Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008080.t1 | XP_003600862.1 | 98.3 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 1.80E-155 | 558.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008080.t1 | O04202 | 75.9 | 291 | 66 | 1 | 2 | 288 | 3 | 293 | 2.3e-127 | 456.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008080.t1 | B7FK44 | 98.3 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 1.3e-155 | 558.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008080 | MS.gene29607 | PPI |
| MS.gene008080 | MS.gene008081 | PPI |
| MS.gene008080 | MS.gene031999 | PPI |
| MS.gene008080 | MS.gene014112 | PPI |
| MS.gene008080 | MS.gene018309 | PPI |
| MS.gene008080 | MS.gene39043 | PPI |
| MS.gene008080 | MS.gene69251 | PPI |
| MS.gene008080 | MS.gene86150 | PPI |
| MS.gene008080 | MS.gene018310 | PPI |
| MS.gene008080 | MS.gene42526 | PPI |
| MS.gene008080 | MS.gene80661 | PPI |
| MS.gene008080 | MS.gene017884 | PPI |
| MS.gene008080 | MS.gene057320 | PPI |
| MS.gene008080 | MS.gene37293 | PPI |
| MS.gene008080 | MS.gene56675 | PPI |
| MS.gene008080 | MS.gene80790 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008080.t1 | MTR_3g070190 | 98.264 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 0.0 | 583 |
| MS.gene008080.t1 | MTR_5g082000 | 88.542 | 288 | 29 | 1 | 1 | 288 | 1 | 284 | 0.0 | 520 |
| MS.gene008080.t1 | MTR_3g070180 | 33.096 | 281 | 170 | 7 | 17 | 283 | 10 | 286 | 1.29e-34 | 127 |
| MS.gene008080.t1 | MTR_5g081980 | 32.841 | 271 | 165 | 6 | 25 | 282 | 19 | 285 | 2.11e-34 | 127 |
| MS.gene008080.t1 | MTR_5g082010 | 38.514 | 148 | 33 | 4 | 74 | 221 | 5 | 94 | 1.02e-18 | 79.7 |
| MS.gene008080.t1 | MTR_3g009270 | 23.948 | 309 | 191 | 7 | 14 | 284 | 2 | 304 | 7.37e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008080.t1 | AT2G39990 | 75.945 | 291 | 66 | 1 | 2 | 288 | 3 | 293 | 1.95e-160 | 448 |
| MS.gene008080.t1 | AT3G11270 | 32.979 | 282 | 169 | 7 | 17 | 282 | 5 | 282 | 1.77e-36 | 132 |
| MS.gene008080.t1 | AT3G11270 | 32.632 | 285 | 169 | 7 | 17 | 282 | 5 | 285 | 4.67e-36 | 131 |
| MS.gene008080.t1 | AT5G05780 | 31.560 | 282 | 173 | 7 | 17 | 282 | 5 | 282 | 1.30e-33 | 125 |
| MS.gene008080.t1 | AT5G05780 | 31.228 | 285 | 173 | 7 | 17 | 282 | 5 | 285 | 3.29e-33 | 124 |
| MS.gene008080.t1 | AT4G26430 | 24.342 | 304 | 191 | 7 | 16 | 284 | 4 | 303 | 2.20e-13 | 69.7 |
| MS.gene008080.t1 | AT5G56280 | 24.752 | 303 | 191 | 7 | 16 | 284 | 4 | 303 | 1.46e-12 | 67.4 |
Find 60 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGTCATTGGAACGCTTCT+TGG | 0.210700 | 3.3:-61406519 | MS.gene008080:CDS |
| GTTGCACCAGACAACAAAAT+TGG | 0.229921 | 3.3:-61401933 | MS.gene008080:CDS |
| ACAGTCAGAATTACAAAATC+TGG | 0.275877 | 3.3:+61401577 | None:intergenic |
| TGTCAACAGTGGTTGCCTTT+AGG | 0.305583 | 3.3:+61402128 | None:intergenic |
| GTTTGACACATAAGCTTTGA+TGG | 0.319915 | 3.3:+61402869 | None:intergenic |
| CTTGGATCTGTTCTTCCTGA+TGG | 0.343100 | 3.3:-61406501 | MS.gene008080:CDS |
| GCTTGTGAACGACAGCTTAC+AGG | 0.343421 | 3.3:-61401850 | MS.gene008080:intron |
| TCAACTGGACTTGGAGTAAC+TGG | 0.372693 | 3.3:-61402984 | MS.gene008080:CDS |
| GTGTCAAACAATTTATCTCT+TGG | 0.383210 | 3.3:-61402855 | MS.gene008080:CDS |
| TATTTATGCAGGTATTCAAC+TGG | 0.393038 | 3.3:-61402999 | MS.gene008080:intron |
| ATTCATTTGACTGTTGATAC+AGG | 0.396286 | 3.3:-61402912 | MS.gene008080:CDS |
| GATCAAGCTGAACGCGTCAT+TGG | 0.409335 | 3.3:-61406531 | MS.gene008080:CDS |
| AACAGTCAAATGAATGGGAT+TGG | 0.410536 | 3.3:+61402920 | None:intergenic |
| TGCAGGTATTCAACTGGACT+TGG | 0.422441 | 3.3:-61402993 | MS.gene008080:intron |
| AAAATCCCCTCTGACTTAGA+AGG | 0.446924 | 3.3:-61402106 | MS.gene008080:CDS |
| AGAAGGCATGGAAGCATCAA+TGG | 0.461890 | 3.3:-61402089 | MS.gene008080:CDS |
| AATCAAAAGGAAGTCATAGT+TGG | 0.465079 | 3.3:-61403481 | MS.gene008080:CDS |
| TGTATCAACAGTCAAATGAA+TGG | 0.465420 | 3.3:+61402914 | None:intergenic |
| TTGCACCAGACAACAAAATT+GGG | 0.482472 | 3.3:-61401932 | MS.gene008080:CDS |
| ATGGTTGAAGCTGAGCGAAT+TGG | 0.484794 | 3.3:-61402783 | MS.gene008080:CDS |
| TCACAATGAATCCATTGATC+AGG | 0.486833 | 3.3:-61406445 | MS.gene008080:intron |
| GAGGAACAGCATATGAATTA+CGG | 0.486958 | 3.3:+61406466 | None:intergenic |
| ACAATTTATCTCTTGGAGAC+AGG | 0.488454 | 3.3:-61402848 | MS.gene008080:CDS |
| ACAGTCAAATGAATGGGATT+GGG | 0.491042 | 3.3:+61402921 | None:intergenic |
| CGAGGGAAGGACCTGATCAA+TGG | 0.491179 | 3.3:+61406434 | None:intergenic |
| TTCTCAGAGCTTATCCGCTA+AGG | 0.495822 | 3.3:-61406604 | MS.gene008080:CDS |
| GTATCAACAGTCAAATGAAT+GGG | 0.496605 | 3.3:+61402915 | None:intergenic |
| CGGATATCAACAGTTCCATC+AGG | 0.497957 | 3.3:+61406486 | None:intergenic |
| CCCCTCTGACTTAGAAGGCA+TGG | 0.501688 | 3.3:-61402101 | MS.gene008080:CDS |
| GTTGATACAGGATTCACAAC+TGG | 0.502330 | 3.3:-61402900 | MS.gene008080:CDS |
| ATGACGCGTTCAGCTTGATC+AGG | 0.505348 | 3.3:+61406534 | None:intergenic |
| CACAAGAACTCAACTTAGCT+TGG | 0.506158 | 3.3:-61401622 | MS.gene008080:CDS |
| ACAAGCTTATCAAAATCAGA+TGG | 0.513873 | 3.3:+61401867 | None:intergenic |
| CAAGCTTATCAAAATCAGAT+GGG | 0.536179 | 3.3:+61401868 | None:intergenic |
| AATTCCACTGGATCTTCGTA+TGG | 0.540296 | 3.3:-61402802 | MS.gene008080:CDS |
| CTTCTCGAGAATAAAACTCA+TGG | 0.540683 | 3.3:+61402946 | None:intergenic |
| CAGTCAGAATTACAAAATCT+GGG | 0.544157 | 3.3:+61401578 | None:intergenic |
| GTTTCAGGATCACTTGCTCA+TGG | 0.545819 | 3.3:-61401661 | MS.gene008080:intron |
| AATGTCAGTTGATATCCTAA+AGG | 0.558985 | 3.3:-61402143 | MS.gene008080:intron |
| GGGACAACAACATATTATGA+TGG | 0.564682 | 3.3:+61403515 | None:intergenic |
| GAATTGCAACACTGTGCGAT+TGG | 0.579767 | 3.3:+61406644 | None:intergenic |
| TCCATGCCTTCTAAGTCAGA+GGG | 0.582710 | 3.3:+61402100 | None:intergenic |
| CAAATATGTTGATGATGTTG+TGG | 0.594015 | 3.3:-61402035 | MS.gene008080:intron |
| AAAAGGAAGTCATAGTTGGA+TGG | 0.597430 | 3.3:-61403477 | MS.gene008080:intron |
| AGCGGATAAGCTCTGAGAAG+AGG | 0.597938 | 3.3:+61406608 | None:intergenic |
| TTCCATGCCTTCTAAGTCAG+AGG | 0.599344 | 3.3:+61402099 | None:intergenic |
| GACGAGAGGATGAACCTTAG+CGG | 0.606488 | 3.3:+61406590 | None:intergenic |
| ACAGGATTCACAACTGGAGG+GGG | 0.607665 | 3.3:-61402894 | MS.gene008080:CDS |
| AAATTTATATCAGATGCAGT+AGG | 0.618068 | 3.3:-61401909 | MS.gene008080:CDS |
| GATACAGGATTCACAACTGG+AGG | 0.619089 | 3.3:-61402897 | MS.gene008080:CDS |
| ACTGGACTTGGAGTAACTGG+TGG | 0.625290 | 3.3:-61402981 | MS.gene008080:CDS |
| TACAGGATTCACAACTGGAG+GGG | 0.630808 | 3.3:-61402895 | MS.gene008080:CDS |
| ACAGTTTCAAGAAATTCCAC+TGG | 0.631890 | 3.3:-61402814 | MS.gene008080:CDS |
| AAGCTTATCAAAATCAGATG+GGG | 0.633795 | 3.3:+61401869 | None:intergenic |
| TGATCAATGGATTCATTGTG+AGG | 0.635583 | 3.3:+61406447 | None:intergenic |
| ATACAGGATTCACAACTGGA+GGG | 0.659687 | 3.3:-61402896 | MS.gene008080:CDS |
| AGCTTATCAAAATCAGATGG+GGG | 0.668310 | 3.3:+61401870 | None:intergenic |
| CAGATGTTGAATACGACGAG+AGG | 0.671951 | 3.3:+61406576 | None:intergenic |
| CCATGCCTTCTAAGTCAGAG+GGG | 0.694607 | 3.3:+61402101 | None:intergenic |
| TCAACCATACGAAGATCCAG+TGG | 0.695781 | 3.3:+61402798 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCATTAAAAATCAATATT+TGG | + | chr3.3:61406052-61406071 | None:intergenic | 10.0% |
| !! | TTTGTGAAAATATTAAATTA+AGG | - | chr3.3:61406021-61406040 | MS.gene008080:intron | 10.0% |
| !!! | TTGTATTGATAAAAAAAAAT+AGG | - | chr3.3:61403117-61403136 | MS.gene008080:intron | 10.0% |
| !!! | TTTTAAATGAAAGAAAAAAA+TGG | + | chr3.3:61403980-61403999 | None:intergenic | 10.0% |
| !! | GTTGTATTTATAAATATGAT+AGG | - | chr3.3:61401972-61401991 | MS.gene008080:intron | 15.0% |
| !! | TAATAGATTTATTTATGTCT+TGG | - | chr3.3:61403046-61403065 | MS.gene008080:intron | 15.0% |
| !! | TATTTATAAATATGATAGGA+GGG | - | chr3.3:61401976-61401995 | MS.gene008080:intron | 15.0% |
| !! | TGGTTAATATTAATATGAAA+TGG | - | chr3.3:61405042-61405061 | MS.gene008080:intron | 15.0% |
| !!! | TTTGCTTATTGTTTTTAAAA+CGG | - | chr3.3:61404046-61404065 | MS.gene008080:intron | 15.0% |
| !! | AAAGTAAATACTTATCTCAT+CGG | - | chr3.3:61403939-61403958 | MS.gene008080:intron | 20.0% |
| !! | AAATAATCAAAGTTTACACA+AGG | + | chr3.3:61405227-61405246 | None:intergenic | 20.0% |
| !! | AATAATCAAAGTTTACACAA+GGG | + | chr3.3:61405226-61405245 | None:intergenic | 20.0% |
| !! | ATATTAATATACAAATGGAC+TGG | - | chr3.3:61405132-61405151 | MS.gene008080:intron | 20.0% |
| !! | ATCACATATTAAAATGTAGA+TGG | + | chr3.3:61401836-61401855 | None:intergenic | 20.0% |
| !! | GTATTTATAAATATGATAGG+AGG | - | chr3.3:61401975-61401994 | MS.gene008080:intron | 20.0% |
| !! | GTTTATTGATATCTAATTAG+AGG | - | chr3.3:61404369-61404388 | MS.gene008080:intron | 20.0% |
| !! | TAAACTTTGATTATTTATGC+AGG | - | chr3.3:61405231-61405250 | MS.gene008080:intron | 20.0% |
| !! | TATAAGAGAAACTATTAAGA+AGG | - | chr3.3:61403437-61403456 | MS.gene008080:intron | 20.0% |
| !! | TGGTTAATATTAATACGAAA+TGG | - | chr3.3:61405084-61405103 | MS.gene008080:intron | 20.0% |
| !!! | AAAAGCTAAGACTTTAAAAT+AGG | + | chr3.3:61405631-61405650 | None:intergenic | 20.0% |
| !!! | ATAATTGTGAACTTTTTGTT+TGG | - | chr3.3:61401930-61401949 | MS.gene008080:CDS | 20.0% |
| !!! | ATTGAATTTTTGTCTAGATA+AGG | - | chr3.3:61402851-61402870 | MS.gene008080:CDS | 20.0% |
| !!! | CATTTGTTTTATATACCAAT+GGG | + | chr3.3:61405002-61405021 | None:intergenic | 20.0% |
| !!! | CTTAGCTTTTAATTATGTAA+TGG | - | chr3.3:61405641-61405660 | MS.gene008080:intron | 20.0% |
| !!! | GGTTGATATTAATATACAAA+TGG | - | chr3.3:61405127-61405146 | MS.gene008080:intron | 20.0% |
| !!! | TAGTTGAAATTTTAACAGAA+TGG | + | chr3.3:61402112-61402131 | None:intergenic | 20.0% |
| !!! | TCAAACTCAGAATTTTTTTT+TGG | + | chr3.3:61403857-61403876 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTTGTTGTAATTA+TGG | - | chr3.3:61403562-61403581 | MS.gene008080:intron | 20.0% |
| !!! | TTAGCTGTAACTTTTTTTAT+GGG | - | chr3.3:61404972-61404991 | MS.gene008080:intron | 20.0% |
| !!! | TTGAATTTTTGTCTAGATAA+GGG | - | chr3.3:61402852-61402871 | MS.gene008080:CDS | 20.0% |
| !!! | TTGCTTATTGTTTTTAAAAC+GGG | - | chr3.3:61404047-61404066 | MS.gene008080:intron | 20.0% |
| !!! | TTTAGCTGTAACTTTTTTTA+TGG | - | chr3.3:61404971-61404990 | MS.gene008080:intron | 20.0% |
| ! | AAACAAGTCTATATACAGTA+TGG | + | chr3.3:61405860-61405879 | None:intergenic | 25.0% |
| ! | AAATTTATATCAGATGCAGT+AGG | - | chr3.3:61406332-61406351 | MS.gene008080:intron | 25.0% |
| ! | AACAAAAACTTCAGGAATTT+AGG | + | chr3.3:61402825-61402844 | None:intergenic | 25.0% |
| ! | AACATTTACAGTTCTTTGTT+GGG | - | chr3.3:61405687-61405706 | MS.gene008080:intron | 25.0% |
| ! | AAGAGAAAATATGAATGAGT+TGG | - | chr3.3:61402296-61402315 | MS.gene008080:intron | 25.0% |
| ! | AATACGAAATGGTTTCTTTA+GGG | - | chr3.3:61405095-61405114 | MS.gene008080:intron | 25.0% |
| ! | ACATATTAAAATGTAGATGG+AGG | + | chr3.3:61401833-61401852 | None:intergenic | 25.0% |
| ! | ATAAAATAGTGTCAAAGATG+TGG | + | chr3.3:61405799-61405818 | None:intergenic | 25.0% |
| ! | ATAAGATGAACAAAAACTTC+AGG | + | chr3.3:61402833-61402852 | None:intergenic | 25.0% |
| ! | ATACAACAATATCCTTACTT+TGG | + | chr3.3:61401959-61401978 | None:intergenic | 25.0% |
| ! | CCATTGGTATATAAAACAAA+TGG | - | chr3.3:61405000-61405019 | MS.gene008080:intron | 25.0% |
| ! | CTTAAAAGAATCAGATAAGA+GGG | - | chr3.3:61403219-61403238 | MS.gene008080:intron | 25.0% |
| ! | GAAGGAAGAAAAATTATTAC+AGG | + | chr3.3:61402970-61402989 | None:intergenic | 25.0% |
| ! | GGATCTAGATATTAATGAAT+TGG | - | chr3.3:61403458-61403477 | MS.gene008080:intron | 25.0% |
| ! | TAAAAAAAAATAGGAGCGAA+TGG | - | chr3.3:61403126-61403145 | MS.gene008080:intron | 25.0% |
| ! | TAATACGAAATGGTTTCTTT+AGG | - | chr3.3:61405094-61405113 | MS.gene008080:intron | 25.0% |
| ! | TATCACTTTATTGTTTCCAT+TGG | - | chr3.3:61405899-61405918 | MS.gene008080:intron | 25.0% |
| ! | TTCTGAACAAACACTTATAA+AGG | - | chr3.3:61402551-61402570 | MS.gene008080:intron | 25.0% |
| !! | AAATAGATTTGCTCATGTAA+TGG | - | chr3.3:61402575-61402594 | MS.gene008080:intron | 25.0% |
| !! | AGAGTTGTAATTTTCACAAA+TGG | + | chr3.3:61403257-61403276 | None:intergenic | 25.0% |
| !! | ATTGATTAATTTTTCATCGC+AGG | - | chr3.3:61406277-61406296 | MS.gene008080:intron | 25.0% |
| !! | CTTTCAAACTCAAGAAATTT+TGG | + | chr3.3:61403923-61403942 | None:intergenic | 25.0% |
| !! | GACAAATAAAGCTTTATAGA+GGG | + | chr3.3:61405551-61405570 | None:intergenic | 25.0% |
| !! | TACAAACTCAGAAGAAATTT+TGG | + | chr3.3:61402713-61402732 | None:intergenic | 25.0% |
| !! | TGACAAATAAAGCTTTATAG+AGG | + | chr3.3:61405552-61405571 | None:intergenic | 25.0% |
| !! | TGGTTTTTGACATATTACTA+TGG | - | chr3.3:61403490-61403509 | MS.gene008080:CDS | 25.0% |
| !! | TTTTCTCTTATAGCTTATCT+AGG | + | chr3.3:61402285-61402304 | None:intergenic | 25.0% |
| !!! | AATTGGATGTAAGTATTGAT+TGG | - | chr3.3:61405475-61405494 | MS.gene008080:intron | 25.0% |
| !!! | AGTTTTGACTTTGATTGATA+AGG | - | chr3.3:61404501-61404520 | MS.gene008080:intron | 25.0% |
| !!! | CCATTTGTTTTATATACCAA+TGG | + | chr3.3:61405003-61405022 | None:intergenic | 25.0% |
| !!! | CTAATTAGAGGTACTTTTTT+AGG | - | chr3.3:61404381-61404400 | MS.gene008080:intron | 25.0% |
| !!! | TTTTAAAAGAGTTCCAAGTA+CGG | + | chr3.3:61402652-61402671 | None:intergenic | 25.0% |
| AAAATGTTCACTCTGATATC+TGG | - | chr3.3:61404902-61404921 | MS.gene008080:intron | 30.0% | |
| AAAGAACTGTAAATGTTCAC+GGG | + | chr3.3:61405684-61405703 | None:intergenic | 30.0% | |
| AACGATAGTAGACAAAATAG+AGG | - | chr3.3:61402253-61402272 | MS.gene008080:intron | 30.0% | |
| AAGCTTATCAAAATCAGATG+GGG | + | chr3.3:61406375-61406394 | None:intergenic | 30.0% | |
| AAGGAAAAAAGAAAGAAAGC+GGG | + | chr3.3:61405517-61405536 | None:intergenic | 30.0% | |
| AATCAAAAGGAAGTCATAGT+TGG | - | chr3.3:61404760-61404779 | MS.gene008080:intron | 30.0% | |
| ACAAGATTAGAGAGTAAGTT+GGG | - | chr3.3:61402147-61402166 | MS.gene008080:intron | 30.0% | |
| ACAAGCTTATCAAAATCAGA+TGG | + | chr3.3:61406377-61406396 | None:intergenic | 30.0% | |
| ACATTTACAGTTCTTTGTTG+GGG | - | chr3.3:61405688-61405707 | MS.gene008080:intron | 30.0% | |
| ACGATAGTAGACAAAATAGA+GGG | - | chr3.3:61402254-61402273 | MS.gene008080:intron | 30.0% | |
| AGTGATAACATTGACAACTA+TGG | + | chr3.3:61404812-61404831 | None:intergenic | 30.0% | |
| ATAAGATGAACAAACACTTG+AGG | + | chr3.3:61404203-61404222 | None:intergenic | 30.0% | |
| ATACAACAATGTCATTACTC+TGG | + | chr3.3:61403103-61403122 | None:intergenic | 30.0% | |
| ATATACAGTATGGTGAAACT+TGG | + | chr3.3:61405850-61405869 | None:intergenic | 30.0% | |
| ATCATTGTGAACTCTATGTT+TGG | - | chr3.3:61403074-61403093 | MS.gene008080:intron | 30.0% | |
| ATTCATTTGACTGTTGATAC+AGG | - | chr3.3:61405329-61405348 | MS.gene008080:intron | 30.0% | |
| CAAAGAACTGTAAATGTTCA+CGG | + | chr3.3:61405685-61405704 | None:intergenic | 30.0% | |
| CAAGCTTATCAAAATCAGAT+GGG | + | chr3.3:61406376-61406395 | None:intergenic | 30.0% | |
| GAACATTTACAGTTCTTTGT+TGG | - | chr3.3:61405686-61405705 | MS.gene008080:intron | 30.0% | |
| GAAGGAAAAAAGAAAGAAAG+CGG | + | chr3.3:61405518-61405537 | None:intergenic | 30.0% | |
| GCTTAAAAGAATCAGATAAG+AGG | - | chr3.3:61403218-61403237 | MS.gene008080:intron | 30.0% | |
| GTATCAACAGTCAAATGAAT+GGG | + | chr3.3:61405329-61405348 | None:intergenic | 30.0% | |
| GTGTAAAAGTTATACGCTTA+AGG | - | chr3.3:61404547-61404566 | MS.gene008080:intron | 30.0% | |
| GTGTCAAACAATTTATCTCT+TGG | - | chr3.3:61405386-61405405 | MS.gene008080:intron | 30.0% | |
| GTTTCTCTTATAGCTTATCT+AGG | + | chr3.3:61403429-61403448 | None:intergenic | 30.0% | |
| TACTACTCACTTTATTGTCT+AGG | - | chr3.3:61406249-61406268 | MS.gene008080:intron | 30.0% | |
| TATTTATGCAGGTATTCAAC+TGG | - | chr3.3:61405242-61405261 | MS.gene008080:intron | 30.0% | |
| TGTATCAACAGTCAAATGAA+TGG | + | chr3.3:61405330-61405349 | None:intergenic | 30.0% | |
| TTGTTTCAGTTTCATGAAAC+TGG | - | chr3.3:61402026-61402045 | MS.gene008080:intron | 30.0% | |
| ! | AAACTAGACTTAGGTTGTTT+GGG | - | chr3.3:61402198-61402217 | MS.gene008080:intron | 30.0% |
| ! | AATGTCAGTTGATATCCTAA+AGG | - | chr3.3:61406098-61406117 | MS.gene008080:intron | 30.0% |
| ! | ATTAATTTTTCATCGCAGGA+AGG | - | chr3.3:61406281-61406300 | MS.gene008080:intron | 30.0% |
| ! | CAACCATCTTTTCTTACTAT+AGG | + | chr3.3:61403322-61403341 | None:intergenic | 30.0% |
| ! | CTACCATCTTTTCTACTAAT+AGG | + | chr3.3:61402178-61402197 | None:intergenic | 30.0% |
| ! | TTAATTTTTCATCGCAGGAA+GGG | - | chr3.3:61406282-61406301 | MS.gene008080:intron | 30.0% |
| ! | TTTGACTTTGATTGATAAGG+TGG | - | chr3.3:61404504-61404523 | MS.gene008080:intron | 30.0% |
| !! | AAACTAGACTTAGGTTGTTT+TGG | - | chr3.3:61402198-61402217 | MS.gene008080:intron | 30.0% |
| !! | AATTTCCCAATTTTGTTGTC+TGG | + | chr3.3:61406317-61406336 | None:intergenic | 30.0% |
| !! | CAAATATGTTGATGATGTTG+TGG | - | chr3.3:61406206-61406225 | MS.gene008080:intron | 30.0% |
| !! | CTTCCTTTTGATTCACTTTT+TGG | + | chr3.3:61404753-61404772 | None:intergenic | 30.0% |
| !! | GATTATCACTGATTCAAAGA+AGG | + | chr3.3:61402988-61403007 | None:intergenic | 30.0% |
| !!! | AGGAAGTTTTTTTCTCTTTG+CGG | - | chr3.3:61404401-61404420 | MS.gene008080:intron | 30.0% |
| !!! | CTTTTGATTCACTTTTTGGT+GGG | + | chr3.3:61404749-61404768 | None:intergenic | 30.0% |
| !!! | TTTTAGCTTCAAAAGTGAGA+AGG | + | chr3.3:61403596-61403615 | None:intergenic | 30.0% |
| AAAAAATAGGAGCGAATGGA+TGG | - | chr3.3:61403130-61403149 | MS.gene008080:intron | 35.0% | |
| AAAAATGAAAGTGGGTCTCT+TGG | - | chr3.3:61404074-61404093 | MS.gene008080:intron | 35.0% | |
| AAAAGGAAGTCATAGTTGGA+TGG | - | chr3.3:61404764-61404783 | MS.gene008080:intron | 35.0% | |
| AAAATGAAAGTGGGTCTCTT+GGG | - | chr3.3:61404075-61404094 | MS.gene008080:intron | 35.0% | |
| AACAAACACTTGAGGAACTT+AGG | + | chr3.3:61404195-61404214 | None:intergenic | 35.0% | |
| AACAGTCAAATGAATGGGAT+TGG | + | chr3.3:61405324-61405343 | None:intergenic | 35.0% | |
| AAGAATCAGATAAGAGGGAA+TGG | - | chr3.3:61403224-61403243 | MS.gene008080:intron | 35.0% | |
| ACAACATTAGAAGAGAGTTG+GGG | - | chr3.3:61403291-61403310 | MS.gene008080:intron | 35.0% | |
| ACAATTTATCTCTTGGAGAC+AGG | - | chr3.3:61405393-61405412 | MS.gene008080:intron | 35.0% | |
| ACAGTCAAATGAATGGGATT+GGG | + | chr3.3:61405323-61405342 | None:intergenic | 35.0% | |
| ACAGTTTCAAGAAATTCCAC+TGG | - | chr3.3:61405427-61405446 | MS.gene008080:intron | 35.0% | |
| AGATGGTAGAAACTAGACTT+AGG | - | chr3.3:61402189-61402208 | MS.gene008080:intron | 35.0% | |
| AGATGGTTGAAACTAGACTT+AGG | - | chr3.3:61403333-61403352 | MS.gene008080:intron | 35.0% | |
| AGCTTATCAAAATCAGATGG+GGG | + | chr3.3:61406374-61406393 | None:intergenic | 35.0% | |
| ATAGAGGGAGAAGAATAAGA+AGG | + | chr3.3:61405536-61405555 | None:intergenic | 35.0% | |
| ATTGCTCGAACTAATCAGAT+AGG | - | chr3.3:61402070-61402089 | MS.gene008080:CDS | 35.0% | |
| CAAATACACCACTAAAGAAG+AGG | + | chr3.3:61405180-61405199 | None:intergenic | 35.0% | |
| CCACCAAAAAGTGAATCAAA+AGG | - | chr3.3:61404747-61404766 | MS.gene008080:intron | 35.0% | |
| CGATAGTAGACAAAATAGAG+GGG | - | chr3.3:61402255-61402274 | MS.gene008080:intron | 35.0% | |
| CTAATTCCCACATTAAGTGT+GGG | + | chr3.3:61402626-61402645 | None:intergenic | 35.0% | |
| CTCTTCTTTAGTGGTGTATT+TGG | - | chr3.3:61405178-61405197 | MS.gene008080:intron | 35.0% | |
| CTTCTCGAGAATAAAACTCA+TGG | + | chr3.3:61405298-61405317 | None:intergenic | 35.0% | |
| CTTGGCAGAAAAATTGAACA+CGG | - | chr3.3:61406637-61406656 | MS.gene008080:CDS | 35.0% | |
| GACAACATTAGAAGAGAGTT+GGG | - | chr3.3:61403290-61403309 | MS.gene008080:intron | 35.0% | |
| GACAAGATTAGAGAGTAAGT+TGG | - | chr3.3:61402146-61402165 | MS.gene008080:intron | 35.0% | |
| GAGAAAATCAATCCAGTAGT+AGG | - | chr3.3:61405732-61405751 | MS.gene008080:intron | 35.0% | |
| GAGGAACAGCATATGAATTA+CGG | + | chr3.3:61401778-61401797 | None:intergenic | 35.0% | |
| GATTGACACAACATTACCAA+TGG | + | chr3.3:61405918-61405937 | None:intergenic | 35.0% | |
| GCACCTATAGTAAGAAAAGA+TGG | - | chr3.3:61403316-61403335 | MS.gene008080:intron | 35.0% | |
| GCACCTATTAGTAGAAAAGA+TGG | - | chr3.3:61402172-61402191 | MS.gene008080:intron | 35.0% | |
| GGGACAACAACATATTATGA+TGG | + | chr3.3:61404729-61404748 | None:intergenic | 35.0% | |
| TAATGAATTGGTGAAAGACG+TGG | - | chr3.3:61403470-61403489 | MS.gene008080:intron | 35.0% | |
| TAGATCTGGGAAATTATAGG+AGG | + | chr3.3:61404134-61404153 | None:intergenic | 35.0% | |
| TCACAATGAATCCATTGATC+AGG | - | chr3.3:61401796-61401815 | MS.gene008080:intron | 35.0% | |
| TCAGAAGTTCATGCTCTTAA+TGG | + | chr3.3:61402537-61402556 | None:intergenic | 35.0% | |
| TCTGATTCATCTCATACAAG+AGG | + | chr3.3:61404280-61404299 | None:intergenic | 35.0% | |
| TGACAACATTAGAAGAGAGT+TGG | - | chr3.3:61403289-61403308 | MS.gene008080:intron | 35.0% | |
| TTGCACCAGACAACAAAATT+GGG | - | chr3.3:61406309-61406328 | MS.gene008080:intron | 35.0% | |
| TTGCTTTCGAAGCTAAAACA+TGG | - | chr3.3:61403636-61403655 | MS.gene008080:intron | 35.0% | |
| TTTGTTTGGAAGCCAAAGTA+AGG | - | chr3.3:61401944-61401963 | MS.gene008080:CDS | 35.0% | |
| ! | AAGAGACCCACTTTCATTTT+TGG | + | chr3.3:61404075-61404094 | None:intergenic | 35.0% |
| ! | AATGTTCACGGGTTGTATAA+AGG | + | chr3.3:61405673-61405692 | None:intergenic | 35.0% |
| ! | AATTGTTCTGACCTTTTTCC+AGG | - | chr3.3:61404684-61404703 | MS.gene008080:intron | 35.0% |
| ! | CAATTAGAGGCTTTGTCATT+TGG | + | chr3.3:61405825-61405844 | None:intergenic | 35.0% |
| ! | CATTTTGAACCTACGTCATA+TGG | + | chr3.3:61404888-61404907 | None:intergenic | 35.0% |
| ! | GAAACTAGACTTAGGTTGTT+TGG | - | chr3.3:61402197-61402216 | MS.gene008080:intron | 35.0% |
| ! | GTTACTGTGTTTTACGAAGT+GGG | - | chr3.3:61406430-61406449 | MS.gene008080:intron | 35.0% |
| ! | GTTTCTTTAGAGATCATCAC+TGG | - | chr3.3:61405022-61405041 | MS.gene008080:intron | 35.0% |
| ! | GTTTGACACATAAGCTTTGA+TGG | + | chr3.3:61405375-61405394 | None:intergenic | 35.0% |
| ! | TGATCAATGGATTCATTGTG+AGG | + | chr3.3:61401797-61401816 | None:intergenic | 35.0% |
| ! | TGGTTTTTGACATAACACCA+TGG | - | chr3.3:61402328-61402347 | MS.gene008080:intron | 35.0% |
| ! | TGTTACTGTGTTTTACGAAG+TGG | - | chr3.3:61406429-61406448 | MS.gene008080:intron | 35.0% |
| !! | AGAGACCCACTTTCATTTTT+GGG | + | chr3.3:61404074-61404093 | None:intergenic | 35.0% |
| !! | CTTTGAAATCCATATGACGT+AGG | - | chr3.3:61404876-61404895 | MS.gene008080:intron | 35.0% |
| !! | TCACCTAACATAGCTTTGTT+TGG | - | chr3.3:61406539-61406558 | MS.gene008080:CDS | 35.0% |
| !!! | CCTTTTGATTCACTTTTTGG+TGG | + | chr3.3:61404750-61404769 | None:intergenic | 35.0% |
| !!! | TTTTAGCTTCGAAAGCAAGA+AGG | + | chr3.3:61403634-61403653 | None:intergenic | 35.0% |
| !!! | TTTTTTATGGGAAGACCCAT+TGG | - | chr3.3:61404984-61405003 | MS.gene008080:intron | 35.0% |
| AAAATCAGATGGGGGCAATT+TGG | + | chr3.3:61406366-61406385 | None:intergenic | 40.0% | |
| AAAATCCCCTCTGACTTAGA+AGG | - | chr3.3:61406135-61406154 | MS.gene008080:intron | 40.0% | |
| AAATCAGATGGGGGCAATTT+GGG | + | chr3.3:61406365-61406384 | None:intergenic | 40.0% | |
| AATTCCACTGGATCTTCGTA+TGG | - | chr3.3:61405439-61405458 | MS.gene008080:intron | 40.0% | |
| ACACATGCTTCATCTGTTTC+AGG | - | chr3.3:61406565-61406584 | MS.gene008080:CDS | 40.0% | |
| ACACTTACACTACCTACTAC+TGG | + | chr3.3:61405747-61405766 | None:intergenic | 40.0% | |
| ACATGAATCAAATGACGCCA+TGG | + | chr3.3:61402348-61402367 | None:intergenic | 40.0% | |
| ACTAATCAGATAGGAGGGAT+TGG | - | chr3.3:61402079-61402098 | MS.gene008080:CDS | 40.0% | |
| AGGAATTTAGGAACAGAACC+CGG | + | chr3.3:61402813-61402832 | None:intergenic | 40.0% | |
| AGTAGAATCGTACCTTGATG+AGG | + | chr3.3:61404105-61404124 | None:intergenic | 40.0% | |
| ATACAGGATTCACAACTGGA+GGG | - | chr3.3:61405345-61405364 | MS.gene008080:intron | 40.0% | |
| CACAAGAACTCAACTTAGCT+TGG | - | chr3.3:61406619-61406638 | MS.gene008080:CDS | 40.0% | |
| CAGCCAAACAAAGCTATGTT+AGG | + | chr3.3:61406545-61406564 | None:intergenic | 40.0% | |
| CGCTAGATCTGGGAAATTAT+AGG | + | chr3.3:61404137-61404156 | None:intergenic | 40.0% | |
| CTAAGTTGCCTCTTCTTTAG+TGG | - | chr3.3:61405169-61405188 | MS.gene008080:intron | 40.0% | |
| CTCGAACTAATCAGATAGGA+GGG | - | chr3.3:61402074-61402093 | MS.gene008080:CDS | 40.0% | |
| GAAGAAATAGACACGACTAC+AGG | + | chr3.3:61404582-61404601 | None:intergenic | 40.0% | |
| GCGTCATTTGATTCATGTAG+CGG | - | chr3.3:61402350-61402369 | MS.gene008080:intron | 40.0% | |
| GCTAATTCCCACATTAAGTG+TGG | + | chr3.3:61402627-61402646 | None:intergenic | 40.0% | |
| GTAGAATCGTACCTTGATGA+GGG | + | chr3.3:61404104-61404123 | None:intergenic | 40.0% | |
| GTGAAACTTGGCTCAATTAG+AGG | + | chr3.3:61405838-61405857 | None:intergenic | 40.0% | |
| GTTGATACAGGATTCACAAC+TGG | - | chr3.3:61405341-61405360 | MS.gene008080:intron | 40.0% | |
| GTTGCACCAGACAACAAAAT+TGG | - | chr3.3:61406308-61406327 | MS.gene008080:intron | 40.0% | |
| TAAAATGTAGATGGAGGCGA+GGG | + | chr3.3:61401827-61401846 | None:intergenic | 40.0% | |
| TCACTTCTGAACCAAGCAAT+TGG | - | chr3.3:61405952-61405971 | MS.gene008080:intron | 40.0% | |
| TCAGATGTTCACGCTCTTAA+TGG | + | chr3.3:61403684-61403703 | None:intergenic | 40.0% | |
| TCTGATTCCTCTCATACAAG+AGG | + | chr3.3:61402910-61402929 | None:intergenic | 40.0% | |
| TGAAAAGACCTCCAATTGCT+TGG | + | chr3.3:61405966-61405985 | None:intergenic | 40.0% | |
| TGTAACGAGAGTAGATCAGA+AGG | - | chr3.3:61403394-61403413 | MS.gene008080:intron | 40.0% | |
| TTAAAATGTAGATGGAGGCG+AGG | + | chr3.3:61401828-61401847 | None:intergenic | 40.0% | |
| TTCATTCCAGTTTCATGAGC+TGG | + | chr3.3:61403180-61403199 | None:intergenic | 40.0% | |
| TTTCAGCTTCAAAAGCGAGA+AGG | + | chr3.3:61402488-61402507 | None:intergenic | 40.0% | |
| ! | GTGTATTTGGTGATCTTGAG+AGG | - | chr3.3:61405191-61405210 | MS.gene008080:intron | 40.0% |
| ! | GTTTCTTTAGGGATCATCAC+TGG | - | chr3.3:61405106-61405125 | MS.gene008080:intron | 40.0% |
| ! | TGATATCTGGAAGTGTGGAA+TGG | - | chr3.3:61404915-61404934 | MS.gene008080:intron | 40.0% |
| ! | TTTTTGTCTAGATAAGGGCG+AGG | - | chr3.3:61402857-61402876 | MS.gene008080:CDS | 40.0% |
| !! | AAGCCTTATTCCACTAAGTG+GGG | + | chr3.3:61403539-61403558 | None:intergenic | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | + | chr3.3:61403540-61403559 | None:intergenic | 40.0% |
| !! | GAATGAGTTGGTGAAAGACA+TGG | - | chr3.3:61402308-61402327 | MS.gene008080:intron | 40.0% |
| !!! | CTTTTGAAGCTGAAACATGG+AGG | - | chr3.3:61402493-61402512 | MS.gene008080:intron | 40.0% |
| !!! | TCGCTTTTGAAGCTGAAACA+TGG | - | chr3.3:61402490-61402509 | MS.gene008080:intron | 40.0% |
| ACGGGACCCAAAAATGAAAG+TGG | - | chr3.3:61404065-61404084 | MS.gene008080:intron | 45.0% | |
| AGGAACTTAGGAACAGAACC+CGG | + | chr3.3:61404183-61404202 | None:intergenic | 45.0% | |
| ATGGTTGAAGCTGAGCGAAT+TGG | - | chr3.3:61405458-61405477 | MS.gene008080:intron | 45.0% | |
| CACTCTGATATCTGGAAGTG+TGG | - | chr3.3:61404910-61404929 | MS.gene008080:intron | 45.0% | |
| CAGATGTTGAATACGACGAG+AGG | + | chr3.3:61401668-61401687 | None:intergenic | 45.0% | |
| CCACTTAGTGGAATAAGGCT+TGG | - | chr3.3:61403538-61403557 | MS.gene008080:CDS | 45.0% | |
| CGCTGCATCTGGGAAATTAT+AGG | + | chr3.3:61402767-61402786 | None:intergenic | 45.0% | |
| CGGATATCAACAGTTCCATC+AGG | + | chr3.3:61401758-61401777 | None:intergenic | 45.0% | |
| CGGGACCCAAAAATGAAAGT+GGG | - | chr3.3:61404066-61404085 | MS.gene008080:intron | 45.0% | |
| CTTCTGAACCAAGCAATTGG+AGG | - | chr3.3:61405955-61405974 | MS.gene008080:intron | 45.0% | |
| CTTGGATCTGTTCTTCCTGA+TGG | - | chr3.3:61401740-61401759 | MS.gene008080:intron | 45.0% | |
| GAATTGCAACACTGTGCGAT+TGG | + | chr3.3:61401600-61401619 | None:intergenic | 45.0% | |
| GATACAGGATTCACAACTGG+AGG | - | chr3.3:61405344-61405363 | MS.gene008080:intron | 45.0% | |
| GCTCGAACTAATCAGATAGG+AGG | - | chr3.3:61402073-61402092 | MS.gene008080:CDS | 45.0% | |
| GTTTCAGGATCACTTGCTCA+TGG | - | chr3.3:61406580-61406599 | MS.gene008080:CDS | 45.0% | |
| TACAGGATTCACAACTGGAG+GGG | - | chr3.3:61405346-61405365 | MS.gene008080:intron | 45.0% | |
| TAGCTGCCCACACTTAATGT+GGG | - | chr3.3:61402617-61402636 | MS.gene008080:intron | 45.0% | |
| TCAACCATACGAAGATCCAG+TGG | + | chr3.3:61405446-61405465 | None:intergenic | 45.0% | |
| TCAACTGGACTTGGAGTAAC+TGG | - | chr3.3:61405257-61405276 | MS.gene008080:intron | 45.0% | |
| TCCATGCCTTCTAAGTCAGA+GGG | + | chr3.3:61406144-61406163 | None:intergenic | 45.0% | |
| TCTGACACCTCTTGTATGAG+AGG | - | chr3.3:61402900-61402919 | MS.gene008080:CDS | 45.0% | |
| TGCAGGTATTCAACTGGACT+TGG | - | chr3.3:61405248-61405267 | MS.gene008080:intron | 45.0% | |
| TGTCAACAGTGGTTGCCTTT+AGG | + | chr3.3:61406116-61406135 | None:intergenic | 45.0% | |
| TTAGCTGCCCACACTTAATG+TGG | - | chr3.3:61402616-61402635 | MS.gene008080:intron | 45.0% | |
| TTCACTCCAGCTCATGAAAC+TGG | - | chr3.3:61403171-61403190 | MS.gene008080:intron | 45.0% | |
| TTCCATGCCTTCTAAGTCAG+AGG | + | chr3.3:61406145-61406164 | None:intergenic | 45.0% | |
| TTCTCAGAGCTTATCCGCTA+AGG | - | chr3.3:61401637-61401656 | MS.gene008080:CDS | 45.0% | |
| ! | AGAGGGGATTTTGTCAACAG+TGG | + | chr3.3:61406127-61406146 | None:intergenic | 45.0% |
| ! | TCTGGAAGTGTGGAATGGAA+TGG | - | chr3.3:61404920-61404939 | MS.gene008080:intron | 45.0% |
| ! | TGGGAATTAGCTTCCGTACT+TGG | - | chr3.3:61402636-61402655 | MS.gene008080:intron | 45.0% |
| ! | TGTTCTGACCTTTTTCCAGG+TGG | - | chr3.3:61404687-61404706 | MS.gene008080:intron | 45.0% |
| !! | AAGCCTTATTCCACCAAGTG+GGG | + | chr3.3:61402377-61402396 | None:intergenic | 45.0% |
| !! | AGAAGGCATGGAAGCATCAA+TGG | - | chr3.3:61406152-61406171 | MS.gene008080:intron | 45.0% |
| !! | CAAGCCTTATTCCACCAAGT+GGG | + | chr3.3:61402378-61402397 | None:intergenic | 45.0% |
| !! | CCAAGCCTTATTCCACTAAG+TGG | + | chr3.3:61403541-61403560 | None:intergenic | 45.0% |
| !! | TTCATTAAAAAAATTATTAT+AGG | + | chr3.3:61404340-61404359 | None:intergenic | 5.0% |
| AAAGTGGCTGTCGCTAGATC+TGG | + | chr3.3:61404148-61404167 | None:intergenic | 50.0% | |
| AAAGTGGTTGTCGCTGCATC+TGG | + | chr3.3:61402778-61402797 | None:intergenic | 50.0% | |
| AAGTGGCTGTCGCTAGATCT+GGG | + | chr3.3:61404147-61404166 | None:intergenic | 50.0% | |
| AAGTGGTTGTCGCTGCATCT+GGG | + | chr3.3:61402777-61402796 | None:intergenic | 50.0% | |
| AATAGGCAACCACGAGCTTC+AGG | + | chr3.3:61405614-61405633 | None:intergenic | 50.0% | |
| ACAGGATTCACAACTGGAGG+GGG | - | chr3.3:61405347-61405366 | MS.gene008080:intron | 50.0% | |
| ACTGGACTTGGAGTAACTGG+TGG | - | chr3.3:61405260-61405279 | MS.gene008080:intron | 50.0% | |
| ATGACGCGTTCAGCTTGATC+AGG | + | chr3.3:61401710-61401729 | None:intergenic | 50.0% | |
| ATGCAGCGACAACCACTTTC+TGG | - | chr3.3:61402779-61402798 | MS.gene008080:intron | 50.0% | |
| CCATGCCTTCTAAGTCAGAG+GGG | + | chr3.3:61406143-61406162 | None:intergenic | 50.0% | |
| CGAGAGTAGATCAGAAGGAG+AGG | - | chr3.3:61403399-61403418 | MS.gene008080:intron | 50.0% | |
| CTCTTGGGAAACCCTCATCA+AGG | - | chr3.3:61404090-61404109 | MS.gene008080:intron | 50.0% | |
| GACGAGAGGATGAACCTTAG+CGG | + | chr3.3:61401654-61401673 | None:intergenic | 50.0% | |
| GAGCTTCAGGACACAAGCTT+CGG | + | chr3.3:61405601-61405620 | None:intergenic | 50.0% | |
| GATCAAGCTGAACGCGTCAT+TGG | - | chr3.3:61401710-61401729 | MS.gene008080:intron | 50.0% | |
| GCATGTAGAGAGAAGACGTC+TGG | - | chr3.3:61402220-61402239 | MS.gene008080:intron | 50.0% | |
| GCTTGTGAACGACAGCTTAC+AGG | - | chr3.3:61406391-61406410 | MS.gene008080:intron | 50.0% | |
| GGACCCCACTTAGTGGAATA+AGG | - | chr3.3:61403533-61403552 | MS.gene008080:CDS | 50.0% | |
| ! | ATCTAGCGACAGCCACTTTC+TGG | - | chr3.3:61404149-61404168 | MS.gene008080:intron | 50.0% |
| ! | CCACTTGGTGGAATAAGGCT+TGG | - | chr3.3:61402376-61402395 | MS.gene008080:intron | 50.0% |
| !! | AGCGGATAAGCTCTGAGAAG+AGG | + | chr3.3:61401636-61401655 | None:intergenic | 50.0% |
| !! | CACTTTCTGGCTTGATCACC+GGG | - | chr3.3:61402792-61402811 | MS.gene008080:CDS | 50.0% |
| !! | CCAAGCCTTATTCCACCAAG+TGG | + | chr3.3:61402379-61402398 | None:intergenic | 50.0% |
| !! | CCACTTTCTGGCTTGATCAC+CGG | - | chr3.3:61402791-61402810 | MS.gene008080:CDS | 50.0% |
| ACTCTATGTCCAACGCCACC+TGG | + | chr3.3:61404705-61404724 | None:intergenic | 55.0% | |
| AGCTTGTGTCCTGAAGCTCG+TGG | - | chr3.3:61405602-61405621 | MS.gene008080:intron | 55.0% | |
| ATGTAGATGGAGGCGAGGGA+AGG | + | chr3.3:61401823-61401842 | None:intergenic | 55.0% | |
| CCCCTCTGACTTAGAAGGCA+TGG | - | chr3.3:61406140-61406159 | MS.gene008080:intron | 55.0% | |
| CCGGTGATCAAGCCAGAAAG+TGG | + | chr3.3:61402794-61402813 | None:intergenic | 55.0% | |
| CGAGGGAAGGACCTGATCAA+TGG | + | chr3.3:61401810-61401829 | None:intergenic | 55.0% | |
| CGCGTCATTGGAACGCTTCT+TGG | - | chr3.3:61401722-61401741 | MS.gene008080:intron | 55.0% | |
| GTCCAACGCCACCTGGAAAA+AGG | + | chr3.3:61404698-61404717 | None:intergenic | 55.0% | |
| ! | GACCTTTTTCCAGGTGGCGT+TGG | - | chr3.3:61404693-61404712 | MS.gene008080:intron | 55.0% |
| ! | GGACCCCACTTGGTGGAATA+AGG | - | chr3.3:61402371-61402390 | MS.gene008080:intron | 55.0% |
| !! | ATGTAGCGGACCCCACTTAG+TGG | - | chr3.3:61403526-61403545 | MS.gene008080:CDS | 55.0% |
| !! | TTCATGTAGCGGACCCCACT+TGG | - | chr3.3:61402361-61402380 | MS.gene008080:intron | 55.0% |
| !! | ATGTAGCGGACCCCACTTGG+TGG | - | chr3.3:61402364-61402383 | MS.gene008080:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 61401587 | 61406676 | 61401587 | ID=MS.gene008080 |
| chr3.3 | mRNA | 61401587 | 61406676 | 61401587 | ID=MS.gene008080.t1;Parent=MS.gene008080 |
| chr3.3 | exon | 61406446 | 61406676 | 61406446 | ID=MS.gene008080.t1.exon1;Parent=MS.gene008080.t1 |
| chr3.3 | CDS | 61406446 | 61406676 | 61406446 | ID=cds.MS.gene008080.t1;Parent=MS.gene008080.t1 |
| chr3.3 | exon | 61403478 | 61403557 | 61403478 | ID=MS.gene008080.t1.exon2;Parent=MS.gene008080.t1 |
| chr3.3 | CDS | 61403478 | 61403557 | 61403478 | ID=cds.MS.gene008080.t1;Parent=MS.gene008080.t1 |
| chr3.3 | exon | 61402781 | 61403010 | 61402781 | ID=MS.gene008080.t1.exon3;Parent=MS.gene008080.t1 |
| chr3.3 | CDS | 61402781 | 61403010 | 61402781 | ID=cds.MS.gene008080.t1;Parent=MS.gene008080.t1 |
| chr3.3 | exon | 61402036 | 61402157 | 61402036 | ID=MS.gene008080.t1.exon4;Parent=MS.gene008080.t1 |
| chr3.3 | CDS | 61402036 | 61402157 | 61402036 | ID=cds.MS.gene008080.t1;Parent=MS.gene008080.t1 |
| chr3.3 | exon | 61401851 | 61401964 | 61401851 | ID=MS.gene008080.t1.exon5;Parent=MS.gene008080.t1 |
| chr3.3 | CDS | 61401851 | 61401964 | 61401851 | ID=cds.MS.gene008080.t1;Parent=MS.gene008080.t1 |
| chr3.3 | exon | 61401587 | 61401676 | 61401587 | ID=MS.gene008080.t1.exon6;Parent=MS.gene008080.t1 |
| chr3.3 | CDS | 61401587 | 61401676 | 61401587 | ID=cds.MS.gene008080.t1;Parent=MS.gene008080.t1 |
| Gene Sequence |
| Protein sequence |
