | 156 | 1.93e-35 | 121 |
| MS.gene95934.t1 | MTR_3g050860 | 39.490 | 157 | 84 | 6 | 1 | 151 | 1 | 152 | 4.48e-19 | 82.4 |
| MS.gene95934.t1 | MTR_0439s0020 | 35.135 | 148 | 85 | 7 | 1 | 142 | 1 | 143 | 1.32e-13 | 64.3 |
| MS.gene95934.t1 | MTR_7g117040 | 28.070 | 114 | 78 | 3 | 35 | 146 | 39 | 150 | 6.32e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95934.t1 | AT5G13780 | 45.513 | 156 | 72 | 5 | 6 | 150 | 2 | 155 | 2.63e-31 | 111 |
| MS.gene95934.t1 | AT1G03150 | 28.947 | 114 | 77 | 3 | 35 | 146 | 39 | 150 | 3.64e-12 | 61.2 |
Find 40 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACAATGTGCCAATATT+CGG | 0.287513 | 3.2:+33977095 | None:intergenic |
| CTCGTTACTCGCCCGAATAT+TGG | 0.335099 | 3.2:-33977107 | MS.gene95934:CDS |
| TGCATAAGAGTTGCAACATT+TGG | 0.337938 | 3.2:-33977161 | MS.gene95934:CDS |
| GAGCTGCAGAGTTGCTCTTC+CGG | 0.345662 | 3.2:+33976220 | None:intergenic |
| TCCACAATGTGCCAATATTC+GGG | 0.349965 | 3.2:+33977096 | None:intergenic |
| TCTTGGTTTGTTTGAAAAGA+TGG | 0.363394 | 3.2:-33976199 | MS.gene95934:CDS |
| TGCAACATTTGGAGACGTAT+TGG | 0.394327 | 3.2:-33977150 | MS.gene95934:CDS |
| GATAGGTATGGTGAACGAAT+AGG | 0.421395 | 3.2:+33976967 | None:intergenic |
| CTCCTCATCATCAAAATACT+TGG | 0.430558 | 3.2:+33976152 | None:intergenic |
| ATAGGTATGGTGAACGAATA+GGG | 0.433258 | 3.2:+33976968 | None:intergenic |
| CTCTGAAGGTGAAGAGGAAG+AGG | 0.447607 | 3.2:-33977018 | MS.gene95934:CDS |
| CGCCCAAAACACCATGGAAA+AGG | 0.453353 | 3.2:-33976910 | MS.gene95934:intron |
| CTTGGTTTGTTTGAAAAGAT+GGG | 0.459057 | 3.2:-33976198 | MS.gene95934:CDS |
| AAGAGCAACTCTGCAGCTCT+TGG | 0.462439 | 3.2:-33976216 | MS.gene95934:CDS |
| AAGACGTCTCAGTGCACGTC+CGG | 0.493597 | 3.2:-33976239 | MS.gene95934:CDS |
| CATTTGGAGACGTATTGGAT+TGG | 0.499964 | 3.2:-33977145 | MS.gene95934:CDS |
| AGGAACAATGTCTTCAAAGA+AGG | 0.508100 | 3.2:-33977186 | None:intergenic |
| GTTGCTTACCTCCTCTCTGA+AGG | 0.508220 | 3.2:-33977032 | MS.gene95934:CDS |
| AAGGTGAAGAGGAAGAGGAA+GGG | 0.530803 | 3.2:-33977013 | MS.gene95934:CDS |
| GTCTTGAGGAAGATACTCAA+GGG | 0.554037 | 3.2:-33976120 | MS.gene95934:CDS |
| GAAGGTGAAGAGGAAGAGGA+AGG | 0.556577 | 3.2:-33977014 | MS.gene95934:CDS |
| TGTCTTGAGGAAGATACTCA+AGG | 0.562517 | 3.2:-33976121 | MS.gene95934:CDS |
| CCTCCTCTCTGAAGGTGAAG+AGG | 0.564442 | 3.2:-33977024 | MS.gene95934:CDS |
| GCCCGAATATTGGCACATTG+TGG | 0.568169 | 3.2:-33977097 | MS.gene95934:CDS |
| GAAGAGGAAGAGGAAGGGAA+TGG | 0.582705 | 3.2:-33977008 | MS.gene95934:CDS |
| TTACACACTTCACGAGGTGA+AGG | 0.607853 | 3.2:-33976175 | MS.gene95934:CDS |
| ATAGGGAGGCGATACTAAAG+TGG | 0.612204 | 3.2:+33976985 | None:intergenic |
| CCTCTTCACCTTCAGAGAGG+AGG | 0.614706 | 3.2:+33977024 | None:intergenic |
| AGGAGGACGCTATTGTCTTG+AGG | 0.615172 | 3.2:-33976134 | MS.gene95934:CDS |
| CACCGCCGCCCAAAACACCA+TGG | 0.620119 | 3.2:-33976916 | MS.gene95934:CDS |
| CACCATACCTATCGTAAACG+TGG | 0.631082 | 3.2:-33976957 | MS.gene95934:CDS |
| GAGTGGGTCTCACAGTTAGG+TGG | 0.634645 | 3.2:+33976086 | None:intergenic |
| CTTCCTCTTCACCTTCAGAG+AGG | 0.638002 | 3.2:+33977021 | None:intergenic |
| GAAGAAGCTTATTCATGTCG+CGG | 0.645766 | 3.2:-33977075 | MS.gene95934:CDS |
| TACCACGTTTACGATAGGTA+TGG | 0.651983 | 3.2:+33976955 | None:intergenic |
| AGCGATACCACGTTTACGAT+AGG | 0.681782 | 3.2:+33976950 | None:intergenic |
| TCTTGAGGAAGATACTCAAG+GGG | 0.688967 | 3.2:-33976119 | MS.gene95934:CDS |
| CATGTCGCGGACAATTGCAG+CGG | 0.697708 | 3.2:-33977062 | MS.gene95934:CDS |
| GATGGGTTACACACTTCACG+AGG | 0.713948 | 3.2:-33976181 | MS.gene95934:CDS |
| GGTATGGTGAACGAATAGGG+AGG | 0.789435 | 3.2:+33976971 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTGTTTTTTGGATT+AGG | - | chr3.2:33976419-33976438 | MS.gene95934:intron | 15.0% |
| !!! | TCTGTTATAATTTTGTTTTT+TGG | - | chr3.2:33976413-33976432 | MS.gene95934:intron | 15.0% |
| ! | ACAACCAAAAACATCAAAAA+AGG | + | chr3.2:33976958-33976977 | None:intergenic | 25.0% |
| ! | GAAAACCAAAAGAAAAATCT+CGG | + | chr3.2:33976863-33976882 | None:intergenic | 25.0% |
| !! | ACATTGTAACAGACTTTTAA+TGG | + | chr3.2:33976996-33977015 | None:intergenic | 25.0% |
| !! | ATGGAGTTTGTTTAATGTTT+AGG | - | chr3.2:33976499-33976518 | MS.gene95934:intron | 25.0% |
| !!! | TTTTCTTGTTTCCTAATCTT+GGG | - | chr3.2:33976878-33976897 | MS.gene95934:intron | 25.0% |
| ACAATGTGTAATTTGACTGA+AGG | - | chr3.2:33977009-33977028 | MS.gene95934:CDS | 30.0% | |
| AGAAAACAGAAAATCATCAC+GGG | + | chr3.2:33976622-33976641 | None:intergenic | 30.0% | |
| CAGAAAACAGAAAATCATCA+CGG | + | chr3.2:33976623-33976642 | None:intergenic | 30.0% | |
| TAATGTTTAGGTATGAAGCT+TGG | - | chr3.2:33976511-33976530 | MS.gene95934:intron | 30.0% | |
| TCCATACATAACCAGTTAAA+AGG | + | chr3.2:33976484-33976503 | None:intergenic | 30.0% | |
| ! | TTTCTTCTTGTTAGTGCTTT+TGG | - | chr3.2:33976779-33976798 | MS.gene95934:intron | 30.0% |
| ! | TTTCTTGTTTCCTAATCTTG+GGG | - | chr3.2:33976879-33976898 | MS.gene95934:intron | 30.0% |
| !! | CTTGGTTTGTTTGAAAAGAT+GGG | - | chr3.2:33977082-33977101 | MS.gene95934:CDS | 30.0% |
| !! | GTTTTCTTGTTTCCTAATCT+TGG | - | chr3.2:33976877-33976896 | MS.gene95934:intron | 30.0% |
| !! | TCTTGGTTTGTTTGAAAAGA+TGG | - | chr3.2:33977081-33977100 | MS.gene95934:CDS | 30.0% |
| !!! | CAGACCTTTTTTGATGTTTT+TGG | - | chr3.2:33976951-33976970 | MS.gene95934:CDS | 30.0% |
| AAAACACCATGGAAAAGGTT+AGG | - | chr3.2:33976375-33976394 | MS.gene95934:intron | 35.0% | |
| AACCAAAAGAAAAATCTCGG+AGG | + | chr3.2:33976860-33976879 | None:intergenic | 35.0% | |
| AATCTGAGTTTCACTATGCT+AGG | - | chr3.2:33976647-33976666 | MS.gene95934:intron | 35.0% | |
| ATAGGTATGGTGAACGAATA+GGG | + | chr3.2:33976315-33976334 | None:intergenic | 35.0% | |
| ATGTGTAATTTGACTGAAGG+TGG | - | chr3.2:33977012-33977031 | MS.gene95934:CDS | 35.0% | |
| CTAGGATTATCTTCTATTCC+GGG | - | chr3.2:33976665-33976684 | MS.gene95934:intron | 35.0% | |
| CTCCTCATCATCAAAATACT+TGG | + | chr3.2:33977131-33977150 | None:intergenic | 35.0% | |
| GCTAGGATTATCTTCTATTC+CGG | - | chr3.2:33976664-33976683 | MS.gene95934:intron | 35.0% | |
| TGCATAAGAGTTGCAACATT+TGG | - | chr3.2:33976119-33976138 | MS.gene95934:CDS | 35.0% | |
| TGTGTAATTTGACTGAAGGT+GGG | - | chr3.2:33977013-33977032 | MS.gene95934:CDS | 35.0% | |
| TTCCACAATGTGCCAATATT+CGG | + | chr3.2:33976188-33976207 | None:intergenic | 35.0% | |
| ! | AACAAACCTAACCTTTTCCA+TGG | + | chr3.2:33976384-33976403 | None:intergenic | 35.0% |
| ! | AACCTTTTCCATGGTGTTTT+GGG | + | chr3.2:33976375-33976394 | None:intergenic | 35.0% |
| ! | CGTGATGATTTTCTGTTTTC+TGG | - | chr3.2:33976621-33976640 | MS.gene95934:intron | 35.0% |
| ! | TAACCTTTTCCATGGTGTTT+TGG | + | chr3.2:33976376-33976395 | None:intergenic | 35.0% |
| ! | TTGGTTGAGTTGTTTCGTTA+GGG | - | chr3.2:33976530-33976549 | MS.gene95934:intron | 35.0% |
| ! | TTTTCAGATAGATCACACAG+TGG | + | chr3.2:33976599-33976618 | None:intergenic | 35.0% |
| !! | GCCTTTTAACTGGTTATGTA+TGG | - | chr3.2:33976480-33976499 | MS.gene95934:intron | 35.0% |
| !! | TCTGTAGTTAGTCTTGTCTA+GGG | - | chr3.2:33976823-33976842 | MS.gene95934:intron | 35.0% |
| !! | TTCTGTAGTTAGTCTTGTCT+AGG | - | chr3.2:33976822-33976841 | MS.gene95934:intron | 35.0% |
| !!! | CAAGTATTTTGATGATGAGG+AGG | - | chr3.2:33977129-33977148 | MS.gene95934:CDS | 35.0% |
| AAACACTTCCCACAGAGAAT+TGG | + | chr3.2:33976751-33976770 | None:intergenic | 40.0% | |
| AAAGGGAGTGGCAATGATTA+GGG | + | chr3.2:33976711-33976730 | None:intergenic | 40.0% | |
| AGGCAAAACCAATTCTCTGT+GGG | - | chr3.2:33976740-33976759 | MS.gene95934:intron | 40.0% | |
| CATTTGGAGACGTATTGGAT+TGG | - | chr3.2:33976135-33976154 | MS.gene95934:CDS | 40.0% | |
| GAAGAAGCTTATTCATGTCG+CGG | - | chr3.2:33976205-33976224 | MS.gene95934:CDS | 40.0% | |
| GATAGGTATGGTGAACGAAT+AGG | + | chr3.2:33976316-33976335 | None:intergenic | 40.0% | |
| GTCTTGAGGAAGATACTCAA+GGG | - | chr3.2:33977160-33977179 | MS.gene95934:CDS | 40.0% | |
| TAAAGGGAGTGGCAATGATT+AGG | + | chr3.2:33976712-33976731 | None:intergenic | 40.0% | |
| TACCACGTTTACGATAGGTA+TGG | + | chr3.2:33976328-33976347 | None:intergenic | 40.0% | |
| TCCACAATGTGCCAATATTC+GGG | + | chr3.2:33976187-33976206 | None:intergenic | 40.0% | |
| TCTTGAGGAAGATACTCAAG+GGG | - | chr3.2:33977161-33977180 | MS.gene95934:CDS | 40.0% | |
| TGCAACATTTGGAGACGTAT+TGG | - | chr3.2:33976130-33976149 | MS.gene95934:CDS | 40.0% | |
| TGTCTTGAGGAAGATACTCA+AGG | - | chr3.2:33977159-33977178 | MS.gene95934:CDS | 40.0% | |
| TTATCTTCTATTCCGGGAAG+TGG | - | chr3.2:33976671-33976690 | MS.gene95934:intron | 40.0% | |
| ! | CTTCTTGTTAGTGCTTTTGG+TGG | - | chr3.2:33976782-33976801 | MS.gene95934:intron | 40.0% |
| ! | CTTGGTTGAGTTGTTTCGTT+AGG | - | chr3.2:33976529-33976548 | MS.gene95934:intron | 40.0% |
| ! | GGATTAGGTTTGTCACTTGT+GGG | - | chr3.2:33976434-33976453 | MS.gene95934:intron | 40.0% |
| ! | GTCCTCCGAGATTTTTCTTT+TGG | - | chr3.2:33976855-33976874 | MS.gene95934:intron | 40.0% |
| ! | TGGATTAGGTTTGTCACTTG+TGG | - | chr3.2:33976433-33976452 | MS.gene95934:intron | 40.0% |
| ! | TGGTTGAGTTGTTTCGTTAG+GGG | - | chr3.2:33976531-33976550 | MS.gene95934:intron | 40.0% |
| ! | TGTGGTATAGGCCTTTTAAC+TGG | - | chr3.2:33976470-33976489 | MS.gene95934:intron | 40.0% |
| ! | TTTTGCCTCCCACTCATAAA+GGG | + | chr3.2:33976728-33976747 | None:intergenic | 40.0% |
| !! | TTGTTAGTGCTTTTGGTGGT+AGG | - | chr3.2:33976786-33976805 | MS.gene95934:intron | 40.0% |
| !!! | GGCCAAGTATTTTGATGATG+AGG | - | chr3.2:33977126-33977145 | MS.gene95934:CDS | 40.0% |
| !!! | TTCTCTGTGGGAAGTGTTTT+TGG | - | chr3.2:33976752-33976771 | MS.gene95934:intron | 40.0% |
| AAAATCCGCACCCCAAGATT+AGG | + | chr3.2:33976892-33976911 | None:intergenic | 45.0% | |
| AAGGTGAAGAGGAAGAGGAA+GGG | - | chr3.2:33976267-33976286 | MS.gene95934:intron | 45.0% | |
| AGCGATACCACGTTTACGAT+AGG | + | chr3.2:33976333-33976352 | None:intergenic | 45.0% | |
| ATAGGGAGGCGATACTAAAG+TGG | + | chr3.2:33976298-33976317 | None:intergenic | 45.0% | |
| ATTGCCACTCCCTTTATGAG+TGG | - | chr3.2:33976716-33976735 | MS.gene95934:intron | 45.0% | |
| CACCATACCTATCGTAAACG+TGG | - | chr3.2:33976323-33976342 | MS.gene95934:intron | 45.0% | |
| GAGGCAAAACCAATTCTCTG+TGG | - | chr3.2:33976739-33976758 | MS.gene95934:intron | 45.0% | |
| TAGCGTATAGGGTGTGGTAT+AGG | - | chr3.2:33976458-33976477 | MS.gene95934:intron | 45.0% | |
| TATTCCGGGAAGTGGTTCTT+CGG | - | chr3.2:33976679-33976698 | MS.gene95934:intron | 45.0% | |
| TGTTTCCTAATCTTGGGGTG+CGG | - | chr3.2:33976884-33976903 | MS.gene95934:intron | 45.0% | |
| TTACACACTTCACGAGGTGA+AGG | - | chr3.2:33977105-33977124 | MS.gene95934:CDS | 45.0% | |
| TTGCCACTCCCTTTATGAGT+GGG | - | chr3.2:33976717-33976736 | MS.gene95934:intron | 45.0% | |
| ! | GTTTTGCCTCCCACTCATAA+AGG | + | chr3.2:33976729-33976748 | None:intergenic | 45.0% |
| ! | TGAGTTGTTTCGTTAGGGGT+GGG | - | chr3.2:33976535-33976554 | MS.gene95934:intron | 45.0% |
| ! | TTGAGTTGTTTCGTTAGGGG+TGG | - | chr3.2:33976534-33976553 | MS.gene95934:intron | 45.0% |
| !! | CACTTGTGGGTTAGCGTATA+GGG | - | chr3.2:33976447-33976466 | MS.gene95934:intron | 45.0% |
| !! | CTTTTCCATGGTGTTTTGGG+CGG | + | chr3.2:33976372-33976391 | None:intergenic | 45.0% |
| !! | TCACTTGTGGGTTAGCGTAT+AGG | - | chr3.2:33976446-33976465 | MS.gene95934:intron | 45.0% |
| AAGAGCAACTCTGCAGCTCT+TGG | - | chr3.2:33977064-33977083 | MS.gene95934:CDS | 50.0% | |
| AGGAGGACGCTATTGTCTTG+AGG | - | chr3.2:33977146-33977165 | MS.gene95934:CDS | 50.0% | |
| CGCCCAAAACACCATGGAAA+AGG | - | chr3.2:33976370-33976389 | MS.gene95934:intron | 50.0% | |
| CTCGTTACTCGCCCGAATAT+TGG | - | chr3.2:33976173-33976192 | MS.gene95934:CDS | 50.0% | |
| CTTCCTCTTCACCTTCAGAG+AGG | + | chr3.2:33976262-33976281 | None:intergenic | 50.0% | |
| GAAGAGGAAGAGGAAGGGAA+TGG | - | chr3.2:33976272-33976291 | MS.gene95934:intron | 50.0% | |
| GAAGGTGAAGAGGAAGAGGA+AGG | - | chr3.2:33976266-33976285 | MS.gene95934:intron | 50.0% | |
| GCCCGAATATTGGCACATTG+TGG | - | chr3.2:33976183-33976202 | MS.gene95934:CDS | 50.0% | |
| GGTATGGTGAACGAATAGGG+AGG | + | chr3.2:33976312-33976331 | None:intergenic | 50.0% | |
| GTTGCTTACCTCCTCTCTGA+AGG | - | chr3.2:33976248-33976267 | MS.gene95934:CDS | 50.0% | |
| TTCACCGAAGAACCACTTCC+CGG | + | chr3.2:33976686-33976705 | None:intergenic | 50.0% | |
| ! | CTCTGAAGGTGAAGAGGAAG+AGG | - | chr3.2:33976262-33976281 | MS.gene95934:intron | 50.0% |
| ! | TTGGGGTGCGGATTTTCTCT+AGG | - | chr3.2:33976896-33976915 | MS.gene95934:intron | 50.0% |
| !! | GATGGGTTACACACTTCACG+AGG | - | chr3.2:33977099-33977118 | MS.gene95934:CDS | 50.0% |
| !! | GTCTTGTCTAGGGAGTGTTC+TGG | - | chr3.2:33976833-33976852 | MS.gene95934:intron | 50.0% |
| AAGACGTCTCAGTGCACGTC+CGG | - | chr3.2:33977041-33977060 | MS.gene95934:CDS | 55.0% | |
| AAGGTCTGTACAGCAGCTGC+AGG | + | chr3.2:33976939-33976958 | None:intergenic | 55.0% | |
| CATGTCGCGGACAATTGCAG+CGG | - | chr3.2:33976218-33976237 | MS.gene95934:CDS | 55.0% | |
| CCACTCCCTTTATGAGTGGG+AGG | - | chr3.2:33976720-33976739 | MS.gene95934:intron | 55.0% | |
| CCTCCCACTCATAAAGGGAG+TGG | + | chr3.2:33976723-33976742 | None:intergenic | 55.0% | |
| CCTCTTCACCTTCAGAGAGG+AGG | + | chr3.2:33976259-33976278 | None:intergenic | 55.0% | |
| CTGCAGGTCTCAAGGTAGAG+AGG | + | chr3.2:33976923-33976942 | None:intergenic | 55.0% | |
| GAGCTGCAGAGTTGCTCTTC+CGG | + | chr3.2:33977063-33977082 | None:intergenic | 55.0% | |
| GTGGGAAAGCAGAGTAGGCT+AGG | - | chr3.2:33976553-33976572 | MS.gene95934:intron | 55.0% | |
| TACAGCAGCTGCAGGTCTCA+AGG | + | chr3.2:33976931-33976950 | None:intergenic | 55.0% | |
| TAGGGGTGGGAAAGCAGAGT+AGG | - | chr3.2:33976548-33976567 | MS.gene95934:intron | 55.0% | |
| ! | CCTCCTCTCTGAAGGTGAAG+AGG | - | chr3.2:33976256-33976275 | MS.gene95934:intron | 55.0% |
| !! | GTGGGTTAGCGTATAGGGTG+TGG | - | chr3.2:33976452-33976471 | MS.gene95934:intron | 55.0% |
| !! | TTCCATGGTGTTTTGGGCGG+CGG | + | chr3.2:33976369-33976388 | None:intergenic | 55.0% |
| CACCGCCGCCCAAAACACCA+TGG | - | chr3.2:33976364-33976383 | MS.gene95934:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 33976101 | 33977201 | 33976101 | ID=MS.gene95934 |
| chr3.2 | mRNA | 33976101 | 33977201 | 33976101 | ID=MS.gene95934.t1;Parent=MS.gene95934 |
| chr3.2 | exon | 33976911 | 33977201 | 33976911 | ID=MS.gene95934.t1.exon1;Parent=MS.gene95934.t1 |
| chr3.2 | CDS | 33976911 | 33977201 | 33976911 | ID=cds.MS.gene95934.t1;Parent=MS.gene95934.t1 |
| chr3.2 | exon | 33976101 | 33976271 | 33976101 | ID=MS.gene95934.t1.exon2;Parent=MS.gene95934.t1 |
| chr3.2 | CDS | 33976101 | 33976271 | 33976101 | ID=cds.MS.gene95934.t1;Parent=MS.gene95934.t1 |
| Gene Sequence |
| Protein sequence |
