Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007010.t1 | XP_013450328.1 | 100 | 392 | 0 | 0 | 1 | 392 | 1 | 392 | 3.90E-198 | 700.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007010.t1 | Q8LFS6 | 63.2 | 402 | 128 | 8 | 1 | 392 | 1 | 392 | 1.3e-128 | 461.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007010.t1 | A0A072U4V5 | 100.0 | 392 | 0 | 0 | 1 | 392 | 1 | 392 | 2.8e-198 | 700.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37610 | MS.gene007010 | PPI |
| MS.gene034408 | MS.gene007010 | PPI |
| MS.gene007010 | MS.gene84284 | PPI |
| MS.gene23814 | MS.gene007010 | PPI |
| MS.gene35490 | MS.gene007010 | PPI |
| MS.gene39783 | MS.gene007010 | PPI |
| MS.gene016896 | MS.gene007010 | PPI |
| MS.gene65332 | MS.gene007010 | PPI |
| MS.gene022650 | MS.gene007010 | PPI |
| MS.gene027709 | MS.gene007010 | PPI |
| MS.gene055437 | MS.gene007010 | PPI |
| MS.gene035578 | MS.gene007010 | PPI |
| MS.gene44305 | MS.gene007010 | PPI |
| MS.gene86544 | MS.gene007010 | PPI |
| MS.gene037838 | MS.gene007010 | PPI |
| MS.gene72659 | MS.gene007010 | PPI |
| MS.gene69969 | MS.gene007010 | PPI |
| MS.gene066499 | MS.gene007010 | PPI |
| MS.gene47029 | MS.gene007010 | PPI |
| MS.gene64891 | MS.gene007010 | PPI |
| MS.gene29182 | MS.gene007010 | PPI |
| MS.gene86206 | MS.gene007010 | PPI |
| MS.gene99555 | MS.gene007010 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007010.t1 | MTR_7g107580 | 100.000 | 392 | 0 | 0 | 1 | 392 | 1 | 392 | 0.0 | 812 |
| MS.gene007010.t1 | MTR_7g107580 | 99.745 | 392 | 0 | 1 | 1 | 392 | 1 | 391 | 0.0 | 805 |
| MS.gene007010.t1 | MTR_7g107580 | 99.710 | 345 | 0 | 1 | 1 | 345 | 1 | 344 | 0.0 | 706 |
| MS.gene007010.t1 | MTR_4g122650 | 48.045 | 179 | 89 | 2 | 16 | 191 | 88 | 265 | 8.92e-51 | 181 |
| MS.gene007010.t1 | MTR_7g109810 | 30.556 | 216 | 127 | 2 | 16 | 214 | 74 | 283 | 6.73e-29 | 116 |
| MS.gene007010.t1 | MTR_7g109810 | 32.984 | 191 | 105 | 3 | 16 | 189 | 74 | 258 | 5.75e-28 | 115 |
| MS.gene007010.t1 | MTR_7g109810 | 32.461 | 191 | 106 | 2 | 16 | 189 | 74 | 258 | 5.80e-28 | 111 |
| MS.gene007010.t1 | MTR_4g085540 | 28.374 | 289 | 173 | 11 | 1 | 270 | 198 | 471 | 5.29e-16 | 80.1 |
| MS.gene007010.t1 | MTR_3g065190 | 25.514 | 243 | 166 | 6 | 6 | 245 | 16 | 246 | 1.38e-14 | 75.1 |
| MS.gene007010.t1 | MTR_1g097440 | 26.542 | 373 | 204 | 18 | 5 | 320 | 197 | 556 | 1.59e-13 | 72.4 |
| MS.gene007010.t1 | MTR_5g097580 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.21e-12 | 69.7 |
| MS.gene007010.t1 | MTR_5g097580 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.32e-12 | 69.3 |
| MS.gene007010.t1 | MTR_3g101370 | 24.138 | 261 | 157 | 8 | 4 | 247 | 175 | 411 | 1.40e-12 | 68.9 |
| MS.gene007010.t1 | MTR_2g026180 | 22.997 | 287 | 167 | 7 | 17 | 275 | 5 | 265 | 6.13e-12 | 67.4 |
| MS.gene007010.t1 | MTR_3g082650 | 25.146 | 171 | 109 | 4 | 17 | 178 | 19 | 179 | 2.64e-11 | 64.7 |
| MS.gene007010.t1 | MTR_7g118120 | 26.316 | 171 | 113 | 5 | 17 | 184 | 105 | 265 | 3.40e-11 | 65.1 |
| MS.gene007010.t1 | MTR_1g019150 | 28.000 | 275 | 162 | 11 | 7 | 263 | 207 | 463 | 4.04e-11 | 65.1 |
| MS.gene007010.t1 | MTR_3g103420 | 24.339 | 189 | 120 | 3 | 12 | 177 | 6 | 194 | 6.69e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007010.t1 | AT4G03110 | 68.718 | 390 | 95 | 9 | 15 | 392 | 17 | 391 | 0.0 | 514 |
| MS.gene007010.t1 | AT4G03110 | 68.798 | 391 | 94 | 10 | 15 | 392 | 17 | 392 | 0.0 | 512 |
| MS.gene007010.t1 | AT4G03110 | 68.798 | 391 | 94 | 10 | 15 | 392 | 17 | 392 | 0.0 | 512 |
| MS.gene007010.t1 | AT1G03457 | 65.306 | 392 | 109 | 10 | 7 | 392 | 3 | 373 | 1.69e-174 | 493 |
| MS.gene007010.t1 | AT1G03457 | 63.840 | 401 | 109 | 11 | 7 | 392 | 3 | 382 | 5.00e-171 | 485 |
| MS.gene007010.t1 | AT1G03457 | 60.900 | 289 | 86 | 10 | 110 | 392 | 1 | 268 | 1.67e-106 | 317 |
| MS.gene007010.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 114 | 295 | 1.86e-48 | 172 |
| MS.gene007010.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 39 | 220 | 1.66e-47 | 172 |
| MS.gene007010.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 114 | 295 | 2.48e-47 | 172 |
| MS.gene007010.t1 | AT2G47310 | 32.967 | 182 | 112 | 2 | 17 | 189 | 111 | 291 | 3.41e-26 | 110 |
| MS.gene007010.t1 | AT4G34110 | 27.305 | 282 | 171 | 11 | 1 | 263 | 200 | 466 | 2.61e-15 | 78.2 |
| MS.gene007010.t1 | AT4G00830 | 26.901 | 171 | 112 | 5 | 17 | 184 | 117 | 277 | 3.64e-14 | 74.3 |
| MS.gene007010.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 3.88e-14 | 74.3 |
| MS.gene007010.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 3.88e-14 | 74.3 |
| MS.gene007010.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 3.88e-14 | 74.3 |
| MS.gene007010.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.82e-14 | 73.6 |
| MS.gene007010.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.82e-14 | 73.6 |
| MS.gene007010.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.82e-14 | 73.6 |
| MS.gene007010.t1 | AT1G71770 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 2.40e-13 | 72.0 |
| MS.gene007010.t1 | AT1G71770 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 2.40e-13 | 72.0 |
| MS.gene007010.t1 | AT2G18510 | 26.316 | 228 | 155 | 7 | 6 | 227 | 16 | 236 | 2.43e-13 | 71.2 |
| MS.gene007010.t1 | AT3G07810 | 26.316 | 171 | 106 | 4 | 17 | 168 | 7 | 176 | 7.75e-13 | 70.1 |
| MS.gene007010.t1 | AT3G07810 | 26.316 | 171 | 106 | 4 | 17 | 168 | 7 | 176 | 9.94e-13 | 69.7 |
| MS.gene007010.t1 | AT4G00830 | 28.402 | 169 | 104 | 4 | 17 | 184 | 117 | 269 | 1.17e-12 | 69.7 |
| MS.gene007010.t1 | AT4G00830 | 28.402 | 169 | 104 | 4 | 17 | 184 | 117 | 269 | 1.17e-12 | 69.7 |
| MS.gene007010.t1 | AT2G23350 | 26.667 | 345 | 207 | 17 | 1 | 324 | 210 | 529 | 1.34e-11 | 66.6 |
| MS.gene007010.t1 | AT3G13224 | 21.698 | 212 | 131 | 4 | 17 | 220 | 20 | 204 | 1.39e-11 | 65.9 |
| MS.gene007010.t1 | AT5G50250 | 24.324 | 185 | 123 | 4 | 14 | 187 | 111 | 289 | 4.68e-11 | 63.5 |
| MS.gene007010.t1 | AT5G40490 | 26.316 | 171 | 107 | 4 | 17 | 178 | 43 | 203 | 5.17e-11 | 64.3 |
| MS.gene007010.t1 | AT3G13224 | 21.698 | 212 | 131 | 4 | 17 | 220 | 11 | 195 | 7.61e-11 | 63.5 |
| MS.gene007010.t1 | AT1G58470 | 23.077 | 273 | 148 | 9 | 14 | 255 | 4 | 245 | 8.01e-11 | 63.5 |
| MS.gene007010.t1 | AT1G58470 | 23.077 | 273 | 148 | 9 | 14 | 255 | 4 | 245 | 8.01e-11 | 63.5 |
Find 103 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAGCATCCTTCATTATT+TGG | 0.145202 | 7.3:-81602113 | MS.gene007010:CDS |
| TATCACATACCTCAAGAATT+TGG | 0.267175 | 7.3:-81601047 | MS.gene007010:CDS |
| CCTGGTTCTGTTTCACCTTC+CGG | 0.267526 | 7.3:-81601606 | MS.gene007010:CDS |
| TCAACTTCAGAAATGTTCTT+TGG | 0.277981 | 7.3:+81603702 | None:intergenic |
| CTGTGCTTTCTGAGCTCTTC+GGG | 0.289780 | 7.3:+81602163 | None:intergenic |
| CTCCAAGTATGGAACTATAA+AGG | 0.292179 | 7.3:-81603664 | MS.gene007010:CDS |
| AGAACAAGCTCTTGCTGCTT+TGG | 0.295520 | 7.3:-81603468 | MS.gene007010:CDS |
| ACACGCATTAACGGCCTTAT+CGG | 0.303507 | 7.3:+81605012 | None:intergenic |
| GGCTCTTATCCTGCTGTGCC+AGG | 0.318239 | 7.3:-81601690 | MS.gene007010:CDS |
| TAGTTTCTAGGATTCATATT+GGG | 0.327152 | 7.3:+81601738 | None:intergenic |
| GGCAACTCCGCTACATCATC+AGG | 0.339581 | 7.3:-81601576 | MS.gene007010:CDS |
| AGCAGCAAGAGCTTGTTCTT+TGG | 0.340647 | 7.3:+81603472 | None:intergenic |
| GTTCCTCCATATAACGGTTA+TGG | 0.352351 | 7.3:-81602071 | MS.gene007010:CDS |
| TGATAGGCTCCTGGAAGTTA+TGG | 0.362020 | 7.3:-81601864 | MS.gene007010:intron |
| TGATAGCCATAACCGTTATA+TGG | 0.365595 | 7.3:+81602065 | None:intergenic |
| ACCGGTGTTAGCAAATGTTT+TGG | 0.367022 | 7.3:-81600951 | None:intergenic |
| GGAGGCACATGATAGTTTCT+AGG | 0.370299 | 7.3:+81601726 | None:intergenic |
| ATATAACGGTTATGGCTATC+AGG | 0.373888 | 7.3:-81602063 | MS.gene007010:intron |
| GTTTCACCTTCCGGTGGAAA+TGG | 0.379419 | 7.3:-81601597 | MS.gene007010:CDS |
| TTCATATTGGGGCCGAGATC+TGG | 0.379609 | 7.3:+81601750 | None:intergenic |
| GCTAATGCCTTTCAACCATT+TGG | 0.382505 | 7.3:-81601011 | MS.gene007010:CDS |
| CTTATTGTGACACGCATTAA+CGG | 0.390856 | 7.3:+81605003 | None:intergenic |
| ATCCTTTATAGTTCCATACT+TGG | 0.391509 | 7.3:+81603662 | None:intergenic |
| ACTGTGCTTTCTGAGCTCTT+CGG | 0.392609 | 7.3:+81602162 | None:intergenic |
| TCATCTTCCGTCATGTGTTT+CGG | 0.395974 | 7.3:+81605261 | None:intergenic |
| TCAGAACACAAACTCTTCAT+TGG | 0.399593 | 7.3:-81603732 | MS.gene007010:intron |
| GTGTTCCCTTAGTTGTCAAA+TGG | 0.401234 | 7.3:-81602211 | MS.gene007010:CDS |
| ATAGTTTCTAGGATTCATAT+TGG | 0.403096 | 7.3:+81601737 | None:intergenic |
| AATCAATGGAAAGCACAAAA+TGG | 0.410828 | 7.3:-81603441 | MS.gene007010:CDS |
| GATAGGCTCCTGGAAGTTAT+GGG | 0.413886 | 7.3:-81601863 | MS.gene007010:intron |
| TAAGAGCCAACATAACTTGC+AGG | 0.416204 | 7.3:+81601705 | None:intergenic |
| TCACAATAAGAAAACATTAC+CGG | 0.421330 | 7.3:-81604990 | MS.gene007010:CDS |
| GGCATGAGCCCATAACTTCC+AGG | 0.430186 | 7.3:+81601855 | None:intergenic |
| ATTATTTGGAGCCATGCCTA+TGG | 0.433566 | 7.3:-81602099 | MS.gene007010:CDS |
| ACAAGCTCTTGCTGCTTTGG+AGG | 0.434947 | 7.3:-81603465 | MS.gene007010:CDS |
| CCAGGTTGATTCTGCATTGG+TGG | 0.451380 | 7.3:+81601819 | None:intergenic |
| TTATCGGCTTCATCTCTAGA+AGG | 0.468242 | 7.3:+81605028 | None:intergenic |
| ATCAGCCCATTTGACAACTA+AGG | 0.471151 | 7.3:+81602205 | None:intergenic |
| TGTTGTAACCCTGGCACAGC+AGG | 0.473768 | 7.3:+81601681 | None:intergenic |
| GCTGCTTTGGAGGCAATCAA+TGG | 0.477211 | 7.3:-81603455 | MS.gene007010:CDS |
| TTCTAGAGATGAAGCCGATA+AGG | 0.478824 | 7.3:-81605026 | MS.gene007010:CDS |
| GCACTCAAAACTCTACCAAA+TGG | 0.487510 | 7.3:+81600996 | None:intergenic |
| CACAATAAGAAAACATTACC+GGG | 0.488544 | 7.3:-81604989 | MS.gene007010:CDS |
| AATGCATTGCGGCCAGATCT+CGG | 0.489842 | 7.3:-81601762 | MS.gene007010:CDS |
| GGTTATGTTCCTCCATATAA+CGG | 0.491884 | 7.3:-81602077 | MS.gene007010:CDS |
| CAAATGGGCTGATACTGAAA+AGG | 0.494167 | 7.3:-81602195 | MS.gene007010:CDS |
| TGTTCCCTTAGTTGTCAAAT+GGG | 0.495874 | 7.3:-81602210 | MS.gene007010:CDS |
| GTGCCTCCTGCAAGTTATGT+TGG | 0.499189 | 7.3:-81601711 | MS.gene007010:CDS |
| GGAGGACTATTCAAAGGTCT+TGG | 0.500082 | 7.3:+81601627 | None:intergenic |
| GCTCTTATCCTGCTGTGCCA+GGG | 0.508282 | 7.3:-81601689 | MS.gene007010:CDS |
| GGTTGATTCTGCATTGGTGG+CGG | 0.512156 | 7.3:+81601822 | None:intergenic |
| ATGATGCCTCACATGAATCA+AGG | 0.516257 | 7.3:-81601786 | MS.gene007010:CDS |
| CAACATCCAATGGCATATCC+TGG | 0.520136 | 7.3:-81601663 | MS.gene007010:CDS |
| AACTCTACCAAATGGTTGAA+AGG | 0.528070 | 7.3:+81601004 | None:intergenic |
| AGTTTCTAGGATTCATATTG+GGG | 0.528224 | 7.3:+81601739 | None:intergenic |
| AGACCTTTGAATAGTCCTCC+TGG | 0.532938 | 7.3:-81601624 | MS.gene007010:CDS |
| TCTGGTGGTGGTCAAGCTGA+AGG | 0.536580 | 7.3:-81601540 | MS.gene007010:intron |
| GACATTAATGGCGGAAACAA+AGG | 0.537761 | 7.3:-81605337 | None:intergenic |
| AGCGGAGTTGCCATTTCCAC+CGG | 0.538304 | 7.3:+81601587 | None:intergenic |
| GGTTCTCAACAGACAAGTAA+AGG | 0.545378 | 7.3:-81603624 | MS.gene007010:intron |
| TTATTTGGAGCCATGCCTAT+GGG | 0.546418 | 7.3:-81602098 | MS.gene007010:CDS |
| CCACCAATGCAGAATCAACC+TGG | 0.548396 | 7.3:-81601819 | MS.gene007010:CDS |
| ATTGGTGGCGGCATGCGGTA+CGG | 0.551343 | 7.3:+81601834 | None:intergenic |
| TAACCAGGTTGATTCTGCAT+TGG | 0.557945 | 7.3:+81601816 | None:intergenic |
| TCTTGATCTCCAAATTCTTG+AGG | 0.562460 | 7.3:+81601038 | None:intergenic |
| GGCATGGCTCCAAATAATGA+AGG | 0.562854 | 7.3:+81602104 | None:intergenic |
| GAAGTATGCAGATGGCGAGT+TGG | 0.566206 | 7.3:-81603899 | MS.gene007010:CDS |
| TCTGCATACTTCACTTGCAA+TGG | 0.570290 | 7.3:+81603910 | None:intergenic |
| ATTCCTCCAGGATATGCCAT+TGG | 0.572038 | 7.3:+81601657 | None:intergenic |
| ACCAAAACATTTGCTAACAC+CGG | 0.572530 | 7.3:+81600950 | None:intergenic |
| CCGGAAGGTGAAACAGAACC+AGG | 0.575325 | 7.3:+81601606 | None:intergenic |
| GGCATCATATTGTGGTAACC+AGG | 0.578815 | 7.3:+81601801 | None:intergenic |
| GGTTCTGTTTCACCTTCCGG+TGG | 0.581373 | 7.3:-81601603 | MS.gene007010:CDS |
| CTTGGACTAATCATTCCTCC+AGG | 0.583450 | 7.3:+81601645 | None:intergenic |
| GATGGCGAGTTGGAAAGATT+AGG | 0.585947 | 7.3:-81603889 | MS.gene007010:intron |
| TCAGCCCATTTGACAACTAA+GGG | 0.587954 | 7.3:+81602206 | None:intergenic |
| AAAGCTACACGCGCTTCTCG+AGG | 0.592067 | 7.3:-81605180 | MS.gene007010:intron |
| ACAGTCTCAAGCTTCTAATG+TGG | 0.599106 | 7.3:-81602144 | MS.gene007010:CDS |
| GCCAGGGTTACAACATCCAA+TGG | 0.600312 | 7.3:-81601673 | MS.gene007010:CDS |
| CAGTCTCAAGCTTCTAATGT+GGG | 0.603411 | 7.3:-81602143 | MS.gene007010:CDS |
| TAGATAAACAGATTTGCGCC+AGG | 0.605436 | 7.3:+81601068 | None:intergenic |
| GAAAGTGTGAAATTGTTCGT+AGG | 0.610831 | 7.3:-81605291 | MS.gene007010:CDS |
| TCTGCATTGGTGGCGGCATG+CGG | 0.611389 | 7.3:+81601829 | None:intergenic |
| GCCATTGGATGTTGTAACCC+TGG | 0.618480 | 7.3:+81601672 | None:intergenic |
| GCATTTCCTTGATTCATGTG+AGG | 0.618490 | 7.3:+81601780 | None:intergenic |
| TTGCAAGTGAAGTATGCAGA+TGG | 0.626113 | 7.3:-81603907 | MS.gene007010:CDS |
| TATGGAGGAACATAACCCAT+AGG | 0.632075 | 7.3:+81602083 | None:intergenic |
| CAATGGAAAGCACAAAATGG+AGG | 0.634591 | 7.3:-81603438 | MS.gene007010:intron |
| GAACCAGGAGGACTATTCAA+AGG | 0.637034 | 7.3:+81601621 | None:intergenic |
| TCATGTGAGGCATCATATTG+TGG | 0.649926 | 7.3:+81601793 | None:intergenic |
| GAGTTGCCATTTCCACCGGA+AGG | 0.654667 | 7.3:+81601591 | None:intergenic |
| GCAACTCCGCTACATCATCA+GGG | 0.663111 | 7.3:-81601575 | MS.gene007010:CDS |
| GCTGGACCCTGATGATGTAG+CGG | 0.669272 | 7.3:+81601569 | None:intergenic |
| AGGAACATAACCCATAGGCA+TGG | 0.673621 | 7.3:+81602088 | None:intergenic |
| TAGCCATAACCGTTATATGG+AGG | 0.682373 | 7.3:+81602068 | None:intergenic |
| TGAATCAAGGAAATGCATTG+CGG | 0.688594 | 7.3:-81601773 | MS.gene007010:CDS |
| TCAAGTACCGAAACACATGA+CGG | 0.692471 | 7.3:-81605268 | MS.gene007010:CDS |
| ATAAACAGATTTGCGCCAGG+TGG | 0.694236 | 7.3:+81601071 | None:intergenic |
| ACAATAAGAAAACATTACCG+GGG | 0.696985 | 7.3:-81604988 | MS.gene007010:CDS |
| GAGCCAACATAACTTGCAGG+AGG | 0.697782 | 7.3:+81601708 | None:intergenic |
| CAATAAGAAAACATTACCGG+GGG | 0.709469 | 7.3:-81604987 | MS.gene007010:intron |
| CATCCAATGGCATATCCTGG+AGG | 0.717452 | 7.3:-81601660 | MS.gene007010:CDS |
| GAAGGTGAAACAGAACCAGG+AGG | 0.777635 | 7.3:+81601609 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAATTATGTAATTAT+TGG | - | chr7.3:81601896-81601915 | MS.gene007010:intron | 10.0% |
| !! | GTCATATAAATAATTATTAA+CGG | + | chr7.3:81603564-81603583 | None:intergenic | 10.0% |
| !! | TCATATAAATAATTATTAAC+GGG | + | chr7.3:81603563-81603582 | None:intergenic | 10.0% |
| !! | TTAATAATTATTTATATGAC+AGG | - | chr7.3:81603564-81603583 | MS.gene007010:intron | 10.0% |
| !!! | GTAATATAATGTATTTTATA+TGG | - | chr7.3:81602947-81602966 | MS.gene007010:intron | 10.0% |
| !! | AAAAAAAAAACACGAAAATT+AGG | + | chr7.3:81601208-81601227 | None:intergenic | 15.0% |
| !! | AAAAAAAAACACGAAAATTA+GGG | + | chr7.3:81601207-81601226 | None:intergenic | 15.0% |
| !! | AATAATGATACAAAATAATG+TGG | + | chr7.3:81602298-81602317 | None:intergenic | 15.0% |
| !! | ATTTCTATAATTAAGTTTAG+TGG | - | chr7.3:81601927-81601946 | MS.gene007010:intron | 15.0% |
| !! | CATGTTGATATATTTATATT+CGG | - | chr7.3:81604815-81604834 | MS.gene007010:intron | 15.0% |
| !! | CTGATAATAATTTAAGAAAA+TGG | - | chr7.3:81601671-81601690 | MS.gene007010:CDS | 15.0% |
| !! | GGAATAAAATTTAAAAATTC+AGG | + | chr7.3:81602892-81602911 | None:intergenic | 15.0% |
| !! | TAATAATTTAAGAAAATGGA+CGG | - | chr7.3:81601675-81601694 | MS.gene007010:CDS | 15.0% |
| !! | TCATATGAATTGAATAAAAA+CGG | + | chr7.3:81601371-81601390 | None:intergenic | 15.0% |
| !!! | AATTTTAGCAATTTATGTTT+TGG | - | chr7.3:81601493-81601512 | MS.gene007010:intron | 15.0% |
| !!! | ATATTACTATATTTTCACTT+AGG | - | chr7.3:81605187-81605206 | MS.gene007010:CDS | 15.0% |
| !!! | TTATTCCTATTTTTCATTTT+TGG | - | chr7.3:81602905-81602924 | MS.gene007010:intron | 15.0% |
| !! | AAAATTGAAATAACAATTGC+AGG | + | chr7.3:81603454-81603473 | None:intergenic | 20.0% |
| !! | AAATTTAAAAATTCAGGTGA+TGG | + | chr7.3:81602886-81602905 | None:intergenic | 20.0% |
| !! | AATAAGTTAAAGGACTAAAA+AGG | + | chr7.3:81604849-81604868 | None:intergenic | 20.0% |
| !! | AATAATTTAAGAAAATGGAC+GGG | - | chr7.3:81601676-81601695 | MS.gene007010:CDS | 20.0% |
| !! | AGATAATTACTTATGAAAGA+AGG | + | chr7.3:81602517-81602536 | None:intergenic | 20.0% |
| !! | ATTATATTACACAATTAACC+TGG | + | chr7.3:81602937-81602956 | None:intergenic | 20.0% |
| !! | ATTATTATCAGTGTCATATA+TGG | + | chr7.3:81601662-81601681 | None:intergenic | 20.0% |
| !! | ATTCATTCTTTATTCTTTCT+AGG | - | chr7.3:81602699-81602718 | MS.gene007010:intron | 20.0% |
| !! | CATTAGTGACATAATTAAAA+TGG | + | chr7.3:81602124-81602143 | None:intergenic | 20.0% |
| !! | TACTACCAAAAATGAAAAAT+AGG | + | chr7.3:81602913-81602932 | None:intergenic | 20.0% |
| !! | TAGTAATATTTATCGTTGTA+AGG | + | chr7.3:81605176-81605195 | None:intergenic | 20.0% |
| !!! | AAAATGTGATGATTTTTGAA+TGG | + | chr7.3:81604326-81604345 | None:intergenic | 20.0% |
| !!! | AAGGATTTACAAATTTTAAG+AGG | - | chr7.3:81602637-81602656 | MS.gene007010:intron | 20.0% |
| !!! | ATCTCTAAAATGAGTAAATT+TGG | + | chr7.3:81605075-81605094 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTGTTTCTAATTC+AGG | - | chr7.3:81602341-81602360 | MS.gene007010:intron | 20.0% |
| !!! | CATCTTGTATTTAAAATGAT+TGG | + | chr7.3:81603079-81603098 | None:intergenic | 20.0% |
| !!! | GTTACAATTTTAGTTGTAAA+TGG | - | chr7.3:81603332-81603351 | MS.gene007010:intron | 20.0% |
| !!! | TAAAGCCTTAAATACATTTT+TGG | + | chr7.3:81605134-81605153 | None:intergenic | 20.0% |
| !!! | TCATTTTAAATACAAGATGA+AGG | - | chr7.3:81603080-81603099 | MS.gene007010:intron | 20.0% |
| !!! | TTCGTGTTTTTTTTTTTTGT+AGG | - | chr7.3:81601212-81601231 | MS.gene007010:intron | 20.0% |
| ! | AATGATAATAAATGACTTCC+AGG | + | chr7.3:81603949-81603968 | None:intergenic | 25.0% |
| ! | ACTACTATTTAGCAATATAG+TGG | - | chr7.3:81603159-81603178 | MS.gene007010:intron | 25.0% |
| ! | AGTTAACGTAATTCATTCAT+AGG | + | chr7.3:81602076-81602095 | None:intergenic | 25.0% |
| ! | ATAATTTAAGAAAATGGACG+GGG | - | chr7.3:81601677-81601696 | MS.gene007010:CDS | 25.0% |
| ! | ATATTTGTATCACAACTACT+TGG | + | chr7.3:81602177-81602196 | None:intergenic | 25.0% |
| ! | CATTATTCTTCATTCAGATT+GGG | - | chr7.3:81602311-81602330 | MS.gene007010:intron | 25.0% |
| ! | GAACCTCAAAAATAAGTTAA+AGG | + | chr7.3:81604859-81604878 | None:intergenic | 25.0% |
| ! | GCATGTCATTGATATAAAAA+TGG | + | chr7.3:81602495-81602514 | None:intergenic | 25.0% |
| ! | GGAAGTCATTTATTATCATT+TGG | - | chr7.3:81603949-81603968 | MS.gene007010:intron | 25.0% |
| ! | GTTCATCAAAATAACAAACT+TGG | + | chr7.3:81601764-81601783 | None:intergenic | 25.0% |
| ! | GTTTAGGGAAATAGTAATAA+AGG | + | chr7.3:81605018-81605037 | None:intergenic | 25.0% |
| ! | TAATTCATTCATAGGTTACT+TGG | + | chr7.3:81602068-81602087 | None:intergenic | 25.0% |
| ! | TACAACTAAAATTGTAACTG+AGG | + | chr7.3:81603330-81603349 | None:intergenic | 25.0% |
| ! | TAGTAGATTTGAAGAATTAG+CGG | + | chr7.3:81601165-81601184 | None:intergenic | 25.0% |
| ! | TATGAATGAATTACGTTAAC+TGG | - | chr7.3:81602075-81602094 | MS.gene007010:CDS | 25.0% |
| ! | TCAAAATGTTCAATAGTATC+CGG | + | chr7.3:81602210-81602229 | None:intergenic | 25.0% |
| ! | TCACAATAAGAAAACATTAC+CGG | - | chr7.3:81601292-81601311 | MS.gene007010:intron | 25.0% |
| ! | TCATTATTCTTCATTCAGAT+TGG | - | chr7.3:81602310-81602329 | MS.gene007010:intron | 25.0% |
| ! | TCATTCTATACAGAAATAGA+AGG | - | chr7.3:81603005-81603024 | MS.gene007010:intron | 25.0% |
| ! | TCTATAATTAAGTTTAGTGG+CGG | - | chr7.3:81601930-81601949 | MS.gene007010:intron | 25.0% |
| ! | TTATTACTATTTCCCTAAAC+TGG | - | chr7.3:81605018-81605037 | MS.gene007010:CDS | 25.0% |
| !! | GACATTAATTTTCTCTTGAT+AGG | - | chr7.3:81604402-81604421 | MS.gene007010:intron | 25.0% |
| !! | TCTTTATTCTTTCTAGGTTT+TGG | - | chr7.3:81602705-81602724 | MS.gene007010:intron | 25.0% |
| !! | TGCGTTTCATTGAAATTTTT+GGG | - | chr7.3:81602033-81602052 | MS.gene007010:intron | 25.0% |
| !! | TTAGATAGATAACATGCTTT+TGG | - | chr7.3:81603264-81603283 | MS.gene007010:intron | 25.0% |
| !! | TTATGCTGTTTAATTCAATG+TGG | - | chr7.3:81601343-81601362 | MS.gene007010:intron | 25.0% |
| !! | TTGCGTTTCATTGAAATTTT+TGG | - | chr7.3:81602032-81602051 | MS.gene007010:intron | 25.0% |
| !!! | AAGTAAAGGTGCTTATTTTA+CGG | - | chr7.3:81602672-81602691 | MS.gene007010:intron | 25.0% |
| !!! | AGTCCTTTAACTTATTTTTG+AGG | - | chr7.3:81604853-81604872 | MS.gene007010:intron | 25.0% |
| !!! | ATAGACTCATTTTAGAGTTA+AGG | + | chr7.3:81604891-81604910 | None:intergenic | 25.0% |
| !!! | ATAGTTTCTAGGATTCATAT+TGG | + | chr7.3:81604548-81604567 | None:intergenic | 25.0% |
| !!! | CTTATTTTTGAGGTTCAATT+TGG | - | chr7.3:81604863-81604882 | MS.gene007010:intron | 25.0% |
| !!! | TAGACTCATTTTAGAGTTAA+GGG | + | chr7.3:81604890-81604909 | None:intergenic | 25.0% |
| !!! | TAGTTTCTAGGATTCATATT+GGG | + | chr7.3:81604547-81604566 | None:intergenic | 25.0% |
| AAAATTGTAACTGAGGTTGA+AGG | + | chr7.3:81603323-81603342 | None:intergenic | 30.0% | |
| AAATGGTCTTTGCAGTATAT+TGG | - | chr7.3:81603349-81603368 | MS.gene007010:intron | 30.0% | |
| AACCAAAAATGTGAAACACT+AGG | + | chr7.3:81601591-81601610 | None:intergenic | 30.0% | |
| ACAATAAGAAAACATTACCG+GGG | - | chr7.3:81601294-81601313 | MS.gene007010:intron | 30.0% | |
| ACACACATGACAAAATTTGA+CGG | - | chr7.3:81603986-81604005 | MS.gene007010:intron | 30.0% | |
| ACCAAAAATGTGAAACACTA+GGG | + | chr7.3:81601590-81601609 | None:intergenic | 30.0% | |
| AGGGACCAAAAATGTATTTA+AGG | - | chr7.3:81605126-81605145 | MS.gene007010:intron | 30.0% | |
| ATCCTTTATAGTTCCATACT+TGG | + | chr7.3:81602623-81602642 | None:intergenic | 30.0% | |
| ATTCAGTCACAAAATCTTGT+TGG | - | chr7.3:81603385-81603404 | MS.gene007010:intron | 30.0% | |
| ATTGAACAGATAAGGATGAT+TGG | - | chr7.3:81601799-81601818 | MS.gene007010:CDS | 30.0% | |
| CACAATAAGAAAACATTACC+GGG | - | chr7.3:81601293-81601312 | MS.gene007010:intron | 30.0% | |
| GATATATGCTGTCATGTATA+GGG | - | chr7.3:81604043-81604062 | MS.gene007010:intron | 30.0% | |
| GATGCATTATTGAACAGATA+AGG | - | chr7.3:81601791-81601810 | MS.gene007010:CDS | 30.0% | |
| TACAAATATGCCTAAAAAGC+CGG | - | chr7.3:81602188-81602207 | MS.gene007010:CDS | 30.0% | |
| TAGTAATAAAGGCTTAGCTT+TGG | + | chr7.3:81605007-81605026 | None:intergenic | 30.0% | |
| TATCACATACCTCAAGAATT+TGG | - | chr7.3:81605235-81605254 | MS.gene007010:CDS | 30.0% | |
| TCAACTTCAGAAATGTTCTT+TGG | + | chr7.3:81602583-81602602 | None:intergenic | 30.0% | |
| TCACTTGCAATGTTTGATAA+CGG | + | chr7.3:81605052-81605071 | None:intergenic | 30.0% | |
| TGATATATGCTGTCATGTAT+AGG | - | chr7.3:81604042-81604061 | MS.gene007010:intron | 30.0% | |
| TGCAAACACAAGACAAAAAA+AGG | + | chr7.3:81603923-81603942 | None:intergenic | 30.0% | |
| TTCCTTAATCACAATTCACA+AGG | - | chr7.3:81602730-81602749 | MS.gene007010:intron | 30.0% | |
| ! | AATCAATGGAAAGCACAAAA+TGG | - | chr7.3:81602841-81602860 | MS.gene007010:intron | 30.0% |
| ! | AGCATCTGATCAGTAATTTT+GGG | + | chr7.3:81603884-81603903 | None:intergenic | 30.0% |
| ! | AGGGAAAATAATTTGTGCTT+GGG | + | chr7.3:81603842-81603861 | None:intergenic | 30.0% |
| ! | ATTATTAACGGGTAAAACCT+AGG | + | chr7.3:81603552-81603571 | None:intergenic | 30.0% |
| ! | GAACACTATTTTCTTTGACA+AGG | + | chr7.3:81601861-81601880 | None:intergenic | 30.0% |
| ! | TAGCATCTGATCAGTAATTT+TGG | + | chr7.3:81603885-81603904 | None:intergenic | 30.0% |
| !! | AGTTTCTAGGATTCATATTG+GGG | + | chr7.3:81604546-81604565 | None:intergenic | 30.0% |
| !!! | TGGTGCTTATTGCTATTTTT+GGG | - | chr7.3:81601513-81601532 | MS.gene007010:intron | 30.0% |
| !!! | TTGGTGCTTATTGCTATTTT+TGG | - | chr7.3:81601512-81601531 | MS.gene007010:intron | 30.0% |
| AACTCTACCAAATGGTTGAA+AGG | + | chr7.3:81605281-81605300 | None:intergenic | 35.0% | |
| AACTTGATCCAAGTTTGGAA+AGG | - | chr7.3:81603591-81603610 | MS.gene007010:intron | 35.0% | |
| AATGAATTACGTTAACTGGC+AGG | - | chr7.3:81602079-81602098 | MS.gene007010:CDS | 35.0% | |
| ACCAAACCGAACCTTAAATT+AGG | - | chr7.3:81605100-81605119 | MS.gene007010:intron | 35.0% | |
| ACTTGATCCAAGTTTGGAAA+GGG | - | chr7.3:81603592-81603611 | MS.gene007010:intron | 35.0% | |
| AGCCATCCAAAAAGAATAAG+CGG | + | chr7.3:81603051-81603070 | None:intergenic | 35.0% | |
| AGCTGAATAAATCTCAAGAC+TGG | - | chr7.3:81603669-81603688 | MS.gene007010:CDS | 35.0% | |
| AGTGATGAAAGCTATAAGAG+TGG | + | chr7.3:81601543-81601562 | None:intergenic | 35.0% | |
| ATACAGAAATAGAAGGCAAG+TGG | - | chr7.3:81603012-81603031 | MS.gene007010:intron | 35.0% | |
| ATATAACGGTTATGGCTATC+AGG | - | chr7.3:81604219-81604238 | MS.gene007010:intron | 35.0% | |
| ATGTGAAACACTAGGGTATA+TGG | + | chr7.3:81601583-81601602 | None:intergenic | 35.0% | |
| CAAAATGGAAACCTAATGGT+GGG | - | chr7.3:81603486-81603505 | MS.gene007010:CDS | 35.0% | |
| CAATAAGAAAACATTACCGG+GGG | - | chr7.3:81601295-81601314 | MS.gene007010:intron | 35.0% | |
| CGAACCTTAAATTAGGCTAA+GGG | - | chr7.3:81605107-81605126 | MS.gene007010:intron | 35.0% | |
| CTCCAAGTATGGAACTATAA+AGG | - | chr7.3:81602618-81602637 | MS.gene007010:intron | 35.0% | |
| CTTATTGTGACACGCATTAA+CGG | + | chr7.3:81601282-81601301 | None:intergenic | 35.0% | |
| GACATAATTAAAATGGAGCG+TGG | + | chr7.3:81602117-81602136 | None:intergenic | 35.0% | |
| GAGAAGAACTGCATGAATTA+AGG | + | chr7.3:81604289-81604308 | None:intergenic | 35.0% | |
| GCTGAATAAATCTCAAGACT+GGG | - | chr7.3:81603670-81603689 | MS.gene007010:CDS | 35.0% | |
| GGTTATGTTCCTCCATATAA+CGG | - | chr7.3:81604205-81604224 | MS.gene007010:intron | 35.0% | |
| GTCTCAAAATGGAAACCTAA+TGG | - | chr7.3:81603482-81603501 | MS.gene007010:CDS | 35.0% | |
| GTCTTGAGATTTATTCAGCT+CGG | + | chr7.3:81603669-81603688 | None:intergenic | 35.0% | |
| GTGATGAAAGCTATAAGAGT+GGG | + | chr7.3:81601542-81601561 | None:intergenic | 35.0% | |
| TACAGAAATAGAAGGCAAGT+GGG | - | chr7.3:81603013-81603032 | MS.gene007010:intron | 35.0% | |
| TCAAAATGGAAACCTAATGG+TGG | - | chr7.3:81603485-81603504 | MS.gene007010:CDS | 35.0% | |
| TCAGAACACAAACTCTTCAT+TGG | - | chr7.3:81602550-81602569 | MS.gene007010:intron | 35.0% | |
| TCTCAGCATCCTTCATTATT+TGG | - | chr7.3:81604169-81604188 | MS.gene007010:intron | 35.0% | |
| TCTTGAGATTTATTCAGCTC+GGG | + | chr7.3:81603668-81603687 | None:intergenic | 35.0% | |
| TCTTGATCTCCAAATTCTTG+AGG | + | chr7.3:81605247-81605266 | None:intergenic | 35.0% | |
| TGAATCAAGGAAATGCATTG+CGG | - | chr7.3:81604509-81604528 | MS.gene007010:intron | 35.0% | |
| TGATAGCCATAACCGTTATA+TGG | + | chr7.3:81604220-81604239 | None:intergenic | 35.0% | |
| TGTGAAACACTAGGGTATAT+GGG | + | chr7.3:81601582-81601601 | None:intergenic | 35.0% | |
| TGTTCCCTTAGTTGTCAAAT+GGG | - | chr7.3:81604072-81604091 | MS.gene007010:intron | 35.0% | |
| TTATGTCCGTTAACACAAGT+TGG | - | chr7.3:81604924-81604943 | MS.gene007010:intron | 35.0% | |
| TTCTCTTACCATGTTGTAGT+AGG | - | chr7.3:81602764-81602783 | MS.gene007010:intron | 35.0% | |
| TTTGACGACTTGATTATCCA+AGG | - | chr7.3:81602225-81602244 | MS.gene007010:intron | 35.0% | |
| TTTGTATCACAACTACTTGG+AGG | + | chr7.3:81602174-81602193 | None:intergenic | 35.0% | |
| TTTGTATCCCTGTCTCAAAA+TGG | - | chr7.3:81603471-81603490 | MS.gene007010:CDS | 35.0% | |
| ! | AACCGCTTATTCTTTTTGGA+TGG | - | chr7.3:81603046-81603065 | MS.gene007010:intron | 35.0% |
| ! | ACCCTAGTGTTTCACATTTT+TGG | - | chr7.3:81601586-81601605 | MS.gene007010:CDS | 35.0% |
| ! | AGCCTTGTGAATTGTGATTA+AGG | + | chr7.3:81602735-81602754 | None:intergenic | 35.0% |
| ! | CCTTAGCCTAATTTAAGGTT+CGG | + | chr7.3:81605109-81605128 | None:intergenic | 35.0% |
| ! | GAAAGTGTGAAATTGTTCGT+AGG | - | chr7.3:81600991-81601010 | MS.gene007010:CDS | 35.0% |
| ! | GACACAATTGTTGTTACTGT+GGG | - | chr7.3:81601976-81601995 | MS.gene007010:intron | 35.0% |
| ! | GAGGGAAAATAATTTGTGCT+TGG | + | chr7.3:81603843-81603862 | None:intergenic | 35.0% |
| ! | GCACAAATTATTTTCCCTCT+TGG | - | chr7.3:81603844-81603863 | MS.gene007010:intron | 35.0% |
| ! | GTGTTAACGGACATAACTTA+GGG | + | chr7.3:81604920-81604939 | None:intergenic | 35.0% |
| ! | GTTGAACCGCTTATTCTTTT+TGG | - | chr7.3:81603042-81603061 | MS.gene007010:intron | 35.0% |
| ! | GTTTTTGTTGACAAAGCTAC+CGG | - | chr7.3:81605313-81605332 | MS.gene007010:CDS | 35.0% |
| ! | TCAATAGTATCCGGCTTTTT+AGG | + | chr7.3:81602201-81602220 | None:intergenic | 35.0% |
| ! | TGACACAATTGTTGTTACTG+TGG | - | chr7.3:81601975-81601994 | MS.gene007010:intron | 35.0% |
| ! | TGATTTTCCCTTTCCAAACT+TGG | + | chr7.3:81603602-81603621 | None:intergenic | 35.0% |
| ! | TGTGTTAACGGACATAACTT+AGG | + | chr7.3:81604921-81604940 | None:intergenic | 35.0% |
| ! | TGTTAACGGACATAACTTAG+GGG | + | chr7.3:81604919-81604938 | None:intergenic | 35.0% |
| ! | TGTTTAGAACACTGAAGTGT+TGG | - | chr7.3:81602251-81602270 | MS.gene007010:intron | 35.0% |
| !! | TGTATCGTGTTAGTTCTACT+AGG | - | chr7.3:81601733-81601752 | MS.gene007010:CDS | 35.0% |
| !!! | TAGGTTTCCATTTTGAGACA+GGG | + | chr7.3:81603481-81603500 | None:intergenic | 35.0% |
| !!! | TTAGGTTTCCATTTTGAGAC+AGG | + | chr7.3:81603482-81603501 | None:intergenic | 35.0% |
| !!! | TTTCATTTTTGGTAGTAGCC+AGG | - | chr7.3:81602916-81602935 | MS.gene007010:intron | 35.0% |
| AAAATTACTAAACGCACCCC+CGG | + | chr7.3:81601314-81601333 | None:intergenic | 40.0% | |
| ACAAACGCAACTTATCATGC+AGG | + | chr7.3:81602147-81602166 | None:intergenic | 40.0% | |
| ACAGTCTCAAGCTTCTAATG+TGG | - | chr7.3:81604138-81604157 | MS.gene007010:intron | 40.0% | |
| AGAAAATGGACGGGGTTAAA+TGG | - | chr7.3:81601685-81601704 | MS.gene007010:CDS | 40.0% | |
| AGTTGAAACCCTGACTAAGA+TGG | - | chr7.3:81603226-81603245 | MS.gene007010:intron | 40.0% | |
| ATCAGCCCATTTGACAACTA+AGG | + | chr7.3:81604080-81604099 | None:intergenic | 40.0% | |
| ATGATGCCTCACATGAATCA+AGG | - | chr7.3:81604496-81604515 | MS.gene007010:intron | 40.0% | |
| ATGCACAACCTACTACAACA+TGG | + | chr7.3:81602775-81602794 | None:intergenic | 40.0% | |
| CAGTATATTGGACCTTCAAG+CGG | - | chr7.3:81603361-81603380 | MS.gene007010:intron | 40.0% | |
| CAGTCTCAAGCTTCTAATGT+GGG | - | chr7.3:81604139-81604158 | MS.gene007010:intron | 40.0% | |
| CCGAACCTTAAATTAGGCTA+AGG | - | chr7.3:81605106-81605125 | MS.gene007010:intron | 40.0% | |
| GAATTGTGGTCTGGAAAACA+CGG | - | chr7.3:81601952-81601971 | MS.gene007010:intron | 40.0% | |
| GCACTCAAAACTCTACCAAA+TGG | + | chr7.3:81605289-81605308 | None:intergenic | 40.0% | |
| GCATTTCCTTGATTCATGTG+AGG | + | chr7.3:81604505-81604524 | None:intergenic | 40.0% | |
| GCTAATGCCTTTCAACCATT+TGG | - | chr7.3:81605271-81605290 | MS.gene007010:CDS | 40.0% | |
| GGTTCTCAACAGACAAGTAA+AGG | - | chr7.3:81602658-81602677 | MS.gene007010:intron | 40.0% | |
| GTCCTATACAAGCCATTGTA+GGG | + | chr7.3:81603518-81603537 | None:intergenic | 40.0% | |
| GTGAAACACTAGGGTATATG+GGG | + | chr7.3:81601581-81601600 | None:intergenic | 40.0% | |
| GTGTTCCCTTAGTTGTCAAA+TGG | - | chr7.3:81604071-81604090 | MS.gene007010:intron | 40.0% | |
| GTTCCTCCATATAACGGTTA+TGG | - | chr7.3:81604211-81604230 | MS.gene007010:intron | 40.0% | |
| GTTCCTTGTATGTGGTAGAA+TGG | - | chr7.3:81603286-81603305 | MS.gene007010:intron | 40.0% | |
| TAGATAAACAGATTTGCGCC+AGG | + | chr7.3:81605217-81605236 | None:intergenic | 40.0% | |
| TAGCCATAACCGTTATATGG+AGG | + | chr7.3:81604217-81604236 | None:intergenic | 40.0% | |
| TATGGAGGAACATAACCCAT+AGG | + | chr7.3:81604202-81604221 | None:intergenic | 40.0% | |
| TCAGCCCATTTGACAACTAA+GGG | + | chr7.3:81604079-81604098 | None:intergenic | 40.0% | |
| TCATCTTCCGTCATGTGTTT+CGG | + | chr7.3:81601024-81601043 | None:intergenic | 40.0% | |
| TCTCCATTCTACCACATACA+AGG | + | chr7.3:81603292-81603311 | None:intergenic | 40.0% | |
| TCTGCATACTTCACTTGCAA+TGG | + | chr7.3:81602375-81602394 | None:intergenic | 40.0% | |
| TGAAACACTAGGGTATATGG+GGG | + | chr7.3:81601580-81601599 | None:intergenic | 40.0% | |
| TGGTCCCTTAGCCTAATTTA+AGG | + | chr7.3:81605114-81605133 | None:intergenic | 40.0% | |
| TGTCCTATACAAGCCATTGT+AGG | + | chr7.3:81603519-81603538 | None:intergenic | 40.0% | |
| TTGAATGGACGACAGTACTA+TGG | + | chr7.3:81604311-81604330 | None:intergenic | 40.0% | |
| TTGACTGAAACAGTGCACAA+AGG | + | chr7.3:81603717-81603736 | None:intergenic | 40.0% | |
| TTGCAAGTGAAGTATGCAGA+TGG | - | chr7.3:81602375-81602394 | MS.gene007010:intron | 40.0% | |
| ! | ATTATTTGGAGCCATGCCTA+TGG | - | chr7.3:81604183-81604202 | MS.gene007010:intron | 40.0% |
| ! | ATTTTCTCTTGATAGGCTCC+TGG | - | chr7.3:81604409-81604428 | MS.gene007010:intron | 40.0% |
| ! | CAATGGAAAGCACAAAATGG+AGG | - | chr7.3:81602844-81602863 | MS.gene007010:intron | 40.0% |
| ! | CAGTGTTCTAAACAAAGCCT+TGG | + | chr7.3:81602245-81602264 | None:intergenic | 40.0% |
| ! | GCCTAATTTAAGGTTCGGTT+TGG | + | chr7.3:81605104-81605123 | None:intergenic | 40.0% |
| ! | TAAGAGCCAACATAACTTGC+AGG | + | chr7.3:81604580-81604599 | None:intergenic | 40.0% |
| ! | TAAGTTTAGTGGCGGAATTG+TGG | - | chr7.3:81601938-81601957 | MS.gene007010:intron | 40.0% |
| ! | TATTTTCACTTAGGACCACC+TGG | - | chr7.3:81605196-81605215 | MS.gene007010:CDS | 40.0% |
| ! | TCATGTGAGGCATCATATTG+TGG | + | chr7.3:81604492-81604511 | None:intergenic | 40.0% |
| ! | TCTGCACTTTTCTCCAAGTA+TGG | - | chr7.3:81602607-81602626 | MS.gene007010:intron | 40.0% |
| ! | TTATTTGGAGCCATGCCTAT+GGG | - | chr7.3:81604184-81604203 | MS.gene007010:intron | 40.0% |
| ! | TTCCCTACAATGGCTTGTAT+AGG | - | chr7.3:81603513-81603532 | MS.gene007010:intron | 40.0% |
| ! | TTCTAGAGATGAAGCCGATA+AGG | - | chr7.3:81601256-81601275 | MS.gene007010:intron | 40.0% |
| !! | CAAATGGGCTGATACTGAAA+AGG | - | chr7.3:81604087-81604106 | MS.gene007010:intron | 40.0% |
| !! | TAACCAGGTTGATTCTGCAT+TGG | + | chr7.3:81604469-81604488 | None:intergenic | 40.0% |
| !! | TCAAGTACCGAAACACATGA+CGG | - | chr7.3:81601014-81601033 | MS.gene007010:CDS | 40.0% |
| !! | TGAAGACTAGTTTGCCAAGA+GGG | + | chr7.3:81603861-81603880 | None:intergenic | 40.0% |
| !! | TTATCGGCTTCATCTCTAGA+AGG | + | chr7.3:81601257-81601276 | None:intergenic | 40.0% |
| !!! | TGCTTTTGGTTCCTTGTATG+TGG | - | chr7.3:81603278-81603297 | MS.gene007010:intron | 40.0% |
| AAAATGGAGCGTGGCCTATA+TGG | + | chr7.3:81602108-81602127 | None:intergenic | 45.0% | |
| AACGGTGTTTGTGCCAGTTT+AGG | + | chr7.3:81605034-81605053 | None:intergenic | 45.0% | |
| ACGGTGTTTGTGCCAGTTTA+GGG | + | chr7.3:81605033-81605052 | None:intergenic | 45.0% | |
| ACTGTGCTTTCTGAGCTCTT+CGG | + | chr7.3:81604123-81604142 | None:intergenic | 45.0% | |
| AGACCTTTGAATAGTCCTCC+TGG | - | chr7.3:81604658-81604677 | MS.gene007010:intron | 45.0% | |
| AGGAACATAACCCATAGGCA+TGG | + | chr7.3:81604197-81604216 | None:intergenic | 45.0% | |
| ATAAACAGATTTGCGCCAGG+TGG | + | chr7.3:81605214-81605233 | None:intergenic | 45.0% | |
| ATTCCTCCAGGATATGCCAT+TGG | + | chr7.3:81604628-81604647 | None:intergenic | 45.0% | |
| CAACATCCAATGGCATATCC+TGG | - | chr7.3:81604619-81604638 | MS.gene007010:intron | 45.0% | |
| CCTGACTAAGATGGCATGAA+CGG | - | chr7.3:81603235-81603254 | MS.gene007010:intron | 45.0% | |
| CGTTCATGCCATCTTAGTCA+GGG | + | chr7.3:81603237-81603256 | None:intergenic | 45.0% | |
| CTTGGACTAATCATTCCTCC+AGG | + | chr7.3:81604640-81604659 | None:intergenic | 45.0% | |
| GAACCAGGAGGACTATTCAA+AGG | + | chr7.3:81604664-81604683 | None:intergenic | 45.0% | |
| GATAGGCTCCTGGAAGTTAT+GGG | - | chr7.3:81604419-81604438 | MS.gene007010:intron | 45.0% | |
| GCACAAAGGTTTGTGTGCAT+GGG | + | chr7.3:81603703-81603722 | None:intergenic | 45.0% | |
| GCTCGAACTTGATCCAAGTT+TGG | - | chr7.3:81603586-81603605 | MS.gene007010:intron | 45.0% | |
| GGAAAGGGAAAATCAAGCTC+TGG | - | chr7.3:81603607-81603626 | MS.gene007010:intron | 45.0% | |
| GGAGGACTATTCAAAGGTCT+TGG | + | chr7.3:81604658-81604677 | None:intergenic | 45.0% | |
| GGCATCATATTGTGGTAACC+AGG | + | chr7.3:81604484-81604503 | None:intergenic | 45.0% | |
| GGCATGGCTCCAAATAATGA+AGG | + | chr7.3:81604181-81604200 | None:intergenic | 45.0% | |
| TAACTGGCAGGTGTCCATAT+AGG | - | chr7.3:81602091-81602110 | MS.gene007010:CDS | 45.0% | |
| TAGGACATTGTTCCACACCT+AGG | - | chr7.3:81603532-81603551 | MS.gene007010:intron | 45.0% | |
| TAGGGAACAAACCCACCATT+AGG | + | chr7.3:81603500-81603519 | None:intergenic | 45.0% | |
| TCAGGGTCCAGCAAAAATTC+TGG | - | chr7.3:81604724-81604743 | MS.gene007010:intron | 45.0% | |
| TCCAGCAAAAATTCTGGTGG+TGG | - | chr7.3:81604730-81604749 | MS.gene007010:intron | 45.0% | |
| TGATAGGCTCCTGGAAGTTA+TGG | - | chr7.3:81604418-81604437 | MS.gene007010:intron | 45.0% | |
| TGCACAAAGGTTTGTGTGCA+TGG | + | chr7.3:81603704-81603723 | None:intergenic | 45.0% | |
| TGTCTTGTGTTTGCATGACC+TGG | - | chr7.3:81603928-81603947 | MS.gene007010:intron | 45.0% | |
| ! | ACACGCATTAACGGCCTTAT+CGG | + | chr7.3:81601273-81601292 | None:intergenic | 45.0% |
| ! | ACCACCACCAGAATTTTTGC+TGG | + | chr7.3:81604734-81604753 | None:intergenic | 45.0% |
| ! | AGAACAAGCTCTTGCTGCTT+TGG | - | chr7.3:81602814-81602833 | MS.gene007010:intron | 45.0% |
| ! | AGCAGCAAGAGCTTGTTCTT+TGG | + | chr7.3:81602813-81602832 | None:intergenic | 45.0% |
| ! | GATGGCGAGTTGGAAAGATT+AGG | - | chr7.3:81602393-81602412 | MS.gene007010:intron | 45.0% |
| ! | GGAAAGCACAAAATGGAGGT+TGG | - | chr7.3:81602848-81602867 | MS.gene007010:intron | 45.0% |
| ! | GGAGGCACATGATAGTTTCT+AGG | + | chr7.3:81604559-81604578 | None:intergenic | 45.0% |
| ! | TAACGGGTAAAACCTAGGTG+TGG | + | chr7.3:81603547-81603566 | None:intergenic | 45.0% |
| !! | CGTGTTAGTTCTACTAGGCT+GGG | - | chr7.3:81601738-81601757 | MS.gene007010:CDS | 45.0% |
| !! | GCTGTTAACTAGTGCTGATG+TGG | - | chr7.3:81604970-81604989 | MS.gene007010:intron | 45.0% |
| !! | GTGAAGACTAGTTTGCCAAG+AGG | + | chr7.3:81603862-81603881 | None:intergenic | 45.0% |
| !! | TCGTGTTAGTTCTACTAGGC+TGG | - | chr7.3:81601737-81601756 | MS.gene007010:CDS | 45.0% |
| AATGCATTGCGGCCAGATCT+CGG | - | chr7.3:81604520-81604539 | MS.gene007010:intron | 50.0% | |
| ATAGAAGGCAAGTGGGCAAC+AGG | - | chr7.3:81603020-81603039 | MS.gene007010:intron | 50.0% | |
| CATCCAATGGCATATCCTGG+AGG | - | chr7.3:81604622-81604641 | MS.gene007010:intron | 50.0% | |
| CCACCAATGCAGAATCAACC+TGG | - | chr7.3:81604463-81604482 | MS.gene007010:intron | 50.0% | |
| CCGTTCATGCCATCTTAGTC+AGG | + | chr7.3:81603238-81603257 | None:intergenic | 50.0% | |
| CTGTGCTTTCTGAGCTCTTC+GGG | + | chr7.3:81604122-81604141 | None:intergenic | 50.0% | |
| GAAGGTGAAACAGAACCAGG+AGG | + | chr7.3:81604676-81604695 | None:intergenic | 50.0% | |
| GAAGTATGCAGATGGCGAGT+TGG | - | chr7.3:81602383-81602402 | MS.gene007010:intron | 50.0% | |
| GCAACTCCGCTACATCATCA+GGG | - | chr7.3:81604707-81604726 | MS.gene007010:intron | 50.0% | |
| GCCAGGGTTACAACATCCAA+TGG | - | chr7.3:81604609-81604628 | MS.gene007010:intron | 50.0% | |
| GCCATTGGATGTTGTAACCC+TGG | + | chr7.3:81604613-81604632 | None:intergenic | 50.0% | |
| GGGTCCAGCAAAAATTCTGG+TGG | - | chr7.3:81604727-81604746 | MS.gene007010:intron | 50.0% | |
| GTGCCTCCTGCAAGTTATGT+TGG | - | chr7.3:81604571-81604590 | MS.gene007010:intron | 50.0% | |
| GTTTCACCTTCCGGTGGAAA+TGG | - | chr7.3:81604685-81604704 | MS.gene007010:intron | 50.0% | |
| TTCATATTGGGGCCGAGATC+TGG | + | chr7.3:81604535-81604554 | None:intergenic | 50.0% | |
| ! | GAGCCAACATAACTTGCAGG+AGG | + | chr7.3:81604577-81604596 | None:intergenic | 50.0% |
| ! | GGTGGGTTTGTTCCCTACAA+TGG | - | chr7.3:81603503-81603522 | MS.gene007010:intron | 50.0% |
| ! | GGTTGATTCTGCATTGGTGG+CGG | + | chr7.3:81604463-81604482 | None:intergenic | 50.0% |
| ! | TGTGACTGAATGCCGCTTGA+AGG | + | chr7.3:81603376-81603395 | None:intergenic | 50.0% |
| ! | TTAGTGGCGGAATTGTGGTC+TGG | - | chr7.3:81601943-81601962 | MS.gene007010:intron | 50.0% |
| !! | ACAAGCTCTTGCTGCTTTGG+AGG | - | chr7.3:81602817-81602836 | MS.gene007010:intron | 50.0% |
| !! | CCAGGTTGATTCTGCATTGG+TGG | + | chr7.3:81604466-81604485 | None:intergenic | 50.0% |
| !! | CCTGGTTCTGTTTCACCTTC+CGG | - | chr7.3:81604676-81604695 | MS.gene007010:intron | 50.0% |
| !! | GCTGCTTTGGAGGCAATCAA+TGG | - | chr7.3:81602827-81602846 | MS.gene007010:intron | 50.0% |
| AAAGCTACACGCGCTTCTCG+AGG | - | chr7.3:81601102-81601121 | MS.gene007010:intron | 55.0% | |
| CCGGAAGGTGAAACAGAACC+AGG | + | chr7.3:81604679-81604698 | None:intergenic | 55.0% | |
| GCTCTTATCCTGCTGTGCCA+GGG | - | chr7.3:81604593-81604612 | MS.gene007010:intron | 55.0% | |
| GGCAACTCCGCTACATCATC+AGG | - | chr7.3:81604706-81604725 | MS.gene007010:intron | 55.0% | |
| GGCATGAGCCCATAACTTCC+AGG | + | chr7.3:81604430-81604449 | None:intergenic | 55.0% | |
| GGTTCTGTTTCACCTTCCGG+TGG | - | chr7.3:81604679-81604698 | MS.gene007010:intron | 55.0% | |
| TGTTGTAACCCTGGCACAGC+AGG | + | chr7.3:81604604-81604623 | None:intergenic | 55.0% | |
| ! | AGCGGAGTTGCCATTTCCAC+CGG | + | chr7.3:81604698-81604717 | None:intergenic | 55.0% |
| ! | GAGTTGCCATTTCCACCGGA+AGG | + | chr7.3:81604694-81604713 | None:intergenic | 55.0% |
| ! | GCTGGACCCTGATGATGTAG+CGG | + | chr7.3:81604716-81604735 | None:intergenic | 55.0% |
| !! | TCTGGTGGTGGTCAAGCTGA+AGG | - | chr7.3:81604742-81604761 | MS.gene007010:intron | 55.0% |
| GGCTCTTATCCTGCTGTGCC+AGG | - | chr7.3:81604592-81604611 | MS.gene007010:intron | 60.0% | |
| !! | ATTGGTGGCGGCATGCGGTA+CGG | + | chr7.3:81604451-81604470 | None:intergenic | 60.0% |
| !! | TCTGCATTGGTGGCGGCATG+CGG | + | chr7.3:81604456-81604475 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 81600952 | 81605352 | 81600952 | ID=MS.gene007010 |
| chr7.3 | mRNA | 81600952 | 81605352 | 81600952 | ID=MS.gene007010.t1;Parent=MS.gene007010 |
| chr7.3 | exon | 81605181 | 81605352 | 81605181 | ID=MS.gene007010.t1.exon1;Parent=MS.gene007010.t1 |
| chr7.3 | CDS | 81605181 | 81605352 | 81605181 | ID=cds.MS.gene007010.t1;Parent=MS.gene007010.t1 |
| chr7.3 | exon | 81604988 | 81605070 | 81604988 | ID=MS.gene007010.t1.exon2;Parent=MS.gene007010.t1 |
| chr7.3 | CDS | 81604988 | 81605070 | 81604988 | ID=cds.MS.gene007010.t1;Parent=MS.gene007010.t1 |
| chr7.3 | exon | 81603890 | 81603941 | 81603890 | ID=MS.gene007010.t1.exon3;Parent=MS.gene007010.t1 |
| chr7.3 | CDS | 81603890 | 81603941 | 81603890 | ID=cds.MS.gene007010.t1;Parent=MS.gene007010.t1 |
| chr7.3 | exon | 81603625 | 81603750 | 81603625 | ID=MS.gene007010.t1.exon4;Parent=MS.gene007010.t1 |
| chr7.3 | CDS | 81603625 | 81603750 | 81603625 | ID=cds.MS.gene007010.t1;Parent=MS.gene007010.t1 |
| chr7.3 | exon | 81603439 | 81603521 | 81603439 | ID=MS.gene007010.t1.exon5;Parent=MS.gene007010.t1 |
| chr7.3 | CDS | 81603439 | 81603521 | 81603439 | ID=cds.MS.gene007010.t1;Parent=MS.gene007010.t1 |
| chr7.3 | exon | 81602064 | 81602240 | 81602064 | ID=MS.gene007010.t1.exon6;Parent=MS.gene007010.t1 |
| chr7.3 | CDS | 81602064 | 81602240 | 81602064 | ID=cds.MS.gene007010.t1;Parent=MS.gene007010.t1 |
| chr7.3 | exon | 81601541 | 81601880 | 81601541 | ID=MS.gene007010.t1.exon7;Parent=MS.gene007010.t1 |
| chr7.3 | CDS | 81601541 | 81601880 | 81601541 | ID=cds.MS.gene007010.t1;Parent=MS.gene007010.t1 |
| chr7.3 | exon | 81600952 | 81601095 | 81600952 | ID=MS.gene007010.t1.exon8;Parent=MS.gene007010.t1 |
| chr7.3 | CDS | 81600952 | 81601095 | 81600952 | ID=cds.MS.gene007010.t1;Parent=MS.gene007010.t1 |
| Gene Sequence |
| Protein sequence |
