Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88971.t1 | XP_003589551.1 | 80.8 | 318 | 9 | 2 | 1 | 266 | 1 | 318 | 1.40E-130 | 475.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88971.t1 | Q43872 | 61.7 | 311 | 66 | 2 | 7 | 266 | 9 | 317 | 9.2e-99 | 361.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88971.t1 | G7I8C1 | 80.8 | 318 | 9 | 2 | 1 | 266 | 1 | 318 | 1.0e-130 | 475.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050133 | MS.gene88971 | 0.838928 | 2.15E-57 | -1.69E-46 |
| MS.gene050329 | MS.gene88971 | 0.808045 | 3.76E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene88971 | 0.801901 | 7.23E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene88971 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene051158 | MS.gene88971 | 0.818505 | 1.89E-52 | -1.69E-46 |
| MS.gene051552 | MS.gene88971 | 0.801288 | 9.66E-49 | -1.69E-46 |
| MS.gene051996 | MS.gene88971 | 0.800025 | 1.75E-48 | -1.69E-46 |
| MS.gene052134 | MS.gene88971 | -0.801917 | 7.18E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene88971 | 0.806213 | 9.18E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene88971 | 0.826075 | 3.31E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene88971 | 0.801881 | 7.31E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene88971 | 0.809768 | 1.61E-50 | -1.69E-46 |
| MS.gene054138 | MS.gene88971 | 0.80442 | 2.18E-49 | -1.69E-46 |
| MS.gene054277 | MS.gene88971 | 0.831701 | 1.44E-55 | -1.69E-46 |
| MS.gene054742 | MS.gene88971 | 0.850428 | 1.71E-60 | -1.69E-46 |
| MS.gene056330 | MS.gene88971 | 0.837072 | 6.45E-57 | -1.69E-46 |
| MS.gene056690 | MS.gene88971 | 0.811902 | 5.55E-51 | -1.69E-46 |
| MS.gene056691 | MS.gene88971 | 0.806737 | 7.11E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene88971 | 0.857842 | 1.24E-62 | -1.69E-46 |
| MS.gene056922 | MS.gene88971 | 0.830736 | 2.48E-55 | -1.69E-46 |
| MS.gene056923 | MS.gene88971 | 0.84195 | 3.48E-58 | -1.69E-46 |
| MS.gene056924 | MS.gene88971 | 0.830823 | 2.36E-55 | -1.69E-46 |
| MS.gene056925 | MS.gene88971 | 0.820906 | 5.35E-53 | -1.69E-46 |
| MS.gene057544 | MS.gene88971 | 0.814636 | 1.39E-51 | -1.69E-46 |
| MS.gene059328 | MS.gene88971 | 0.8081 | 3.66E-50 | -1.69E-46 |
| MS.gene059891 | MS.gene88971 | 0.826352 | 2.84E-54 | -1.69E-46 |
| MS.gene060087 | MS.gene88971 | 0.844392 | 7.78E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene88971 | MS.gene004925 | PPI |
| MS.gene88971 | MS.gene062216 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88971.t1 | MTR_1g025980 | 80.818 | 318 | 9 | 2 | 1 | 266 | 1 | 318 | 0.0 | 508 |
| MS.gene88971.t1 | MTR_8g075100 | 61.538 | 299 | 63 | 2 | 18 | 265 | 21 | 318 | 7.49e-127 | 363 |
| MS.gene88971.t1 | MTR_5g022870 | 59.425 | 313 | 75 | 2 | 1 | 262 | 1 | 312 | 1.49e-125 | 360 |
| MS.gene88971.t1 | MTR_1g101830 | 45.484 | 310 | 116 | 4 | 9 | 265 | 12 | 321 | 1.78e-90 | 271 |
| MS.gene88971.t1 | MTR_1g077000 | 43.509 | 285 | 116 | 3 | 23 | 262 | 39 | 323 | 2.74e-78 | 240 |
| MS.gene88971.t1 | MTR_0155s0040 | 41.812 | 287 | 122 | 3 | 21 | 262 | 25 | 311 | 6.69e-77 | 236 |
| MS.gene88971.t1 | MTR_2g008710 | 39.432 | 317 | 128 | 6 | 7 | 262 | 8 | 321 | 2.77e-68 | 214 |
| MS.gene88971.t1 | MTR_2g088770 | 37.580 | 314 | 138 | 6 | 9 | 265 | 12 | 324 | 2.37e-65 | 207 |
| MS.gene88971.t1 | MTR_7g107520 | 39.274 | 303 | 126 | 6 | 18 | 265 | 20 | 319 | 2.74e-65 | 206 |
| MS.gene88971.t1 | MTR_3g094650 | 38.782 | 312 | 139 | 6 | 3 | 262 | 7 | 318 | 8.26e-64 | 202 |
| MS.gene88971.t1 | MTR_3g466200 | 37.500 | 312 | 141 | 6 | 3 | 262 | 7 | 316 | 1.57e-63 | 202 |
| MS.gene88971.t1 | MTR_4g030890 | 38.158 | 304 | 135 | 4 | 15 | 265 | 92 | 395 | 1.46e-62 | 202 |
| MS.gene88971.t1 | MTR_3g072190 | 38.854 | 314 | 140 | 6 | 1 | 262 | 1 | 314 | 2.01e-62 | 199 |
| MS.gene88971.t1 | MTR_3g092990 | 37.025 | 316 | 142 | 5 | 7 | 265 | 10 | 325 | 2.08e-62 | 199 |
| MS.gene88971.t1 | MTR_5g074970 | 38.111 | 307 | 137 | 5 | 9 | 262 | 16 | 322 | 1.16e-61 | 197 |
| MS.gene88971.t1 | MTR_5g083860 | 38.111 | 307 | 139 | 5 | 10 | 265 | 18 | 324 | 3.19e-61 | 196 |
| MS.gene88971.t1 | MTR_4g125940 | 39.062 | 320 | 132 | 9 | 7 | 266 | 13 | 329 | 4.79e-61 | 196 |
| MS.gene88971.t1 | MTR_1g009750 | 38.558 | 319 | 135 | 9 | 7 | 265 | 10 | 327 | 1.16e-60 | 195 |
| MS.gene88971.t1 | MTR_2g084090 | 37.671 | 292 | 128 | 6 | 26 | 265 | 28 | 317 | 2.78e-60 | 193 |
| MS.gene88971.t1 | MTR_7g029030 | 38.535 | 314 | 136 | 8 | 5 | 262 | 4 | 316 | 5.62e-60 | 192 |
| MS.gene88971.t1 | MTR_2g084020 | 38.356 | 292 | 126 | 7 | 26 | 265 | 28 | 317 | 6.97e-60 | 192 |
| MS.gene88971.t1 | MTR_5g021060 | 40.264 | 303 | 124 | 7 | 17 | 262 | 24 | 326 | 9.54e-60 | 192 |
| MS.gene88971.t1 | MTR_4g029180 | 39.931 | 288 | 122 | 7 | 26 | 262 | 30 | 317 | 1.00e-59 | 192 |
| MS.gene88971.t1 | MTR_2g084080 | 36.792 | 318 | 146 | 7 | 1 | 265 | 1 | 316 | 1.25e-59 | 192 |
| MS.gene88971.t1 | MTR_1g086320 | 38.532 | 327 | 138 | 9 | 1 | 265 | 7 | 332 | 2.90e-59 | 191 |
| MS.gene88971.t1 | MTR_4g029170 | 39.394 | 297 | 129 | 7 | 17 | 262 | 21 | 317 | 3.46e-59 | 191 |
| MS.gene88971.t1 | MTR_4g095450 | 36.825 | 315 | 140 | 8 | 7 | 265 | 12 | 323 | 3.54e-59 | 191 |
| MS.gene88971.t1 | MTR_2g084010 | 37.380 | 313 | 140 | 8 | 7 | 265 | 7 | 317 | 3.63e-59 | 191 |
| MS.gene88971.t1 | MTR_2g084110 | 36.478 | 318 | 147 | 7 | 1 | 265 | 1 | 316 | 3.68e-59 | 191 |
| MS.gene88971.t1 | MTR_2g084000 | 36.250 | 320 | 147 | 8 | 1 | 265 | 1 | 318 | 6.46e-59 | 190 |
| MS.gene88971.t1 | MTR_4g114210 | 35.514 | 321 | 143 | 6 | 1 | 262 | 1 | 316 | 7.89e-59 | 190 |
| MS.gene88971.t1 | MTR_7g086870 | 34.138 | 290 | 141 | 5 | 23 | 264 | 22 | 309 | 9.94e-59 | 189 |
| MS.gene88971.t1 | MTR_5g074860 | 37.700 | 313 | 142 | 7 | 7 | 266 | 13 | 325 | 1.13e-58 | 189 |
| MS.gene88971.t1 | MTR_5g017850 | 36.593 | 317 | 144 | 5 | 7 | 266 | 10 | 326 | 1.38e-58 | 189 |
| MS.gene88971.t1 | MTR_2g008160 | 40.637 | 251 | 127 | 4 | 21 | 251 | 22 | 270 | 2.72e-58 | 187 |
| MS.gene88971.t1 | MTR_5g017860 | 36.392 | 316 | 144 | 5 | 7 | 265 | 10 | 325 | 3.31e-58 | 188 |
| MS.gene88971.t1 | MTR_4g031140 | 36.455 | 299 | 137 | 4 | 20 | 265 | 25 | 323 | 3.51e-58 | 189 |
| MS.gene88971.t1 | MTR_2g029560 | 35.962 | 317 | 145 | 6 | 8 | 266 | 9 | 325 | 5.14e-58 | 188 |
| MS.gene88971.t1 | MTR_1g115900 | 34.277 | 318 | 156 | 6 | 1 | 265 | 3 | 320 | 5.50e-58 | 188 |
| MS.gene88971.t1 | MTR_5g074860 | 40.727 | 275 | 147 | 8 | 7 | 266 | 13 | 286 | 1.54e-57 | 185 |
| MS.gene88971.t1 | MTR_2g029750 | 37.748 | 302 | 130 | 7 | 23 | 266 | 29 | 330 | 5.79e-57 | 186 |
| MS.gene88971.t1 | MTR_7g086820 | 35.495 | 293 | 136 | 6 | 23 | 264 | 20 | 310 | 6.01e-57 | 185 |
| MS.gene88971.t1 | MTR_4g122640 | 37.377 | 305 | 136 | 6 | 17 | 266 | 32 | 336 | 9.50e-57 | 185 |
| MS.gene88971.t1 | MTR_4g046713 | 34.891 | 321 | 149 | 6 | 3 | 265 | 7 | 325 | 1.45e-56 | 184 |
| MS.gene88971.t1 | MTR_3g094670 | 38.141 | 312 | 141 | 6 | 3 | 262 | 7 | 318 | 1.90e-56 | 184 |
| MS.gene88971.t1 | MTR_2g029860 | 35.331 | 317 | 147 | 6 | 8 | 266 | 14 | 330 | 3.42e-56 | 184 |
| MS.gene88971.t1 | MTR_7g072480 | 34.505 | 313 | 154 | 6 | 2 | 265 | 5 | 315 | 9.41e-56 | 182 |
| MS.gene88971.t1 | MTR_1g054205 | 33.846 | 325 | 156 | 7 | 1 | 266 | 2 | 326 | 1.45e-55 | 182 |
| MS.gene88971.t1 | MTR_4g083710 | 35.000 | 320 | 153 | 7 | 1 | 265 | 4 | 323 | 2.61e-55 | 181 |
| MS.gene88971.t1 | MTR_2g028980 | 37.374 | 297 | 128 | 6 | 27 | 265 | 33 | 329 | 6.51e-55 | 181 |
| MS.gene88971.t1 | MTR_8g076820 | 37.500 | 304 | 133 | 6 | 19 | 265 | 26 | 329 | 1.15e-54 | 179 |
| MS.gene88971.t1 | MTR_2g029730 | 35.962 | 317 | 145 | 6 | 8 | 266 | 10 | 326 | 8.47e-54 | 177 |
| MS.gene88971.t1 | MTR_7g026990 | 35.069 | 288 | 139 | 4 | 27 | 266 | 35 | 322 | 1.00e-53 | 177 |
| MS.gene88971.t1 | MTR_7g093370 | 34.796 | 319 | 149 | 7 | 7 | 266 | 53 | 371 | 1.13e-53 | 178 |
| MS.gene88971.t1 | MTR_6g027440 | 32.686 | 309 | 153 | 6 | 7 | 262 | 4 | 310 | 1.33e-53 | 176 |
| MS.gene88971.t1 | MTR_2g008160 | 36.014 | 286 | 126 | 4 | 21 | 251 | 22 | 305 | 1.77e-53 | 176 |
| MS.gene88971.t1 | MTR_2g029815 | 37.086 | 302 | 132 | 6 | 23 | 266 | 29 | 330 | 1.84e-53 | 177 |
| MS.gene88971.t1 | MTR_7g072510 | 33.657 | 309 | 155 | 6 | 8 | 266 | 4 | 312 | 2.08e-53 | 176 |
| MS.gene88971.t1 | MTR_3g094630 | 37.821 | 312 | 142 | 6 | 3 | 262 | 7 | 318 | 2.16e-53 | 176 |
| MS.gene88971.t1 | MTR_5g049280 | 35.738 | 305 | 135 | 7 | 23 | 266 | 33 | 337 | 2.35e-53 | 176 |
| MS.gene88971.t1 | MTR_4g125940 | 40.809 | 272 | 99 | 8 | 55 | 266 | 5 | 274 | 2.75e-53 | 174 |
| MS.gene88971.t1 | MTR_4g087965 | 34.921 | 315 | 144 | 7 | 11 | 264 | 30 | 344 | 3.11e-53 | 176 |
| MS.gene88971.t1 | MTR_3g466180 | 38.065 | 310 | 142 | 6 | 7 | 266 | 14 | 323 | 3.60e-53 | 175 |
| MS.gene88971.t1 | MTR_2g008160 | 48.503 | 167 | 84 | 1 | 21 | 187 | 22 | 186 | 5.09e-53 | 171 |
| MS.gene88971.t1 | MTR_4g074995 | 34.169 | 319 | 144 | 7 | 1 | 265 | 1 | 307 | 8.07e-53 | 174 |
| MS.gene88971.t1 | MTR_2g029740 | 35.354 | 297 | 134 | 6 | 27 | 265 | 33 | 329 | 1.25e-52 | 175 |
| MS.gene88971.t1 | MTR_5g014100 | 37.209 | 301 | 127 | 6 | 27 | 265 | 30 | 330 | 1.82e-52 | 174 |
| MS.gene88971.t1 | MTR_4g029200 | 35.494 | 324 | 150 | 7 | 1 | 265 | 14 | 337 | 2.26e-52 | 174 |
| MS.gene88971.t1 | MTR_4g132490 | 32.075 | 318 | 159 | 5 | 1 | 263 | 9 | 324 | 2.27e-52 | 173 |
| MS.gene88971.t1 | MTR_2g040000 | 36.000 | 325 | 142 | 9 | 5 | 265 | 8 | 330 | 4.19e-52 | 173 |
| MS.gene88971.t1 | MTR_1g086490 | 49.223 | 193 | 91 | 6 | 1 | 187 | 7 | 198 | 8.29e-52 | 172 |
| MS.gene88971.t1 | MTR_2g029830 | 37.294 | 303 | 130 | 8 | 23 | 266 | 28 | 329 | 8.76e-52 | 172 |
| MS.gene88971.t1 | MTR_2g437770 | 35.216 | 301 | 139 | 5 | 17 | 265 | 44 | 340 | 1.38e-51 | 172 |
| MS.gene88971.t1 | MTR_4g029190 | 35.862 | 290 | 135 | 5 | 27 | 265 | 50 | 339 | 1.66e-51 | 171 |
| MS.gene88971.t1 | MTR_1g022970 | 37.049 | 305 | 134 | 6 | 19 | 265 | 42 | 346 | 2.16e-51 | 171 |
| MS.gene88971.t1 | MTR_4g133800 | 35.593 | 295 | 133 | 5 | 24 | 265 | 42 | 332 | 2.46e-51 | 171 |
| MS.gene88971.t1 | MTR_2g029850 | 34.906 | 318 | 148 | 7 | 7 | 266 | 14 | 330 | 3.16e-51 | 171 |
| MS.gene88971.t1 | MTR_5g074710 | 35.625 | 320 | 151 | 8 | 1 | 265 | 1 | 320 | 8.38e-51 | 169 |
| MS.gene88971.t1 | MTR_5g074740 | 35.312 | 320 | 152 | 8 | 1 | 265 | 1 | 320 | 1.48e-50 | 169 |
| MS.gene88971.t1 | MTR_2g029820 | 36.050 | 319 | 143 | 9 | 7 | 266 | 14 | 330 | 2.79e-50 | 169 |
| MS.gene88971.t1 | MTR_5g074760 | 34.936 | 312 | 150 | 7 | 7 | 265 | 9 | 320 | 6.48e-50 | 167 |
| MS.gene88971.t1 | MTR_1g038680 | 35.762 | 302 | 134 | 8 | 25 | 266 | 31 | 332 | 1.12e-49 | 166 |
| MS.gene88971.t1 | MTR_2g029800 | 33.962 | 318 | 151 | 7 | 7 | 266 | 14 | 330 | 1.70e-49 | 167 |
| MS.gene88971.t1 | MTR_5g016010 | 33.125 | 320 | 155 | 6 | 5 | 265 | 9 | 328 | 4.12e-49 | 165 |
| MS.gene88971.t1 | MTR_4g074980 | 35.088 | 285 | 159 | 7 | 7 | 265 | 9 | 293 | 8.85e-49 | 163 |
| MS.gene88971.t1 | MTR_3g092990 | 33.861 | 316 | 141 | 6 | 7 | 265 | 10 | 314 | 9.36e-49 | 164 |
| MS.gene88971.t1 | MTR_4g127670 | 35.452 | 299 | 131 | 7 | 23 | 262 | 24 | 319 | 3.36e-48 | 162 |
| MS.gene88971.t1 | MTR_3g467600 | 36.190 | 315 | 146 | 9 | 7 | 266 | 10 | 324 | 5.88e-48 | 162 |
| MS.gene88971.t1 | MTR_1g009750 | 35.331 | 317 | 131 | 11 | 7 | 265 | 10 | 310 | 7.24e-48 | 161 |
| MS.gene88971.t1 | MTR_3g072190 | 40.000 | 245 | 98 | 5 | 67 | 262 | 3 | 247 | 3.40e-47 | 157 |
| MS.gene88971.t1 | MTR_0286s0010 | 31.962 | 316 | 158 | 7 | 7 | 265 | 18 | 333 | 4.62e-47 | 160 |
| MS.gene88971.t1 | MTR_6g008075 | 31.962 | 316 | 158 | 7 | 7 | 265 | 18 | 333 | 4.62e-47 | 160 |
| MS.gene88971.t1 | MTR_6g043280 | 32.095 | 296 | 151 | 5 | 19 | 265 | 37 | 331 | 1.77e-46 | 158 |
| MS.gene88971.t1 | MTR_2g008730 | 33.861 | 316 | 122 | 6 | 7 | 262 | 9 | 297 | 1.90e-46 | 157 |
| MS.gene88971.t1 | MTR_4g074980 | 41.530 | 183 | 105 | 2 | 7 | 187 | 9 | 191 | 2.36e-46 | 155 |
| MS.gene88971.t1 | MTR_4g074990 | 32.166 | 314 | 145 | 6 | 5 | 265 | 6 | 304 | 3.82e-46 | 157 |
| MS.gene88971.t1 | MTR_8g062780 | 34.568 | 324 | 142 | 9 | 7 | 263 | 1 | 321 | 1.36e-44 | 153 |
| MS.gene88971.t1 | MTR_6g043240 | 34.797 | 296 | 137 | 8 | 22 | 266 | 41 | 331 | 1.38e-44 | 154 |
| MS.gene88971.t1 | MTR_3g105790 | 40.588 | 170 | 97 | 2 | 7 | 175 | 9 | 175 | 2.75e-44 | 152 |
| MS.gene88971.t1 | MTR_6g043460 | 32.069 | 290 | 148 | 4 | 22 | 262 | 35 | 324 | 1.89e-43 | 150 |
| MS.gene88971.t1 | MTR_2g029910 | 31.683 | 303 | 148 | 6 | 23 | 266 | 30 | 332 | 2.18e-41 | 145 |
| MS.gene88971.t1 | MTR_1g090760 | 41.176 | 187 | 102 | 7 | 8 | 187 | 11 | 196 | 8.54e-40 | 141 |
| MS.gene88971.t1 | MTR_2g078610 | 43.529 | 170 | 93 | 2 | 20 | 186 | 73 | 242 | 8.93e-40 | 142 |
| MS.gene88971.t1 | MTR_2g078280 | 42.941 | 170 | 94 | 2 | 20 | 186 | 73 | 242 | 1.09e-39 | 142 |
| MS.gene88971.t1 | MTR_2g077990 | 42.941 | 170 | 94 | 2 | 20 | 186 | 73 | 242 | 1.29e-38 | 139 |
| MS.gene88971.t1 | MTR_2g067440 | 42.857 | 168 | 94 | 2 | 20 | 186 | 57 | 223 | 1.60e-38 | 139 |
| MS.gene88971.t1 | MTR_2g067450 | 42.105 | 171 | 95 | 3 | 20 | 187 | 8 | 177 | 2.99e-36 | 131 |
| MS.gene88971.t1 | MTR_2g029830 | 36.434 | 258 | 104 | 8 | 68 | 266 | 5 | 261 | 2.46e-35 | 128 |
| MS.gene88971.t1 | MTR_4g132110 | 29.545 | 308 | 164 | 4 | 10 | 264 | 19 | 326 | 1.01e-34 | 127 |
| MS.gene88971.t1 | MTR_1g066710 | 29.866 | 298 | 156 | 5 | 21 | 265 | 25 | 322 | 3.19e-34 | 126 |
| MS.gene88971.t1 | MTR_2g099175 | 40.606 | 165 | 95 | 3 | 23 | 187 | 36 | 197 | 1.18e-33 | 125 |
| MS.gene88971.t1 | MTR_1g066380 | 30.435 | 299 | 153 | 6 | 21 | 265 | 25 | 322 | 1.64e-33 | 124 |
| MS.gene88971.t1 | MTR_4g132110 | 29.712 | 313 | 162 | 6 | 10 | 264 | 19 | 331 | 1.30e-32 | 122 |
| MS.gene88971.t1 | MTR_7g072490 | 40.541 | 185 | 96 | 5 | 69 | 250 | 2 | 175 | 1.87e-32 | 118 |
| MS.gene88971.t1 | MTR_5g033470 | 27.575 | 301 | 157 | 7 | 23 | 262 | 73 | 373 | 4.23e-32 | 121 |
| MS.gene88971.t1 | MTR_0147s0010 | 36.957 | 184 | 101 | 3 | 23 | 203 | 77 | 248 | 7.28e-31 | 118 |
| MS.gene88971.t1 | MTR_1g066640 | 29.431 | 299 | 156 | 6 | 21 | 265 | 25 | 322 | 9.36e-31 | 117 |
| MS.gene88971.t1 | MTR_1g066680 | 28.428 | 299 | 158 | 6 | 21 | 265 | 25 | 321 | 7.66e-30 | 114 |
| MS.gene88971.t1 | MTR_7g086790 | 44.068 | 118 | 64 | 1 | 70 | 187 | 17 | 132 | 1.14e-28 | 108 |
| MS.gene88971.t1 | MTR_3g072260 | 40.299 | 134 | 76 | 2 | 1 | 130 | 1 | 134 | 2.82e-26 | 100 |
| MS.gene88971.t1 | MTR_4g114220 | 56.627 | 83 | 27 | 2 | 50 | 132 | 30 | 103 | 5.68e-26 | 99.8 |
| MS.gene88971.t1 | MTR_1g089005 | 38.931 | 131 | 72 | 2 | 11 | 133 | 1 | 131 | 1.15e-24 | 96.7 |
| MS.gene88971.t1 | MTR_3g072210 | 35.000 | 180 | 67 | 5 | 133 | 262 | 55 | 234 | 1.86e-24 | 98.6 |
| MS.gene88971.t1 | MTR_3g105790 | 47.368 | 95 | 49 | 1 | 82 | 175 | 5 | 99 | 1.66e-23 | 96.3 |
| MS.gene88971.t1 | MTR_1g066380 | 30.040 | 253 | 122 | 6 | 67 | 265 | 3 | 254 | 3.07e-22 | 92.8 |
| MS.gene88971.t1 | MTR_6g048160 | 57.143 | 70 | 27 | 1 | 62 | 131 | 22 | 88 | 1.27e-21 | 86.7 |
| MS.gene88971.t1 | MTR_5g074700 | 32.727 | 220 | 86 | 7 | 96 | 265 | 6 | 213 | 1.49e-20 | 87.4 |
| MS.gene88971.t1 | MTR_3g107060 | 32.258 | 217 | 112 | 8 | 55 | 248 | 106 | 310 | 3.27e-19 | 85.9 |
| MS.gene88971.t1 | MTR_7g086810 | 34.746 | 118 | 52 | 1 | 23 | 140 | 6 | 98 | 3.75e-19 | 84.0 |
| MS.gene88971.t1 | MTR_7g086785 | 41.096 | 73 | 43 | 0 | 68 | 140 | 3 | 75 | 1.09e-15 | 72.4 |
| MS.gene88971.t1 | MTR_6g071110 | 44.565 | 92 | 40 | 2 | 90 | 181 | 81 | 161 | 1.34e-15 | 72.8 |
| MS.gene88971.t1 | MTR_4g073410 | 27.848 | 237 | 125 | 8 | 45 | 251 | 23 | 243 | 2.15e-15 | 74.7 |
| MS.gene88971.t1 | MTR_4g061140 | 34.177 | 158 | 82 | 5 | 114 | 251 | 56 | 211 | 7.12e-14 | 69.3 |
| MS.gene88971.t1 | MTR_4g061140 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 1.51e-13 | 68.9 |
| MS.gene88971.t1 | MTR_4g061140 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 1.98e-13 | 68.6 |
| MS.gene88971.t1 | MTR_4g012865 | 39.437 | 71 | 43 | 0 | 23 | 93 | 77 | 147 | 3.88e-13 | 65.9 |
| MS.gene88971.t1 | MTR_7g107500 | 40.659 | 91 | 49 | 3 | 179 | 265 | 7 | 96 | 2.65e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88971.t1 | AT5G42180 | 61.736 | 311 | 66 | 2 | 7 | 266 | 9 | 317 | 1.53e-135 | 385 |
| MS.gene88971.t1 | AT5G51890 | 44.582 | 323 | 119 | 4 | 1 | 265 | 1 | 321 | 2.80e-91 | 273 |
| MS.gene88971.t1 | AT4G33420 | 41.447 | 304 | 132 | 3 | 5 | 262 | 18 | 321 | 4.29e-76 | 234 |
| MS.gene88971.t1 | AT4G33420 | 41.447 | 304 | 132 | 3 | 5 | 262 | 65 | 368 | 1.80e-75 | 234 |
| MS.gene88971.t1 | AT2G41480 | 41.066 | 319 | 125 | 7 | 7 | 265 | 12 | 327 | 4.19e-68 | 214 |
| MS.gene88971.t1 | AT3G21770 | 38.235 | 306 | 131 | 6 | 16 | 264 | 22 | 326 | 8.52e-67 | 211 |
| MS.gene88971.t1 | AT1G05260 | 38.050 | 318 | 138 | 7 | 5 | 264 | 7 | 323 | 3.19e-66 | 209 |
| MS.gene88971.t1 | AT5G64120 | 37.919 | 298 | 129 | 4 | 21 | 265 | 33 | 327 | 2.90e-65 | 206 |
| MS.gene88971.t1 | AT5G39580 | 36.449 | 321 | 143 | 6 | 1 | 265 | 3 | 318 | 2.42e-63 | 201 |
| MS.gene88971.t1 | AT5G15180 | 39.130 | 299 | 126 | 6 | 22 | 265 | 31 | 328 | 6.82e-63 | 201 |
| MS.gene88971.t1 | AT4G16270 | 39.465 | 299 | 126 | 6 | 23 | 266 | 50 | 348 | 1.28e-62 | 200 |
| MS.gene88971.t1 | AT5G05340 | 38.832 | 291 | 127 | 5 | 23 | 262 | 30 | 320 | 4.05e-62 | 198 |
| MS.gene88971.t1 | AT4G11290 | 35.385 | 325 | 149 | 8 | 2 | 265 | 1 | 325 | 8.18e-62 | 197 |
| MS.gene88971.t1 | AT1G05240 | 37.874 | 301 | 121 | 7 | 23 | 262 | 26 | 321 | 3.72e-61 | 196 |
| MS.gene88971.t1 | AT1G05250 | 37.874 | 301 | 121 | 7 | 23 | 262 | 26 | 321 | 3.72e-61 | 196 |
| MS.gene88971.t1 | AT3G01190 | 37.855 | 317 | 135 | 8 | 1 | 262 | 8 | 317 | 8.19e-60 | 192 |
| MS.gene88971.t1 | AT5G17820 | 35.526 | 304 | 141 | 7 | 10 | 262 | 10 | 309 | 3.17e-59 | 191 |
| MS.gene88971.t1 | AT5G19890 | 37.578 | 322 | 137 | 7 | 5 | 265 | 8 | 326 | 6.00e-59 | 190 |
| MS.gene88971.t1 | AT5G66390 | 39.527 | 296 | 122 | 6 | 27 | 265 | 37 | 332 | 6.27e-59 | 191 |
| MS.gene88971.t1 | AT5G06720 | 34.796 | 319 | 146 | 7 | 6 | 262 | 11 | 329 | 1.57e-58 | 189 |
| MS.gene88971.t1 | AT5G17820 | 35.526 | 304 | 141 | 7 | 10 | 262 | 63 | 362 | 4.75e-58 | 189 |
| MS.gene88971.t1 | AT4G31760 | 35.350 | 314 | 143 | 5 | 9 | 265 | 15 | 325 | 5.88e-58 | 188 |
| MS.gene88971.t1 | AT2G18140 | 37.755 | 294 | 126 | 6 | 26 | 262 | 38 | 331 | 9.49e-58 | 187 |
| MS.gene88971.t1 | AT5G14130 | 38.387 | 310 | 131 | 8 | 11 | 262 | 19 | 326 | 2.05e-57 | 186 |
| MS.gene88971.t1 | AT2G22420 | 33.654 | 312 | 154 | 4 | 7 | 265 | 7 | 318 | 2.06e-57 | 186 |
| MS.gene88971.t1 | AT4G26010 | 35.275 | 309 | 153 | 6 | 1 | 264 | 1 | 307 | 5.49e-57 | 185 |
| MS.gene88971.t1 | AT5G14130 | 38.264 | 311 | 132 | 8 | 11 | 263 | 60 | 368 | 5.96e-57 | 186 |
| MS.gene88971.t1 | AT4G26010 | 35.275 | 309 | 153 | 6 | 1 | 264 | 29 | 335 | 1.05e-56 | 185 |
| MS.gene88971.t1 | AT2G18150 | 36.519 | 293 | 129 | 6 | 27 | 262 | 40 | 332 | 1.85e-56 | 184 |
| MS.gene88971.t1 | AT4G36430 | 38.567 | 293 | 123 | 8 | 27 | 262 | 34 | 326 | 5.91e-56 | 183 |
| MS.gene88971.t1 | AT1G14550 | 34.810 | 316 | 152 | 7 | 4 | 265 | 5 | 320 | 6.73e-56 | 182 |
| MS.gene88971.t1 | AT4G30170 | 35.948 | 306 | 133 | 8 | 19 | 265 | 23 | 324 | 7.49e-56 | 182 |
| MS.gene88971.t1 | AT2G18980 | 34.161 | 322 | 149 | 7 | 3 | 265 | 5 | 322 | 1.01e-55 | 182 |
| MS.gene88971.t1 | AT3G50990 | 37.255 | 306 | 135 | 6 | 17 | 265 | 35 | 340 | 4.38e-55 | 181 |
| MS.gene88971.t1 | AT1G44970 | 38.235 | 306 | 131 | 6 | 18 | 265 | 40 | 345 | 4.92e-55 | 181 |
| MS.gene88971.t1 | AT2G24800 | 37.542 | 301 | 127 | 6 | 23 | 265 | 31 | 328 | 7.15e-55 | 180 |
| MS.gene88971.t1 | AT4G37520 | 37.124 | 299 | 129 | 6 | 23 | 262 | 27 | 325 | 8.31e-55 | 180 |
| MS.gene88971.t1 | AT2G35380 | 35.692 | 325 | 145 | 7 | 5 | 265 | 10 | 334 | 9.77e-55 | 180 |
| MS.gene88971.t1 | AT3G03670 | 31.962 | 316 | 159 | 5 | 2 | 262 | 3 | 317 | 1.15e-54 | 179 |
| MS.gene88971.t1 | AT1G77100 | 34.951 | 309 | 147 | 5 | 7 | 262 | 8 | 315 | 1.20e-54 | 179 |
| MS.gene88971.t1 | AT1G14540 | 34.951 | 309 | 149 | 7 | 9 | 265 | 6 | 314 | 1.70e-54 | 179 |
| MS.gene88971.t1 | AT5G06730 | 33.746 | 323 | 152 | 7 | 6 | 266 | 12 | 334 | 1.81e-54 | 180 |
| MS.gene88971.t1 | AT1G71695 | 36.149 | 296 | 137 | 5 | 19 | 262 | 40 | 335 | 3.13e-54 | 179 |
| MS.gene88971.t1 | AT4G37530 | 36.808 | 307 | 130 | 7 | 18 | 262 | 21 | 325 | 3.66e-54 | 178 |
| MS.gene88971.t1 | AT2G38380 | 36.223 | 323 | 146 | 8 | 3 | 265 | 10 | 332 | 3.66e-54 | 179 |
| MS.gene88971.t1 | AT5G39580 | 45.699 | 186 | 98 | 2 | 1 | 186 | 3 | 185 | 3.72e-54 | 175 |
| MS.gene88971.t1 | AT1G68850 | 34.754 | 305 | 137 | 7 | 23 | 265 | 30 | 334 | 7.59e-54 | 177 |
| MS.gene88971.t1 | AT4G08770 | 37.705 | 305 | 126 | 9 | 23 | 265 | 24 | 326 | 1.21e-53 | 177 |
| MS.gene88971.t1 | AT4G25980 | 33.648 | 318 | 146 | 7 | 5 | 263 | 12 | 323 | 2.63e-53 | 176 |
| MS.gene88971.t1 | AT5G19880 | 36.728 | 324 | 142 | 9 | 4 | 265 | 6 | 328 | 2.81e-53 | 176 |
| MS.gene88971.t1 | AT1G49570 | 35.410 | 305 | 138 | 5 | 19 | 264 | 44 | 348 | 3.64e-53 | 176 |
| MS.gene88971.t1 | AT4G25980 | 47.561 | 164 | 84 | 1 | 23 | 186 | 71 | 232 | 1.26e-52 | 173 |
| MS.gene88971.t1 | AT3G49120 | 35.826 | 321 | 144 | 9 | 5 | 265 | 16 | 334 | 1.61e-52 | 174 |
| MS.gene88971.t1 | AT5G58390 | 35.599 | 309 | 146 | 6 | 7 | 262 | 4 | 312 | 1.64e-52 | 173 |
| MS.gene88971.t1 | AT3G28200 | 35.354 | 297 | 140 | 6 | 21 | 265 | 19 | 315 | 2.19e-52 | 173 |
| MS.gene88971.t1 | AT5G64100 | 35.811 | 296 | 131 | 6 | 25 | 265 | 39 | 330 | 8.68e-52 | 172 |
| MS.gene88971.t1 | AT4G08780 | 37.049 | 305 | 128 | 9 | 23 | 265 | 24 | 326 | 9.29e-52 | 172 |
| MS.gene88971.t1 | AT4G37520 | 36.455 | 299 | 128 | 7 | 23 | 262 | 27 | 322 | 1.63e-51 | 171 |
| MS.gene88971.t1 | AT5G40150 | 34.564 | 298 | 142 | 5 | 21 | 265 | 30 | 327 | 2.58e-51 | 171 |
| MS.gene88971.t1 | AT2G38390 | 33.962 | 318 | 151 | 8 | 7 | 265 | 15 | 332 | 2.98e-51 | 171 |
| MS.gene88971.t1 | AT3G49960 | 34.985 | 323 | 146 | 8 | 1 | 262 | 6 | 325 | 3.18e-51 | 171 |
| MS.gene88971.t1 | AT5G47000 | 34.286 | 315 | 149 | 6 | 7 | 263 | 13 | 327 | 3.85e-51 | 170 |
| MS.gene88971.t1 | AT3G32980 | 35.093 | 322 | 145 | 10 | 4 | 265 | 16 | 333 | 5.08e-51 | 171 |
| MS.gene88971.t1 | AT4G17690 | 36.054 | 294 | 135 | 5 | 23 | 263 | 26 | 319 | 8.60e-51 | 169 |
| MS.gene88971.t1 | AT5G64110 | 38.176 | 296 | 122 | 8 | 27 | 265 | 38 | 329 | 2.24e-50 | 168 |
| MS.gene88971.t1 | AT5G58400 | 34.839 | 310 | 147 | 7 | 7 | 262 | 13 | 321 | 7.07e-50 | 167 |
| MS.gene88971.t1 | AT2G24800 | 48.795 | 166 | 81 | 2 | 23 | 187 | 31 | 193 | 2.46e-49 | 163 |
| MS.gene88971.t1 | AT1G34510 | 32.414 | 290 | 150 | 4 | 18 | 262 | 17 | 305 | 1.28e-47 | 160 |
| MS.gene88971.t1 | AT5G67400 | 33.022 | 321 | 154 | 8 | 3 | 262 | 5 | 325 | 6.49e-47 | 159 |
| MS.gene88971.t1 | AT4G37530 | 47.727 | 176 | 86 | 4 | 18 | 187 | 21 | 196 | 3.95e-46 | 156 |
| MS.gene88971.t1 | AT2G34060 | 33.663 | 303 | 140 | 7 | 23 | 264 | 42 | 344 | 1.54e-45 | 156 |
| MS.gene88971.t1 | AT2G39040 | 48.214 | 168 | 84 | 3 | 23 | 187 | 46 | 213 | 4.16e-45 | 155 |
| MS.gene88971.t1 | AT3G49110 | 32.919 | 322 | 156 | 9 | 4 | 265 | 14 | 335 | 8.17e-45 | 154 |
| MS.gene88971.t1 | AT4G33870 | 40.284 | 211 | 123 | 2 | 21 | 228 | 66 | 276 | 1.99e-43 | 152 |
| MS.gene88971.t1 | AT1G30870 | 33.566 | 286 | 138 | 4 | 15 | 251 | 43 | 325 | 2.42e-43 | 150 |
| MS.gene88971.t1 | AT3G17070 | 31.229 | 301 | 149 | 4 | 23 | 265 | 38 | 338 | 4.02e-42 | 147 |
| MS.gene88971.t1 | AT2G43480 | 33.223 | 301 | 136 | 7 | 23 | 262 | 35 | 331 | 1.05e-41 | 146 |
| MS.gene88971.t1 | AT5G22410 | 42.932 | 191 | 97 | 7 | 2 | 186 | 5 | 189 | 6.13e-41 | 144 |
| MS.gene88971.t1 | AT1G24110 | 30.094 | 319 | 166 | 6 | 2 | 263 | 1 | 319 | 9.91e-41 | 143 |
| MS.gene88971.t1 | AT4G21960 | 30.503 | 318 | 161 | 5 | 7 | 264 | 8 | 325 | 4.53e-37 | 134 |
| MS.gene88971.t1 | AT2G35380 | 36.475 | 244 | 93 | 6 | 84 | 265 | 3 | 246 | 1.78e-34 | 125 |
| MS.gene88971.t1 | AT5G24070 | 40.120 | 167 | 94 | 4 | 23 | 187 | 35 | 197 | 2.11e-34 | 127 |
| MS.gene88971.t1 | AT2G37130 | 28.620 | 297 | 158 | 6 | 23 | 265 | 30 | 326 | 9.30e-30 | 114 |
| MS.gene88971.t1 | AT2G37130 | 28.475 | 295 | 157 | 6 | 25 | 265 | 1 | 295 | 2.03e-29 | 112 |
| MS.gene88971.t1 | AT3G17070 | 28.185 | 259 | 127 | 5 | 65 | 265 | 18 | 275 | 3.88e-25 | 101 |
| MS.gene88971.t1 | AT4G32320 | 30.545 | 275 | 143 | 11 | 7 | 256 | 74 | 325 | 1.88e-20 | 89.4 |
| MS.gene88971.t1 | AT4G35970 | 29.289 | 239 | 118 | 8 | 45 | 251 | 21 | 240 | 6.21e-15 | 73.2 |
| MS.gene88971.t1 | AT1G07890 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 5.44e-13 | 67.4 |
| MS.gene88971.t1 | AT1G07890 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 5.44e-13 | 67.4 |
| MS.gene88971.t1 | AT1G07890 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 5.44e-13 | 67.4 |
| MS.gene88971.t1 | AT1G07890 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 5.44e-13 | 67.4 |
| MS.gene88971.t1 | AT1G07890 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 5.44e-13 | 67.4 |
| MS.gene88971.t1 | AT1G07890 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 5.44e-13 | 67.4 |
| MS.gene88971.t1 | AT1G07890 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 5.44e-13 | 67.4 |
| MS.gene88971.t1 | AT1G07890 | 34.177 | 158 | 82 | 5 | 114 | 251 | 90 | 245 | 5.48e-13 | 67.4 |
| MS.gene88971.t1 | AT3G42570 | 34.615 | 104 | 66 | 1 | 85 | 186 | 44 | 147 | 3.50e-11 | 60.5 |
Find 63 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTGGGAATGAGCATATT+TGG | 0.147681 | 1.4:+206727 | None:intergenic |
| CTACCATCCTTTCTTCCTTT+TGG | 0.165408 | 1.4:+207237 | None:intergenic |
| GAGAGAAGCTTTGTTGTAAT+TGG | 0.166362 | 1.4:+207160 | None:intergenic |
| CGTGTCTTGTGCTGATATTT+TGG | 0.259261 | 1.4:-207601 | MS.gene88971:CDS |
| AAGCTCTTTCAAATTCCATT+TGG | 0.303757 | 1.4:+206711 | None:intergenic |
| TGAAATATGGTATCAACTAT+TGG | 0.315933 | 1.4:-208134 | None:intergenic |
| CAAGATTTGGTTGCTCTCTC+AGG | 0.318920 | 1.4:-207120 | MS.gene88971:intron |
| AGGACTTTCCTTGCAAGATT+TGG | 0.322053 | 1.4:-207133 | MS.gene88971:CDS |
| AGAGAAGCTTTGTTGTAATT+GGG | 0.360077 | 1.4:+207161 | None:intergenic |
| AGCTCTTTCAAATTCCATTT+GGG | 0.368047 | 1.4:+206712 | None:intergenic |
| TGCACTTGCTAGAGAAGTTA+AGG | 0.379758 | 1.4:+208085 | None:intergenic |
| TTTGGAAACCAATGCTTTAG+TGG | 0.389117 | 1.4:+206745 | None:intergenic |
| CTTTCATGATTGCTTCATAA+GGG | 0.389599 | 1.4:-207946 | MS.gene88971:intron |
| ACTTTCATGATTGCTTCATA+AGG | 0.395701 | 1.4:-207947 | MS.gene88971:CDS |
| TATTACAAACTACTACTTCA+AGG | 0.421931 | 1.4:-206812 | MS.gene88971:CDS |
| AATGCATGCAATGATATGTT+TGG | 0.428472 | 1.4:+207675 | None:intergenic |
| GCATTGGAAGCAGTTTGTCC+AGG | 0.436667 | 1.4:-207627 | MS.gene88971:CDS |
| GGGAAAGAATAAAGCAGAAA+AGG | 0.443506 | 1.4:-207706 | MS.gene88971:CDS |
| CAAATATGCTCATTCCCAAA+TGG | 0.448115 | 1.4:-206726 | MS.gene88971:CDS |
| ATGTGGCAGTTGAGTCCAAT+GGG | 0.454545 | 1.4:+206849 | None:intergenic |
| AGTGGGAGCTGGCAATTGTC+TGG | 0.471619 | 1.4:+207194 | None:intergenic |
| TGCTAGGGATGCTGTCACTC+TGG | 0.481519 | 1.4:-207571 | MS.gene88971:intron |
| CAGGTAGACTCCATCGTGGC+TGG | 0.491648 | 1.4:-208029 | MS.gene88971:CDS |
| GTCTGTTCTGTTGAAATCAA+AGG | 0.492739 | 1.4:-207727 | MS.gene88971:CDS |
| TTAGTCTGGAGGGCCAAGTT+GGG | 0.493333 | 1.4:-207265 | MS.gene88971:intron |
| CATGGTGGTGCTCATGATGA+TGG | 0.493487 | 1.4:-208111 | MS.gene88971:CDS |
| ATTAGTCTGGAGGGCCAAGT+TGG | 0.498984 | 1.4:-207266 | MS.gene88971:intron |
| TAATATATGAAGGGGTGTGA+TGG | 0.499161 | 1.4:-207750 | MS.gene88971:intron |
| TCATCCAACCACTAAAGCAT+TGG | 0.501090 | 1.4:-206753 | MS.gene88971:CDS |
| TCTGTTCTGTTGAAATCAAA+GGG | 0.513793 | 1.4:-207726 | MS.gene88971:CDS |
| TAATTGGGAGATGTTGAAAG+TGG | 0.516813 | 1.4:+207176 | None:intergenic |
| GAAACCAATGCTTTAGTGGT+TGG | 0.519796 | 1.4:+206749 | None:intergenic |
| CCAATGGTGGAAAAGAGATC+AGG | 0.521759 | 1.4:-206655 | MS.gene88971:CDS |
| CATTGGAAGCAGTTTGTCCA+GGG | 0.522226 | 1.4:-207626 | MS.gene88971:CDS |
| TCAGCACAAGACACGACCCC+TGG | 0.525663 | 1.4:+207609 | None:intergenic |
| GGAAGTTCCAAAAGGAAGAA+AGG | 0.526411 | 1.4:-207244 | MS.gene88971:CDS |
| ATAAGCATTGTCAAAATATG+TGG | 0.528552 | 1.4:+206832 | None:intergenic |
| AATATATGAAGGGGTGTGAT+GGG | 0.529898 | 1.4:-207749 | MS.gene88971:intron |
| CTATGAGCATACATGTCCTC+AGG | 0.533702 | 1.4:-208048 | MS.gene88971:CDS |
| TGAGAACGCTAAGAAAGCAT+TGG | 0.540855 | 1.4:-207643 | MS.gene88971:CDS |
| TGCATACGAAGCAGAGCTGA+TGG | 0.544302 | 1.4:+207969 | None:intergenic |
| AAGAATAAAGCAGAAAAGGA+TGG | 0.545325 | 1.4:-207702 | MS.gene88971:CDS |
| CAACAAAGCTTCTCTCAAAG+AGG | 0.549993 | 1.4:-207153 | MS.gene88971:CDS |
| ATGAGTAGCATCACCAATGG+TGG | 0.560539 | 1.4:-206668 | MS.gene88971:CDS |
| TGTGAGTGGCATTAGTCTGG+AGG | 0.564494 | 1.4:-207276 | MS.gene88971:intron |
| GTGAGTGGCATTAGTCTGGA+GGG | 0.578114 | 1.4:-207275 | MS.gene88971:intron |
| ATCATCTAACGAGATTACAT+TGG | 0.588718 | 1.4:+206630 | None:intergenic |
| GTTCCAAAAGGAAGAAAGGA+TGG | 0.591676 | 1.4:-207240 | MS.gene88971:CDS |
| CCAAGTTGGGAAGTTCCAAA+AGG | 0.599075 | 1.4:-207252 | MS.gene88971:CDS |
| TATGTGGCAGTTGAGTCCAA+TGG | 0.599988 | 1.4:+206848 | None:intergenic |
| AAAGGATGGTAGAATCTCAA+AGG | 0.603107 | 1.4:-207226 | MS.gene88971:CDS |
| TATGGTATCAACTATTGGCA+TGG | 0.604185 | 1.4:-208129 | MS.gene88971:CDS |
| GAGAGCAACCAAATCTTGCA+AGG | 0.622104 | 1.4:+207125 | None:intergenic |
| GCATGCAATGATATGTTTGG+AGG | 0.631708 | 1.4:+207678 | None:intergenic |
| GAGATGTTGAAAGTGGGAGC+TGG | 0.642062 | 1.4:+207183 | None:intergenic |
| AAAATGAGTAGCATCACCAA+TGG | 0.654023 | 1.4:-206671 | MS.gene88971:CDS |
| AATTGGGAGATGTTGAAAGT+GGG | 0.657381 | 1.4:+207177 | None:intergenic |
| ATTGGAAGCAGTTTGTCCAG+GGG | 0.679665 | 1.4:-207625 | MS.gene88971:CDS |
| GTGTACTGCACCAGCCACGA+TGG | 0.698358 | 1.4:+208019 | None:intergenic |
| GGTATCAACTATTGGCATGG+TGG | 0.708481 | 1.4:-208126 | MS.gene88971:CDS |
| GCCACGATGGAGTCTACCTG+AGG | 0.712283 | 1.4:+208032 | None:intergenic |
| TCCTCAGGTAGACTCCATCG+TGG | 0.718540 | 1.4:-208033 | MS.gene88971:CDS |
| TGTGGCAGTTGAGTCCAATG+GGG | 0.768538 | 1.4:+206850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGCAAAATTAATTAATA+TGG | - | chr1.4:207342-207361 | MS.gene88971:intron | 10.0% |
| !! | TATATATATAATATATGAAG+GGG | - | chr1.4:207001-207020 | MS.gene88971:intron | 10.0% |
| !!! | ATGATGTTATATTTTTATGT+AGG | - | chr1.4:207731-207750 | MS.gene88971:CDS | 15.0% |
| !!! | TCTGTTACTTAAAATTAAAA+TGG | - | chr1.4:207433-207452 | MS.gene88971:intron | 15.0% |
| !! | CAAATGTCATATTAAAAACA+AGG | - | chr1.4:207871-207890 | MS.gene88971:intron | 20.0% |
| !!! | ATGTTATATTTTTATGTAGG+AGG | - | chr1.4:207734-207753 | MS.gene88971:CDS | 20.0% |
| !!! | TGAATTTATGGATTCTATTT+TGG | + | chr1.4:207793-207812 | None:intergenic | 20.0% |
| !!! | TTTTAATATGACATTTGCTT+TGG | + | chr1.4:207868-207887 | None:intergenic | 20.0% |
| ! | TATTACAAACTACTACTTCA+AGG | - | chr1.4:207947-207966 | MS.gene88971:CDS | 25.0% |
| !! | ATAAGCATTGTCAAAATATG+TGG | + | chr1.4:207930-207949 | None:intergenic | 25.0% |
| !! | CCACTAACTAATTTTGAATT+GGG | - | chr1.4:207459-207478 | MS.gene88971:intron | 25.0% |
| !! | TCCACTAACTAATTTTGAAT+TGG | - | chr1.4:207458-207477 | MS.gene88971:intron | 25.0% |
| !!! | TTTATGGATTCTATTTTGGA+AGG | + | chr1.4:207789-207808 | None:intergenic | 25.0% |
| AAAAACAAGGTGAAAAATGC+AGG | - | chr1.4:207884-207903 | MS.gene88971:intron | 30.0% | |
| AAAACAAGGTGAAAAATGCA+GGG | - | chr1.4:207885-207904 | MS.gene88971:intron | 30.0% | |
| AAGAATAAAGCAGAAAAGGA+TGG | - | chr1.4:207057-207076 | MS.gene88971:intron | 30.0% | |
| AAGCTCTTTCAAATTCCATT+TGG | + | chr1.4:208051-208070 | None:intergenic | 30.0% | |
| AATGCATGCAATGATATGTT+TGG | + | chr1.4:207087-207106 | None:intergenic | 30.0% | |
| ACTTTCATGATTGCTTCATA+AGG | - | chr1.4:206812-206831 | MS.gene88971:CDS | 30.0% | |
| AGCTCTTTCAAATTCCATTT+GGG | + | chr1.4:208050-208069 | None:intergenic | 30.0% | |
| CCCAATTCAAAATTAGTTAG+TGG | + | chr1.4:207462-207481 | None:intergenic | 30.0% | |
| CTTTCATGATTGCTTCATAA+GGG | - | chr1.4:206813-206832 | MS.gene88971:CDS | 30.0% | |
| TAATATGACATTTGCTTTGG+AGG | + | chr1.4:207865-207884 | None:intergenic | 30.0% | |
| TCTGTTCTGTTGAAATCAAA+GGG | - | chr1.4:207033-207052 | MS.gene88971:intron | 30.0% | |
| !! | AGAGAAGCTTTGTTGTAATT+GGG | + | chr1.4:207601-207620 | None:intergenic | 30.0% |
| AAAATGAGTAGCATCACCAA+TGG | - | chr1.4:208088-208107 | MS.gene88971:CDS | 35.0% | |
| AAAGGATGGTAGAATCTCAA+AGG | - | chr1.4:207533-207552 | MS.gene88971:intron | 35.0% | |
| AATTGGGAGATGTTGAAAGT+GGG | + | chr1.4:207585-207604 | None:intergenic | 35.0% | |
| CAAATATGCTCATTCCCAAA+TGG | - | chr1.4:208033-208052 | MS.gene88971:CDS | 35.0% | |
| CATAAATTCAGCCCTAAACA+AGG | - | chr1.4:207803-207822 | MS.gene88971:intron | 35.0% | |
| CATTTGGGAATGAGCATATT+TGG | + | chr1.4:208035-208054 | None:intergenic | 35.0% | |
| GGGAAAGAATAAAGCAGAAA+AGG | - | chr1.4:207053-207072 | MS.gene88971:intron | 35.0% | |
| GTCTGTTCTGTTGAAATCAA+AGG | - | chr1.4:207032-207051 | MS.gene88971:intron | 35.0% | |
| TAATTGGGAGATGTTGAAAG+TGG | + | chr1.4:207586-207605 | None:intergenic | 35.0% | |
| TTTGGAAACCAATGCTTTAG+TGG | + | chr1.4:208017-208036 | None:intergenic | 35.0% | |
| ! | AATATATGAAGGGGTGTGAT+GGG | - | chr1.4:207010-207029 | MS.gene88971:intron | 35.0% |
| ! | CTTGTTTAGGGCTGAATTTA+TGG | + | chr1.4:207805-207824 | None:intergenic | 35.0% |
| ! | TAATATATGAAGGGGTGTGA+TGG | - | chr1.4:207009-207028 | MS.gene88971:intron | 35.0% |
| ! | TGGAACTGTTTTGTCATTCA+TGG | + | chr1.4:206773-206792 | None:intergenic | 35.0% |
| !! | ATTTTGAATTGGGTTGTGAG+TGG | - | chr1.4:207469-207488 | MS.gene88971:intron | 35.0% |
| !! | GAGAGAAGCTTTGTTGTAAT+TGG | + | chr1.4:207602-207621 | None:intergenic | 35.0% |
| !! | GATGCTACTCATTTTGATCA+TGG | + | chr1.4:208083-208102 | None:intergenic | 35.0% |
| AGGACTTTCCTTGCAAGATT+TGG | - | chr1.4:207626-207645 | MS.gene88971:CDS | 40.0% | |
| ATGTTCACGCGAGAAGTAAA+TGG | + | chr1.4:207253-207272 | None:intergenic | 40.0% | |
| CAACAAAGCTTCTCTCAAAG+AGG | - | chr1.4:207606-207625 | MS.gene88971:CDS | 40.0% | |
| GAAACCAATGCTTTAGTGGT+TGG | + | chr1.4:208013-208032 | None:intergenic | 40.0% | |
| GCATGCAATGATATGTTTGG+AGG | + | chr1.4:207084-207103 | None:intergenic | 40.0% | |
| GGAAGTTCCAAAAGGAAGAA+AGG | - | chr1.4:207515-207534 | MS.gene88971:intron | 40.0% | |
| GTTCCAAAAGGAAGAAAGGA+TGG | - | chr1.4:207519-207538 | MS.gene88971:intron | 40.0% | |
| TCATCCAACCACTAAAGCAT+TGG | - | chr1.4:208006-208025 | MS.gene88971:CDS | 40.0% | |
| ! | CTACCATCCTTTCTTCCTTT+TGG | + | chr1.4:207525-207544 | None:intergenic | 40.0% |
| ! | TGAGAACGCTAAGAAAGCAT+TGG | - | chr1.4:207116-207135 | MS.gene88971:intron | 40.0% |
| ! | TGCACTTGCTAGAGAAGTTA+AGG | + | chr1.4:206677-206696 | None:intergenic | 40.0% |
| !! | CAAATGATGGGTTTAAGGAC+GGG | + | chr1.4:207835-207854 | None:intergenic | 40.0% |
| !! | CGTGTCTTGTGCTGATATTT+TGG | - | chr1.4:207158-207177 | MS.gene88971:CDS | 40.0% |
| !! | GCAAATGATGGGTTTAAGGA+CGG | + | chr1.4:207836-207855 | None:intergenic | 40.0% |
| !! | GCTTGCAAATGATGGGTTTA+AGG | + | chr1.4:207840-207859 | None:intergenic | 40.0% |
| !!! | ATATTTTGGCTCTTGCTGCT+AGG | - | chr1.4:207172-207191 | MS.gene88971:CDS | 40.0% |
| !!! | TATTTTGGCTCTTGCTGCTA+GGG | - | chr1.4:207173-207192 | MS.gene88971:CDS | 40.0% |
| ATGAACAATGTGCAAACCCC+AGG | + | chr1.4:207766-207785 | None:intergenic | 45.0% | |
| ATGAGTAGCATCACCAATGG+TGG | - | chr1.4:208091-208110 | MS.gene88971:CDS | 45.0% | |
| ATGTGGCAGTTGAGTCCAAT+GGG | + | chr1.4:207913-207932 | None:intergenic | 45.0% | |
| ATTGGAAGCAGTTTGTCCAG+GGG | - | chr1.4:207134-207153 | MS.gene88971:CDS | 45.0% | |
| CATTGGAAGCAGTTTGTCCA+GGG | - | chr1.4:207133-207152 | MS.gene88971:CDS | 45.0% | |
| CTATGAGCATACATGTCCTC+AGG | - | chr1.4:206711-206730 | MS.gene88971:CDS | 45.0% | |
| GAGAGCAACCAAATCTTGCA+AGG | + | chr1.4:207637-207656 | None:intergenic | 45.0% | |
| GGAGGTTGCTTGCAAATGAT+GGG | + | chr1.4:207847-207866 | None:intergenic | 45.0% | |
| GGTATCAACTATTGGCATGG+TGG | - | chr1.4:206633-206652 | MS.gene88971:CDS | 45.0% | |
| TATGTGGCAGTTGAGTCCAA+TGG | + | chr1.4:207914-207933 | None:intergenic | 45.0% | |
| TGAACAATGTGCAAACCCCA+GGG | + | chr1.4:207765-207784 | None:intergenic | 45.0% | |
| TGGAGGTTGCTTGCAAATGA+TGG | + | chr1.4:207848-207867 | None:intergenic | 45.0% | |
| ! | ACGGGTCAACACCTTGTTTA+GGG | + | chr1.4:207817-207836 | None:intergenic | 45.0% |
| ! | CAAGATTTGGTTGCTCTCTC+AGG | - | chr1.4:207639-207658 | MS.gene88971:CDS | 45.0% |
| ! | CCAAGTTGGGAAGTTCCAAA+AGG | - | chr1.4:207507-207526 | MS.gene88971:intron | 45.0% |
| ! | CCAATGGTGGAAAAGAGATC+AGG | - | chr1.4:208104-208123 | MS.gene88971:CDS | 45.0% |
| ! | CCTGATCTCTTTTCCACCAT+TGG | + | chr1.4:208107-208126 | None:intergenic | 45.0% |
| !!! | CCTTTTGGAACTTCCCAACT+TGG | + | chr1.4:207510-207529 | None:intergenic | 45.0% |
| !! | ATATATATATAATATATGAA+GGG | - | chr1.4:207000-207019 | MS.gene88971:intron | 5.0% |
| !! | TATATATATATAATATATGA+AGG | - | chr1.4:206999-207018 | MS.gene88971:intron | 5.0% |
| !!! | TATTTTGTTTTTTTTTTTTA+AGG | + | chr1.4:207410-207429 | None:intergenic | 5.0% |
| GAAAAATGCAGGGTCCCCAT+TGG | - | chr1.4:207895-207914 | MS.gene88971:intron | 50.0% | |
| GAGATGTTGAAAGTGGGAGC+TGG | + | chr1.4:207579-207598 | None:intergenic | 50.0% | |
| GCATTGGAAGCAGTTTGTCC+AGG | - | chr1.4:207132-207151 | MS.gene88971:CDS | 50.0% | |
| GGTTGTGAGTGGCATTAGTC+TGG | - | chr1.4:207480-207499 | MS.gene88971:intron | 50.0% | |
| TATGTAGGAGGTCACACCCT+GGG | - | chr1.4:207746-207765 | MS.gene88971:intron | 50.0% | |
| TGCATACGAAGCAGAGCTGA+TGG | + | chr1.4:206793-206812 | None:intergenic | 50.0% | |
| TGTGGCAGTTGAGTCCAATG+GGG | + | chr1.4:207912-207931 | None:intergenic | 50.0% | |
| TTAGTCTGGAGGGCCAAGTT+GGG | - | chr1.4:207494-207513 | MS.gene88971:intron | 50.0% | |
| TTATGTAGGAGGTCACACCC+TGG | - | chr1.4:207745-207764 | MS.gene88971:intron | 50.0% | |
| ! | ATTAGTCTGGAGGGCCAAGT+TGG | - | chr1.4:207493-207512 | MS.gene88971:intron | 50.0% |
| ! | CATGGTGGTGCTCATGATGA+TGG | - | chr1.4:206648-206667 | MS.gene88971:CDS | 50.0% |
| ! | GACGGGTCAACACCTTGTTT+AGG | + | chr1.4:207818-207837 | None:intergenic | 50.0% |
| ! | GTGAGTGGCATTAGTCTGGA+GGG | - | chr1.4:207484-207503 | MS.gene88971:intron | 50.0% |
| ! | TGTGAGTGGCATTAGTCTGG+AGG | - | chr1.4:207483-207502 | MS.gene88971:intron | 50.0% |
| AGTGGGAGCTGGCAATTGTC+TGG | + | chr1.4:207568-207587 | None:intergenic | 55.0% | |
| ATGTAGGAGGTCACACCCTG+GGG | - | chr1.4:207747-207766 | MS.gene88971:intron | 55.0% | |
| TCCTCAGGTAGACTCCATCG+TGG | - | chr1.4:206726-206745 | MS.gene88971:CDS | 55.0% | |
| TGCTAGGGATGCTGTCACTC+TGG | - | chr1.4:207188-207207 | MS.gene88971:CDS | 55.0% | |
| CAGGTAGACTCCATCGTGGC+TGG | - | chr1.4:206730-206749 | MS.gene88971:CDS | 60.0% | |
| GCCACGATGGAGTCTACCTG+AGG | + | chr1.4:206730-206749 | None:intergenic | 60.0% | |
| GTGTACTGCACCAGCCACGA+TGG | + | chr1.4:206743-206762 | None:intergenic | 60.0% | |
| TCAGCACAAGACACGACCCC+TGG | + | chr1.4:207153-207172 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 206631 | 208150 | 206631 | ID=MS.gene88971 |
| chr1.4 | mRNA | 206631 | 208150 | 206631 | ID=MS.gene88971.t1;Parent=MS.gene88971 |
| chr1.4 | exon | 207947 | 208150 | 207947 | ID=MS.gene88971.t1.exon1;Parent=MS.gene88971.t1 |
| chr1.4 | CDS | 207947 | 208150 | 207947 | ID=cds.MS.gene88971.t1;Parent=MS.gene88971.t1 |
| chr1.4 | exon | 207572 | 207760 | 207572 | ID=MS.gene88971.t1.exon2;Parent=MS.gene88971.t1 |
| chr1.4 | CDS | 207572 | 207760 | 207572 | ID=cds.MS.gene88971.t1;Parent=MS.gene88971.t1 |
| chr1.4 | exon | 207121 | 207283 | 207121 | ID=MS.gene88971.t1.exon3;Parent=MS.gene88971.t1 |
| chr1.4 | CDS | 207121 | 207283 | 207121 | ID=cds.MS.gene88971.t1;Parent=MS.gene88971.t1 |
| chr1.4 | exon | 206631 | 206875 | 206631 | ID=MS.gene88971.t1.exon4;Parent=MS.gene88971.t1 |
| chr1.4 | CDS | 206631 | 206875 | 206631 | ID=cds.MS.gene88971.t1;Parent=MS.gene88971.t1 |
| Gene Sequence |
| Protein sequence |
