Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96335.t1 | XP_003610076.1 | 99.1 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 3.30E-182 | 647.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96335.t1 | Q96518 | 74.0 | 319 | 82 | 1 | 5 | 323 | 6 | 323 | 8.2e-134 | 478.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96335.t1 | G7JUC8 | 99.1 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 2.3e-182 | 647.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene96335 | -0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene04932 | MS.gene96335 | 0.85101 | 1.17E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene96335 | -0.807106 | 5.94E-50 | -1.69E-46 |
| MS.gene050326 | MS.gene96335 | 0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene050338 | MS.gene96335 | 0.833027 | 6.75E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene96335 | -0.824717 | 6.94E-54 | -1.69E-46 |
| MS.gene050710 | MS.gene96335 | 0.88316 | 5.67E-71 | -1.69E-46 |
| MS.gene050809 | MS.gene96335 | 0.861566 | 9.38E-64 | -1.69E-46 |
| MS.gene05080 | MS.gene96335 | -0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene96335 | -0.80531 | 1.42E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene96335 | 0.803232 | 3.85E-49 | -1.69E-46 |
| MS.gene051439 | MS.gene96335 | 0.840917 | 6.52E-58 | -1.69E-46 |
| MS.gene051517 | MS.gene96335 | 0.811839 | 5.73E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene96335 | 0.824344 | 8.49E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene96335 | -0.847856 | 8.87E-60 | -1.69E-46 |
| MS.gene051863 | MS.gene96335 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene052129 | MS.gene96335 | 0.812166 | 4.86E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene96335 | 0.814687 | 1.36E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene96335 | -0.816331 | 5.84E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene96335 | 0.812481 | 4.15E-51 | -1.69E-46 |
| MS.gene052702 | MS.gene96335 | 0.81946 | 1.15E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene96335 | -0.812087 | 5.06E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene96335 | -0.816249 | 6.10E-52 | -1.69E-46 |
| MS.gene053108 | MS.gene96335 | 0.804119 | 2.52E-49 | -1.69E-46 |
| MS.gene053638 | MS.gene96335 | 0.804552 | 2.05E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene96335 | -0.802096 | 6.60E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene96335 | -0.807546 | 4.80E-50 | -1.69E-46 |
| MS.gene053920 | MS.gene96335 | 0.805702 | 1.17E-49 | -1.69E-46 |
| MS.gene054290 | MS.gene96335 | 0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene96335 | -0.814664 | 1.37E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene96335 | 0.841043 | 6.04E-58 | -1.69E-46 |
| MS.gene054742 | MS.gene96335 | 0.832685 | 8.21E-56 | -1.69E-46 |
| MS.gene054884 | MS.gene96335 | 0.834885 | 2.31E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene96335 | 0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene96335 | -0.818309 | 2.10E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene96335 | -0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene96335 | -0.816672 | 4.90E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene96335 | -0.813556 | 2.41E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene96335 | -0.811479 | 6.86E-51 | -1.69E-46 |
| MS.gene056330 | MS.gene96335 | 0.821822 | 3.29E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene96335 | -0.827352 | 1.64E-54 | -1.69E-46 |
| MS.gene05652 | MS.gene96335 | 0.813911 | 2.01E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene96335 | 0.823746 | 1.17E-53 | -1.69E-46 |
| MS.gene056591 | MS.gene96335 | 0.821593 | 3.72E-53 | -1.69E-46 |
| MS.gene056678 | MS.gene96335 | 0.812583 | 3.94E-51 | -1.69E-46 |
| MS.gene056688 | MS.gene96335 | 0.837902 | 3.95E-57 | -1.69E-46 |
| MS.gene056694 | MS.gene96335 | 0.815343 | 9.71E-52 | -1.69E-46 |
| MS.gene056697 | MS.gene96335 | 0.857952 | 1.15E-62 | -1.69E-46 |
| MS.gene056856 | MS.gene96335 | 0.829895 | 3.99E-55 | -1.69E-46 |
| MS.gene057261 | MS.gene96335 | 0.819112 | 1.38E-52 | -1.69E-46 |
| MS.gene057544 | MS.gene96335 | 0.814251 | 1.69E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene96335 | -0.809301 | 2.02E-50 | -1.69E-46 |
| MS.gene057669 | MS.gene96335 | 0.815403 | 9.41E-52 | -1.69E-46 |
| MS.gene057717 | MS.gene96335 | 0.858564 | 7.56E-63 | -1.69E-46 |
| MS.gene058067 | MS.gene96335 | 0.820689 | 6.01E-53 | -1.69E-46 |
| MS.gene058158 | MS.gene96335 | 0.813833 | 2.09E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene96335 | 0.813426 | 2.58E-51 | -1.69E-46 |
| MS.gene058382 | MS.gene96335 | 0.853491 | 2.31E-61 | -1.69E-46 |
| MS.gene058416 | MS.gene96335 | 0.814748 | 1.32E-51 | -1.69E-46 |
| MS.gene058418 | MS.gene96335 | 0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene058452 | MS.gene96335 | 0.809807 | 1.58E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene96335 | -0.814547 | 1.46E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene96335 | 0.819177 | 1.33E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene96335 | -0.830334 | 3.11E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene96335 | -0.80461 | 1.99E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene96335 | 0.900777 | 5.22E-78 | -1.69E-46 |
| MS.gene05960 | MS.gene96335 | 0.830574 | 2.72E-55 | -1.69E-46 |
| MS.gene059699 | MS.gene96335 | 0.813832 | 2.10E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene96335 | 0.813945 | 1.98E-51 | -1.69E-46 |
| MS.gene060087 | MS.gene96335 | 0.825376 | 4.85E-54 | -1.69E-46 |
| MS.gene060405 | MS.gene96335 | 0.884647 | 1.60E-71 | -1.69E-46 |
| MS.gene061044 | MS.gene96335 | 0.825382 | 4.83E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene96335 | MS.gene98878 | PPI |
| MS.gene049488 | MS.gene96335 | PPI |
| MS.gene96335 | MS.gene41565 | PPI |
| MS.gene38511 | MS.gene96335 | PPI |
| MS.gene96335 | MS.gene017208 | PPI |
| MS.gene96335 | MS.gene008562 | PPI |
| MS.gene062216 | MS.gene96335 | PPI |
| MS.gene26287 | MS.gene96335 | PPI |
| MS.gene96335 | MS.gene004925 | PPI |
| MS.gene96335 | MS.gene009691 | PPI |
| MS.gene009689 | MS.gene96335 | PPI |
| MS.gene26286 | MS.gene96335 | PPI |
| MS.gene49484 | MS.gene96335 | PPI |
| MS.gene017207 | MS.gene96335 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96335.t1 | MTR_4g127670 | 99.071 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 0.0 | 659 |
| MS.gene96335.t1 | MTR_5g016010 | 65.031 | 326 | 108 | 3 | 1 | 320 | 1 | 326 | 1.06e-156 | 441 |
| MS.gene96335.t1 | MTR_4g095450 | 67.619 | 315 | 94 | 2 | 9 | 320 | 12 | 321 | 6.93e-155 | 437 |
| MS.gene96335.t1 | MTR_1g009750 | 63.240 | 321 | 116 | 1 | 5 | 323 | 8 | 328 | 1.07e-147 | 419 |
| MS.gene96335.t1 | MTR_1g009750 | 58.567 | 321 | 114 | 2 | 5 | 323 | 8 | 311 | 3.97e-132 | 379 |
| MS.gene96335.t1 | MTR_7g029030 | 55.521 | 326 | 136 | 4 | 1 | 323 | 1 | 320 | 5.28e-125 | 361 |
| MS.gene96335.t1 | MTR_1g090760 | 42.547 | 322 | 178 | 3 | 7 | 323 | 11 | 330 | 1.30e-87 | 266 |
| MS.gene96335.t1 | MTR_4g087965 | 44.375 | 320 | 167 | 5 | 10 | 320 | 26 | 343 | 3.12e-85 | 260 |
| MS.gene96335.t1 | MTR_8g062780 | 42.415 | 323 | 179 | 4 | 1 | 319 | 1 | 320 | 5.67e-83 | 254 |
| MS.gene96335.t1 | MTR_3g092990 | 42.500 | 320 | 175 | 5 | 5 | 319 | 7 | 322 | 2.89e-82 | 252 |
| MS.gene96335.t1 | MTR_5g022870 | 43.614 | 321 | 167 | 8 | 7 | 323 | 6 | 316 | 1.23e-81 | 250 |
| MS.gene96335.t1 | MTR_0286s0010 | 42.368 | 321 | 176 | 6 | 8 | 323 | 18 | 334 | 3.16e-79 | 244 |
| MS.gene96335.t1 | MTR_6g008075 | 42.368 | 321 | 176 | 6 | 8 | 323 | 18 | 334 | 3.16e-79 | 244 |
| MS.gene96335.t1 | MTR_2g029815 | 44.582 | 323 | 169 | 5 | 3 | 319 | 8 | 326 | 3.20e-79 | 245 |
| MS.gene96335.t1 | MTR_1g025980 | 41.139 | 316 | 175 | 5 | 7 | 319 | 7 | 314 | 8.75e-79 | 243 |
| MS.gene96335.t1 | MTR_7g093370 | 41.994 | 331 | 180 | 5 | 1 | 323 | 45 | 371 | 4.83e-78 | 243 |
| MS.gene96335.t1 | MTR_2g088770 | 41.250 | 320 | 180 | 5 | 8 | 323 | 10 | 325 | 1.29e-77 | 240 |
| MS.gene96335.t1 | MTR_2g029820 | 45.277 | 307 | 158 | 5 | 19 | 319 | 24 | 326 | 2.50e-77 | 240 |
| MS.gene96335.t1 | MTR_1g054205 | 41.104 | 326 | 178 | 4 | 5 | 323 | 8 | 326 | 1.07e-75 | 235 |
| MS.gene96335.t1 | MTR_4g114210 | 41.975 | 324 | 177 | 5 | 6 | 323 | 2 | 320 | 1.78e-75 | 234 |
| MS.gene96335.t1 | MTR_2g029800 | 43.648 | 307 | 163 | 5 | 19 | 319 | 24 | 326 | 2.92e-75 | 235 |
| MS.gene96335.t1 | MTR_2g029830 | 43.974 | 307 | 162 | 5 | 19 | 319 | 23 | 325 | 9.43e-75 | 234 |
| MS.gene96335.t1 | MTR_2g029860 | 41.159 | 328 | 185 | 4 | 1 | 323 | 6 | 330 | 1.03e-74 | 234 |
| MS.gene96335.t1 | MTR_2g040000 | 41.562 | 320 | 178 | 4 | 6 | 319 | 11 | 327 | 2.06e-74 | 232 |
| MS.gene96335.t1 | MTR_8g075100 | 42.809 | 299 | 159 | 6 | 24 | 319 | 26 | 315 | 1.49e-73 | 229 |
| MS.gene96335.t1 | MTR_4g133800 | 42.282 | 298 | 163 | 5 | 27 | 323 | 44 | 333 | 8.59e-73 | 228 |
| MS.gene96335.t1 | MTR_2g029850 | 43.648 | 307 | 163 | 4 | 19 | 319 | 24 | 326 | 1.02e-72 | 229 |
| MS.gene96335.t1 | MTR_2g028980 | 44.118 | 306 | 161 | 6 | 20 | 319 | 25 | 326 | 2.84e-72 | 228 |
| MS.gene96335.t1 | MTR_1g101830 | 41.139 | 316 | 175 | 6 | 8 | 319 | 10 | 318 | 8.25e-72 | 225 |
| MS.gene96335.t1 | MTR_4g046713 | 39.557 | 316 | 187 | 3 | 6 | 319 | 9 | 322 | 1.54e-71 | 224 |
| MS.gene96335.t1 | MTR_7g107520 | 40.673 | 327 | 183 | 6 | 1 | 323 | 1 | 320 | 4.33e-71 | 223 |
| MS.gene96335.t1 | MTR_3g092990 | 40.312 | 320 | 171 | 6 | 5 | 319 | 7 | 311 | 4.83e-71 | 223 |
| MS.gene96335.t1 | MTR_2g029750 | 41.694 | 307 | 169 | 6 | 19 | 319 | 24 | 326 | 1.74e-70 | 223 |
| MS.gene96335.t1 | MTR_1g086320 | 40.785 | 331 | 178 | 10 | 5 | 323 | 9 | 333 | 2.30e-70 | 222 |
| MS.gene96335.t1 | MTR_2g008710 | 39.394 | 330 | 188 | 6 | 1 | 323 | 1 | 325 | 2.51e-70 | 221 |
| MS.gene96335.t1 | MTR_4g029170 | 39.938 | 323 | 181 | 6 | 5 | 323 | 8 | 321 | 2.86e-70 | 221 |
| MS.gene96335.t1 | MTR_5g021060 | 40.532 | 301 | 170 | 4 | 28 | 323 | 34 | 330 | 8.17e-70 | 220 |
| MS.gene96335.t1 | MTR_2g084080 | 39.748 | 317 | 177 | 5 | 6 | 319 | 8 | 313 | 1.36e-69 | 219 |
| MS.gene96335.t1 | MTR_2g084090 | 39.185 | 319 | 177 | 6 | 6 | 319 | 8 | 314 | 1.73e-69 | 219 |
| MS.gene96335.t1 | MTR_1g086490 | 40.828 | 338 | 175 | 10 | 5 | 323 | 9 | 340 | 1.88e-69 | 220 |
| MS.gene96335.t1 | MTR_5g017860 | 40.439 | 319 | 179 | 7 | 6 | 319 | 10 | 322 | 4.42e-69 | 218 |
| MS.gene96335.t1 | MTR_4g125940 | 40.752 | 319 | 179 | 5 | 6 | 319 | 12 | 325 | 5.97e-69 | 218 |
| MS.gene96335.t1 | MTR_7g086870 | 42.667 | 300 | 158 | 7 | 22 | 319 | 20 | 307 | 1.56e-68 | 216 |
| MS.gene96335.t1 | MTR_6g043460 | 40.184 | 326 | 178 | 6 | 5 | 323 | 13 | 328 | 1.75e-68 | 218 |
| MS.gene96335.t1 | MTR_6g043240 | 41.333 | 300 | 166 | 4 | 24 | 323 | 42 | 331 | 3.09e-68 | 217 |
| MS.gene96335.t1 | MTR_1g038680 | 40.789 | 304 | 164 | 8 | 27 | 320 | 32 | 329 | 5.29e-68 | 216 |
| MS.gene96335.t1 | MTR_5g083860 | 37.273 | 330 | 188 | 6 | 1 | 323 | 8 | 325 | 5.48e-68 | 216 |
| MS.gene96335.t1 | MTR_5g017850 | 39.498 | 319 | 182 | 7 | 6 | 319 | 10 | 322 | 5.70e-68 | 216 |
| MS.gene96335.t1 | MTR_5g074860 | 42.202 | 327 | 164 | 11 | 6 | 321 | 11 | 323 | 7.65e-68 | 215 |
| MS.gene96335.t1 | MTR_2g084110 | 39.432 | 317 | 178 | 5 | 6 | 319 | 8 | 313 | 4.09e-67 | 213 |
| MS.gene96335.t1 | MTR_7g072480 | 40.994 | 322 | 165 | 7 | 11 | 323 | 11 | 316 | 4.72e-67 | 213 |
| MS.gene96335.t1 | MTR_2g029740 | 40.909 | 308 | 170 | 7 | 19 | 319 | 24 | 326 | 5.11e-67 | 214 |
| MS.gene96335.t1 | MTR_2g029730 | 40.717 | 307 | 172 | 5 | 19 | 319 | 20 | 322 | 5.16e-67 | 214 |
| MS.gene96335.t1 | MTR_2g084000 | 40.439 | 319 | 174 | 7 | 6 | 319 | 8 | 315 | 2.09e-66 | 211 |
| MS.gene96335.t1 | MTR_2g029910 | 42.208 | 308 | 167 | 5 | 19 | 319 | 25 | 328 | 2.73e-66 | 212 |
| MS.gene96335.t1 | MTR_2g029560 | 39.604 | 303 | 175 | 4 | 22 | 319 | 22 | 321 | 2.84e-66 | 212 |
| MS.gene96335.t1 | MTR_3g466200 | 39.755 | 327 | 176 | 8 | 5 | 323 | 7 | 320 | 2.88e-66 | 211 |
| MS.gene96335.t1 | MTR_1g077000 | 37.072 | 321 | 185 | 6 | 6 | 323 | 21 | 327 | 2.97e-66 | 211 |
| MS.gene96335.t1 | MTR_4g029180 | 40.333 | 300 | 166 | 6 | 28 | 323 | 31 | 321 | 8.09e-66 | 210 |
| MS.gene96335.t1 | MTR_2g084020 | 39.308 | 318 | 178 | 6 | 6 | 319 | 8 | 314 | 9.50e-66 | 209 |
| MS.gene96335.t1 | MTR_3g105790 | 38.750 | 320 | 189 | 4 | 6 | 323 | 8 | 322 | 1.33e-65 | 209 |
| MS.gene96335.t1 | MTR_8g076820 | 39.394 | 297 | 171 | 4 | 28 | 319 | 34 | 326 | 1.39e-65 | 209 |
| MS.gene96335.t1 | MTR_3g467600 | 41.463 | 328 | 171 | 10 | 6 | 323 | 8 | 324 | 6.47e-65 | 207 |
| MS.gene96335.t1 | MTR_6g043280 | 39.024 | 328 | 180 | 6 | 6 | 323 | 15 | 332 | 1.35e-64 | 207 |
| MS.gene96335.t1 | MTR_3g094650 | 39.198 | 324 | 178 | 7 | 7 | 323 | 11 | 322 | 1.41e-64 | 207 |
| MS.gene96335.t1 | MTR_3g094670 | 40.625 | 320 | 171 | 7 | 11 | 323 | 15 | 322 | 1.54e-64 | 206 |
| MS.gene96335.t1 | MTR_2g437770 | 37.037 | 297 | 177 | 6 | 24 | 319 | 50 | 337 | 4.93e-64 | 206 |
| MS.gene96335.t1 | MTR_7g086820 | 38.538 | 301 | 172 | 6 | 22 | 319 | 18 | 308 | 5.89e-64 | 205 |
| MS.gene96335.t1 | MTR_7g072510 | 37.097 | 310 | 166 | 4 | 21 | 319 | 17 | 308 | 6.01e-64 | 205 |
| MS.gene96335.t1 | MTR_2g084010 | 39.308 | 318 | 178 | 6 | 6 | 319 | 8 | 314 | 6.49e-64 | 205 |
| MS.gene96335.t1 | MTR_2g008160 | 40.064 | 312 | 171 | 8 | 20 | 323 | 20 | 323 | 1.91e-63 | 204 |
| MS.gene96335.t1 | MTR_4g083710 | 39.877 | 326 | 177 | 8 | 5 | 323 | 11 | 324 | 3.63e-63 | 203 |
| MS.gene96335.t1 | MTR_2g029830 | 45.525 | 257 | 130 | 5 | 69 | 319 | 5 | 257 | 6.19e-63 | 201 |
| MS.gene96335.t1 | MTR_4g029200 | 39.308 | 318 | 178 | 5 | 10 | 323 | 32 | 338 | 7.26e-63 | 203 |
| MS.gene96335.t1 | MTR_5g074970 | 40.244 | 328 | 172 | 11 | 6 | 323 | 13 | 326 | 4.09e-62 | 201 |
| MS.gene96335.t1 | MTR_5g074760 | 39.697 | 330 | 172 | 10 | 6 | 323 | 7 | 321 | 4.18e-62 | 200 |
| MS.gene96335.t1 | MTR_4g122640 | 37.621 | 311 | 183 | 5 | 18 | 323 | 32 | 336 | 7.07e-62 | 200 |
| MS.gene96335.t1 | MTR_4g030890 | 37.134 | 307 | 184 | 6 | 16 | 319 | 92 | 392 | 1.20e-60 | 199 |
| MS.gene96335.t1 | MTR_4g125940 | 43.233 | 266 | 143 | 4 | 59 | 319 | 8 | 270 | 5.71e-60 | 193 |
| MS.gene96335.t1 | MTR_6g027440 | 37.658 | 316 | 185 | 6 | 7 | 319 | 4 | 310 | 7.57e-60 | 194 |
| MS.gene96335.t1 | MTR_5g074740 | 38.788 | 330 | 175 | 10 | 6 | 323 | 7 | 321 | 8.10e-60 | 194 |
| MS.gene96335.t1 | MTR_3g072190 | 36.810 | 326 | 189 | 5 | 5 | 323 | 3 | 318 | 9.63e-60 | 194 |
| MS.gene96335.t1 | MTR_4g074995 | 38.994 | 318 | 165 | 8 | 13 | 323 | 13 | 308 | 1.54e-59 | 193 |
| MS.gene96335.t1 | MTR_5g074710 | 38.788 | 330 | 175 | 10 | 6 | 323 | 7 | 321 | 3.20e-59 | 193 |
| MS.gene96335.t1 | MTR_4g029190 | 39.610 | 308 | 172 | 7 | 21 | 323 | 42 | 340 | 5.07e-59 | 193 |
| MS.gene96335.t1 | MTR_4g031140 | 36.393 | 305 | 181 | 6 | 20 | 319 | 24 | 320 | 5.77e-59 | 193 |
| MS.gene96335.t1 | MTR_3g094630 | 38.650 | 326 | 180 | 7 | 6 | 323 | 9 | 322 | 9.02e-59 | 192 |
| MS.gene96335.t1 | MTR_2g067440 | 35.152 | 330 | 182 | 3 | 22 | 321 | 58 | 385 | 1.44e-57 | 191 |
| MS.gene96335.t1 | MTR_0155s0040 | 35.948 | 306 | 179 | 6 | 21 | 323 | 24 | 315 | 2.51e-57 | 188 |
| MS.gene96335.t1 | MTR_5g014100 | 37.864 | 309 | 178 | 6 | 21 | 319 | 23 | 327 | 3.99e-57 | 188 |
| MS.gene96335.t1 | MTR_2g099175 | 35.061 | 328 | 198 | 6 | 5 | 323 | 14 | 335 | 1.14e-56 | 187 |
| MS.gene96335.t1 | MTR_1g022970 | 37.908 | 306 | 180 | 5 | 24 | 323 | 46 | 347 | 1.73e-55 | 184 |
| MS.gene96335.t1 | MTR_4g074990 | 37.920 | 327 | 166 | 10 | 5 | 323 | 8 | 305 | 2.88e-55 | 182 |
| MS.gene96335.t1 | MTR_1g115900 | 37.072 | 321 | 183 | 8 | 6 | 319 | 9 | 317 | 3.98e-55 | 182 |
| MS.gene96335.t1 | MTR_4g132490 | 35.505 | 307 | 185 | 6 | 23 | 323 | 28 | 327 | 7.95e-55 | 182 |
| MS.gene96335.t1 | MTR_5g049280 | 34.421 | 337 | 199 | 10 | 1 | 319 | 1 | 333 | 3.87e-54 | 180 |
| MS.gene96335.t1 | MTR_7g026990 | 34.700 | 317 | 194 | 6 | 6 | 319 | 12 | 318 | 4.55e-54 | 179 |
| MS.gene96335.t1 | MTR_4g132110 | 32.530 | 332 | 202 | 7 | 5 | 323 | 6 | 328 | 8.14e-54 | 179 |
| MS.gene96335.t1 | MTR_2g008730 | 35.093 | 322 | 175 | 5 | 7 | 323 | 9 | 301 | 2.70e-53 | 177 |
| MS.gene96335.t1 | MTR_2g077990 | 35.224 | 335 | 178 | 6 | 22 | 321 | 74 | 404 | 7.21e-53 | 179 |
| MS.gene96335.t1 | MTR_1g066710 | 34.768 | 302 | 186 | 5 | 22 | 319 | 25 | 319 | 8.96e-53 | 176 |
| MS.gene96335.t1 | MTR_1g066380 | 34.106 | 302 | 188 | 5 | 22 | 319 | 25 | 319 | 1.33e-52 | 176 |
| MS.gene96335.t1 | MTR_4g132110 | 32.641 | 337 | 200 | 9 | 5 | 323 | 6 | 333 | 1.53e-52 | 176 |
| MS.gene96335.t1 | MTR_2g078610 | 34.627 | 335 | 180 | 6 | 22 | 321 | 74 | 404 | 2.68e-52 | 177 |
| MS.gene96335.t1 | MTR_1g066640 | 35.099 | 302 | 185 | 5 | 22 | 319 | 25 | 319 | 4.59e-52 | 174 |
| MS.gene96335.t1 | MTR_3g466180 | 35.202 | 321 | 193 | 6 | 6 | 323 | 15 | 323 | 1.86e-50 | 170 |
| MS.gene96335.t1 | MTR_1g066680 | 34.323 | 303 | 185 | 6 | 22 | 319 | 25 | 318 | 6.59e-50 | 169 |
| MS.gene96335.t1 | MTR_2g008160 | 35.599 | 309 | 148 | 8 | 20 | 320 | 20 | 285 | 1.97e-48 | 164 |
| MS.gene96335.t1 | MTR_5g033470 | 33.968 | 315 | 187 | 9 | 22 | 323 | 71 | 377 | 1.85e-47 | 164 |
| MS.gene96335.t1 | MTR_3g105790 | 39.200 | 250 | 146 | 3 | 76 | 323 | 1 | 246 | 1.95e-47 | 160 |
| MS.gene96335.t1 | MTR_0147s0010 | 34.591 | 318 | 174 | 6 | 24 | 321 | 77 | 380 | 2.58e-47 | 164 |
| MS.gene96335.t1 | MTR_4g074980 | 34.483 | 319 | 173 | 8 | 8 | 323 | 9 | 294 | 4.58e-47 | 160 |
| MS.gene96335.t1 | MTR_3g072190 | 37.692 | 260 | 149 | 4 | 67 | 323 | 2 | 251 | 1.55e-46 | 158 |
| MS.gene96335.t1 | MTR_2g078280 | 34.365 | 323 | 173 | 6 | 22 | 309 | 74 | 392 | 4.08e-46 | 160 |
| MS.gene96335.t1 | MTR_5g074860 | 35.168 | 327 | 148 | 10 | 6 | 321 | 11 | 284 | 1.59e-45 | 156 |
| MS.gene96335.t1 | MTR_4g074980 | 38.039 | 255 | 141 | 7 | 8 | 255 | 9 | 253 | 5.68e-45 | 154 |
| MS.gene96335.t1 | MTR_2g067450 | 35.048 | 311 | 180 | 9 | 22 | 321 | 9 | 308 | 5.63e-43 | 150 |
| MS.gene96335.t1 | MTR_5g074700 | 39.394 | 231 | 113 | 7 | 97 | 323 | 7 | 214 | 5.73e-39 | 137 |
| MS.gene96335.t1 | MTR_1g066380 | 33.984 | 256 | 158 | 5 | 68 | 319 | 3 | 251 | 7.94e-39 | 138 |
| MS.gene96335.t1 | MTR_2g029880 | 42.553 | 188 | 96 | 3 | 134 | 319 | 7 | 184 | 3.48e-36 | 130 |
| MS.gene96335.t1 | MTR_2g008160 | 43.094 | 181 | 93 | 5 | 20 | 197 | 20 | 193 | 3.59e-36 | 129 |
| MS.gene96335.t1 | MTR_3g072210 | 37.696 | 191 | 110 | 4 | 135 | 323 | 55 | 238 | 4.62e-30 | 114 |
| MS.gene96335.t1 | MTR_7g072490 | 32.937 | 252 | 100 | 8 | 70 | 317 | 2 | 188 | 1.67e-26 | 104 |
| MS.gene96335.t1 | MTR_2g078560 | 30.455 | 220 | 122 | 3 | 133 | 321 | 99 | 318 | 5.10e-25 | 103 |
| MS.gene96335.t1 | MTR_5g058120 | 38.235 | 170 | 90 | 4 | 155 | 322 | 2 | 158 | 5.11e-24 | 99.0 |
| MS.gene96335.t1 | MTR_4g031040 | 32.432 | 148 | 81 | 3 | 116 | 261 | 5 | 135 | 6.38e-18 | 79.3 |
| MS.gene96335.t1 | MTR_1g098320 | 48.718 | 78 | 40 | 0 | 246 | 323 | 47 | 124 | 8.68e-18 | 79.0 |
| MS.gene96335.t1 | MTR_3g072260 | 37.063 | 143 | 64 | 4 | 4 | 131 | 2 | 133 | 1.14e-17 | 79.0 |
| MS.gene96335.t1 | MTR_7g086790 | 40.000 | 140 | 73 | 4 | 52 | 190 | 3 | 132 | 5.07e-17 | 78.6 |
| MS.gene96335.t1 | MTR_4g073410 | 28.467 | 274 | 141 | 10 | 55 | 320 | 32 | 258 | 5.07e-15 | 74.7 |
| MS.gene96335.t1 | MTR_4g114220 | 35.507 | 138 | 55 | 3 | 10 | 147 | 7 | 110 | 1.50e-13 | 67.4 |
| MS.gene96335.t1 | MTR_3g107060 | 27.675 | 271 | 120 | 9 | 55 | 308 | 105 | 316 | 2.44e-13 | 70.1 |
| MS.gene96335.t1 | MTR_3g462850 | 30.435 | 138 | 89 | 5 | 188 | 319 | 9 | 145 | 3.45e-12 | 63.9 |
| MS.gene96335.t1 | MTR_4g012865 | 41.791 | 67 | 36 | 1 | 24 | 87 | 77 | 143 | 4.78e-12 | 63.5 |
| MS.gene96335.t1 | MTR_7g107500 | 42.683 | 82 | 46 | 1 | 242 | 323 | 17 | 97 | 5.71e-12 | 61.6 |
| MS.gene96335.t1 | MTR_7g086810 | 31.667 | 120 | 56 | 2 | 22 | 141 | 4 | 97 | 5.03e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96335.t1 | AT2G18980 | 73.981 | 319 | 82 | 1 | 5 | 323 | 6 | 323 | 2.36e-175 | 488 |
| MS.gene96335.t1 | AT4G30170 | 76.238 | 303 | 71 | 1 | 21 | 323 | 24 | 325 | 4.11e-172 | 480 |
| MS.gene96335.t1 | AT3G49960 | 62.776 | 317 | 115 | 2 | 6 | 319 | 9 | 325 | 3.18e-147 | 417 |
| MS.gene96335.t1 | AT4G37530 | 65.017 | 303 | 103 | 1 | 20 | 319 | 23 | 325 | 7.80e-147 | 416 |
| MS.gene96335.t1 | AT5G67400 | 63.924 | 316 | 111 | 2 | 7 | 319 | 10 | 325 | 3.49e-144 | 410 |
| MS.gene96335.t1 | AT4G37520 | 63.455 | 301 | 107 | 1 | 22 | 319 | 25 | 325 | 8.13e-143 | 406 |
| MS.gene96335.t1 | AT4G37520 | 62.458 | 301 | 107 | 2 | 22 | 319 | 25 | 322 | 1.29e-138 | 395 |
| MS.gene96335.t1 | AT4G37530 | 65.385 | 260 | 87 | 1 | 20 | 276 | 23 | 282 | 7.97e-127 | 364 |
| MS.gene96335.t1 | AT5G14130 | 55.031 | 318 | 138 | 3 | 8 | 323 | 16 | 330 | 5.93e-115 | 335 |
| MS.gene96335.t1 | AT5G14130 | 55.031 | 318 | 138 | 3 | 8 | 323 | 57 | 371 | 1.13e-114 | 337 |
| MS.gene96335.t1 | AT4G17690 | 47.039 | 304 | 150 | 4 | 24 | 323 | 26 | 322 | 2.02e-89 | 270 |
| MS.gene96335.t1 | AT5G47000 | 45.988 | 324 | 163 | 5 | 6 | 323 | 13 | 330 | 3.74e-87 | 265 |
| MS.gene96335.t1 | AT2G34060 | 42.598 | 331 | 171 | 6 | 6 | 319 | 14 | 342 | 1.52e-85 | 261 |
| MS.gene96335.t1 | AT5G40150 | 43.042 | 309 | 155 | 5 | 20 | 319 | 28 | 324 | 6.46e-80 | 246 |
| MS.gene96335.t1 | AT4G11290 | 42.679 | 321 | 170 | 6 | 9 | 319 | 6 | 322 | 4.18e-79 | 244 |
| MS.gene96335.t1 | AT3G28200 | 41.311 | 305 | 167 | 4 | 19 | 319 | 16 | 312 | 1.19e-77 | 240 |
| MS.gene96335.t1 | AT1G05240 | 43.144 | 299 | 164 | 3 | 28 | 323 | 30 | 325 | 2.51e-77 | 239 |
| MS.gene96335.t1 | AT1G05250 | 43.144 | 299 | 164 | 3 | 28 | 323 | 30 | 325 | 2.51e-77 | 239 |
| MS.gene96335.t1 | AT1G24110 | 41.176 | 323 | 183 | 5 | 5 | 323 | 3 | 322 | 3.66e-77 | 239 |
| MS.gene96335.t1 | AT5G06730 | 41.121 | 321 | 179 | 5 | 6 | 319 | 13 | 330 | 3.79e-77 | 240 |
| MS.gene96335.t1 | AT5G06720 | 40.867 | 323 | 181 | 5 | 8 | 323 | 14 | 333 | 4.18e-76 | 237 |
| MS.gene96335.t1 | AT1G05260 | 40.850 | 306 | 173 | 4 | 22 | 323 | 24 | 325 | 6.44e-76 | 236 |
| MS.gene96335.t1 | AT3G50990 | 41.290 | 310 | 177 | 4 | 17 | 323 | 34 | 341 | 1.66e-75 | 236 |
| MS.gene96335.t1 | AT5G42180 | 40.379 | 317 | 176 | 7 | 9 | 321 | 8 | 315 | 5.67e-75 | 233 |
| MS.gene96335.t1 | AT2G38380 | 42.949 | 312 | 171 | 4 | 13 | 319 | 20 | 329 | 1.55e-74 | 233 |
| MS.gene96335.t1 | AT5G15180 | 38.838 | 327 | 193 | 4 | 1 | 323 | 6 | 329 | 2.58e-74 | 232 |
| MS.gene96335.t1 | AT3G01190 | 41.534 | 313 | 177 | 4 | 12 | 323 | 14 | 321 | 7.69e-74 | 230 |
| MS.gene96335.t1 | AT4G31760 | 41.615 | 322 | 175 | 5 | 8 | 323 | 12 | 326 | 1.39e-73 | 230 |
| MS.gene96335.t1 | AT5G51890 | 42.903 | 310 | 162 | 8 | 13 | 316 | 15 | 315 | 1.64e-73 | 229 |
| MS.gene96335.t1 | AT5G19880 | 42.368 | 321 | 174 | 7 | 11 | 323 | 12 | 329 | 1.95e-73 | 229 |
| MS.gene96335.t1 | AT2G38390 | 41.987 | 312 | 174 | 4 | 13 | 319 | 20 | 329 | 3.71e-73 | 229 |
| MS.gene96335.t1 | AT3G49120 | 41.534 | 313 | 175 | 4 | 13 | 319 | 21 | 331 | 4.54e-73 | 229 |
| MS.gene96335.t1 | AT4G36430 | 40.127 | 314 | 183 | 3 | 13 | 323 | 19 | 330 | 5.54e-73 | 229 |
| MS.gene96335.t1 | AT3G21770 | 41.176 | 306 | 172 | 5 | 19 | 320 | 24 | 325 | 6.84e-73 | 228 |
| MS.gene96335.t1 | AT3G32980 | 41.853 | 313 | 174 | 4 | 13 | 319 | 20 | 330 | 2.56e-72 | 228 |
| MS.gene96335.t1 | AT5G66390 | 40.062 | 322 | 184 | 4 | 7 | 323 | 16 | 333 | 5.44e-72 | 226 |
| MS.gene96335.t1 | AT3G49110 | 41.214 | 313 | 176 | 4 | 13 | 319 | 22 | 332 | 7.81e-72 | 226 |
| MS.gene96335.t1 | AT2G18150 | 41.000 | 300 | 172 | 3 | 27 | 323 | 39 | 336 | 3.54e-71 | 224 |
| MS.gene96335.t1 | AT1G71695 | 42.105 | 304 | 164 | 6 | 24 | 323 | 44 | 339 | 4.14e-71 | 224 |
| MS.gene96335.t1 | AT5G17820 | 40.867 | 323 | 180 | 6 | 1 | 323 | 2 | 313 | 5.32e-71 | 223 |
| MS.gene96335.t1 | AT5G17820 | 40.867 | 323 | 180 | 6 | 1 | 323 | 55 | 366 | 4.83e-70 | 222 |
| MS.gene96335.t1 | AT5G05340 | 41.748 | 309 | 161 | 6 | 22 | 323 | 28 | 324 | 5.56e-70 | 221 |
| MS.gene96335.t1 | AT2G18140 | 40.803 | 299 | 172 | 3 | 28 | 323 | 39 | 335 | 1.90e-69 | 220 |
| MS.gene96335.t1 | AT2G39040 | 41.558 | 308 | 165 | 8 | 22 | 319 | 44 | 346 | 2.65e-69 | 220 |
| MS.gene96335.t1 | AT2G41480 | 37.771 | 323 | 191 | 4 | 6 | 323 | 11 | 328 | 2.77e-69 | 219 |
| MS.gene96335.t1 | AT2G24800 | 39.542 | 306 | 176 | 5 | 22 | 323 | 29 | 329 | 2.10e-68 | 217 |
| MS.gene96335.t1 | AT5G64110 | 39.329 | 328 | 185 | 7 | 4 | 323 | 9 | 330 | 4.80e-68 | 216 |
| MS.gene96335.t1 | AT5G64120 | 39.394 | 297 | 174 | 4 | 27 | 323 | 38 | 328 | 1.52e-67 | 214 |
| MS.gene96335.t1 | AT4G08780 | 39.610 | 308 | 178 | 4 | 18 | 319 | 18 | 323 | 8.37e-67 | 213 |
| MS.gene96335.t1 | AT4G08770 | 39.550 | 311 | 180 | 4 | 15 | 319 | 15 | 323 | 1.05e-66 | 213 |
| MS.gene96335.t1 | AT1G14540 | 40.123 | 324 | 176 | 8 | 7 | 323 | 3 | 315 | 1.79e-66 | 211 |
| MS.gene96335.t1 | AT5G39580 | 39.375 | 320 | 181 | 7 | 6 | 323 | 11 | 319 | 1.26e-65 | 209 |
| MS.gene96335.t1 | AT5G58400 | 38.838 | 327 | 179 | 8 | 5 | 323 | 12 | 325 | 2.89e-64 | 206 |
| MS.gene96335.t1 | AT4G16270 | 39.597 | 298 | 169 | 7 | 27 | 319 | 53 | 344 | 7.20e-64 | 206 |
| MS.gene96335.t1 | AT1G14550 | 39.692 | 325 | 178 | 10 | 6 | 323 | 8 | 321 | 2.39e-63 | 204 |
| MS.gene96335.t1 | AT5G58390 | 41.538 | 325 | 170 | 9 | 7 | 323 | 4 | 316 | 4.00e-63 | 203 |
| MS.gene96335.t1 | AT2G22420 | 37.700 | 313 | 182 | 6 | 12 | 319 | 11 | 315 | 4.42e-63 | 203 |
| MS.gene96335.t1 | AT1G77100 | 39.677 | 310 | 171 | 6 | 20 | 323 | 20 | 319 | 5.29e-63 | 202 |
| MS.gene96335.t1 | AT1G49570 | 39.355 | 310 | 175 | 7 | 21 | 322 | 45 | 349 | 5.49e-63 | 203 |
| MS.gene96335.t1 | AT5G19890 | 40.066 | 302 | 171 | 5 | 22 | 319 | 28 | 323 | 8.02e-63 | 202 |
| MS.gene96335.t1 | AT3G03670 | 37.500 | 320 | 196 | 3 | 1 | 319 | 1 | 317 | 1.01e-62 | 202 |
| MS.gene96335.t1 | AT1G30870 | 37.624 | 303 | 178 | 6 | 24 | 323 | 51 | 345 | 1.26e-62 | 202 |
| MS.gene96335.t1 | AT4G33420 | 37.888 | 322 | 179 | 7 | 9 | 323 | 18 | 325 | 4.30e-62 | 200 |
| MS.gene96335.t1 | AT4G33420 | 37.888 | 322 | 179 | 7 | 9 | 323 | 65 | 372 | 2.20e-61 | 200 |
| MS.gene96335.t1 | AT4G25980 | 38.065 | 310 | 181 | 6 | 20 | 323 | 22 | 326 | 8.32e-61 | 197 |
| MS.gene96335.t1 | AT5G24070 | 36.013 | 311 | 186 | 5 | 16 | 319 | 27 | 331 | 4.94e-60 | 196 |
| MS.gene96335.t1 | AT1G44970 | 38.926 | 298 | 172 | 5 | 28 | 319 | 49 | 342 | 6.83e-59 | 193 |
| MS.gene96335.t1 | AT2G43480 | 35.048 | 311 | 189 | 5 | 20 | 323 | 31 | 335 | 1.71e-58 | 191 |
| MS.gene96335.t1 | AT5G64100 | 35.952 | 331 | 191 | 7 | 6 | 323 | 9 | 331 | 3.61e-58 | 191 |
| MS.gene96335.t1 | AT4G33870 | 32.440 | 336 | 189 | 4 | 22 | 321 | 66 | 399 | 4.87e-58 | 192 |
| MS.gene96335.t1 | AT5G22410 | 36.164 | 318 | 191 | 7 | 7 | 319 | 11 | 321 | 2.89e-56 | 186 |
| MS.gene96335.t1 | AT1G34510 | 36.304 | 303 | 171 | 8 | 22 | 319 | 20 | 305 | 3.58e-55 | 182 |
| MS.gene96335.t1 | AT2G35380 | 35.905 | 337 | 179 | 9 | 7 | 319 | 8 | 331 | 2.79e-54 | 181 |
| MS.gene96335.t1 | AT4G26010 | 36.562 | 320 | 187 | 8 | 2 | 319 | 28 | 333 | 6.99e-54 | 179 |
| MS.gene96335.t1 | AT4G26010 | 36.593 | 317 | 185 | 8 | 5 | 319 | 3 | 305 | 7.66e-54 | 179 |
| MS.gene96335.t1 | AT1G68850 | 34.202 | 307 | 186 | 9 | 24 | 319 | 30 | 331 | 6.31e-53 | 177 |
| MS.gene96335.t1 | AT2G37130 | 35.197 | 304 | 185 | 6 | 21 | 319 | 27 | 323 | 7.85e-52 | 174 |
| MS.gene96335.t1 | AT2G37130 | 35.690 | 297 | 179 | 6 | 28 | 319 | 3 | 292 | 1.51e-51 | 172 |
| MS.gene96335.t1 | AT4G21960 | 31.548 | 336 | 208 | 7 | 1 | 323 | 1 | 327 | 1.42e-50 | 171 |
| MS.gene96335.t1 | AT3G17070 | 32.934 | 334 | 200 | 9 | 3 | 321 | 13 | 337 | 1.22e-42 | 150 |
| MS.gene96335.t1 | AT2G35380 | 35.146 | 239 | 129 | 6 | 96 | 319 | 16 | 243 | 5.16e-36 | 130 |
| MS.gene96335.t1 | AT5G39580 | 42.268 | 194 | 101 | 5 | 6 | 198 | 11 | 194 | 1.12e-35 | 129 |
| MS.gene96335.t1 | AT2G24800 | 41.071 | 168 | 95 | 2 | 22 | 189 | 29 | 192 | 6.11e-33 | 122 |
| MS.gene96335.t1 | AT4G25980 | 38.983 | 177 | 104 | 3 | 19 | 195 | 66 | 238 | 2.41e-29 | 114 |
| MS.gene96335.t1 | AT3G17070 | 32.584 | 267 | 159 | 9 | 66 | 321 | 18 | 274 | 2.62e-28 | 110 |
| MS.gene96335.t1 | AT4G32320 | 29.057 | 265 | 158 | 11 | 11 | 261 | 75 | 323 | 3.31e-12 | 66.6 |
Find 71 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAATTCAACATTATAAAA+TGG | 0.234921 | 8.4:+6812338 | None:intergenic |
| AAAGCACTCTCAAAAGCTTT+TGG | 0.240385 | 8.4:+6811786 | None:intergenic |
| ATTCTAGGATCAACTCTTAA+AGG | 0.261695 | 8.4:+6811957 | None:intergenic |
| CTGGTAATCAAGGTGAAATT+AGG | 0.279887 | 8.4:-6811722 | MS.gene96335:CDS |
| TCCATGTTTATTGCAATTCT+AGG | 0.304893 | 8.4:+6811942 | None:intergenic |
| GATGGGTCAATTCTACTTCT+TGG | 0.306557 | 8.4:+6812020 | None:intergenic |
| AACAAGAGATGTCGTCAATT+TGG | 0.322334 | 8.4:-6812517 | MS.gene96335:intron |
| ACAGATATGGTTGCATTATC+AGG | 0.330722 | 8.4:-6812203 | MS.gene96335:intron |
| TATTAATGCTATTACTAAGT+TGG | 0.351024 | 8.4:-6811763 | MS.gene96335:CDS |
| AAGGACACATTTGCCTAAGT+TGG | 0.369798 | 8.4:+6811976 | None:intergenic |
| AGGCCAAGGCAGCCGTTGAT+AGG | 0.374458 | 8.4:-6812590 | MS.gene96335:CDS |
| TCTTCCATGATTGCTTTGTC+AGG | 0.378203 | 8.4:-6812823 | MS.gene96335:CDS |
| GGAAGGGTTGGTGTTAAAAC+TGG | 0.381845 | 8.4:-6811741 | MS.gene96335:CDS |
| ATTAATGCTATTACTAAGTT+GGG | 0.389915 | 8.4:-6811762 | MS.gene96335:CDS |
| TGTTTAGGTGCACATACAAT+TGG | 0.394824 | 8.4:-6812089 | MS.gene96335:intron |
| TACAATATGCTTTCCAACTT+AGG | 0.395009 | 8.4:-6811989 | MS.gene96335:CDS |
| ATGGGTCAATTCTACTTCTT+GGG | 0.405954 | 8.4:+6812021 | None:intergenic |
| CGAACCAATTGTTCAACATT+GGG | 0.410150 | 8.4:+6812908 | None:intergenic |
| GCATATTGTAAATTTAATGA+TGG | 0.417152 | 8.4:+6812002 | None:intergenic |
| AAGTGTTGTTTACTGATTCA+AGG | 0.418439 | 8.4:-6811842 | MS.gene96335:CDS |
| TGGCCTCTCTCAAACAGATA+TGG | 0.436444 | 8.4:-6812216 | MS.gene96335:CDS |
| ATCCCTATCAACGGCTGCCT+TGG | 0.441611 | 8.4:+6812587 | None:intergenic |
| GGATGTTCCCTCTCTGCCTT+CGG | 0.455966 | 8.4:+6812657 | None:intergenic |
| GAGACTTTGTTTCGGCACTT+AGG | 0.474560 | 8.4:+6812564 | None:intergenic |
| TTGTTGAAACTTCTGATTCA+CGG | 0.478111 | 8.4:+6812880 | None:intergenic |
| GGTGTTAAAACTGGTAATCA+AGG | 0.480424 | 8.4:-6811732 | MS.gene96335:CDS |
| ATGCCCCAATGTTGAACAAT+TGG | 0.480960 | 8.4:-6812912 | MS.gene96335:CDS |
| CTTCCATGATTGCTTTGTCA+GGG | 0.481760 | 8.4:-6812822 | MS.gene96335:intron |
| AGCTGATTCAAATTGAAATG+AGG | 0.482900 | 8.4:+6812260 | None:intergenic |
| AAGAACAGTCTGAGAGTGGC+AGG | 0.483844 | 8.4:+6812842 | None:intergenic |
| CAGCACAAGAGACTTTGTTT+CGG | 0.486532 | 8.4:+6812556 | None:intergenic |
| GCTGATTCAAATTGAAATGA+GGG | 0.493262 | 8.4:+6812261 | None:intergenic |
| CGCTTCTCAAATAGAATCTA+CGG | 0.494457 | 8.4:-6812050 | MS.gene96335:CDS |
| ATACCCTGACAAAGCAATCA+TGG | 0.497957 | 8.4:+6812819 | None:intergenic |
| AATACCATGTTTAATCTCCA+TGG | 0.501959 | 8.4:-6812236 | MS.gene96335:CDS |
| CATATTGTAAATTTAATGAT+GGG | 0.504769 | 8.4:+6812003 | None:intergenic |
| ACGAACCAATTGTTCAACAT+TGG | 0.505241 | 8.4:+6812907 | None:intergenic |
| TTCAAATTGAAATGAGGGCC+AGG | 0.507134 | 8.4:+6812266 | None:intergenic |
| GGCCAAGGCAGCCGTTGATA+GGG | 0.509062 | 8.4:-6812589 | MS.gene96335:CDS |
| TTTATAATGTTGAATTGGGA+AGG | 0.509337 | 8.4:-6812334 | MS.gene96335:CDS |
| AAGAATCTACAACAAGGAAA+AGG | 0.514037 | 8.4:-6811882 | MS.gene96335:CDS |
| TGCTATTACTAAGTTGGGAA+GGG | 0.516971 | 8.4:-6811757 | MS.gene96335:CDS |
| GTTTACTGATTCAAGGTCAA+AGG | 0.518163 | 8.4:-6811835 | MS.gene96335:CDS |
| CACAGTGTCAAAACCGTCCC+CGG | 0.519436 | 8.4:+6812617 | None:intergenic |
| CCGGCTAGTGATATATCATC+AGG | 0.522576 | 8.4:+6812636 | None:intergenic |
| AAATTAGGTTTGATTGTACC+AGG | 0.524795 | 8.4:-6811707 | MS.gene96335:CDS |
| CGTAGATTCTATTTGAGAAG+CGG | 0.527609 | 8.4:+6812051 | None:intergenic |
| ATTACTAAGTTGGGAAGGGT+TGG | 0.533445 | 8.4:-6811753 | MS.gene96335:CDS |
| ATGCTATTACTAAGTTGGGA+AGG | 0.537394 | 8.4:-6811758 | MS.gene96335:CDS |
| TTGAATTGGGAAGGCGTGAT+GGG | 0.540575 | 8.4:-6812325 | MS.gene96335:CDS |
| GTTGAATTGGGAAGGCGTGA+TGG | 0.540741 | 8.4:-6812326 | MS.gene96335:CDS |
| TGACACTGTGGTTAAGGCCA+AGG | 0.546297 | 8.4:-6812604 | MS.gene96335:CDS |
| CCTGATGATATATCACTAGC+CGG | 0.549221 | 8.4:-6812636 | MS.gene96335:CDS |
| AATGACAAGAAGACAAAGCT+TGG | 0.556626 | 8.4:+6812998 | None:intergenic |
| CTGATGATATATCACTAGCC+GGG | 0.558208 | 8.4:-6812635 | MS.gene96335:CDS |
| TATCTGTTTGAGAGAGGCCA+TGG | 0.565015 | 8.4:+6812219 | None:intergenic |
| TGCAACTCCGAAGGCAGAGA+GGG | 0.568528 | 8.4:-6812664 | MS.gene96335:CDS |
| TCCTAGAATTGCAATAAACA+TGG | 0.588665 | 8.4:-6811943 | MS.gene96335:CDS |
| TGTGCAATATTGCAGGCAGG+GGG | 0.610026 | 8.4:-6812362 | MS.gene96335:intron |
| GATATATCACTAGCCGGGGA+CGG | 0.624652 | 8.4:-6812630 | MS.gene96335:CDS |
| ATGGAAGAACAGTCTGAGAG+TGG | 0.625981 | 8.4:+6812838 | None:intergenic |
| CAACCATATCTGTTTGAGAG+AGG | 0.635637 | 8.4:+6812213 | None:intergenic |
| AGCTCAGCTCAACTCACTCG+TGG | 0.647235 | 8.4:-6812950 | MS.gene96335:CDS |
| GCACTTAGGATCCCTATCAA+CGG | 0.658126 | 8.4:+6812578 | None:intergenic |
| TGATGATATATCACTAGCCG+GGG | 0.662666 | 8.4:-6812634 | MS.gene96335:CDS |
| GAACCAATTGTTCAACATTG+GGG | 0.665173 | 8.4:+6812909 | None:intergenic |
| AGTGTTCAAAGAAATCTACC+TGG | 0.677375 | 8.4:-6812284 | MS.gene96335:CDS |
| GAGGCCATGGAGATTAAACA+TGG | 0.686465 | 8.4:+6812232 | None:intergenic |
| GTGCAATATTGCAGGCAGGG+GGG | 0.712500 | 8.4:-6812361 | MS.gene96335:intron |
| TTGCAACTCCGAAGGCAGAG+AGG | 0.722926 | 8.4:-6812665 | MS.gene96335:CDS |
| TATTTCAAGAATCTACAACA+AGG | 0.734171 | 8.4:-6811888 | MS.gene96335:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTAATTAAAAGGAAAA+AGG | + | chr8.4:6811938-6811957 | None:intergenic | 10.0% |
| !! | TTAGAGTTTAATTAATTAAA+AGG | + | chr8.4:6811945-6811964 | None:intergenic | 10.0% |
| !! | CATATTGTAAATTTAATGAT+GGG | + | chr8.4:6812705-6812724 | None:intergenic | 15.0% |
| !!! | AAGAAGTATAAACTATTATA+TGG | + | chr8.4:6812549-6812568 | None:intergenic | 15.0% |
| !!! | TAAGATTAGTATTACTATTT+TGG | + | chr8.4:6812322-6812341 | None:intergenic | 15.0% |
| !! | AGTATAAACTATTATATGGT+AGG | + | chr8.4:6812545-6812564 | None:intergenic | 20.0% |
| !! | ATATTTGTAATTCACTTACA+AGG | - | chr8.4:6812250-6812269 | MS.gene96335:CDS | 20.0% |
| !! | ATTAATGCTATTACTAAGTT+GGG | - | chr8.4:6812943-6812962 | MS.gene96335:CDS | 20.0% |
| !! | CCTAAACATACATATTATAT+AGG | + | chr8.4:6812604-6812623 | None:intergenic | 20.0% |
| !! | CCTATATAATATGTATGTTT+AGG | - | chr8.4:6812601-6812620 | MS.gene96335:CDS | 20.0% |
| !! | GCATATTGTAAATTTAATGA+TGG | + | chr8.4:6812706-6812725 | None:intergenic | 20.0% |
| !! | GTATAAACTATTATATGGTA+GGG | + | chr8.4:6812544-6812563 | None:intergenic | 20.0% |
| !! | TATTAATGCTATTACTAAGT+TGG | - | chr8.4:6812942-6812961 | MS.gene96335:CDS | 20.0% |
| !!! | AAACAAAAATTTGCTTTTAC+AGG | - | chr8.4:6811996-6812015 | MS.gene96335:CDS | 20.0% |
| !!! | AACAAAAATTTGCTTTTACA+GGG | - | chr8.4:6811997-6812016 | MS.gene96335:CDS | 20.0% |
| !!! | CCATTTTATAATGTTGAATT+GGG | - | chr8.4:6812367-6812386 | MS.gene96335:intron | 20.0% |
| ! | AAAGAAAGTGATGAAATGAA+TGG | + | chr8.4:6812216-6812235 | None:intergenic | 25.0% |
| ! | CCCAATTCAACATTATAAAA+TGG | + | chr8.4:6812370-6812389 | None:intergenic | 25.0% |
| ! | TATTTCAAGAATCTACAACA+AGG | - | chr8.4:6812817-6812836 | MS.gene96335:intron | 25.0% |
| ! | TTTATAATGTTGAATTGGGA+AGG | - | chr8.4:6812371-6812390 | MS.gene96335:intron | 25.0% |
| !!! | GCCATTTTATAATGTTGAAT+TGG | - | chr8.4:6812366-6812385 | MS.gene96335:intron | 25.0% |
| !!! | TATTGATTGTCAAACTTTTG+AGG | + | chr8.4:6812799-6812818 | None:intergenic | 25.0% |
| AAATTAGGTTTGATTGTACC+AGG | - | chr8.4:6812998-6813017 | MS.gene96335:CDS | 30.0% | |
| AAGAATCTACAACAAGGAAA+AGG | - | chr8.4:6812823-6812842 | MS.gene96335:CDS | 30.0% | |
| AATACCATGTTTAATCTCCA+TGG | - | chr8.4:6812469-6812488 | MS.gene96335:intron | 30.0% | |
| ATCTTATTGTGCAATATTGC+AGG | - | chr8.4:6812336-6812355 | MS.gene96335:CDS | 30.0% | |
| TACAATATGCTTTCCAACTT+AGG | - | chr8.4:6812716-6812735 | MS.gene96335:intron | 30.0% | |
| TCCATGTTTATTGCAATTCT+AGG | + | chr8.4:6812766-6812785 | None:intergenic | 30.0% | |
| TCCTAGAATTGCAATAAACA+TGG | - | chr8.4:6812762-6812781 | MS.gene96335:intron | 30.0% | |
| TTGTTGAAACTTCTGATTCA+CGG | + | chr8.4:6811828-6811847 | None:intergenic | 30.0% | |
| ! | AGCTGATTCAAATTGAAATG+AGG | + | chr8.4:6812448-6812467 | None:intergenic | 30.0% |
| ! | GCTGATTCAAATTGAAATGA+GGG | + | chr8.4:6812447-6812466 | None:intergenic | 30.0% |
| !! | AAGTGTTGTTTACTGATTCA+AGG | - | chr8.4:6812863-6812882 | MS.gene96335:CDS | 30.0% |
| !! | ATTCTAGGATCAACTCTTAA+AGG | + | chr8.4:6812751-6812770 | None:intergenic | 30.0% |
| AACAAGAGATGTCGTCAATT+TGG | - | chr8.4:6812188-6812207 | MS.gene96335:intron | 35.0% | |
| AATGACAAGAAGACAAAGCT+TGG | + | chr8.4:6811710-6811729 | None:intergenic | 35.0% | |
| ACAGATATGGTTGCATTATC+AGG | - | chr8.4:6812502-6812521 | MS.gene96335:intron | 35.0% | |
| ACGAACCAATTGTTCAACAT+TGG | + | chr8.4:6811801-6811820 | None:intergenic | 35.0% | |
| AGTGTTCAAAGAAATCTACC+TGG | - | chr8.4:6812421-6812440 | MS.gene96335:intron | 35.0% | |
| ATGGGTCAATTCTACTTCTT+GGG | + | chr8.4:6812687-6812706 | None:intergenic | 35.0% | |
| CGAACCAATTGTTCAACATT+GGG | + | chr8.4:6811800-6811819 | None:intergenic | 35.0% | |
| CGCTTCTCAAATAGAATCTA+CGG | - | chr8.4:6812655-6812674 | MS.gene96335:CDS | 35.0% | |
| CGTAGATTCTATTTGAGAAG+CGG | + | chr8.4:6812657-6812676 | None:intergenic | 35.0% | |
| CTGGTAATCAAGGTGAAATT+AGG | - | chr8.4:6812983-6813002 | MS.gene96335:CDS | 35.0% | |
| GAACCAATTGTTCAACATTG+GGG | + | chr8.4:6811799-6811818 | None:intergenic | 35.0% | |
| GGTGTTAAAACTGGTAATCA+AGG | - | chr8.4:6812973-6812992 | MS.gene96335:CDS | 35.0% | |
| TGTTTAGGTGCACATACAAT+TGG | - | chr8.4:6812616-6812635 | MS.gene96335:CDS | 35.0% | |
| ! | ATGCTATTACTAAGTTGGGA+AGG | - | chr8.4:6812947-6812966 | MS.gene96335:CDS | 35.0% |
| ! | TGCTATTACTAAGTTGGGAA+GGG | - | chr8.4:6812948-6812967 | MS.gene96335:CDS | 35.0% |
| !! | AAAGCACTCTCAAAAGCTTT+TGG | + | chr8.4:6812922-6812941 | None:intergenic | 35.0% |
| !! | GTTTACTGATTCAAGGTCAA+AGG | - | chr8.4:6812870-6812889 | MS.gene96335:CDS | 35.0% |
| AAGGACACATTTGCCTAAGT+TGG | + | chr8.4:6812732-6812751 | None:intergenic | 40.0% | |
| ATACCCTGACAAAGCAATCA+TGG | + | chr8.4:6811889-6811908 | None:intergenic | 40.0% | |
| ATGCCCCAATGTTGAACAAT+TGG | - | chr8.4:6811793-6811812 | MS.gene96335:CDS | 40.0% | |
| ATTGTGCAATATTGCAGGCA+GGG | - | chr8.4:6812341-6812360 | MS.gene96335:CDS | 40.0% | |
| CAACCATATCTGTTTGAGAG+AGG | + | chr8.4:6812495-6812514 | None:intergenic | 40.0% | |
| CCTGATGATATATCACTAGC+CGG | - | chr8.4:6812069-6812088 | MS.gene96335:CDS | 40.0% | |
| CTGATGATATATCACTAGCC+GGG | - | chr8.4:6812070-6812089 | MS.gene96335:CDS | 40.0% | |
| CTTCCATGATTGCTTTGTCA+GGG | - | chr8.4:6811883-6811902 | MS.gene96335:CDS | 40.0% | |
| GATGGGTCAATTCTACTTCT+TGG | + | chr8.4:6812688-6812707 | None:intergenic | 40.0% | |
| TATTGTGCAATATTGCAGGC+AGG | - | chr8.4:6812340-6812359 | MS.gene96335:CDS | 40.0% | |
| TCTTCCATGATTGCTTTGTC+AGG | - | chr8.4:6811882-6811901 | MS.gene96335:CDS | 40.0% | |
| TGATGATATATCACTAGCCG+GGG | - | chr8.4:6812071-6812090 | MS.gene96335:CDS | 40.0% | |
| TTCAAATTGAAATGAGGGCC+AGG | + | chr8.4:6812442-6812461 | None:intergenic | 40.0% | |
| ! | ATTACTAAGTTGGGAAGGGT+TGG | - | chr8.4:6812952-6812971 | MS.gene96335:CDS | 40.0% |
| ! | CAGCACAAGAGACTTTGTTT+CGG | + | chr8.4:6812152-6812171 | None:intergenic | 40.0% |
| !!! | CAAACTTTTGAGGTGAGACA+GGG | + | chr8.4:6812789-6812808 | None:intergenic | 40.0% |
| !!! | TCAAACTTTTGAGGTGAGAC+AGG | + | chr8.4:6812790-6812809 | None:intergenic | 40.0% |
| ATGGAAGAACAGTCTGAGAG+TGG | + | chr8.4:6811870-6811889 | None:intergenic | 45.0% | |
| CCGGCTAGTGATATATCATC+AGG | + | chr8.4:6812072-6812091 | None:intergenic | 45.0% | |
| GAGGCCATGGAGATTAAACA+TGG | + | chr8.4:6812476-6812495 | None:intergenic | 45.0% | |
| GCACTTAGGATCCCTATCAA+CGG | + | chr8.4:6812130-6812149 | None:intergenic | 45.0% | |
| TATCTGTTTGAGAGAGGCCA+TGG | + | chr8.4:6812489-6812508 | None:intergenic | 45.0% | |
| TGGCCTCTCTCAAACAGATA+TGG | - | chr8.4:6812489-6812508 | MS.gene96335:intron | 45.0% | |
| TTGTGCAATATTGCAGGCAG+GGG | - | chr8.4:6812342-6812361 | MS.gene96335:CDS | 45.0% | |
| ! | GAGACTTTGTTTCGGCACTT+AGG | + | chr8.4:6812144-6812163 | None:intergenic | 45.0% |
| ! | GATTTTGCTTGCAACTCCGA+AGG | - | chr8.4:6812032-6812051 | MS.gene96335:CDS | 45.0% |
| ! | TTGAATTGGGAAGGCGTGAT+GGG | - | chr8.4:6812380-6812399 | MS.gene96335:intron | 45.0% |
| !! | CGGTTTTGACACTGTGGTTA+AGG | - | chr8.4:6812095-6812114 | MS.gene96335:intron | 45.0% |
| !! | GGAAGGGTTGGTGTTAAAAC+TGG | - | chr8.4:6812964-6812983 | MS.gene96335:CDS | 45.0% |
| AAGAACAGTCTGAGAGTGGC+AGG | + | chr8.4:6811866-6811885 | None:intergenic | 50.0% | |
| GATATATCACTAGCCGGGGA+CGG | - | chr8.4:6812075-6812094 | MS.gene96335:CDS | 50.0% | |
| TGACACTGTGGTTAAGGCCA+AGG | - | chr8.4:6812101-6812120 | MS.gene96335:intron | 50.0% | |
| TGTGCAATATTGCAGGCAGG+GGG | - | chr8.4:6812343-6812362 | MS.gene96335:CDS | 50.0% | |
| ! | GTTGAATTGGGAAGGCGTGA+TGG | - | chr8.4:6812379-6812398 | MS.gene96335:intron | 50.0% |
| AGCTCAGCTCAACTCACTCG+TGG | - | chr8.4:6811755-6811774 | MS.gene96335:CDS | 55.0% | |
| ATCCCTATCAACGGCTGCCT+TGG | + | chr8.4:6812121-6812140 | None:intergenic | 55.0% | |
| CACAGTGTCAAAACCGTCCC+CGG | + | chr8.4:6812091-6812110 | None:intergenic | 55.0% | |
| GGATGTTCCCTCTCTGCCTT+CGG | + | chr8.4:6812051-6812070 | None:intergenic | 55.0% | |
| GTGCAATATTGCAGGCAGGG+GGG | - | chr8.4:6812344-6812363 | MS.gene96335:CDS | 55.0% | |
| TGCAACTCCGAAGGCAGAGA+GGG | - | chr8.4:6812041-6812060 | MS.gene96335:CDS | 55.0% | |
| TTGCAACTCCGAAGGCAGAG+AGG | - | chr8.4:6812040-6812059 | MS.gene96335:CDS | 55.0% | |
| AGGCCAAGGCAGCCGTTGAT+AGG | - | chr8.4:6812115-6812134 | MS.gene96335:intron | 60.0% | |
| GGCCAAGGCAGCCGTTGATA+GGG | - | chr8.4:6812116-6812135 | MS.gene96335:intron | 60.0% | |
| !! | CGGGGACGGTTTTGACACTG+TGG | - | chr8.4:6812089-6812108 | MS.gene96335:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 6811698 | 6813029 | 6811698 | ID=MS.gene96335 |
| chr8.4 | mRNA | 6811698 | 6813029 | 6811698 | ID=MS.gene96335.t1;Parent=MS.gene96335 |
| chr8.4 | exon | 6812823 | 6813029 | 6812823 | ID=MS.gene96335.t1.exon1;Parent=MS.gene96335.t1 |
| chr8.4 | CDS | 6812823 | 6813029 | 6812823 | ID=cds.MS.gene96335.t1;Parent=MS.gene96335.t1 |
| chr8.4 | exon | 6812518 | 6812709 | 6812518 | ID=MS.gene96335.t1.exon2;Parent=MS.gene96335.t1 |
| chr8.4 | CDS | 6812518 | 6812709 | 6812518 | ID=cds.MS.gene96335.t1;Parent=MS.gene96335.t1 |
| chr8.4 | exon | 6812204 | 6812369 | 6812204 | ID=MS.gene96335.t1.exon3;Parent=MS.gene96335.t1 |
| chr8.4 | CDS | 6812204 | 6812369 | 6812204 | ID=cds.MS.gene96335.t1;Parent=MS.gene96335.t1 |
| chr8.4 | exon | 6811698 | 6812104 | 6811698 | ID=MS.gene96335.t1.exon4;Parent=MS.gene96335.t1 |
| chr8.4 | CDS | 6811698 | 6812104 | 6811698 | ID=cds.MS.gene96335.t1;Parent=MS.gene96335.t1 |
| Gene Sequence |
| Protein sequence |
