Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007011.t1 | XP_013450328.1 | 100 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 1.30E-223 | 785.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007011.t1 | Q8LFS6 | 64.1 | 443 | 139 | 8 | 1 | 433 | 1 | 433 | 6.3e-145 | 515.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007011.t1 | A0A072U4V5 | 100.0 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 9.7e-224 | 785.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29182 | MS.gene007011 | PPI |
| MS.gene007011 | MS.gene69969 | PPI |
| MS.gene86206 | MS.gene007011 | PPI |
| MS.gene007011 | MS.gene47029 | PPI |
| MS.gene99555 | MS.gene007011 | PPI |
| MS.gene007011 | MS.gene64891 | PPI |
| MS.gene007011 | MS.gene39783 | PPI |
| MS.gene23814 | MS.gene007011 | PPI |
| MS.gene007011 | MS.gene016896 | PPI |
| MS.gene007011 | MS.gene022650 | PPI |
| MS.gene37610 | MS.gene007011 | PPI |
| MS.gene44305 | MS.gene007011 | PPI |
| MS.gene034408 | MS.gene007011 | PPI |
| MS.gene007011 | MS.gene86544 | PPI |
| MS.gene35490 | MS.gene007011 | PPI |
| MS.gene007011 | MS.gene035578 | PPI |
| MS.gene055437 | MS.gene007011 | PPI |
| MS.gene007011 | MS.gene65332 | PPI |
| MS.gene066499 | MS.gene007011 | PPI |
| MS.gene72659 | MS.gene007011 | PPI |
| MS.gene007011 | MS.gene027709 | PPI |
| MS.gene007011 | MS.gene037838 | PPI |
| MS.gene007011 | MS.gene84284 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007011.t1 | MTR_7g107580 | 100.000 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 0.0 | 897 |
| MS.gene007011.t1 | MTR_7g107580 | 99.770 | 434 | 0 | 1 | 1 | 434 | 1 | 433 | 0.0 | 891 |
| MS.gene007011.t1 | MTR_7g107580 | 99.710 | 345 | 0 | 1 | 1 | 345 | 1 | 344 | 0.0 | 706 |
| MS.gene007011.t1 | MTR_4g122650 | 48.315 | 178 | 88 | 2 | 16 | 190 | 88 | 264 | 2.52e-50 | 181 |
| MS.gene007011.t1 | MTR_7g109810 | 30.556 | 216 | 127 | 2 | 16 | 214 | 74 | 283 | 1.05e-28 | 116 |
| MS.gene007011.t1 | MTR_7g109810 | 32.984 | 191 | 105 | 3 | 16 | 189 | 74 | 258 | 9.39e-28 | 115 |
| MS.gene007011.t1 | MTR_7g109810 | 32.461 | 191 | 106 | 2 | 16 | 189 | 74 | 258 | 1.23e-27 | 111 |
| MS.gene007011.t1 | MTR_4g085540 | 28.374 | 289 | 173 | 11 | 1 | 270 | 198 | 471 | 8.50e-16 | 80.1 |
| MS.gene007011.t1 | MTR_3g065190 | 26.016 | 246 | 161 | 8 | 6 | 245 | 16 | 246 | 1.61e-14 | 75.1 |
| MS.gene007011.t1 | MTR_1g097440 | 26.542 | 373 | 204 | 18 | 5 | 320 | 197 | 556 | 2.92e-13 | 72.0 |
| MS.gene007011.t1 | MTR_3g084040 | 40.000 | 80 | 47 | 1 | 351 | 430 | 38 | 116 | 6.74e-13 | 66.2 |
| MS.gene007011.t1 | MTR_5g097580 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.67e-12 | 69.3 |
| MS.gene007011.t1 | MTR_5g097580 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.68e-12 | 69.3 |
| MS.gene007011.t1 | MTR_3g101370 | 24.138 | 261 | 157 | 8 | 4 | 247 | 175 | 411 | 2.25e-12 | 68.9 |
| MS.gene007011.t1 | MTR_2g026180 | 22.997 | 287 | 167 | 7 | 17 | 275 | 5 | 265 | 8.76e-12 | 67.4 |
| MS.gene007011.t1 | MTR_3g082650 | 25.146 | 171 | 109 | 4 | 17 | 178 | 19 | 179 | 2.76e-11 | 65.1 |
| MS.gene007011.t1 | MTR_3g025880 | 37.037 | 81 | 51 | 0 | 347 | 427 | 42 | 122 | 2.86e-11 | 65.5 |
| MS.gene007011.t1 | MTR_3g055990 | 25.444 | 169 | 108 | 4 | 17 | 168 | 7 | 174 | 4.15e-11 | 65.1 |
| MS.gene007011.t1 | MTR_4g036415 | 35.514 | 107 | 69 | 0 | 317 | 423 | 419 | 525 | 4.36e-11 | 65.5 |
| MS.gene007011.t1 | MTR_3g055990 | 25.444 | 169 | 108 | 4 | 17 | 168 | 7 | 174 | 4.48e-11 | 65.1 |
| MS.gene007011.t1 | MTR_7g118120 | 26.316 | 171 | 113 | 5 | 17 | 184 | 105 | 265 | 4.67e-11 | 65.1 |
| MS.gene007011.t1 | MTR_4g109540 | 35.897 | 78 | 50 | 0 | 347 | 424 | 40 | 117 | 5.03e-11 | 63.5 |
| MS.gene007011.t1 | MTR_1g019150 | 28.000 | 275 | 162 | 11 | 7 | 263 | 207 | 463 | 5.74e-11 | 65.1 |
| MS.gene007011.t1 | MTR_3g103420 | 24.339 | 189 | 120 | 3 | 12 | 177 | 6 | 194 | 7.60e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007011.t1 | AT4G03110 | 69.213 | 432 | 105 | 10 | 15 | 433 | 17 | 433 | 0.0 | 570 |
| MS.gene007011.t1 | AT1G03457 | 66.355 | 428 | 117 | 10 | 7 | 428 | 3 | 409 | 0.0 | 551 |
| MS.gene007011.t1 | AT1G03457 | 64.989 | 437 | 117 | 11 | 7 | 428 | 3 | 418 | 0.0 | 543 |
| MS.gene007011.t1 | AT4G03110 | 68.434 | 396 | 98 | 9 | 15 | 398 | 17 | 397 | 0.0 | 521 |
| MS.gene007011.t1 | AT4G03110 | 68.514 | 397 | 97 | 10 | 15 | 398 | 17 | 398 | 0.0 | 519 |
| MS.gene007011.t1 | AT1G03457 | 62.769 | 325 | 94 | 10 | 110 | 428 | 1 | 304 | 2.62e-128 | 374 |
| MS.gene007011.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 114 | 295 | 5.91e-48 | 172 |
| MS.gene007011.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 39 | 220 | 4.67e-47 | 172 |
| MS.gene007011.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 114 | 295 | 6.86e-47 | 172 |
| MS.gene007011.t1 | AT2G47310 | 32.967 | 182 | 112 | 2 | 17 | 189 | 111 | 291 | 6.22e-26 | 110 |
| MS.gene007011.t1 | AT4G34110 | 27.698 | 278 | 167 | 11 | 5 | 263 | 204 | 466 | 4.08e-15 | 78.2 |
| MS.gene007011.t1 | AT4G00830 | 26.901 | 171 | 112 | 5 | 17 | 184 | 117 | 277 | 3.95e-14 | 74.7 |
| MS.gene007011.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 5.03e-14 | 74.3 |
| MS.gene007011.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 5.03e-14 | 74.3 |
| MS.gene007011.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 5.03e-14 | 74.3 |
| MS.gene007011.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 6.34e-14 | 73.6 |
| MS.gene007011.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 6.34e-14 | 73.6 |
| MS.gene007011.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 6.34e-14 | 73.6 |
| MS.gene007011.t1 | AT2G18510 | 26.316 | 228 | 155 | 7 | 6 | 227 | 16 | 236 | 3.23e-13 | 71.2 |
| MS.gene007011.t1 | AT1G71770 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 3.85e-13 | 72.0 |
| MS.gene007011.t1 | AT1G71770 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 3.85e-13 | 72.0 |
| MS.gene007011.t1 | AT3G07810 | 26.316 | 171 | 106 | 4 | 17 | 168 | 7 | 176 | 9.54e-13 | 70.5 |
| MS.gene007011.t1 | AT3G07810 | 26.316 | 171 | 106 | 4 | 17 | 168 | 7 | 176 | 1.27e-12 | 70.1 |
| MS.gene007011.t1 | AT4G00830 | 29.586 | 169 | 102 | 5 | 17 | 184 | 117 | 269 | 1.52e-12 | 69.7 |
| MS.gene007011.t1 | AT4G00830 | 29.586 | 169 | 102 | 5 | 17 | 184 | 117 | 269 | 1.52e-12 | 69.7 |
| MS.gene007011.t1 | AT4G13850 | 42.169 | 83 | 47 | 1 | 351 | 433 | 37 | 118 | 1.79e-12 | 65.5 |
| MS.gene007011.t1 | AT4G13850 | 42.169 | 83 | 47 | 1 | 351 | 433 | 37 | 118 | 1.99e-12 | 65.5 |
| MS.gene007011.t1 | AT4G13850 | 42.169 | 83 | 47 | 1 | 351 | 433 | 37 | 118 | 1.00e-11 | 63.2 |
| MS.gene007011.t1 | AT1G22760 | 42.857 | 77 | 43 | 1 | 346 | 422 | 226 | 301 | 1.51e-11 | 67.0 |
| MS.gene007011.t1 | AT3G13224 | 21.698 | 212 | 131 | 4 | 17 | 220 | 20 | 204 | 1.72e-11 | 65.9 |
| MS.gene007011.t1 | AT4G13850 | 42.857 | 77 | 44 | 0 | 351 | 427 | 37 | 113 | 1.82e-11 | 62.0 |
| MS.gene007011.t1 | AT2G23350 | 26.667 | 345 | 207 | 17 | 1 | 324 | 210 | 529 | 2.23e-11 | 66.2 |
| MS.gene007011.t1 | AT5G50250 | 24.324 | 185 | 123 | 4 | 14 | 187 | 111 | 289 | 6.21e-11 | 63.5 |
| MS.gene007011.t1 | AT5G40490 | 26.316 | 171 | 107 | 4 | 17 | 178 | 43 | 203 | 6.30e-11 | 64.3 |
| MS.gene007011.t1 | AT5G51300 | 40.000 | 75 | 45 | 0 | 349 | 423 | 480 | 554 | 7.10e-11 | 64.7 |
| MS.gene007011.t1 | AT5G51300 | 40.000 | 75 | 45 | 0 | 349 | 423 | 480 | 554 | 7.10e-11 | 64.7 |
| MS.gene007011.t1 | AT5G51300 | 40.000 | 75 | 45 | 0 | 349 | 423 | 480 | 554 | 7.10e-11 | 64.7 |
| MS.gene007011.t1 | AT3G13224 | 21.698 | 212 | 131 | 4 | 17 | 220 | 11 | 195 | 8.73e-11 | 63.5 |
| MS.gene007011.t1 | AT1G01080 | 33.721 | 86 | 57 | 0 | 346 | 431 | 105 | 190 | 8.86e-11 | 63.2 |
Find 0 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAATTATGTAATTAT+TGG | + | 51724:3003-3022 | MS.gene007011:intron | 10.0% |
| !! | GTCATATAAATAATTATTAA+CGG | - | 51724:4671-4690 | None:intergenic | 10.0% |
| !! | TCATATAAATAATTATTAAC+GGG | - | 51724:4670-4689 | None:intergenic | 10.0% |
| !! | TTAATAATTATTTATATGAC+AGG | + | 51724:4671-4690 | MS.gene007011:intron | 10.0% |
| !!! | GTAATATAATGTATTTTATA+TGG | + | 51724:4054-4073 | MS.gene007011:intron | 10.0% |
| !! | AAAAAAAAAACACGAAAATT+AGG | - | 51724:2315-2334 | None:intergenic | 15.0% |
| !! | AAAAAAAAACACGAAAATTA+GGG | - | 51724:2314-2333 | None:intergenic | 15.0% |
| !! | AATAATGATACAAAATAATG+TGG | - | 51724:3405-3424 | None:intergenic | 15.0% |
| !! | ATTTCTATAATTAAGTTTAG+TGG | + | 51724:3034-3053 | MS.gene007011:intron | 15.0% |
| !! | CATGTTGATATATTTATATT+CGG | + | 51724:5922-5941 | MS.gene007011:intron | 15.0% |
| !! | CTGATAATAATTTAAGAAAA+TGG | + | 51724:2778-2797 | MS.gene007011:intron | 15.0% |
| !! | GGAATAAAATTTAAAAATTC+AGG | - | 51724:3999-4018 | None:intergenic | 15.0% |
| !! | TAATAATTTAAGAAAATGGA+CGG | + | 51724:2782-2801 | MS.gene007011:intron | 15.0% |
| !! | TCATATGAATTGAATAAAAA+CGG | - | 51724:2478-2497 | None:intergenic | 15.0% |
| !!! | AATTTTAGCAATTTATGTTT+TGG | + | 51724:2600-2619 | MS.gene007011:intron | 15.0% |
| !!! | ATATTACTATATTTTCACTT+AGG | + | 51724:6294-6313 | MS.gene007011:intron | 15.0% |
| !!! | TTATTCCTATTTTTCATTTT+TGG | + | 51724:4012-4031 | MS.gene007011:intron | 15.0% |
| !! | AAAATTGAAATAACAATTGC+AGG | - | 51724:4561-4580 | None:intergenic | 20.0% |
| !! | AAATTTAAAAATTCAGGTGA+TGG | - | 51724:3993-4012 | None:intergenic | 20.0% |
| !! | AATAAGTTAAAGGACTAAAA+AGG | - | 51724:5956-5975 | None:intergenic | 20.0% |
| !! | AATAATTTAAGAAAATGGAC+GGG | + | 51724:2783-2802 | MS.gene007011:intron | 20.0% |
| !! | AGATAATTACTTATGAAAGA+AGG | - | 51724:3624-3643 | None:intergenic | 20.0% |
| !! | ATTATATTACACAATTAACC+TGG | - | 51724:4044-4063 | None:intergenic | 20.0% |
| !! | ATTATTATCAGTGTCATATA+TGG | - | 51724:2769-2788 | None:intergenic | 20.0% |
| !! | ATTCATTCTTTATTCTTTCT+AGG | + | 51724:3806-3825 | MS.gene007011:intron | 20.0% |
| !! | CATTAGTGACATAATTAAAA+TGG | - | 51724:3231-3250 | None:intergenic | 20.0% |
| !! | CTTATTAGTAATGAATTTGA+TGG | + | 51724:6473-6492 | MS.gene007011:intron | 20.0% |
| !! | TACTACCAAAAATGAAAAAT+AGG | - | 51724:4020-4039 | None:intergenic | 20.0% |
| !! | TAGTAATATTTATCGTTGTA+AGG | - | 51724:6283-6302 | None:intergenic | 20.0% |
| !!! | AAAATGTGATGATTTTTGAA+TGG | - | 51724:5433-5452 | None:intergenic | 20.0% |
| !!! | AAGGATTTACAAATTTTAAG+AGG | + | 51724:3744-3763 | MS.gene007011:CDS | 20.0% |
| !!! | ATCTCTAAAATGAGTAAATT+TGG | - | 51724:6182-6201 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTGTTTCTAATTC+AGG | + | 51724:3448-3467 | MS.gene007011:intron | 20.0% |
| !!! | CATCTTGTATTTAAAATGAT+TGG | - | 51724:4186-4205 | None:intergenic | 20.0% |
| !!! | GTTACAATTTTAGTTGTAAA+TGG | + | 51724:4439-4458 | MS.gene007011:intron | 20.0% |
| !!! | TAAAGCCTTAAATACATTTT+TGG | - | 51724:6241-6260 | None:intergenic | 20.0% |
| !!! | TCATTTTAAATACAAGATGA+AGG | + | 51724:4187-4206 | MS.gene007011:intron | 20.0% |
| !!! | TTCGTGTTTTTTTTTTTTGT+AGG | + | 51724:2319-2338 | MS.gene007011:intron | 20.0% |
| ! | AATGATAATAAATGACTTCC+AGG | - | 51724:5056-5075 | None:intergenic | 25.0% |
| ! | ACTACTATTTAGCAATATAG+TGG | + | 51724:4266-4285 | MS.gene007011:intron | 25.0% |
| ! | AGTTAACGTAATTCATTCAT+AGG | - | 51724:3183-3202 | None:intergenic | 25.0% |
| ! | ATAATTTAAGAAAATGGACG+GGG | + | 51724:2784-2803 | MS.gene007011:intron | 25.0% |
| ! | ATATTTGTATCACAACTACT+TGG | - | 51724:3284-3303 | None:intergenic | 25.0% |
| ! | ATTAGGAGGTAAGAAATTAA+AGG | + | 51724:6603-6622 | MS.gene007011:CDS | 25.0% |
| ! | CATTATTCTTCATTCAGATT+GGG | + | 51724:3418-3437 | MS.gene007011:intron | 25.0% |
| ! | GAACCTCAAAAATAAGTTAA+AGG | - | 51724:5966-5985 | None:intergenic | 25.0% |
| ! | GCATGTCATTGATATAAAAA+TGG | - | 51724:3602-3621 | None:intergenic | 25.0% |
| ! | GGAAGTCATTTATTATCATT+TGG | + | 51724:5056-5075 | MS.gene007011:intron | 25.0% |
| ! | GTTCATCAAAATAACAAACT+TGG | - | 51724:2871-2890 | None:intergenic | 25.0% |
| ! | GTTTAGGGAAATAGTAATAA+AGG | - | 51724:6125-6144 | None:intergenic | 25.0% |
| ! | TAATTCATTCATAGGTTACT+TGG | - | 51724:3175-3194 | None:intergenic | 25.0% |
| ! | TACAACTAAAATTGTAACTG+AGG | - | 51724:4437-4456 | None:intergenic | 25.0% |
| ! | TAGTAGATTTGAAGAATTAG+CGG | - | 51724:2273-2292 | None:intergenic | 25.0% |
| ! | TATGAATGAATTACGTTAAC+TGG | + | 51724:3182-3201 | MS.gene007011:intron | 25.0% |
| ! | TCAAAATGTTCAATAGTATC+CGG | - | 51724:3317-3336 | None:intergenic | 25.0% |
| ! | TCACAATAAGAAAACATTAC+CGG | + | 51724:2399-2418 | MS.gene007011:CDS | 25.0% |
| ! | TCATTATTCTTCATTCAGAT+TGG | + | 51724:3417-3436 | MS.gene007011:intron | 25.0% |
| ! | TCATTCTATACAGAAATAGA+AGG | + | 51724:4112-4131 | MS.gene007011:intron | 25.0% |
| ! | TCTATAATTAAGTTTAGTGG+CGG | + | 51724:3037-3056 | MS.gene007011:intron | 25.0% |
| ! | TTAATTTCTTACCTCCTAAT+TGG | - | 51724:6603-6622 | None:intergenic | 25.0% |
| ! | TTATTACTATTTCCCTAAAC+TGG | + | 51724:6125-6144 | MS.gene007011:intron | 25.0% |
| !! | GACATTAATTTTCTCTTGAT+AGG | + | 51724:5509-5528 | MS.gene007011:intron | 25.0% |
| !! | TCTTTATTCTTTCTAGGTTT+TGG | + | 51724:3812-3831 | MS.gene007011:intron | 25.0% |
| !! | TGCGTTTCATTGAAATTTTT+GGG | + | 51724:3140-3159 | MS.gene007011:intron | 25.0% |
| !! | TTAGATAGATAACATGCTTT+TGG | + | 51724:4371-4390 | MS.gene007011:intron | 25.0% |
| !! | TTATGCTGTTTAATTCAATG+TGG | + | 51724:2450-2469 | MS.gene007011:intron | 25.0% |
| !! | TTGCGTTTCATTGAAATTTT+TGG | + | 51724:3139-3158 | MS.gene007011:intron | 25.0% |
| !!! | AAGTAAAGGTGCTTATTTTA+CGG | + | 51724:3779-3798 | MS.gene007011:intron | 25.0% |
| !!! | AGTCCTTTAACTTATTTTTG+AGG | + | 51724:5960-5979 | MS.gene007011:intron | 25.0% |
| !!! | ATAGACTCATTTTAGAGTTA+AGG | - | 51724:5998-6017 | None:intergenic | 25.0% |
| !!! | ATAGTTTCTAGGATTCATAT+TGG | - | 51724:5655-5674 | None:intergenic | 25.0% |
| !!! | CTTATTTTTGAGGTTCAATT+TGG | + | 51724:5970-5989 | MS.gene007011:intron | 25.0% |
| !!! | TAGACTCATTTTAGAGTTAA+GGG | - | 51724:5997-6016 | None:intergenic | 25.0% |
| !!! | TAGTTTCTAGGATTCATATT+GGG | - | 51724:5654-5673 | None:intergenic | 25.0% |
| AAAATTGTAACTGAGGTTGA+AGG | - | 51724:4430-4449 | None:intergenic | 30.0% | |
| AAATGACCAACTTGTGTTAA+CGG | - | 51724:6040-6059 | None:intergenic | 30.0% | |
| AAATGGTCTTTGCAGTATAT+TGG | + | 51724:4456-4475 | MS.gene007011:intron | 30.0% | |
| AACCAAAAATGTGAAACACT+AGG | - | 51724:2698-2717 | None:intergenic | 30.0% | |
| AATTAAAGGTTCAGCATAAG+AGG | + | 51724:6617-6636 | MS.gene007011:CDS | 30.0% | |
| ACAATAAGAAAACATTACCG+GGG | + | 51724:2401-2420 | MS.gene007011:CDS | 30.0% | |
| ACACACATGACAAAATTTGA+CGG | + | 51724:5093-5112 | MS.gene007011:intron | 30.0% | |
| ACCAAAAATGTGAAACACTA+GGG | - | 51724:2697-2716 | None:intergenic | 30.0% | |
| AGGGACCAAAAATGTATTTA+AGG | + | 51724:6233-6252 | MS.gene007011:intron | 30.0% | |
| ATCCTTTATAGTTCCATACT+TGG | - | 51724:3730-3749 | None:intergenic | 30.0% | |
| ATTAAAGGTTCAGCATAAGA+GGG | + | 51724:6618-6637 | MS.gene007011:CDS | 30.0% | |
| ATTCAGTCACAAAATCTTGT+TGG | + | 51724:4492-4511 | MS.gene007011:intron | 30.0% | |
| ATTGAACAGATAAGGATGAT+TGG | + | 51724:2906-2925 | MS.gene007011:intron | 30.0% | |
| CACAATAAGAAAACATTACC+GGG | + | 51724:2400-2419 | MS.gene007011:CDS | 30.0% | |
| GATATATGCTGTCATGTATA+GGG | + | 51724:5150-5169 | MS.gene007011:intron | 30.0% | |
| GATGCATTATTGAACAGATA+AGG | + | 51724:2898-2917 | MS.gene007011:intron | 30.0% | |
| TACAAATATGCCTAAAAAGC+CGG | + | 51724:3295-3314 | MS.gene007011:intron | 30.0% | |
| TAGTAATAAAGGCTTAGCTT+TGG | - | 51724:6114-6133 | None:intergenic | 30.0% | |
| TATCACATACCTCAAGAATT+TGG | + | 51724:6342-6361 | MS.gene007011:CDS | 30.0% | |
| TCAACTTCAGAAATGTTCTT+TGG | - | 51724:3690-3709 | None:intergenic | 30.0% | |
| TCACTTGCAATGTTTGATAA+CGG | - | 51724:6159-6178 | None:intergenic | 30.0% | |
| TCTGCTATTAGTATGATGAA+TGG | + | 51724:6574-6593 | MS.gene007011:CDS | 30.0% | |
| TGATATATGCTGTCATGTAT+AGG | + | 51724:5149-5168 | MS.gene007011:intron | 30.0% | |
| TGCAAACACAAGACAAAAAA+AGG | - | 51724:5030-5049 | None:intergenic | 30.0% | |
| TTCATTACTAATAAGAGCAG+AGG | - | 51724:6468-6487 | None:intergenic | 30.0% | |
| TTCCTTAATCACAATTCACA+AGG | + | 51724:3837-3856 | MS.gene007011:intron | 30.0% | |
| ! | AATCAATGGAAAGCACAAAA+TGG | + | 51724:3948-3967 | MS.gene007011:CDS | 30.0% |
| ! | AGCATCTGATCAGTAATTTT+GGG | - | 51724:4991-5010 | None:intergenic | 30.0% |
| ! | AGGGAAAATAATTTGTGCTT+GGG | - | 51724:4949-4968 | None:intergenic | 30.0% |
| ! | ATTATTAACGGGTAAAACCT+AGG | - | 51724:4659-4678 | None:intergenic | 30.0% |
| ! | GAACACTATTTTCTTTGACA+AGG | - | 51724:2968-2987 | None:intergenic | 30.0% |
| ! | TAGCATCTGATCAGTAATTT+TGG | - | 51724:4992-5011 | None:intergenic | 30.0% |
| !! | AGTTTCTAGGATTCATATTG+GGG | - | 51724:5653-5672 | None:intergenic | 30.0% |
| !!! | TGAATTTGATGGATTTTGTG+TGG | + | 51724:6484-6503 | MS.gene007011:intron | 30.0% |
| !!! | TGGTGCTTATTGCTATTTTT+GGG | + | 51724:2620-2639 | MS.gene007011:intron | 30.0% |
| !!! | TTGGTGCTTATTGCTATTTT+TGG | + | 51724:2619-2638 | MS.gene007011:intron | 30.0% |
| AACTCTACCAAATGGTTGAA+AGG | - | 51724:6388-6407 | None:intergenic | 35.0% | |
| AACTTGATCCAAGTTTGGAA+AGG | + | 51724:4698-4717 | MS.gene007011:intron | 35.0% | |
| AATGAATTACGTTAACTGGC+AGG | + | 51724:3186-3205 | MS.gene007011:intron | 35.0% | |
| ACCAAACCGAACCTTAAATT+AGG | + | 51724:6207-6226 | MS.gene007011:intron | 35.0% | |
| ACTTGATCCAAGTTTGGAAA+GGG | + | 51724:4699-4718 | MS.gene007011:intron | 35.0% | |
| AGCCATCCAAAAAGAATAAG+CGG | - | 51724:4158-4177 | None:intergenic | 35.0% | |
| AGCTGAATAAATCTCAAGAC+TGG | + | 51724:4776-4795 | MS.gene007011:intron | 35.0% | |
| AGTGATGAAAGCTATAAGAG+TGG | - | 51724:2650-2669 | None:intergenic | 35.0% | |
| ATACAGAAATAGAAGGCAAG+TGG | + | 51724:4119-4138 | MS.gene007011:intron | 35.0% | |
| ATATAACGGTTATGGCTATC+AGG | + | 51724:5326-5345 | MS.gene007011:CDS | 35.0% | |
| ATGATGAATGGATGCCAATT+AGG | + | 51724:6586-6605 | MS.gene007011:CDS | 35.0% | |
| ATGTGAAACACTAGGGTATA+TGG | - | 51724:2690-2709 | None:intergenic | 35.0% | |
| CAAAATGGAAACCTAATGGT+GGG | + | 51724:4593-4612 | MS.gene007011:intron | 35.0% | |
| CAATAAGAAAACATTACCGG+GGG | + | 51724:2402-2421 | MS.gene007011:CDS | 35.0% | |
| CGAACCTTAAATTAGGCTAA+GGG | + | 51724:6214-6233 | MS.gene007011:intron | 35.0% | |
| CTCCAAGTATGGAACTATAA+AGG | + | 51724:3725-3744 | MS.gene007011:CDS | 35.0% | |
| CTTATTGTGACACGCATTAA+CGG | - | 51724:2389-2408 | None:intergenic | 35.0% | |
| GACATAATTAAAATGGAGCG+TGG | - | 51724:3224-3243 | None:intergenic | 35.0% | |
| GAGAAGAACTGCATGAATTA+AGG | - | 51724:5396-5415 | None:intergenic | 35.0% | |
| GCTGAATAAATCTCAAGACT+GGG | + | 51724:4777-4796 | MS.gene007011:intron | 35.0% | |
| GGTTATGTTCCTCCATATAA+CGG | + | 51724:5312-5331 | MS.gene007011:CDS | 35.0% | |
| GTCTCAAAATGGAAACCTAA+TGG | + | 51724:4589-4608 | MS.gene007011:intron | 35.0% | |
| GTCTTGAGATTTATTCAGCT+CGG | - | 51724:4776-4795 | None:intergenic | 35.0% | |
| GTGATGAAAGCTATAAGAGT+GGG | - | 51724:2649-2668 | None:intergenic | 35.0% | |
| TACAGAAATAGAAGGCAAGT+GGG | + | 51724:4120-4139 | MS.gene007011:intron | 35.0% | |
| TCAAAATGGAAACCTAATGG+TGG | + | 51724:4592-4611 | MS.gene007011:intron | 35.0% | |
| TCAGAACACAAACTCTTCAT+TGG | + | 51724:3657-3676 | MS.gene007011:intron | 35.0% | |
| TCTCAGCATCCTTCATTATT+TGG | + | 51724:5276-5295 | MS.gene007011:CDS | 35.0% | |
| TCTTGAGATTTATTCAGCTC+GGG | - | 51724:4775-4794 | None:intergenic | 35.0% | |
| TCTTGATCTCCAAATTCTTG+AGG | - | 51724:6354-6373 | None:intergenic | 35.0% | |
| TGAATCAAGGAAATGCATTG+CGG | + | 51724:5616-5635 | MS.gene007011:CDS | 35.0% | |
| TGATAGCCATAACCGTTATA+TGG | - | 51724:5327-5346 | None:intergenic | 35.0% | |
| TGTGAAACACTAGGGTATAT+GGG | - | 51724:2689-2708 | None:intergenic | 35.0% | |
| TGTTCCCTTAGTTGTCAAAT+GGG | + | 51724:5179-5198 | MS.gene007011:CDS | 35.0% | |
| TTATGTCCGTTAACACAAGT+TGG | + | 51724:6031-6050 | MS.gene007011:intron | 35.0% | |
| TTCTCTTACCATGTTGTAGT+AGG | + | 51724:3871-3890 | MS.gene007011:intron | 35.0% | |
| TTTGACGACTTGATTATCCA+AGG | + | 51724:3332-3351 | MS.gene007011:intron | 35.0% | |
| TTTGTATCACAACTACTTGG+AGG | - | 51724:3281-3300 | None:intergenic | 35.0% | |
| TTTGTATCCCTGTCTCAAAA+TGG | + | 51724:4578-4597 | MS.gene007011:intron | 35.0% | |
| ! | AACCGCTTATTCTTTTTGGA+TGG | + | 51724:4153-4172 | MS.gene007011:intron | 35.0% |
| ! | ACCAAAACATTTGCTAACAC+CGG | - | 51724:6442-6461 | None:intergenic | 35.0% |
| ! | ACCCTAGTGTTTCACATTTT+TGG | + | 51724:2693-2712 | MS.gene007011:intron | 35.0% |
| ! | AGCCTTGTGAATTGTGATTA+AGG | - | 51724:3842-3861 | None:intergenic | 35.0% |
| ! | CCTTAGCCTAATTTAAGGTT+CGG | - | 51724:6216-6235 | None:intergenic | 35.0% |
| ! | GAAAGTGTGAAATTGTTCGT+AGG | + | 51724:2099-2118 | MS.gene007011:CDS | 35.0% |
| ! | GACACAATTGTTGTTACTGT+GGG | + | 51724:3083-3102 | MS.gene007011:intron | 35.0% |
| ! | GAGGGAAAATAATTTGTGCT+TGG | - | 51724:4950-4969 | None:intergenic | 35.0% |
| ! | GCACAAATTATTTTCCCTCT+TGG | + | 51724:4951-4970 | MS.gene007011:intron | 35.0% |
| ! | GTGTTAACGGACATAACTTA+GGG | - | 51724:6027-6046 | None:intergenic | 35.0% |
| ! | GTTGAACCGCTTATTCTTTT+TGG | + | 51724:4149-4168 | MS.gene007011:intron | 35.0% |
| ! | GTTTTTGTTGACAAAGCTAC+CGG | + | 51724:6420-6439 | MS.gene007011:CDS | 35.0% |
| ! | TCAATAGTATCCGGCTTTTT+AGG | - | 51724:3308-3327 | None:intergenic | 35.0% |
| ! | TGACACAATTGTTGTTACTG+TGG | + | 51724:3082-3101 | MS.gene007011:intron | 35.0% |
| ! | TGATTTTCCCTTTCCAAACT+TGG | - | 51724:4709-4728 | None:intergenic | 35.0% |
| ! | TGTGTTAACGGACATAACTT+AGG | - | 51724:6028-6047 | None:intergenic | 35.0% |
| ! | TGTTAACGGACATAACTTAG+GGG | - | 51724:6026-6045 | None:intergenic | 35.0% |
| ! | TGTTTAGAACACTGAAGTGT+TGG | + | 51724:3358-3377 | MS.gene007011:intron | 35.0% |
| !! | TGTATCGTGTTAGTTCTACT+AGG | + | 51724:2840-2859 | MS.gene007011:intron | 35.0% |
| !!! | TAGGTTTCCATTTTGAGACA+GGG | - | 51724:4588-4607 | None:intergenic | 35.0% |
| !!! | TTAGGTTTCCATTTTGAGAC+AGG | - | 51724:4589-4608 | None:intergenic | 35.0% |
| !!! | TTTCATTTTTGGTAGTAGCC+AGG | + | 51724:4023-4042 | MS.gene007011:intron | 35.0% |
| AAAATTACTAAACGCACCCC+CGG | - | 51724:2421-2440 | None:intergenic | 40.0% | |
| ACAAACGCAACTTATCATGC+AGG | - | 51724:3254-3273 | None:intergenic | 40.0% | |
| ACAGTCTCAAGCTTCTAATG+TGG | + | 51724:5245-5264 | MS.gene007011:CDS | 40.0% | |
| AGAAAATGGACGGGGTTAAA+TGG | + | 51724:2792-2811 | MS.gene007011:intron | 40.0% | |
| AGTTGAAACCCTGACTAAGA+TGG | + | 51724:4333-4352 | MS.gene007011:intron | 40.0% | |
| ATCAGCCCATTTGACAACTA+AGG | - | 51724:5187-5206 | None:intergenic | 40.0% | |
| ATGAATGGATGCCAATTAGG+AGG | + | 51724:6589-6608 | MS.gene007011:CDS | 40.0% | |
| ATGATGCCTCACATGAATCA+AGG | + | 51724:5603-5622 | MS.gene007011:CDS | 40.0% | |
| ATGCACAACCTACTACAACA+TGG | - | 51724:3882-3901 | None:intergenic | 40.0% | |
| CAGTATATTGGACCTTCAAG+CGG | + | 51724:4468-4487 | MS.gene007011:intron | 40.0% | |
| CAGTCTCAAGCTTCTAATGT+GGG | + | 51724:5246-5265 | MS.gene007011:CDS | 40.0% | |
| CCGAACCTTAAATTAGGCTA+AGG | + | 51724:6213-6232 | MS.gene007011:intron | 40.0% | |
| GAATTGTGGTCTGGAAAACA+CGG | + | 51724:3059-3078 | MS.gene007011:intron | 40.0% | |
| GCACTCAAAACTCTACCAAA+TGG | - | 51724:6396-6415 | None:intergenic | 40.0% | |
| GCATTTCCTTGATTCATGTG+AGG | - | 51724:5612-5631 | None:intergenic | 40.0% | |
| GCTAATGCCTTTCAACCATT+TGG | + | 51724:6378-6397 | MS.gene007011:CDS | 40.0% | |
| GGTTCTCAACAGACAAGTAA+AGG | + | 51724:3765-3784 | MS.gene007011:CDS | 40.0% | |
| GTCCTATACAAGCCATTGTA+GGG | - | 51724:4625-4644 | None:intergenic | 40.0% | |
| GTGAAACACTAGGGTATATG+GGG | - | 51724:2688-2707 | None:intergenic | 40.0% | |
| GTGTTCCCTTAGTTGTCAAA+TGG | + | 51724:5178-5197 | MS.gene007011:CDS | 40.0% | |
| GTTCCTCCATATAACGGTTA+TGG | + | 51724:5318-5337 | MS.gene007011:CDS | 40.0% | |
| GTTCCTTGTATGTGGTAGAA+TGG | + | 51724:4393-4412 | MS.gene007011:intron | 40.0% | |
| TAGATAAACAGATTTGCGCC+AGG | - | 51724:6324-6343 | None:intergenic | 40.0% | |
| TAGCCATAACCGTTATATGG+AGG | - | 51724:5324-5343 | None:intergenic | 40.0% | |
| TATGGAGGAACATAACCCAT+AGG | - | 51724:5309-5328 | None:intergenic | 40.0% | |
| TCAGCCCATTTGACAACTAA+GGG | - | 51724:5186-5205 | None:intergenic | 40.0% | |
| TCATCTTCCGTCATGTGTTT+CGG | - | 51724:2132-2151 | None:intergenic | 40.0% | |
| TCTCCATTCTACCACATACA+AGG | - | 51724:4399-4418 | None:intergenic | 40.0% | |
| TCTGCATACTTCACTTGCAA+TGG | - | 51724:3482-3501 | None:intergenic | 40.0% | |
| TGAAACACTAGGGTATATGG+GGG | - | 51724:2687-2706 | None:intergenic | 40.0% | |
| TGGTCCCTTAGCCTAATTTA+AGG | - | 51724:6221-6240 | None:intergenic | 40.0% | |
| TGTCCTATACAAGCCATTGT+AGG | - | 51724:4626-4645 | None:intergenic | 40.0% | |
| TTGAATGGACGACAGTACTA+TGG | - | 51724:5418-5437 | None:intergenic | 40.0% | |
| TTGACTGAAACAGTGCACAA+AGG | - | 51724:4824-4843 | None:intergenic | 40.0% | |
| TTGCAAGTGAAGTATGCAGA+TGG | + | 51724:3482-3501 | MS.gene007011:CDS | 40.0% | |
| ! | ATTATTTGGAGCCATGCCTA+TGG | + | 51724:5290-5309 | MS.gene007011:CDS | 40.0% |
| ! | ATTTTCTCTTGATAGGCTCC+TGG | + | 51724:5516-5535 | MS.gene007011:intron | 40.0% |
| ! | CAATGGAAAGCACAAAATGG+AGG | + | 51724:3951-3970 | MS.gene007011:CDS | 40.0% |
| ! | CAGTGTTCTAAACAAAGCCT+TGG | - | 51724:3352-3371 | None:intergenic | 40.0% |
| ! | GATGAGAGCTCTCATTTTCA+GGG | + | 51724:6518-6537 | MS.gene007011:intron | 40.0% |
| ! | GCCTAATTTAAGGTTCGGTT+TGG | - | 51724:6211-6230 | None:intergenic | 40.0% |
| ! | TAAGAGCCAACATAACTTGC+AGG | - | 51724:5687-5706 | None:intergenic | 40.0% |
| ! | TAAGTTTAGTGGCGGAATTG+TGG | + | 51724:3045-3064 | MS.gene007011:intron | 40.0% |
| ! | TATTTTCACTTAGGACCACC+TGG | + | 51724:6303-6322 | MS.gene007011:intron | 40.0% |
| ! | TCATGTGAGGCATCATATTG+TGG | - | 51724:5599-5618 | None:intergenic | 40.0% |
| ! | TCTGCACTTTTCTCCAAGTA+TGG | + | 51724:3714-3733 | MS.gene007011:CDS | 40.0% |
| ! | TGATGAGAGCTCTCATTTTC+AGG | + | 51724:6517-6536 | MS.gene007011:intron | 40.0% |
| ! | TTATTTGGAGCCATGCCTAT+GGG | + | 51724:5291-5310 | MS.gene007011:CDS | 40.0% |
| ! | TTCCCTACAATGGCTTGTAT+AGG | + | 51724:4620-4639 | MS.gene007011:intron | 40.0% |
| ! | TTCTAGAGATGAAGCCGATA+AGG | + | 51724:2363-2382 | MS.gene007011:CDS | 40.0% |
| !! | ACCGGTGTTAGCAAATGTTT+TGG | + | 51724:6438-6457 | MS.gene007011:CDS | 40.0% |
| !! | CAAATGGGCTGATACTGAAA+AGG | + | 51724:5194-5213 | MS.gene007011:CDS | 40.0% |
| !! | TAACCAGGTTGATTCTGCAT+TGG | - | 51724:5576-5595 | None:intergenic | 40.0% |
| !! | TCAAGTACCGAAACACATGA+CGG | + | 51724:2122-2141 | MS.gene007011:CDS | 40.0% |
| !! | TGAAGACTAGTTTGCCAAGA+GGG | - | 51724:4968-4987 | None:intergenic | 40.0% |
| !! | TTATCGGCTTCATCTCTAGA+AGG | - | 51724:2364-2383 | None:intergenic | 40.0% |
| !!! | TGCTTTTGGTTCCTTGTATG+TGG | + | 51724:4385-4404 | MS.gene007011:intron | 40.0% |
| AAAATGGAGCGTGGCCTATA+TGG | - | 51724:3215-3234 | None:intergenic | 45.0% | |
| AACGGTGTTTGTGCCAGTTT+AGG | - | 51724:6141-6160 | None:intergenic | 45.0% | |
| ACGGTGTTTGTGCCAGTTTA+GGG | - | 51724:6140-6159 | None:intergenic | 45.0% | |
| ACTGTGCTTTCTGAGCTCTT+CGG | - | 51724:5230-5249 | None:intergenic | 45.0% | |
| AGACCTTTGAATAGTCCTCC+TGG | + | 51724:5765-5784 | MS.gene007011:CDS | 45.0% | |
| AGGAACATAACCCATAGGCA+TGG | - | 51724:5304-5323 | None:intergenic | 45.0% | |
| ATAAACAGATTTGCGCCAGG+TGG | - | 51724:6321-6340 | None:intergenic | 45.0% | |
| ATAGCAGATTGAGCAGCTTC+TGG | - | 51724:6562-6581 | None:intergenic | 45.0% | |
| ATTCCTCCAGGATATGCCAT+TGG | - | 51724:5735-5754 | None:intergenic | 45.0% | |
| CAACATCCAATGGCATATCC+TGG | + | 51724:5726-5745 | MS.gene007011:CDS | 45.0% | |
| CATAAGAGGGACAACAAACC+CGG | + | 51724:6631-6650 | MS.gene007011:CDS | 45.0% | |
| CCTGACTAAGATGGCATGAA+CGG | + | 51724:4342-4361 | MS.gene007011:intron | 45.0% | |
| CGTTCATGCCATCTTAGTCA+GGG | - | 51724:4344-4363 | None:intergenic | 45.0% | |
| CTTGGACTAATCATTCCTCC+AGG | - | 51724:5747-5766 | None:intergenic | 45.0% | |
| GAACCAGGAGGACTATTCAA+AGG | - | 51724:5771-5790 | None:intergenic | 45.0% | |
| GATAGGCTCCTGGAAGTTAT+GGG | + | 51724:5526-5545 | MS.gene007011:intron | 45.0% | |
| GCACAAAGGTTTGTGTGCAT+GGG | - | 51724:4810-4829 | None:intergenic | 45.0% | |
| GCTCGAACTTGATCCAAGTT+TGG | + | 51724:4693-4712 | MS.gene007011:intron | 45.0% | |
| GGAAAGGGAAAATCAAGCTC+TGG | + | 51724:4714-4733 | MS.gene007011:intron | 45.0% | |
| GGAGGACTATTCAAAGGTCT+TGG | - | 51724:5765-5784 | None:intergenic | 45.0% | |
| GGCATCATATTGTGGTAACC+AGG | - | 51724:5591-5610 | None:intergenic | 45.0% | |
| GGCATGGCTCCAAATAATGA+AGG | - | 51724:5288-5307 | None:intergenic | 45.0% | |
| TAACTGGCAGGTGTCCATAT+AGG | + | 51724:3198-3217 | MS.gene007011:intron | 45.0% | |
| TAGCAGATTGAGCAGCTTCT+GGG | - | 51724:6561-6580 | None:intergenic | 45.0% | |
| TAGGACATTGTTCCACACCT+AGG | + | 51724:4639-4658 | MS.gene007011:intron | 45.0% | |
| TAGGGAACAAACCCACCATT+AGG | - | 51724:4607-4626 | None:intergenic | 45.0% | |
| TCAGGGTCCAGCAAAAATTC+TGG | + | 51724:5831-5850 | MS.gene007011:CDS | 45.0% | |
| TCCAGCAAAAATTCTGGTGG+TGG | + | 51724:5837-5856 | MS.gene007011:CDS | 45.0% | |
| TGATAGGCTCCTGGAAGTTA+TGG | + | 51724:5525-5544 | MS.gene007011:intron | 45.0% | |
| TGCACAAAGGTTTGTGTGCA+TGG | - | 51724:4811-4830 | None:intergenic | 45.0% | |
| TGTCTTGTGTTTGCATGACC+TGG | + | 51724:5035-5054 | MS.gene007011:intron | 45.0% | |
| ! | ACACGCATTAACGGCCTTAT+CGG | - | 51724:2380-2399 | None:intergenic | 45.0% |
| ! | ACCACCACCAGAATTTTTGC+TGG | - | 51724:5841-5860 | None:intergenic | 45.0% |
| ! | AGAACAAGCTCTTGCTGCTT+TGG | + | 51724:3921-3940 | MS.gene007011:CDS | 45.0% |
| ! | AGCAGCAAGAGCTTGTTCTT+TGG | - | 51724:3920-3939 | None:intergenic | 45.0% |
| ! | GATGGCGAGTTGGAAAGATT+AGG | + | 51724:3500-3519 | MS.gene007011:CDS | 45.0% |
| ! | GGAAAGCACAAAATGGAGGT+TGG | + | 51724:3955-3974 | MS.gene007011:intron | 45.0% |
| ! | GGAGGCACATGATAGTTTCT+AGG | - | 51724:5666-5685 | None:intergenic | 45.0% |
| ! | TAACGGGTAAAACCTAGGTG+TGG | - | 51724:4654-4673 | None:intergenic | 45.0% |
| !! | CGTGTTAGTTCTACTAGGCT+GGG | + | 51724:2845-2864 | MS.gene007011:intron | 45.0% |
| !! | GCTGTTAACTAGTGCTGATG+TGG | + | 51724:6077-6096 | MS.gene007011:intron | 45.0% |
| !! | GTGAAGACTAGTTTGCCAAG+AGG | - | 51724:4969-4988 | None:intergenic | 45.0% |
| !! | TCGTGTTAGTTCTACTAGGC+TGG | + | 51724:2844-2863 | MS.gene007011:intron | 45.0% |
| AATGCATTGCGGCCAGATCT+CGG | + | 51724:5627-5646 | MS.gene007011:CDS | 50.0% | |
| AGCAGATTGAGCAGCTTCTG+GGG | - | 51724:6560-6579 | None:intergenic | 50.0% | |
| ATAGAAGGCAAGTGGGCAAC+AGG | + | 51724:4127-4146 | MS.gene007011:intron | 50.0% | |
| CATCCAATGGCATATCCTGG+AGG | + | 51724:5729-5748 | MS.gene007011:CDS | 50.0% | |
| CCACCAATGCAGAATCAACC+TGG | + | 51724:5570-5589 | MS.gene007011:CDS | 50.0% | |
| CCGTTCATGCCATCTTAGTC+AGG | - | 51724:4345-4364 | None:intergenic | 50.0% | |
| CTGTGCTTTCTGAGCTCTTC+GGG | - | 51724:5229-5248 | None:intergenic | 50.0% | |
| GAAGGTGAAACAGAACCAGG+AGG | - | 51724:5783-5802 | None:intergenic | 50.0% | |
| GAAGTATGCAGATGGCGAGT+TGG | + | 51724:3490-3509 | MS.gene007011:CDS | 50.0% | |
| GCAACTCCGCTACATCATCA+GGG | + | 51724:5814-5833 | MS.gene007011:CDS | 50.0% | |
| GCCAGGGTTACAACATCCAA+TGG | + | 51724:5716-5735 | MS.gene007011:CDS | 50.0% | |
| GCCATTGGATGTTGTAACCC+TGG | - | 51724:5720-5739 | None:intergenic | 50.0% | |
| GGGTCCAGCAAAAATTCTGG+TGG | + | 51724:5834-5853 | MS.gene007011:CDS | 50.0% | |
| GTGCCTCCTGCAAGTTATGT+TGG | + | 51724:5678-5697 | MS.gene007011:CDS | 50.0% | |
| GTTTCACCTTCCGGTGGAAA+TGG | + | 51724:5792-5811 | MS.gene007011:CDS | 50.0% | |
| TTCATATTGGGGCCGAGATC+TGG | - | 51724:5642-5661 | None:intergenic | 50.0% | |
| ! | GAGCCAACATAACTTGCAGG+AGG | - | 51724:5684-5703 | None:intergenic | 50.0% |
| ! | GGTGGGTTTGTTCCCTACAA+TGG | + | 51724:4610-4629 | MS.gene007011:intron | 50.0% |
| ! | GGTTGATTCTGCATTGGTGG+CGG | - | 51724:5570-5589 | None:intergenic | 50.0% |
| ! | TGTGACTGAATGCCGCTTGA+AGG | - | 51724:4483-4502 | None:intergenic | 50.0% |
| ! | TTAGTGGCGGAATTGTGGTC+TGG | + | 51724:3050-3069 | MS.gene007011:intron | 50.0% |
| !! | ACAAGCTCTTGCTGCTTTGG+AGG | + | 51724:3924-3943 | MS.gene007011:CDS | 50.0% |
| !! | CCAGGTTGATTCTGCATTGG+TGG | - | 51724:5573-5592 | None:intergenic | 50.0% |
| !! | CCTGGTTCTGTTTCACCTTC+CGG | + | 51724:5783-5802 | MS.gene007011:CDS | 50.0% |
| !! | GCTGCTTTGGAGGCAATCAA+TGG | + | 51724:3934-3953 | MS.gene007011:CDS | 50.0% |
| AAAGCTACACGCGCTTCTCG+AGG | + | 51724:2210-2229 | MS.gene007011:CDS | 55.0% | |
| CCGGAAGGTGAAACAGAACC+AGG | - | 51724:5786-5805 | None:intergenic | 55.0% | |
| GCTCTTATCCTGCTGTGCCA+GGG | + | 51724:5700-5719 | MS.gene007011:CDS | 55.0% | |
| GGCAACTCCGCTACATCATC+AGG | + | 51724:5813-5832 | MS.gene007011:CDS | 55.0% | |
| GGCATGAGCCCATAACTTCC+AGG | - | 51724:5537-5556 | None:intergenic | 55.0% | |
| GGTTCTGTTTCACCTTCCGG+TGG | + | 51724:5786-5805 | MS.gene007011:CDS | 55.0% | |
| TGTTGTAACCCTGGCACAGC+AGG | - | 51724:5711-5730 | None:intergenic | 55.0% | |
| ! | AGCGGAGTTGCCATTTCCAC+CGG | - | 51724:5805-5824 | None:intergenic | 55.0% |
| ! | GAGTTGCCATTTCCACCGGA+AGG | - | 51724:5801-5820 | None:intergenic | 55.0% |
| ! | GCTGGACCCTGATGATGTAG+CGG | - | 51724:5823-5842 | None:intergenic | 55.0% |
| !! | TCTGGTGGTGGTCAAGCTGA+AGG | + | 51724:5849-5868 | MS.gene007011:CDS | 55.0% |
| GGCTCTTATCCTGCTGTGCC+AGG | + | 51724:5699-5718 | MS.gene007011:CDS | 60.0% | |
| !! | ATTGGTGGCGGCATGCGGTA+CGG | - | 51724:5558-5577 | None:intergenic | 60.0% |
| !! | TCTGCATTGGTGGCGGCATG+CGG | - | 51724:5563-5582 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51724 | gene | 2060 | 6666 | 2060 | ID=MS.gene007011 |
| 51724 | mRNA | 2060 | 6666 | 2060 | ID=MS.gene007011.t1;Parent=MS.gene007011 |
| 51724 | exon | 2060 | 2231 | 2060 | ID=MS.gene007011.t1.exon1;Parent=MS.gene007011.t1 |
| 51724 | CDS | 2060 | 2231 | 2060 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| 51724 | exon | 2341 | 2423 | 2341 | ID=MS.gene007011.t1.exon2;Parent=MS.gene007011.t1 |
| 51724 | CDS | 2341 | 2423 | 2341 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| 51724 | exon | 3470 | 3521 | 3470 | ID=MS.gene007011.t1.exon3;Parent=MS.gene007011.t1 |
| 51724 | CDS | 3470 | 3521 | 3470 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| 51724 | exon | 3661 | 3786 | 3661 | ID=MS.gene007011.t1.exon4;Parent=MS.gene007011.t1 |
| 51724 | CDS | 3661 | 3786 | 3661 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| 51724 | exon | 3890 | 3972 | 3890 | ID=MS.gene007011.t1.exon5;Parent=MS.gene007011.t1 |
| 51724 | CDS | 3890 | 3972 | 3890 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| 51724 | exon | 5171 | 5347 | 5171 | ID=MS.gene007011.t1.exon6;Parent=MS.gene007011.t1 |
| 51724 | CDS | 5171 | 5347 | 5171 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| 51724 | exon | 5531 | 5870 | 5531 | ID=MS.gene007011.t1.exon7;Parent=MS.gene007011.t1 |
| 51724 | CDS | 5531 | 5870 | 5531 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| 51724 | exon | 6316 | 6459 | 6316 | ID=MS.gene007011.t1.exon8;Parent=MS.gene007011.t1 |
| 51724 | CDS | 6316 | 6459 | 6316 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| 51724 | exon | 6539 | 6666 | 6539 | ID=MS.gene007011.t1.exon9;Parent=MS.gene007011.t1 |
| 51724 | CDS | 6539 | 6666 | 6539 | ID=cds.MS.gene007011.t1;Parent=MS.gene007011.t1 |
| Gene Sequence |
| Protein sequence |
