Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022650.t1 | XP_003615307.2 | 99.3 | 445 | 3 | 0 | 1 | 445 | 1 | 445 | 1.00E-250 | 875.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022650.t1 | Q84M92 | 75.5 | 445 | 105 | 2 | 1 | 445 | 1 | 441 | 3.2e-197 | 689.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022650.t1 | G7KBM8 | 99.3 | 445 | 3 | 0 | 1 | 445 | 1 | 445 | 7.3e-251 | 875.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022650.t1 | MTR_5g066400 | 99.326 | 445 | 3 | 0 | 1 | 445 | 1 | 445 | 0.0 | 914 |
MS.gene022650.t1 | MTR_8g464900 | 99.070 | 430 | 3 | 1 | 1 | 430 | 1 | 429 | 0.0 | 874 |
MS.gene022650.t1 | MTR_5g066400 | 93.034 | 445 | 3 | 1 | 1 | 445 | 1 | 417 | 0.0 | 840 |
MS.gene022650.t1 | MTR_5g066400 | 98.992 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 0.0 | 806 |
MS.gene022650.t1 | MTR_8g007440 | 83.908 | 261 | 16 | 3 | 127 | 386 | 33 | 268 | 6.73e-151 | 429 |
MS.gene022650.t1 | MTR_0015s0130 | 38.031 | 447 | 203 | 12 | 1 | 444 | 1 | 376 | 2.76e-93 | 286 |
MS.gene022650.t1 | MTR_2g096840 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 7.69e-93 | 285 |
MS.gene022650.t1 | MTR_6g004000 | 37.584 | 447 | 205 | 12 | 1 | 444 | 1 | 376 | 4.61e-92 | 283 |
MS.gene022650.t1 | MTR_7g093260 | 37.136 | 447 | 207 | 12 | 1 | 444 | 1 | 376 | 4.17e-91 | 281 |
MS.gene022650.t1 | MTR_3g095530 | 37.360 | 447 | 206 | 12 | 1 | 444 | 1 | 376 | 1.71e-90 | 280 |
MS.gene022650.t1 | MTR_7g026230 | 37.360 | 447 | 206 | 12 | 1 | 444 | 1 | 376 | 1.91e-90 | 279 |
MS.gene022650.t1 | MTR_2g008050 | 36.465 | 447 | 210 | 12 | 1 | 444 | 1 | 376 | 1.17e-89 | 277 |
MS.gene022650.t1 | MTR_7g027185 | 28.160 | 451 | 244 | 9 | 5 | 442 | 2 | 385 | 2.14e-52 | 181 |
MS.gene022650.t1 | MTR_7g027185 | 28.571 | 427 | 226 | 8 | 5 | 419 | 2 | 361 | 7.12e-50 | 173 |
MS.gene022650.t1 | MTR_8g089630 | 29.247 | 465 | 250 | 15 | 9 | 445 | 9 | 422 | 4.73e-46 | 165 |
MS.gene022650.t1 | MTR_7g027185 | 29.288 | 379 | 197 | 7 | 5 | 379 | 2 | 313 | 1.29e-45 | 160 |
MS.gene022650.t1 | MTR_3g030550 | 26.185 | 443 | 241 | 11 | 7 | 444 | 1 | 362 | 2.03e-35 | 135 |
MS.gene022650.t1 | MTR_2g445210 | 23.729 | 472 | 278 | 12 | 9 | 442 | 7 | 434 | 1.87e-27 | 114 |
MS.gene022650.t1 | MTR_8g007445 | 66.250 | 80 | 25 | 1 | 1 | 80 | 1 | 78 | 6.13e-25 | 98.2 |
MS.gene022650.t1 | MTR_8g008540 | 74.138 | 58 | 10 | 1 | 393 | 445 | 21 | 78 | 1.12e-20 | 86.3 |
MS.gene022650.t1 | MTR_5g066390 | 76.923 | 52 | 11 | 1 | 1 | 51 | 1 | 52 | 2.80e-15 | 75.1 |
MS.gene022650.t1 | MTR_3g067945 | 26.891 | 238 | 143 | 7 | 7 | 238 | 19 | 231 | 6.06e-13 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022650.t1 | AT1G18450 | 78.125 | 448 | 88 | 4 | 1 | 445 | 1 | 441 | 0.0 | 747 |
MS.gene022650.t1 | AT3G53750 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 1.63e-93 | 287 |
MS.gene022650.t1 | AT3G53750 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 1.63e-93 | 287 |
MS.gene022650.t1 | AT2G37620 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 1.63e-93 | 287 |
MS.gene022650.t1 | AT2G37620 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 1.63e-93 | 287 |
MS.gene022650.t1 | AT2G37620 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 1.63e-93 | 287 |
MS.gene022650.t1 | AT2G37620 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 1.63e-93 | 287 |
MS.gene022650.t1 | AT3G12110 | 38.031 | 447 | 203 | 12 | 1 | 444 | 1 | 376 | 5.01e-93 | 286 |
MS.gene022650.t1 | AT5G09810 | 38.255 | 447 | 202 | 12 | 1 | 444 | 1 | 376 | 1.23e-92 | 285 |
MS.gene022650.t1 | AT1G49240 | 37.808 | 447 | 204 | 10 | 1 | 444 | 1 | 376 | 4.88e-92 | 283 |
MS.gene022650.t1 | AT3G18780 | 37.808 | 447 | 204 | 10 | 1 | 444 | 1 | 376 | 7.44e-92 | 283 |
MS.gene022650.t1 | AT3G18780 | 37.808 | 447 | 204 | 10 | 1 | 444 | 1 | 376 | 7.44e-92 | 283 |
MS.gene022650.t1 | AT3G46520 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 1.80e-91 | 282 |
MS.gene022650.t1 | AT3G46520 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 1.80e-91 | 282 |
MS.gene022650.t1 | AT5G59370 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 2.12e-91 | 282 |
MS.gene022650.t1 | AT5G59370 | 37.360 | 447 | 206 | 11 | 1 | 444 | 1 | 376 | 2.12e-91 | 282 |
MS.gene022650.t1 | AT2G42100 | 35.586 | 444 | 212 | 9 | 4 | 444 | 5 | 377 | 4.10e-88 | 273 |
MS.gene022650.t1 | AT3G18780 | 36.916 | 428 | 196 | 10 | 1 | 425 | 1 | 357 | 1.62e-81 | 256 |
MS.gene022650.t1 | AT2G42090 | 34.624 | 439 | 206 | 9 | 10 | 444 | 4 | 365 | 9.64e-80 | 251 |
MS.gene022650.t1 | AT2G42170 | 34.877 | 367 | 192 | 8 | 78 | 444 | 9 | 328 | 1.40e-71 | 229 |
MS.gene022650.t1 | AT2G42170 | 34.877 | 367 | 192 | 8 | 78 | 444 | 9 | 328 | 1.40e-71 | 229 |
MS.gene022650.t1 | AT1G73910 | 67.105 | 152 | 40 | 2 | 1 | 152 | 1 | 142 | 9.39e-66 | 207 |
MS.gene022650.t1 | AT1G73910 | 67.105 | 152 | 40 | 2 | 1 | 152 | 1 | 142 | 9.39e-66 | 207 |
MS.gene022650.t1 | AT2G42170 | 33.908 | 348 | 183 | 8 | 78 | 425 | 9 | 309 | 1.88e-61 | 202 |
MS.gene022650.t1 | AT2G42170 | 33.908 | 348 | 183 | 8 | 78 | 425 | 9 | 309 | 1.88e-61 | 202 |
MS.gene022650.t1 | AT3G27000 | 28.761 | 452 | 240 | 10 | 5 | 442 | 2 | 385 | 6.03e-53 | 182 |
MS.gene022650.t1 | AT1G73910 | 68.376 | 117 | 28 | 1 | 1 | 117 | 1 | 108 | 1.11e-48 | 164 |
MS.gene022650.t1 | AT2G42170 | 34.717 | 265 | 128 | 6 | 180 | 444 | 11 | 230 | 7.46e-45 | 156 |
MS.gene022650.t1 | AT1G13180 | 27.826 | 460 | 250 | 13 | 9 | 438 | 8 | 415 | 4.07e-43 | 157 |
MS.gene022650.t1 | AT3G60830 | 25.336 | 446 | 241 | 10 | 7 | 444 | 1 | 362 | 2.04e-31 | 124 |
MS.gene022650.t1 | AT3G33520 | 26.166 | 386 | 221 | 8 | 94 | 443 | 61 | 418 | 1.64e-25 | 108 |
MS.gene022650.t1 | AT3G12380 | 27.660 | 235 | 139 | 6 | 10 | 238 | 22 | 231 | 1.55e-15 | 79.7 |
MS.gene022650.t1 | AT3G12380 | 28.085 | 235 | 144 | 6 | 10 | 238 | 22 | 237 | 1.88e-14 | 76.3 |
Find 118 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGCAATACCCTTGCTTTCC+AGG | 0.219314 | 8.4:+79139866 | None:intergenic |
AATACGCCCTGGAGAGTTTC+AGG | 0.253290 | 8.4:-79139711 | MS.gene022650:intron |
GCATTTCACTTTCAGCTTGC+TGG | 0.254209 | 8.4:-79135494 | MS.gene022650:intron |
TATCACAGGACAATTGAAAT+TGG | 0.257174 | 8.4:-79137685 | MS.gene022650:intron |
GGGATATTGTTGACAGCATT+TGG | 0.259925 | 8.4:-79145286 | MS.gene022650:CDS |
GCAACAATTCCATCCTTTAA+TGG | 0.263838 | 8.4:+79145314 | None:intergenic |
TTGTAGCTTTCAGATGTATT+AGG | 0.285708 | 8.4:+79138403 | None:intergenic |
ATGTAAATTGCAGTCAATTC+CGG | 0.286149 | 8.4:-79136460 | MS.gene022650:intron |
TCAGGTGGTGTCTCCATTAA+AGG | 0.291568 | 8.4:-79145327 | MS.gene022650:intron |
TCAAGGTAATTACTCGGATT+TGG | 0.294188 | 8.4:+79133174 | None:intergenic |
AGGAGCATGGGATGCTCTTT+AGG | 0.302704 | 8.4:+79142756 | None:intergenic |
TGAAACCTCGGTATTCCTTT+AGG | 0.316799 | 8.4:-79139742 | MS.gene022650:CDS |
AAACCATCATATGGAGTATC+TGG | 0.319612 | 8.4:+79138254 | None:intergenic |
TTCAGCTATAGTAATTGATC+TGG | 0.360082 | 8.4:-79146642 | MS.gene022650:CDS |
CCACATCATTAGTTGTTGAT+TGG | 0.366348 | 8.4:-79142416 | MS.gene022650:intron |
ATGCTACTGAAAGGAGGTTT+AGG | 0.372848 | 8.4:-79134060 | MS.gene022650:intron |
GCATTTGGGATCATGCCTTC+AGG | 0.378731 | 8.4:-79145271 | MS.gene022650:intron |
TGTAAATTGCAGTCAATTCC+GGG | 0.387922 | 8.4:-79136459 | MS.gene022650:intron |
AACAATATTAGAAATGTTGA+TGG | 0.388533 | 8.4:-79145519 | MS.gene022650:CDS |
TTCAATTATCTTACCATTTG+AGG | 0.388965 | 8.4:+79136393 | None:intergenic |
CAACTCAAGGACACTTCCTT+TGG | 0.395475 | 8.4:+79133005 | None:intergenic |
GGCAGTATATTGGCTTCCCT+TGG | 0.405681 | 8.4:-79133220 | MS.gene022650:CDS |
GGATATTGTTGACAGCATTT+GGG | 0.407969 | 8.4:-79145285 | MS.gene022650:CDS |
GATGGATTGAAAAGAACATC+TGG | 0.409238 | 8.4:+79137643 | None:intergenic |
GTAAGAAATTCTCCTCCAAT+TGG | 0.412742 | 8.4:+79139907 | None:intergenic |
GCTCTTTAGGATCAATCAAT+AGG | 0.412944 | 8.4:+79142769 | None:intergenic |
AGAATTATTTAGTAGCATAC+TGG | 0.414090 | 8.4:-79136018 | MS.gene022650:intron |
TTTCAATCCATCCCTGGCTC+AGG | 0.414421 | 8.4:-79137632 | MS.gene022650:intron |
TACAGAAGGAAACACAGCTT+TGG | 0.420996 | 8.4:+79146577 | None:intergenic |
GCGTATTTCCTTTCTCCTAA+AGG | 0.428130 | 8.4:+79139727 | None:intergenic |
TCGGTATTCCTTTAGGAGAA+AGG | 0.431364 | 8.4:-79139735 | MS.gene022650:CDS |
ATTTGGAGAACCACATTTGT+TGG | 0.435174 | 8.4:+79133191 | None:intergenic |
CTGGATTGGAGGCAGTATAT+TGG | 0.435714 | 8.4:-79133230 | MS.gene022650:CDS |
ACAGAAGGAAACACAGCTTT+GGG | 0.447748 | 8.4:+79146578 | None:intergenic |
CTTTCAGCTTGCTGGTGGTA+CGG | 0.449113 | 8.4:-79135486 | MS.gene022650:intron |
TCTGCAACTTACTGGCCATC+AGG | 0.458733 | 8.4:+79137874 | None:intergenic |
CTCATGTGAACTTAGGTTGT+TGG | 0.462020 | 8.4:-79145612 | MS.gene022650:intron |
AGTTCGTGGGCTGCCTCAAA+TGG | 0.472905 | 8.4:-79136406 | MS.gene022650:intron |
AGATTGCTTGATGAAAAGCC+TGG | 0.475639 | 8.4:-79139884 | MS.gene022650:CDS |
TCAGCTCACAAACCTGAGCC+AGG | 0.478987 | 8.4:+79137620 | None:intergenic |
ATATGTAGGATCTCAGTCCT+TGG | 0.480592 | 8.4:-79145469 | MS.gene022650:CDS |
GCTGTGGCAACGTCTCCAAT+TGG | 0.487799 | 8.4:-79139922 | MS.gene022650:CDS |
ATTGGCAGTGTCTGGATTGG+AGG | 0.490582 | 8.4:-79133241 | MS.gene022650:intron |
CAGGTATACAAACCATCATA+TGG | 0.490698 | 8.4:+79138245 | None:intergenic |
TATGTAGGATCTCAGTCCTT+GGG | 0.498104 | 8.4:-79145468 | MS.gene022650:CDS |
TGTTGGAGCGATTGATCAAA+TGG | 0.503546 | 8.4:-79145595 | MS.gene022650:CDS |
ATTCCATTGCTCAGTGGTGG+AGG | 0.503728 | 8.4:-79141202 | MS.gene022650:intron |
TCTGCAAAGCTCTCCATGCC+CGG | 0.508842 | 8.4:+79136441 | None:intergenic |
GCTGAAAAGAACTCTGGCTC+TGG | 0.511526 | 8.4:-79145552 | MS.gene022650:CDS |
GGCTGCTAGAGTAAAGGTAT+TGG | 0.511652 | 8.4:-79134092 | MS.gene022650:CDS |
CCCTCAGGCTGCTAGAGTAA+AGG | 0.514929 | 8.4:-79134098 | MS.gene022650:CDS |
GTAGCTCATACGATGTCGTT+GGG | 0.515121 | 8.4:+79137896 | None:intergenic |
GGTGATTGCTAGTGATATCA+AGG | 0.517057 | 8.4:-79138294 | MS.gene022650:CDS |
GGTTCACATACTTGTAAAGC+TGG | 0.517258 | 8.4:-79146620 | MS.gene022650:CDS |
TTTATTGGCAGTGTCTGGAT+TGG | 0.519842 | 8.4:-79133244 | MS.gene022650:intron |
CATAATACCTGAAACTCTCC+AGG | 0.520117 | 8.4:+79139704 | None:intergenic |
TGTTGTTGAGCATTAGAAGA+AGG | 0.520384 | 8.4:+79142726 | None:intergenic |
AGGATGGAATTGTTGCTGAC+TGG | 0.520781 | 8.4:-79145307 | MS.gene022650:CDS |
GGATGGAATTGTTGCTGACT+GGG | 0.521437 | 8.4:-79145306 | MS.gene022650:CDS |
ACTTGTAAAGCTGGTTATGC+TGG | 0.525919 | 8.4:-79146611 | MS.gene022650:CDS |
AGGAGAAAGGAAATACGCCC+TGG | 0.526266 | 8.4:-79139722 | MS.gene022650:CDS |
ATTGCAGTCAATTCCGGGCA+TGG | 0.526476 | 8.4:-79136454 | MS.gene022650:intron |
GGAAAGAGAAAATTATATGT+AGG | 0.529853 | 8.4:-79145483 | MS.gene022650:CDS |
TTGGTTCCTTCCAACAAATG+TGG | 0.534619 | 8.4:-79133201 | MS.gene022650:CDS |
AGAAGGCTCTGCAAGGAGCA+TGG | 0.535506 | 8.4:+79142743 | None:intergenic |
TGAGGCAGCCCACGAACTGA+TGG | 0.537968 | 8.4:+79136411 | None:intergenic |
GATGAAAAGCCTGGAAAGCA+AGG | 0.538696 | 8.4:-79139875 | MS.gene022650:CDS |
GAAGGCTCTGCAAGGAGCAT+GGG | 0.539240 | 8.4:+79142744 | None:intergenic |
TTTCACTTTCAGCTTGCTGG+TGG | 0.540017 | 8.4:-79135491 | MS.gene022650:intron |
TCAGCTATAGTAATTGATCT+GGG | 0.540950 | 8.4:-79146641 | MS.gene022650:CDS |
GGAGAACCACATTTGTTGGA+AGG | 0.543183 | 8.4:+79133195 | None:intergenic |
GGCTTCAATGCAACAACTGA+AGG | 0.545651 | 8.4:-79135465 | MS.gene022650:CDS |
TCTGATGCAGGAATCCCCTC+AGG | 0.547564 | 8.4:-79134113 | MS.gene022650:intron |
GCTCCAGATACTCCATATGA+TGG | 0.547700 | 8.4:-79138257 | MS.gene022650:intron |
GGTAGCTCATACGATGTCGT+TGG | 0.549228 | 8.4:+79137895 | None:intergenic |
CCTTTCAGTAGCATTTCCAC+TGG | 0.562878 | 8.4:+79134069 | None:intergenic |
GAAATCGCTCCATCAGTTCG+TGG | 0.564376 | 8.4:-79136420 | MS.gene022650:CDS |
GTGGCAACGTCTCCAATTGG+AGG | 0.567917 | 8.4:-79139919 | MS.gene022650:CDS |
TCTAATAGATATGAAGAGCA+TGG | 0.569376 | 8.4:-79133040 | MS.gene022650:intron |
CCAATCAACAACTAATGATG+TGG | 0.572658 | 8.4:+79142416 | None:intergenic |
AATCTGACAGACTGTAGACT+TGG | 0.573313 | 8.4:-79138431 | MS.gene022650:intron |
GACGAGGCTGAAAAGAACTC+TGG | 0.578930 | 8.4:-79145558 | MS.gene022650:CDS |
TGTTGATGGTGATAAAGCCA+AGG | 0.582436 | 8.4:-79145505 | MS.gene022650:CDS |
TGATGGCTATGTTCTTCAGA+AGG | 0.588188 | 8.4:-79141155 | MS.gene022650:intron |
TTACCTCCATAAAATCTCTA+CGG | 0.588637 | 8.4:+79145442 | None:intergenic |
AGAACATAGCCATCATGTAC+CGG | 0.593299 | 8.4:+79141163 | None:intergenic |
CCTTTACTCTAGCAGCCTGA+GGG | 0.593502 | 8.4:+79134098 | None:intergenic |
ACATTTGTTGGAAGGAACCA+AGG | 0.602188 | 8.4:+79133203 | None:intergenic |
ACAGTTGCACCGGTACATGA+TGG | 0.606325 | 8.4:-79141172 | MS.gene022650:CDS |
AAGCTACAAGCTCTACTCCC+AGG | 0.608537 | 8.4:-79138389 | MS.gene022650:intron |
ACCTTTACTCTAGCAGCCTG+AGG | 0.611663 | 8.4:+79134097 | None:intergenic |
CCTGGAAAGCAAGGGTATTG+CGG | 0.612507 | 8.4:-79139866 | MS.gene022650:intron |
AAATCGCTCCATCAGTTCGT+GGG | 0.616076 | 8.4:-79136419 | MS.gene022650:CDS |
AGTGCCGTTGCAACTATGTA+CGG | 0.619334 | 8.4:-79146766 | None:intergenic |
AGGATCAACTACAGTTGCAC+CGG | 0.623628 | 8.4:-79141182 | MS.gene022650:CDS |
GTTGATGGTGATAAAGCCAA+GGG | 0.625274 | 8.4:-79145504 | MS.gene022650:CDS |
ATGAAAAGCCTGGAAAGCAA+GGG | 0.625341 | 8.4:-79139874 | MS.gene022650:CDS |
CATTAGAAGAAGGCTCTGCA+AGG | 0.625798 | 8.4:+79142736 | None:intergenic |
ATGCTCAACAACAGAGAGAG+AGG | 0.628504 | 8.4:-79142716 | MS.gene022650:intron |
TCACAAACCTGAGCCAGGGA+TGG | 0.628933 | 8.4:+79137625 | None:intergenic |
CCTCTAGCAAGTCTTTCTCA+AGG | 0.629024 | 8.4:+79135438 | None:intergenic |
GTGGTGTCTCCATTAAAGGA+TGG | 0.630945 | 8.4:-79145323 | MS.gene022650:CDS |
ATGGAGCTTCATATATCCAA+AGG | 0.631566 | 8.4:-79133021 | MS.gene022650:CDS |
CCAGTGGAAATGCTACTGAA+AGG | 0.633164 | 8.4:-79134069 | MS.gene022650:CDS |
CAGCTCACAAACCTGAGCCA+GGG | 0.634400 | 8.4:+79137621 | None:intergenic |
CATTTGTTGGAAGGAACCAA+GGG | 0.639612 | 8.4:+79133204 | None:intergenic |
GTTGCAACTATGTACGGTGG+TGG | 0.640142 | 8.4:-79146760 | None:intergenic |
CATATGGAGTATCTGGAGCA+CGG | 0.643740 | 8.4:+79138261 | None:intergenic |
ACATCGTATGAGCTACCTGA+TGG | 0.659142 | 8.4:-79137889 | MS.gene022650:CDS |
AGAGTAAAGGTATTGGCCAG+TGG | 0.666409 | 8.4:-79134085 | MS.gene022650:CDS |
AAAATCTCTACGGTAGCCCA+AGG | 0.674998 | 8.4:+79145452 | None:intergenic |
CTTTACTCTAGCAGCCTGAG+GGG | 0.681009 | 8.4:+79134099 | None:intergenic |
GTGGAAATGCTACTGAAAGG+AGG | 0.681158 | 8.4:-79134066 | MS.gene022650:CDS |
TTTCTCCTAAAGGAATACCG+AGG | 0.688869 | 8.4:+79139737 | None:intergenic |
ATAATACCTGAAACTCTCCA+GGG | 0.701084 | 8.4:+79139705 | None:intergenic |
CCTTGAGAAAGACTTGCTAG+AGG | 0.710122 | 8.4:-79135438 | MS.gene022650:intron |
GCCGTTGCAACTATGTACGG+TGG | 0.734269 | 8.4:-79146763 | None:intergenic |
GGATGTTGATGAATCAGACG+AGG | 0.764479 | 8.4:-79145574 | MS.gene022650:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 79133009 | 79146773 | 79133009 | ID=MS.gene022650 |
chr8.4 | mRNA | 79133009 | 79146773 | 79133009 | ID=MS.gene022650.t1;Parent=MS.gene022650 |
chr8.4 | exon | 79146761 | 79146773 | 79146761 | ID=MS.gene022650.t1.exon1;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79146761 | 79146773 | 79146761 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79146580 | 79146671 | 79146580 | ID=MS.gene022650.t1.exon2;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79146580 | 79146671 | 79146580 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79145446 | 79145619 | 79145446 | ID=MS.gene022650.t1.exon3;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79145446 | 79145619 | 79145446 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79145272 | 79145345 | 79145272 | ID=MS.gene022650.t1.exon4;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79145272 | 79145345 | 79145272 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79142717 | 79142800 | 79142717 | ID=MS.gene022650.t1.exon5;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79142717 | 79142800 | 79142717 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79142568 | 79142628 | 79142568 | ID=MS.gene022650.t1.exon6;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79142568 | 79142628 | 79142568 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79142417 | 79142466 | 79142417 | ID=MS.gene022650.t1.exon7;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79142417 | 79142466 | 79142417 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79141156 | 79141210 | 79141156 | ID=MS.gene022650.t1.exon8;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79141156 | 79141210 | 79141156 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79139867 | 79139944 | 79139867 | ID=MS.gene022650.t1.exon9;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79139867 | 79139944 | 79139867 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79139712 | 79139765 | 79139712 | ID=MS.gene022650.t1.exon10;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79139712 | 79139765 | 79139712 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79138390 | 79138443 | 79138390 | ID=MS.gene022650.t1.exon11;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79138390 | 79138443 | 79138390 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79138258 | 79138318 | 79138258 | ID=MS.gene022650.t1.exon12;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79138258 | 79138318 | 79138258 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79137886 | 79137937 | 79137886 | ID=MS.gene022650.t1.exon13;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79137886 | 79137937 | 79137886 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79137633 | 79137699 | 79137633 | ID=MS.gene022650.t1.exon14;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79137633 | 79137699 | 79137633 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79136407 | 79136469 | 79136407 | ID=MS.gene022650.t1.exon15;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79136407 | 79136469 | 79136407 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79136019 | 79136081 | 79136019 | ID=MS.gene022650.t1.exon16;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79136019 | 79136081 | 79136019 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79135439 | 79135501 | 79135439 | ID=MS.gene022650.t1.exon17;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79135439 | 79135501 | 79135439 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79134061 | 79134125 | 79134061 | ID=MS.gene022650.t1.exon18;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79134061 | 79134125 | 79134061 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79133187 | 79133255 | 79133187 | ID=MS.gene022650.t1.exon19;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79133187 | 79133255 | 79133187 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
chr8.4 | exon | 79133009 | 79133054 | 79133009 | ID=MS.gene022650.t1.exon20;Parent=MS.gene022650.t1 |
chr8.4 | CDS | 79133009 | 79133054 | 79133009 | ID=cds.MS.gene022650.t1;Parent=MS.gene022650.t1 |
Gene Sequence |
Protein sequence |