Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055437.t1 | XP_024640354.1 | 99.3 | 429 | 3 | 0 | 1 | 429 | 1 | 429 | 3.50E-240 | 840.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055437.t1 | Q84M92 | 74.8 | 429 | 105 | 1 | 1 | 429 | 1 | 426 | 2.0e-188 | 659.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055437.t1 | A0A396HXX7 | 99.3 | 429 | 3 | 0 | 1 | 429 | 1 | 429 | 2.5e-240 | 840.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055437.t1 | MTR_8g464900 | 99.301 | 429 | 3 | 0 | 1 | 429 | 1 | 429 | 0.0 | 879 |
MS.gene055437.t1 | MTR_5g066400 | 99.070 | 430 | 3 | 1 | 1 | 429 | 1 | 430 | 0.0 | 874 |
MS.gene055437.t1 | MTR_5g066400 | 93.007 | 429 | 3 | 1 | 1 | 429 | 1 | 402 | 0.0 | 805 |
MS.gene055437.t1 | MTR_5g066400 | 98.741 | 397 | 4 | 1 | 1 | 396 | 1 | 397 | 0.0 | 801 |
MS.gene055437.t1 | MTR_8g007440 | 83.908 | 261 | 16 | 3 | 126 | 385 | 33 | 268 | 2.41e-151 | 430 |
MS.gene055437.t1 | MTR_0015s0130 | 37.269 | 432 | 198 | 11 | 1 | 429 | 1 | 362 | 7.93e-87 | 270 |
MS.gene055437.t1 | MTR_2g096840 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 2.23e-86 | 268 |
MS.gene055437.t1 | MTR_6g004000 | 36.806 | 432 | 200 | 11 | 1 | 429 | 1 | 362 | 1.36e-85 | 266 |
MS.gene055437.t1 | MTR_7g093260 | 36.343 | 432 | 202 | 11 | 1 | 429 | 1 | 362 | 1.15e-84 | 264 |
MS.gene055437.t1 | MTR_3g095530 | 36.659 | 431 | 200 | 11 | 1 | 428 | 1 | 361 | 2.97e-84 | 263 |
MS.gene055437.t1 | MTR_7g026230 | 36.574 | 432 | 201 | 11 | 1 | 429 | 1 | 362 | 5.49e-84 | 262 |
MS.gene055437.t1 | MTR_2g008050 | 35.963 | 431 | 203 | 11 | 1 | 428 | 1 | 361 | 1.29e-83 | 261 |
MS.gene055437.t1 | MTR_7g027185 | 28.404 | 426 | 227 | 7 | 5 | 418 | 2 | 361 | 2.06e-50 | 174 |
MS.gene055437.t1 | MTR_7g027185 | 28.404 | 426 | 227 | 7 | 5 | 418 | 2 | 361 | 3.65e-50 | 174 |
MS.gene055437.t1 | MTR_7g027185 | 29.101 | 378 | 198 | 6 | 5 | 378 | 2 | 313 | 3.87e-46 | 162 |
MS.gene055437.t1 | MTR_8g089630 | 28.345 | 441 | 239 | 13 | 9 | 421 | 9 | 400 | 1.39e-42 | 155 |
MS.gene055437.t1 | MTR_3g030550 | 25.641 | 429 | 232 | 12 | 7 | 429 | 1 | 348 | 5.88e-29 | 116 |
MS.gene055437.t1 | MTR_2g445210 | 23.094 | 459 | 272 | 11 | 9 | 429 | 7 | 422 | 2.48e-25 | 107 |
MS.gene055437.t1 | MTR_8g007445 | 66.250 | 80 | 25 | 1 | 1 | 80 | 1 | 78 | 4.95e-25 | 98.2 |
MS.gene055437.t1 | MTR_5g066390 | 76.923 | 52 | 11 | 1 | 1 | 51 | 1 | 52 | 2.24e-15 | 75.5 |
MS.gene055437.t1 | MTR_3g067945 | 26.891 | 238 | 142 | 8 | 7 | 237 | 19 | 231 | 1.46e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055437.t1 | AT1G18450 | 77.546 | 432 | 88 | 3 | 1 | 429 | 1 | 426 | 0.0 | 718 |
MS.gene055437.t1 | AT3G53750 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 6.01e-87 | 270 |
MS.gene055437.t1 | AT3G53750 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 6.01e-87 | 270 |
MS.gene055437.t1 | AT2G37620 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 6.01e-87 | 270 |
MS.gene055437.t1 | AT2G37620 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 6.01e-87 | 270 |
MS.gene055437.t1 | AT2G37620 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 6.01e-87 | 270 |
MS.gene055437.t1 | AT2G37620 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 6.01e-87 | 270 |
MS.gene055437.t1 | AT3G12110 | 37.269 | 432 | 198 | 11 | 1 | 429 | 1 | 362 | 1.36e-86 | 269 |
MS.gene055437.t1 | AT1G49240 | 37.269 | 432 | 198 | 9 | 1 | 429 | 1 | 362 | 2.50e-86 | 268 |
MS.gene055437.t1 | AT5G09810 | 37.500 | 432 | 197 | 11 | 1 | 429 | 1 | 362 | 2.93e-86 | 268 |
MS.gene055437.t1 | AT3G18780 | 37.269 | 432 | 198 | 9 | 1 | 429 | 1 | 362 | 2.93e-86 | 268 |
MS.gene055437.t1 | AT3G18780 | 37.269 | 432 | 198 | 9 | 1 | 429 | 1 | 362 | 2.93e-86 | 268 |
MS.gene055437.t1 | AT3G46520 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 6.60e-85 | 265 |
MS.gene055437.t1 | AT3G46520 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 6.60e-85 | 265 |
MS.gene055437.t1 | AT5G59370 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 7.43e-85 | 265 |
MS.gene055437.t1 | AT5G59370 | 36.574 | 432 | 201 | 10 | 1 | 429 | 1 | 362 | 7.43e-85 | 265 |
MS.gene055437.t1 | AT3G18780 | 36.768 | 427 | 197 | 9 | 1 | 424 | 1 | 357 | 1.14e-82 | 258 |
MS.gene055437.t1 | AT2G42100 | 34.965 | 429 | 206 | 8 | 4 | 429 | 5 | 363 | 1.19e-81 | 256 |
MS.gene055437.t1 | AT2G42090 | 33.333 | 423 | 202 | 8 | 10 | 428 | 4 | 350 | 3.34e-71 | 229 |
MS.gene055437.t1 | AT1G73910 | 67.550 | 151 | 40 | 1 | 1 | 151 | 1 | 142 | 9.16e-68 | 212 |
MS.gene055437.t1 | AT1G73910 | 67.550 | 151 | 40 | 1 | 1 | 151 | 1 | 142 | 9.16e-68 | 212 |
MS.gene055437.t1 | AT2G42170 | 34.091 | 352 | 186 | 7 | 78 | 429 | 9 | 314 | 3.63e-66 | 214 |
MS.gene055437.t1 | AT2G42170 | 34.091 | 352 | 186 | 7 | 78 | 429 | 9 | 314 | 3.63e-66 | 214 |
MS.gene055437.t1 | AT2G42170 | 33.718 | 347 | 184 | 7 | 78 | 424 | 9 | 309 | 1.91e-62 | 204 |
MS.gene055437.t1 | AT2G42170 | 33.718 | 347 | 184 | 7 | 78 | 424 | 9 | 309 | 1.91e-62 | 204 |
MS.gene055437.t1 | AT3G27000 | 29.274 | 427 | 222 | 8 | 5 | 418 | 2 | 361 | 3.16e-51 | 177 |
MS.gene055437.t1 | AT1G73910 | 68.644 | 118 | 28 | 1 | 1 | 118 | 1 | 109 | 1.55e-49 | 166 |
MS.gene055437.t1 | AT1G13180 | 27.088 | 443 | 242 | 12 | 9 | 421 | 8 | 399 | 2.70e-40 | 149 |
MS.gene055437.t1 | AT2G42170 | 33.865 | 251 | 121 | 6 | 179 | 429 | 11 | 216 | 8.02e-39 | 140 |
MS.gene055437.t1 | AT3G60830 | 24.769 | 432 | 232 | 11 | 7 | 429 | 1 | 348 | 4.99e-25 | 105 |
MS.gene055437.t1 | AT3G33520 | 25.538 | 372 | 214 | 7 | 94 | 429 | 61 | 405 | 2.53e-22 | 99.0 |
MS.gene055437.t1 | AT3G12380 | 27.660 | 235 | 138 | 7 | 10 | 237 | 22 | 231 | 3.49e-14 | 75.1 |
MS.gene055437.t1 | AT3G12380 | 28.085 | 235 | 143 | 7 | 10 | 237 | 22 | 237 | 4.96e-13 | 71.6 |
Find 115 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGCAATACCCTTGCTTTCC+AGG | 0.219314 | 8.1:-86152022 | None:intergenic |
AATACGCCCTGGAGAGTTTC+AGG | 0.253290 | 8.1:+86152173 | MS.gene055437:CDS |
GCATTTCACTTTCAGCTTGC+TGG | 0.254209 | 8.1:+86156432 | MS.gene055437:intron |
TATCACAGGACAATTGAAAT+TGG | 0.257174 | 8.1:+86154246 | MS.gene055437:intron |
GGGATATTGTTGACAGCATT+TGG | 0.259925 | 8.1:+86146592 | MS.gene055437:CDS |
GCAACAATTCCATCCTTTAA+TGG | 0.263838 | 8.1:-86146564 | None:intergenic |
TTCAGCTATAGTAATTGATT+TGG | 0.281934 | 8.1:+86145209 | MS.gene055437:CDS |
TTGTAGCTTTCAGATGTATT+AGG | 0.285708 | 8.1:-86153534 | None:intergenic |
ATGTAAATTGCAGTCAATTC+CGG | 0.286149 | 8.1:+86155466 | MS.gene055437:intron |
TCAGGTGGTGTCTCCATTAA+AGG | 0.291568 | 8.1:+86146551 | MS.gene055437:intron |
TCAAGGTAATTACTCGGATT+TGG | 0.294188 | 8.1:-86159252 | None:intergenic |
AGGAGCATGGGATGCTCTTT+AGG | 0.302704 | 8.1:-86149133 | None:intergenic |
TGAAACCTCGGTATTCCTTT+AGG | 0.316799 | 8.1:+86152142 | MS.gene055437:CDS |
AAACCATCATATGGAGTATC+TGG | 0.319612 | 8.1:-86153683 | None:intergenic |
CCACATCATTAGTTGTTGAT+TGG | 0.366348 | 8.1:+86149473 | MS.gene055437:CDS |
ATGCTACTGAAAGGAGGTTT+AGG | 0.372848 | 8.1:+86158370 | MS.gene055437:CDS |
TCAGCTATAGTAATTGATTT+GGG | 0.375486 | 8.1:+86145210 | MS.gene055437:CDS |
GCATTTGGGATCATGCCTTC+AGG | 0.378731 | 8.1:+86146607 | MS.gene055437:CDS |
TGTAAATTGCAGTCAATTCC+GGG | 0.387922 | 8.1:+86155467 | MS.gene055437:intron |
AACAATATTAGAAATGTTGA+TGG | 0.388533 | 8.1:+86146359 | MS.gene055437:CDS |
TTCAATTATCTTACCATTTG+AGG | 0.388965 | 8.1:-86155533 | None:intergenic |
GGCAGTATATTGGCTTCCCT+TGG | 0.405681 | 8.1:+86159206 | MS.gene055437:CDS |
GGATATTGTTGACAGCATTT+GGG | 0.407969 | 8.1:+86146593 | MS.gene055437:CDS |
GATGGATTGAAAAGAACATC+TGG | 0.409238 | 8.1:-86154288 | None:intergenic |
GTAAGAAATTCTCCTCCAAT+TGG | 0.412742 | 8.1:-86151981 | None:intergenic |
GCTCTTTAGGATCAATCAAT+AGG | 0.412944 | 8.1:-86149120 | None:intergenic |
AGAATTATTTAGTAGCATAC+TGG | 0.414090 | 8.1:+86155908 | MS.gene055437:CDS |
TTTCAATCCATCCCTGGCTC+AGG | 0.414421 | 8.1:+86154299 | MS.gene055437:CDS |
TACAGAAGGAAACACAGCTT+TGG | 0.420996 | 8.1:-86145274 | None:intergenic |
GCGTATTTCCTTTCTCCTAA+AGG | 0.428130 | 8.1:-86152157 | None:intergenic |
TCGGTATTCCTTTAGGAGAA+AGG | 0.431364 | 8.1:+86152149 | MS.gene055437:CDS |
ATTTGGAGAACCACATTTGT+TGG | 0.435174 | 8.1:-86159235 | None:intergenic |
CTGGATTGGAGGCAGTATAT+TGG | 0.435714 | 8.1:+86159196 | MS.gene055437:CDS |
ACAGAAGGAAACACAGCTTT+GGG | 0.447748 | 8.1:-86145273 | None:intergenic |
CTTTCAGCTTGCTGGTGGTA+CGG | 0.449113 | 8.1:+86156440 | MS.gene055437:intron |
TCTGCAACTTACTGGCCATC+AGG | 0.458733 | 8.1:-86154057 | None:intergenic |
CTCATGTGAACTTAGGTTGT+TGG | 0.462020 | 8.1:+86146266 | MS.gene055437:intron |
GGTTCACATACTTGTAAAGC+TGG | 0.464473 | 8.1:+86145231 | MS.gene055437:CDS |
AGATTGCTTGATGAAAAGCC+TGG | 0.475639 | 8.1:+86152004 | MS.gene055437:CDS |
TCAGCTCACAAACCTGAGCC+AGG | 0.478987 | 8.1:-86154311 | None:intergenic |
AGTGCGTGGGCTGCCTCAAA+TGG | 0.479420 | 8.1:+86155520 | MS.gene055437:CDS |
ATATGTAGGATCTCAGTCCT+TGG | 0.480592 | 8.1:+86146409 | MS.gene055437:CDS |
GCTGTGGCAACGTCTCCAAT+TGG | 0.487799 | 8.1:+86151966 | MS.gene055437:CDS |
ATTGGCAGTGTCTGGATTGG+AGG | 0.490582 | 8.1:+86159185 | MS.gene055437:intron |
CAGGTATACAAACCATCATA+TGG | 0.490698 | 8.1:-86153692 | None:intergenic |
TATGTAGGATCTCAGTCCTT+GGG | 0.498104 | 8.1:+86146410 | MS.gene055437:CDS |
TGTTGGAGCGATTGATCAAA+TGG | 0.503546 | 8.1:+86146283 | MS.gene055437:CDS |
ATTCCATTGCTCAGTGGTGG+AGG | 0.503728 | 8.1:+86150690 | MS.gene055437:intron |
TCTGCAAAGCTCTCCATGCC+CGG | 0.508842 | 8.1:-86155485 | None:intergenic |
GCTGAAAAGAACTCTGGCTC+TGG | 0.511526 | 8.1:+86146326 | MS.gene055437:CDS |
GGCTGCTAGAGTAAAGGTAT+TGG | 0.511652 | 8.1:+86158338 | MS.gene055437:CDS |
CCCTCAGGCTGCTAGAGTAA+AGG | 0.514929 | 8.1:+86158332 | MS.gene055437:CDS |
GTAGCTCATACGATGTCGTT+GGG | 0.515121 | 8.1:-86154035 | None:intergenic |
GGTGATTGCTAGTGATATCA+AGG | 0.517057 | 8.1:+86153643 | MS.gene055437:CDS |
TTTATTGGCAGTGTCTGGAT+TGG | 0.519842 | 8.1:+86159182 | MS.gene055437:intron |
CATAATACCTGAAACTCTCC+AGG | 0.520117 | 8.1:-86152180 | None:intergenic |
TGTTGTTGAGCATTAGAAGA+AGG | 0.520384 | 8.1:-86149163 | None:intergenic |
AGGATGGAATTGTTGCTGAC+TGG | 0.520781 | 8.1:+86146571 | MS.gene055437:CDS |
GGATGGAATTGTTGCTGACT+GGG | 0.521437 | 8.1:+86146572 | MS.gene055437:CDS |
AGGAGAAAGGAAATACGCCC+TGG | 0.526266 | 8.1:+86152162 | MS.gene055437:CDS |
TGAGGCAGCCCACGCACTGA+TGG | 0.526409 | 8.1:-86155515 | None:intergenic |
ATTGCAGTCAATTCCGGGCA+TGG | 0.526476 | 8.1:+86155472 | MS.gene055437:intron |
GGAAAGAGAAAATTATATGT+AGG | 0.529853 | 8.1:+86146395 | MS.gene055437:CDS |
TTGGTTCCTTCCAACAAATG+TGG | 0.534619 | 8.1:+86159225 | MS.gene055437:CDS |
AGAAGGCTCTGCAAGGAGCA+TGG | 0.535506 | 8.1:-86149146 | None:intergenic |
GATGAAAAGCCTGGAAAGCA+AGG | 0.538696 | 8.1:+86152013 | MS.gene055437:CDS |
GAAGGCTCTGCAAGGAGCAT+GGG | 0.539240 | 8.1:-86149145 | None:intergenic |
TTTCACTTTCAGCTTGCTGG+TGG | 0.540017 | 8.1:+86156435 | MS.gene055437:intron |
GGAGAACCACATTTGTTGGA+AGG | 0.543183 | 8.1:-86159231 | None:intergenic |
GGCTTCAATGCAACAACTGA+AGG | 0.545651 | 8.1:+86156461 | MS.gene055437:CDS |
TCTGATGCAGGAATCCCCTC+AGG | 0.547564 | 8.1:+86158317 | MS.gene055437:intron |
GCTCCAGATACTCCATATGA+TGG | 0.547700 | 8.1:+86153680 | MS.gene055437:CDS |
GGTAGCTCATACGATGTCGT+TGG | 0.549228 | 8.1:-86154036 | None:intergenic |
CCTTTCAGTAGCATTTCCAC+TGG | 0.562878 | 8.1:-86158361 | None:intergenic |
GTGGCAACGTCTCCAATTGG+AGG | 0.567917 | 8.1:+86151969 | MS.gene055437:CDS |
CCAATCAACAACTAATGATG+TGG | 0.572658 | 8.1:-86149473 | None:intergenic |
AATCTGACAGACTGTAGACT+TGG | 0.573313 | 8.1:+86153506 | MS.gene055437:intron |
GACGAGGCTGAAAAGAACTC+TGG | 0.578930 | 8.1:+86146320 | MS.gene055437:CDS |
TGTTGATGGTGATAAAGCCA+AGG | 0.582436 | 8.1:+86146373 | MS.gene055437:CDS |
TGATGGCTATGTTCTTCAGA+AGG | 0.588188 | 8.1:+86150737 | MS.gene055437:CDS |
AGTGTCATTGCAATCATGTA+CGG | 0.588607 | 8.1:+86145085 | None:intergenic |
TTACCTCCATAAAATCTCTA+CGG | 0.588637 | 8.1:-86146436 | None:intergenic |
AGAACATAGCCATCATGTAC+CGG | 0.593299 | 8.1:-86150729 | None:intergenic |
CCTTTACTCTAGCAGCCTGA+GGG | 0.593502 | 8.1:-86158332 | None:intergenic |
GAAATCGCTCCATCAGTGCG+TGG | 0.595457 | 8.1:+86155506 | MS.gene055437:CDS |
ACATTTGTTGGAAGGAACCA+AGG | 0.602188 | 8.1:-86159223 | None:intergenic |
ATTGCAATCATGTACGGTGG+TGG | 0.604323 | 8.1:+86145091 | None:intergenic |
ACAGTTGCACCGGTACATGA+TGG | 0.606325 | 8.1:+86150720 | MS.gene055437:CDS |
AAGCTACAAGCTCTACTCCC+AGG | 0.608537 | 8.1:+86153548 | MS.gene055437:CDS |
ACCTTTACTCTAGCAGCCTG+AGG | 0.611663 | 8.1:-86158333 | None:intergenic |
CCTGGAAAGCAAGGGTATTG+CGG | 0.612507 | 8.1:+86152022 | MS.gene055437:CDS |
ACTTGTAAAGCTGGTTACGC+TGG | 0.614767 | 8.1:+86145240 | MS.gene055437:CDS |
AAATCGCTCCATCAGTGCGT+GGG | 0.618283 | 8.1:+86155507 | MS.gene055437:CDS |
AGGATCAACTACAGTTGCAC+CGG | 0.623628 | 8.1:+86150710 | MS.gene055437:CDS |
GTTGATGGTGATAAAGCCAA+GGG | 0.625274 | 8.1:+86146374 | MS.gene055437:CDS |
ATGAAAAGCCTGGAAAGCAA+GGG | 0.625341 | 8.1:+86152014 | MS.gene055437:CDS |
CATTAGAAGAAGGCTCTGCA+AGG | 0.625798 | 8.1:-86149153 | None:intergenic |
ATGCTCAACAACAGAGAGAG+AGG | 0.628504 | 8.1:+86149173 | MS.gene055437:CDS |
TCACAAACCTGAGCCAGGGA+TGG | 0.628933 | 8.1:-86154306 | None:intergenic |
CCTCTAGCAAGTCTTTCTCA+AGG | 0.629024 | 8.1:-86156488 | None:intergenic |
GTGGTGTCTCCATTAAAGGA+TGG | 0.630945 | 8.1:+86146555 | MS.gene055437:CDS |
CCAGTGGAAATGCTACTGAA+AGG | 0.633164 | 8.1:+86158361 | MS.gene055437:CDS |
CAGCTCACAAACCTGAGCCA+GGG | 0.634400 | 8.1:-86154310 | None:intergenic |
CATTTGTTGGAAGGAACCAA+GGG | 0.639612 | 8.1:-86159222 | None:intergenic |
CATATGGAGTATCTGGAGCA+CGG | 0.650455 | 8.1:-86153676 | None:intergenic |
ACATCGTATGAGCTACCTGA+TGG | 0.659142 | 8.1:+86154042 | MS.gene055437:CDS |
AGAGTAAAGGTATTGGCCAG+TGG | 0.666409 | 8.1:+86158345 | MS.gene055437:CDS |
AAAATCTCTACGGTAGCCCA+AGG | 0.674998 | 8.1:-86146426 | None:intergenic |
CTTTACTCTAGCAGCCTGAG+GGG | 0.681009 | 8.1:-86158331 | None:intergenic |
GTGGAAATGCTACTGAAAGG+AGG | 0.681158 | 8.1:+86158364 | MS.gene055437:CDS |
TTTCTCCTAAAGGAATACCG+AGG | 0.688869 | 8.1:-86152147 | None:intergenic |
ATAATACCTGAAACTCTCCA+GGG | 0.701084 | 8.1:-86152179 | None:intergenic |
CCTTGAGAAAGACTTGCTAG+AGG | 0.710122 | 8.1:+86156488 | MS.gene055437:CDS |
GTCATTGCAATCATGTACGG+TGG | 0.726010 | 8.1:+86145088 | None:intergenic |
GGATGTTGATGAATCAGACG+AGG | 0.764479 | 8.1:+86146304 | MS.gene055437:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 86145100 | 86159261 | 86145100 | ID=MS.gene055437 |
chr8.1 | mRNA | 86145100 | 86159261 | 86145100 | ID=MS.gene055437.t1;Parent=MS.gene055437 |
chr8.1 | exon | 86145100 | 86145112 | 86145100 | ID=MS.gene055437.t1.exon1;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86145100 | 86145112 | 86145100 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86145202 | 86145293 | 86145202 | ID=MS.gene055437.t1.exon2;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86145202 | 86145293 | 86145202 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86146281 | 86146454 | 86146281 | ID=MS.gene055437.t1.exon3;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86146281 | 86146454 | 86146281 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86146555 | 86146628 | 86146555 | ID=MS.gene055437.t1.exon4;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86146555 | 86146628 | 86146555 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86149114 | 86149194 | 86149114 | ID=MS.gene055437.t1.exon5;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86149114 | 86149194 | 86149114 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86149283 | 86149343 | 86149283 | ID=MS.gene055437.t1.exon6;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86149283 | 86149343 | 86149283 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86149445 | 86149494 | 86149445 | ID=MS.gene055437.t1.exon7;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86149445 | 86149494 | 86149445 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86150704 | 86150758 | 86150704 | ID=MS.gene055437.t1.exon8;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86150704 | 86150758 | 86150704 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86151966 | 86152043 | 86151966 | ID=MS.gene055437.t1.exon9;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86151966 | 86152043 | 86151966 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86152141 | 86152194 | 86152141 | ID=MS.gene055437.t1.exon10;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86152141 | 86152194 | 86152141 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86153516 | 86153569 | 86153516 | ID=MS.gene055437.t1.exon11;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86153516 | 86153569 | 86153516 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86153641 | 86153701 | 86153641 | ID=MS.gene055437.t1.exon12;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86153641 | 86153701 | 86153641 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86154016 | 86154067 | 86154016 | ID=MS.gene055437.t1.exon13;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86154016 | 86154067 | 86154016 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86154254 | 86154320 | 86154254 | ID=MS.gene055437.t1.exon14;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86154254 | 86154320 | 86154254 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86155479 | 86155541 | 86155479 | ID=MS.gene055437.t1.exon15;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86155479 | 86155541 | 86155479 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86155867 | 86155929 | 86155867 | ID=MS.gene055437.t1.exon16;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86155867 | 86155929 | 86155867 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86156447 | 86156509 | 86156447 | ID=MS.gene055437.t1.exon17;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86156447 | 86156509 | 86156447 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86158327 | 86158391 | 86158327 | ID=MS.gene055437.t1.exon18;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86158327 | 86158391 | 86158327 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
chr8.1 | exon | 86159193 | 86159261 | 86159193 | ID=MS.gene055437.t1.exon19;Parent=MS.gene055437.t1 |
chr8.1 | CDS | 86159193 | 86159261 | 86159193 | ID=cds.MS.gene055437.t1;Parent=MS.gene055437.t1 |
Gene Sequence |
Protein sequence |