Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29607.t1 | XP_003616580.1 | 100 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 1.50E-168 | 602.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29607.t1 | O24412 | 89.9 | 308 | 31 | 0 | 1 | 308 | 1 | 308 | 1.8e-154 | 546.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29607.t1 | B7FLW2 | 100.0 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 1.1e-168 | 602.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene29607 | 0.811032 | 8.57E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene29607 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene052717 | MS.gene29607 | 0.815892 | 7.32E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene29607 | 0.805778 | 1.13E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene29607 | 0.84824 | 6.95E-60 | -1.69E-46 |
| MS.gene059625 | MS.gene29607 | 0.8109 | 9.16E-51 | -1.69E-46 |
| MS.gene059774 | MS.gene29607 | 0.802254 | 6.12E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene29607 | -0.814874 | 1.23E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene29607 | 0.810727 | 9.98E-51 | -1.69E-46 |
| MS.gene060697 | MS.gene29607 | 0.801337 | 9.44E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29607.t1 | MTR_5g081980 | 100.000 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 0.0 | 629 |
| MS.gene29607.t1 | MTR_3g070180 | 94.822 | 309 | 16 | 0 | 1 | 309 | 1 | 309 | 0.0 | 598 |
| MS.gene29607.t1 | MTR_3g070190 | 32.841 | 271 | 165 | 6 | 19 | 285 | 25 | 282 | 6.31e-35 | 128 |
| MS.gene29607.t1 | MTR_5g082000 | 31.365 | 271 | 169 | 6 | 19 | 285 | 21 | 278 | 2.82e-31 | 119 |
| MS.gene29607.t1 | MTR_3g009270 | 26.014 | 296 | 181 | 6 | 19 | 285 | 13 | 299 | 2.58e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29607.t1 | AT5G05780 | 89.935 | 308 | 31 | 0 | 1 | 308 | 1 | 308 | 0.0 | 571 |
| MS.gene29607.t1 | AT3G11270 | 89.508 | 305 | 32 | 0 | 1 | 305 | 1 | 305 | 0.0 | 563 |
| MS.gene29607.t1 | AT5G05780 | 88.961 | 308 | 31 | 1 | 1 | 308 | 1 | 305 | 0.0 | 560 |
| MS.gene29607.t1 | AT3G11270 | 88.525 | 305 | 32 | 1 | 1 | 305 | 1 | 302 | 0.0 | 551 |
| MS.gene29607.t1 | AT2G39990 | 29.487 | 234 | 148 | 6 | 19 | 248 | 30 | 250 | 3.87e-25 | 102 |
| MS.gene29607.t1 | AT4G26430 | 25.081 | 307 | 191 | 7 | 19 | 295 | 13 | 310 | 7.49e-23 | 96.7 |
| MS.gene29607.t1 | AT5G56280 | 24.262 | 305 | 192 | 7 | 19 | 295 | 13 | 306 | 6.81e-22 | 94.4 |
Find 63 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACAGGATCTCATGGTTTA+AGG | 0.226556 | 5.2:+70031077 | None:intergenic |
| CGCGTCGTTGGAGTTCTTCT+TGG | 0.238114 | 5.2:-70034962 | MS.gene29607:CDS |
| ATTATAACCAAAACGGGATT+TGG | 0.243791 | 5.2:+70033823 | None:intergenic |
| GTAGGAATTCCCAACTCTTT+AGG | 0.247111 | 5.2:+70033790 | None:intergenic |
| TACCTTGACCTTGTCATTGA+TGG | 0.274529 | 5.2:-70031108 | MS.gene29607:CDS |
| GACGCGTTTGCGAGTGTCTT+TGG | 0.305618 | 5.2:+70034979 | None:intergenic |
| CTCTGTTGCAAGGGTGCTAA+TGG | 0.335329 | 5.2:+70031337 | None:intergenic |
| GCTCATGAAGTTGAGGAAAT+AGG | 0.335482 | 5.2:-70033506 | MS.gene29607:intron |
| TGAGATCCTGTATCATTTGC+AGG | 0.345264 | 5.2:-70031067 | MS.gene29607:intron |
| CTATGTTCCAAATCCCGTTT+TGG | 0.360839 | 5.2:-70033830 | MS.gene29607:CDS |
| CAAATCAGTGACATTAAGAT+TGG | 0.377033 | 5.2:+70030397 | None:intergenic |
| ACATCAATTATAACCAAAAC+GGG | 0.396892 | 5.2:+70033817 | None:intergenic |
| ACTCACAGCCTTGAAGGGTT+TGG | 0.398386 | 5.2:-70031157 | MS.gene29607:CDS |
| TCTTGCATCCAAACCCTTCA+AGG | 0.405808 | 5.2:+70031149 | None:intergenic |
| CATGAGCAGCAATTTCTGAT+TGG | 0.415675 | 5.2:+70033522 | None:intergenic |
| ATGACAAGGATCCTAGCATT+TGG | 0.417257 | 5.2:-70034730 | MS.gene29607:CDS |
| AACATCAATTATAACCAAAA+CGG | 0.431934 | 5.2:+70033816 | None:intergenic |
| TAATGTCACTGATTTGATCA+AGG | 0.437836 | 5.2:-70030390 | MS.gene29607:CDS |
| TGACATTAAGATTGGGCAGC+AGG | 0.443727 | 5.2:+70030405 | None:intergenic |
| GATGTTGAACCTAAAGAGTT+GGG | 0.449227 | 5.2:-70033799 | MS.gene29607:CDS |
| CTTCTTGGTTCCTCGTTCAA+AGG | 0.450109 | 5.2:-70034947 | MS.gene29607:CDS |
| TACAGGATCTCATGGTTTAA+GGG | 0.462303 | 5.2:+70031078 | None:intergenic |
| TGCAAAACTCACAGCCTTGA+AGG | 0.463569 | 5.2:-70031163 | MS.gene29607:CDS |
| TGTAGCTAAGGAGCATGTTG+TGG | 0.468792 | 5.2:-70034548 | MS.gene29607:intron |
| TCCTTGTCATCTTCTTCAAA+CGG | 0.478344 | 5.2:+70034743 | None:intergenic |
| TCTCAACTTCCTGCTGTACT+TGG | 0.483401 | 5.2:+70029804 | None:intergenic |
| TGATGTTGAACCTAAAGAGT+TGG | 0.483855 | 5.2:-70033800 | MS.gene29607:CDS |
| GTAGCTAAGGAGCATGTTGT+GGG | 0.499396 | 5.2:-70034547 | MS.gene29607:intron |
| TCTATGTTCAAGAGAATCAA+TGG | 0.505078 | 5.2:-70034674 | MS.gene29607:intron |
| TGCTCAACAAAGAACATGAA+AGG | 0.510479 | 5.2:-70029854 | MS.gene29607:CDS |
| GTTGTGGGGTGGTATAGTAC+TGG | 0.515160 | 5.2:-70034532 | MS.gene29607:CDS |
| CTTCCTGCTGTACTTGGTAC+AGG | 0.516124 | 5.2:+70029810 | None:intergenic |
| AACCAACCTGCAAATGATAC+AGG | 0.522061 | 5.2:+70031061 | None:intergenic |
| TGCTGTTGAGGAGGTTAAAG+AGG | 0.523785 | 5.2:-70033755 | MS.gene29607:intron |
| GACACTCGCAAACGCGTCGT+TGG | 0.526211 | 5.2:-70034974 | MS.gene29607:CDS |
| GAAAACTAATGATCAAATGC+TGG | 0.532471 | 5.2:-70030264 | MS.gene29607:CDS |
| CCTTGTTGTTAATCAAGTTG+TGG | 0.533219 | 5.2:+70030201 | None:intergenic |
| GCTCAACAAAGAACATGAAA+GGG | 0.533816 | 5.2:-70029853 | MS.gene29607:CDS |
| AAATCAGTGACATTAAGATT+GGG | 0.537245 | 5.2:+70030398 | None:intergenic |
| CAAAAGGCACCTCTGTTGCA+AGG | 0.539561 | 5.2:+70031327 | None:intergenic |
| TGATCAAGAAACCAAATGCT+AGG | 0.549445 | 5.2:+70034719 | None:intergenic |
| ACATTTGCTTAGAGATGTGA+AGG | 0.560287 | 5.2:-70031366 | MS.gene29607:CDS |
| GCAAAACTCACAGCCTTGAA+GGG | 0.565234 | 5.2:-70031162 | MS.gene29607:CDS |
| AATTGCTGCTCATGAAGTTG+AGG | 0.565331 | 5.2:-70033513 | MS.gene29607:CDS |
| ACTATGCTGAGTAAAACTAA+AGG | 0.568083 | 5.2:+70035022 | None:intergenic |
| GCAAATGATACAGGATCTCA+TGG | 0.569112 | 5.2:+70031070 | None:intergenic |
| TGCCACTCAGAAGAGTCAAA+AGG | 0.570358 | 5.2:-70033558 | MS.gene29607:CDS |
| AAAAGCTTACTATGCTGTTG+AGG | 0.571528 | 5.2:-70033767 | MS.gene29607:CDS |
| GTGCCTGTACCAAGTACAGC+AGG | 0.578421 | 5.2:-70029813 | MS.gene29607:CDS |
| AGCTTACTATGCTGTTGAGG+AGG | 0.588880 | 5.2:-70033764 | MS.gene29607:CDS |
| CATTAGCACCCTTGCAACAG+AGG | 0.592118 | 5.2:-70031336 | MS.gene29607:intron |
| CCACAACTTGATTAACAACA+AGG | 0.604169 | 5.2:-70030201 | MS.gene29607:intron |
| TTCCATCAATGACAAGGTCA+AGG | 0.607781 | 5.2:+70031106 | None:intergenic |
| GATATCACCAACAGCTACGC+CGG | 0.611908 | 5.2:-70034917 | MS.gene29607:intron |
| AAAAGGCACCTCTGTTGCAA+GGG | 0.618690 | 5.2:+70031328 | None:intergenic |
| ATCGACGGTGCCTTTGAACG+AGG | 0.625234 | 5.2:+70034937 | None:intergenic |
| GCCGTTTGAAGAAGATGACA+AGG | 0.651393 | 5.2:-70034744 | MS.gene29607:CDS |
| AATTGTACCGGCGTAGCTGT+TGG | 0.654663 | 5.2:+70034910 | None:intergenic |
| GTAGCTGTTGGTGATATCGA+CGG | 0.656872 | 5.2:+70034922 | None:intergenic |
| CTAAGGAGCATGTTGTGGGG+TGG | 0.656967 | 5.2:-70034543 | MS.gene29607:CDS |
| CACTTCTAATGAGAGACGAT+AGG | 0.662773 | 5.2:+70030234 | None:intergenic |
| GAAGCTTTCCATCAATGACA+AGG | 0.673682 | 5.2:+70031100 | None:intergenic |
| TAGCTAAGGAGCATGTTGTG+GGG | 0.682914 | 5.2:-70034546 | MS.gene29607:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCATTTATGATTTTT+GGG | - | chr5.2:70033392-70033411 | MS.gene29607:intron | 10.0% |
| !!! | TAATTAAGTGTTATTAATAA+CGG | + | chr5.2:70033438-70033457 | None:intergenic | 10.0% |
| !!! | TACTTTTCTTTTTTAAATTA+TGG | - | chr5.2:70034074-70034093 | MS.gene29607:intron | 10.0% |
| !!! | TATTTTTCATTTATGATTTT+TGG | - | chr5.2:70033391-70033410 | MS.gene29607:intron | 10.0% |
| !! | AAATTGAACTCATTAAATTA+TGG | + | chr5.2:70032996-70033015 | None:intergenic | 15.0% |
| !! | AATTAAGTTCGTTAAATAAA+TGG | - | chr5.2:70032499-70032518 | MS.gene29607:intron | 15.0% |
| !! | ATTAAGTTCGTTAAATAAAT+GGG | - | chr5.2:70032500-70032519 | MS.gene29607:intron | 15.0% |
| !!! | AAAGAAGAGTATAAATTTAT+AGG | + | chr5.2:70033484-70033503 | None:intergenic | 15.0% |
| !!! | TGATTTGGTTTTATATTTAT+GGG | - | chr5.2:70034760-70034779 | MS.gene29607:intron | 15.0% |
| !! | AAATTTGATGTGATTAAAGA+TGG | - | chr5.2:70030288-70030307 | MS.gene29607:intron | 20.0% |
| !! | AACATCAATTATAACCAAAA+CGG | + | chr5.2:70031075-70031094 | None:intergenic | 20.0% |
| !! | AATTGTATTACTTGAAAACA+AGG | + | chr5.2:70034374-70034393 | None:intergenic | 20.0% |
| !! | ATATTTGCAAGAAAGATAAA+AGG | + | chr5.2:70031172-70031191 | None:intergenic | 20.0% |
| !! | ATCAATAGTTTCATAGATTA+TGG | + | chr5.2:70033854-70033873 | None:intergenic | 20.0% |
| !! | ATTGAAATTGAAAATTGTAC+CGG | + | chr5.2:70029993-70030012 | None:intergenic | 20.0% |
| !! | CACTGTTAAAAAACAAATAA+AGG | + | chr5.2:70030125-70030144 | None:intergenic | 20.0% |
| !! | TATTAAGTGAAGAAAGAATA+TGG | + | chr5.2:70032149-70032168 | None:intergenic | 20.0% |
| !! | TCATAAACATAGCTATAAAA+AGG | + | chr5.2:70030521-70030540 | None:intergenic | 20.0% |
| !! | TTCAATATAATTACATGTGT+CGG | - | chr5.2:70030021-70030040 | MS.gene29607:intron | 20.0% |
| !!! | ATTTGTCTAATTTGATTTCT+GGG | + | chr5.2:70031473-70031492 | None:intergenic | 20.0% |
| !!! | CACATAGTTTAATTTAAAAC+TGG | - | chr5.2:70033935-70033954 | MS.gene29607:intron | 20.0% |
| !!! | CTGATTTGGTTTTATATTTA+TGG | - | chr5.2:70034759-70034778 | MS.gene29607:intron | 20.0% |
| !!! | TATTATAAAGAGAAGCATAA+GGG | - | chr5.2:70032915-70032934 | MS.gene29607:intron | 20.0% |
| !!! | TATTTGTCTAATTTGATTTC+TGG | + | chr5.2:70031474-70031493 | None:intergenic | 20.0% |
| !!! | TGATTTATTTTTTGTAGCTA+AGG | - | chr5.2:70030328-70030347 | MS.gene29607:intron | 20.0% |
| !!! | TTATTATAAAGAGAAGCATA+AGG | - | chr5.2:70032914-70032933 | MS.gene29607:intron | 20.0% |
| !!! | TTTTGTTTATTACTGCAATT+AGG | - | chr5.2:70030473-70030492 | MS.gene29607:intron | 20.0% |
| ! | AAAAATAGCAGATAGTGTAA+TGG | + | chr5.2:70033378-70033397 | None:intergenic | 25.0% |
| ! | AAAATAAACTAATGCTGAGT+CGG | - | chr5.2:70032039-70032058 | MS.gene29607:intron | 25.0% |
| ! | AAAATAGCAGATAGTGTAAT+GGG | + | chr5.2:70033377-70033396 | None:intergenic | 25.0% |
| ! | AAATCAGTGACATTAAGATT+GGG | + | chr5.2:70034493-70034512 | None:intergenic | 25.0% |
| ! | AACAAGTACTTAAATATGAG+AGG | + | chr5.2:70032679-70032698 | None:intergenic | 25.0% |
| ! | AATAGCAGTTTGTCTAAATT+TGG | + | chr5.2:70030709-70030728 | None:intergenic | 25.0% |
| ! | AATCAATCAATAATCCATAG+AGG | + | chr5.2:70034585-70034604 | None:intergenic | 25.0% |
| ! | AATGAGGATAATGATTATGT+TGG | - | chr5.2:70032238-70032257 | MS.gene29607:intron | 25.0% |
| ! | ACAACCAATTATTAATCCTT+AGG | + | chr5.2:70030948-70030967 | None:intergenic | 25.0% |
| ! | ACATCAATTATAACCAAAAC+GGG | + | chr5.2:70031074-70031093 | None:intergenic | 25.0% |
| ! | AGAGAAACAAAATGAATTAG+TGG | + | chr5.2:70031692-70031711 | None:intergenic | 25.0% |
| ! | AGCTAATAATATACAAATGC+AGG | - | chr5.2:70032809-70032828 | MS.gene29607:intron | 25.0% |
| ! | ATGAGGATAATGATTATGTT+GGG | - | chr5.2:70032239-70032258 | MS.gene29607:intron | 25.0% |
| ! | ATTGAAAAATACACCATTAG+AGG | + | chr5.2:70033636-70033655 | None:intergenic | 25.0% |
| ! | GAAACTTAATTGTTAGATGT+AGG | - | chr5.2:70031276-70031295 | MS.gene29607:intron | 25.0% |
| ! | GTATAAAAAAAGTGAGCAAA+AGG | + | chr5.2:70033580-70033599 | None:intergenic | 25.0% |
| ! | TAAAAACGCAACAAATTTCA+TGG | - | chr5.2:70029816-70029835 | MS.gene29607:CDS | 25.0% |
| ! | TCACAACATTAGTAACTATA+AGG | - | chr5.2:70032940-70032959 | MS.gene29607:intron | 25.0% |
| ! | TCTCTATGTTATCTTGATTT+GGG | - | chr5.2:70034394-70034413 | MS.gene29607:intron | 25.0% |
| ! | TGGTATGAAAGATTATTGTT+TGG | - | chr5.2:70030234-70030253 | MS.gene29607:CDS | 25.0% |
| ! | TTAAAAAAACAACTATGCAG+TGG | + | chr5.2:70030451-70030470 | None:intergenic | 25.0% |
| ! | TTACTTCTAATTTCTGTTTC+TGG | - | chr5.2:70032349-70032368 | MS.gene29607:intron | 25.0% |
| ! | TTCTCTATGTTATCTTGATT+TGG | - | chr5.2:70034393-70034412 | MS.gene29607:intron | 25.0% |
| ! | TTGCATCATGAACAAAATAA+AGG | + | chr5.2:70031450-70031469 | None:intergenic | 25.0% |
| !! | AAGCTTTTCTTATGTAACAA+AGG | + | chr5.2:70034946-70034965 | None:intergenic | 25.0% |
| !! | ATCAGATTTTTGCTTTCTTT+AGG | - | chr5.2:70034010-70034029 | MS.gene29607:intron | 25.0% |
| !! | TATAGCTTTTGCAAAAAATG+CGG | - | chr5.2:70030635-70030654 | MS.gene29607:intron | 25.0% |
| !! | TCAGATTTTTGCTTTCTTTA+GGG | - | chr5.2:70034011-70034030 | MS.gene29607:intron | 25.0% |
| !!! | ATCCTCATTTTTAAATAGTG+AGG | + | chr5.2:70032227-70032246 | None:intergenic | 25.0% |
| !!! | GATTATTCTTTTTTGACACA+AGG | - | chr5.2:70033666-70033685 | MS.gene29607:intron | 25.0% |
| AAAAAAACTTAGGGTGTGTT+TGG | + | chr5.2:70034156-70034175 | None:intergenic | 30.0% | |
| AAAAATATGGAGTGTATGAG+AGG | + | chr5.2:70031743-70031762 | None:intergenic | 30.0% | |
| AAAGCTCAAGAAACAAAACA+TGG | + | chr5.2:70034858-70034877 | None:intergenic | 30.0% | |
| AAATCAATTTAGTCCTCCTT+AGG | - | chr5.2:70034826-70034845 | MS.gene29607:intron | 30.0% | |
| AACACACCCAAAAAAAACTT+AGG | + | chr5.2:70034166-70034185 | None:intergenic | 30.0% | |
| AACTATATACTGCTCAAGTT+CGG | + | chr5.2:70032526-70032545 | None:intergenic | 30.0% | |
| AAGAGAAACTGTTATGAAAC+TGG | - | chr5.2:70031503-70031522 | MS.gene29607:intron | 30.0% | |
| AATCAATTTAGTCCTCCTTA+GGG | - | chr5.2:70034827-70034846 | MS.gene29607:intron | 30.0% | |
| AATCATTCTGCTTTATGTGA+TGG | - | chr5.2:70031227-70031246 | MS.gene29607:intron | 30.0% | |
| ACACACCCAAAAAAAACTTA+GGG | + | chr5.2:70034165-70034184 | None:intergenic | 30.0% | |
| ACTATGCTGAGTAAAACTAA+AGG | + | chr5.2:70029869-70029888 | None:intergenic | 30.0% | |
| AGCAAAAATCTGATCATTTC+AGG | + | chr5.2:70034004-70034023 | None:intergenic | 30.0% | |
| AGTACTTAAATATGAGAGGA+AGG | + | chr5.2:70032675-70032694 | None:intergenic | 30.0% | |
| ATAGCTATGTTTATGACTCT+AGG | - | chr5.2:70030525-70030544 | MS.gene29607:intron | 30.0% | |
| ATTATAACCAAAACGGGATT+TGG | + | chr5.2:70031068-70031087 | None:intergenic | 30.0% | |
| CAAATCAGTGACATTAAGAT+TGG | + | chr5.2:70034494-70034513 | None:intergenic | 30.0% | |
| CATATATCAACCTAAATTCC+TGG | + | chr5.2:70033899-70033918 | None:intergenic | 30.0% | |
| GAAAACTAATGATCAAATGC+TGG | - | chr5.2:70034624-70034643 | MS.gene29607:intron | 30.0% | |
| GAACATCAATAATCGATAAG+AGG | + | chr5.2:70031014-70031033 | None:intergenic | 30.0% | |
| GACATGGTAAAACACAATAT+TGG | + | chr5.2:70034435-70034454 | None:intergenic | 30.0% | |
| GCAACCTAAGGATTAATAAT+TGG | - | chr5.2:70030941-70030960 | MS.gene29607:intron | 30.0% | |
| TAAAATTCCGCTACACAATA+GGG | + | chr5.2:70030782-70030801 | None:intergenic | 30.0% | |
| TAATATACAAATGCAGGCTT+AGG | - | chr5.2:70032815-70032834 | MS.gene29607:intron | 30.0% | |
| TAATGACCACACCAAAAATA+TGG | + | chr5.2:70031756-70031775 | None:intergenic | 30.0% | |
| TACTAAAATTTGTCCCACAT+CGG | - | chr5.2:70032863-70032882 | MS.gene29607:intron | 30.0% | |
| TAGATGTAGGAACTTAAGAA+TGG | - | chr5.2:70031289-70031308 | MS.gene29607:intron | 30.0% | |
| TAGCAAAATAAAACAGGACA+TGG | + | chr5.2:70034451-70034470 | None:intergenic | 30.0% | |
| TATTGAACAACACTGTCATA+TGG | + | chr5.2:70031840-70031859 | None:intergenic | 30.0% | |
| TCATACTAAATAGTGTGTTG+CGG | + | chr5.2:70030735-70030754 | None:intergenic | 30.0% | |
| TCTATGTTCAAGAGAATCAA+TGG | - | chr5.2:70030214-70030233 | MS.gene29607:CDS | 30.0% | |
| TGAAGAAAGAATATGGAGAT+TGG | + | chr5.2:70032142-70032161 | None:intergenic | 30.0% | |
| TGAATCAAAGTTTAGTATCC+AGG | - | chr5.2:70034920-70034939 | MS.gene29607:CDS | 30.0% | |
| TGAGGATAATGATTATGTTG+GGG | - | chr5.2:70032240-70032259 | MS.gene29607:intron | 30.0% | |
| TGCCTCACTATTTAAAAATG+AGG | - | chr5.2:70032222-70032241 | MS.gene29607:intron | 30.0% | |
| TGTGGCATAGTAATTTAAAG+AGG | - | chr5.2:70030604-70030623 | MS.gene29607:intron | 30.0% | |
| TTGATGTTCGTCTCAATTTA+TGG | - | chr5.2:70031025-70031044 | MS.gene29607:intron | 30.0% | |
| TTGTTAAATAGCAGGTATAG+CGG | - | chr5.2:70030664-70030683 | MS.gene29607:intron | 30.0% | |
| ! | CTTAATTTTCAGCTCAAGTT+CGG | + | chr5.2:70032486-70032505 | None:intergenic | 30.0% |
| ! | GAGCTTTAGTTAAGTTGTTT+GGG | - | chr5.2:70034871-70034890 | MS.gene29607:intron | 30.0% |
| ! | GTTAGTCTGTTTGTTAGTTT+CGG | - | chr5.2:70034305-70034324 | MS.gene29607:intron | 30.0% |
| ! | TCTCATACACTCCATATTTT+TGG | - | chr5.2:70031742-70031761 | MS.gene29607:intron | 30.0% |
| ! | TGAGCTTTAGTTAAGTTGTT+TGG | - | chr5.2:70034870-70034889 | MS.gene29607:intron | 30.0% |
| ! | TGGGTTGAATTGTTTGAAAT+TGG | - | chr5.2:70034890-70034909 | MS.gene29607:intron | 30.0% |
| ! | TTTAAAGTTCACGAACAACT+CGG | + | chr5.2:70033138-70033157 | None:intergenic | 30.0% |
| !! | TAATGTCACTGATTTGATCA+AGG | - | chr5.2:70034498-70034517 | MS.gene29607:CDS | 30.0% |
| !! | TACATTGATTCCTTTCGAAT+TGG | - | chr5.2:70033597-70033616 | MS.gene29607:intron | 30.0% |
| !!! | AACACACCCTAAGTTTTTTT+TGG | - | chr5.2:70034156-70034175 | MS.gene29607:intron | 30.0% |
| !!! | ACACACCCTAAGTTTTTTTT+GGG | - | chr5.2:70034157-70034176 | MS.gene29607:intron | 30.0% |
| !!! | ATGTCCTGTTTTATTTTGCT+AGG | - | chr5.2:70034450-70034469 | MS.gene29607:intron | 30.0% |
| !!! | CCATTTTTTTAACTCGAGTT+CGG | + | chr5.2:70033165-70033184 | None:intergenic | 30.0% |
| !!! | CTTTTTTGACACAAGGATAA+AGG | - | chr5.2:70033673-70033692 | MS.gene29607:intron | 30.0% |
| !!! | GTTTTTTTTGGGTGTGTTTA+TGG | - | chr5.2:70034168-70034187 | MS.gene29607:intron | 30.0% |
| AAAAATACACCATTAGAGGC+AGG | + | chr5.2:70033632-70033651 | None:intergenic | 35.0% | |
| AAAAGCTTACTATGCTGTTG+AGG | - | chr5.2:70031121-70031140 | MS.gene29607:CDS | 35.0% | |
| ACATTTGCTTAGAGATGTGA+AGG | - | chr5.2:70033522-70033541 | MS.gene29607:CDS | 35.0% | |
| ACGTCCTAGCAAAATAAAAC+AGG | + | chr5.2:70034457-70034476 | None:intergenic | 35.0% | |
| AGCGGTTATTGCTTACATAT+CGG | - | chr5.2:70031974-70031993 | MS.gene29607:intron | 35.0% | |
| ATACAGGATCTCATGGTTTA+AGG | + | chr5.2:70033814-70033833 | None:intergenic | 35.0% | |
| ATACATATAGGAAAGGAGTG+GGG | + | chr5.2:70031661-70031680 | None:intergenic | 35.0% | |
| ATGCATAGTTGCATACAGTT+AGG | + | chr5.2:70033284-70033303 | None:intergenic | 35.0% | |
| CATACATATAGGAAAGGAGT+GGG | + | chr5.2:70031662-70031681 | None:intergenic | 35.0% | |
| CCACAACTTGATTAACAACA+AGG | - | chr5.2:70034687-70034706 | MS.gene29607:CDS | 35.0% | |
| CCGAACTCGAGTTAAAAAAA+TGG | - | chr5.2:70033162-70033181 | MS.gene29607:intron | 35.0% | |
| CTAAAATTCCGCTACACAAT+AGG | + | chr5.2:70030783-70030802 | None:intergenic | 35.0% | |
| CTATGAAACTATTGATGCTC+TGG | - | chr5.2:70033858-70033877 | MS.gene29607:intron | 35.0% | |
| CTTTGCTCTGTAGATAGTTT+GGG | + | chr5.2:70031574-70031593 | None:intergenic | 35.0% | |
| GAAATAGGTATGTCATGGAA+TGG | - | chr5.2:70031397-70031416 | MS.gene29607:intron | 35.0% | |
| GACAACAAAACCAATTCGAA+AGG | + | chr5.2:70033610-70033629 | None:intergenic | 35.0% | |
| GACAATCTCGTTTGTCATAT+AGG | - | chr5.2:70033698-70033717 | MS.gene29607:intron | 35.0% | |
| GACAATTAACTCGTTGAACT+TGG | - | chr5.2:70032443-70032462 | MS.gene29607:intron | 35.0% | |
| GATGTTGAACCTAAAGAGTT+GGG | - | chr5.2:70031089-70031108 | MS.gene29607:CDS | 35.0% | |
| GCTCAACAAAGAACATGAAA+GGG | - | chr5.2:70035035-70035054 | MS.gene29607:CDS | 35.0% | |
| GTGTTATGCAATTTCCTCTA+TGG | - | chr5.2:70034568-70034587 | MS.gene29607:intron | 35.0% | |
| GTTTATGGTAAAAAGCTCTG+TGG | - | chr5.2:70034183-70034202 | MS.gene29607:intron | 35.0% | |
| TAATGATTATGTTGGGGAAG+AGG | - | chr5.2:70032246-70032265 | MS.gene29607:intron | 35.0% | |
| TAATTATACCGAGTGTAGCT+TGG | - | chr5.2:70030555-70030574 | MS.gene29607:intron | 35.0% | |
| TACAGGATCTCATGGTTTAA+GGG | + | chr5.2:70033813-70033832 | None:intergenic | 35.0% | |
| TCCTTGTCATCTTCTTCAAA+CGG | + | chr5.2:70030148-70030167 | None:intergenic | 35.0% | |
| TCTAAATTTGGCTATGCTAG+AGG | + | chr5.2:70030697-70030716 | None:intergenic | 35.0% | |
| TGAGGATTCATTGAAGTTGA+AGG | - | chr5.2:70032196-70032215 | MS.gene29607:intron | 35.0% | |
| TGATCAAGAAACCAAATGCT+AGG | + | chr5.2:70030172-70030191 | None:intergenic | 35.0% | |
| TGATGTTGAACCTAAAGAGT+TGG | - | chr5.2:70031088-70031107 | MS.gene29607:CDS | 35.0% | |
| TGCATAGTTGCATACAGTTA+GGG | + | chr5.2:70033283-70033302 | None:intergenic | 35.0% | |
| TGCTCAACAAAGAACATGAA+AGG | - | chr5.2:70035034-70035053 | MS.gene29607:CDS | 35.0% | |
| TTAGTGATGAGAGTTTACCT+AGG | + | chr5.2:70032104-70032123 | None:intergenic | 35.0% | |
| TTGAGGAAATAGGTATGTCA+TGG | - | chr5.2:70031392-70031411 | MS.gene29607:intron | 35.0% | |
| TTTCTGCATCACTGTATGTA+GGG | - | chr5.2:70032374-70032393 | MS.gene29607:intron | 35.0% | |
| TTTCTTATGTAACAAAGGCC+TGG | + | chr5.2:70034941-70034960 | None:intergenic | 35.0% | |
| TTTGGTTGTAGGGTTTAGAA+GGG | - | chr5.2:70034038-70034057 | MS.gene29607:intron | 35.0% | |
| ! | ACAACTATGCAGTGGATTTA+AGG | + | chr5.2:70030443-70030462 | None:intergenic | 35.0% |
| ! | ACAGCATAGTAAGCTTTTGT+AGG | + | chr5.2:70031119-70031138 | None:intergenic | 35.0% |
| ! | AGATCATTTTCTCGCAGTTT+CGG | + | chr5.2:70030383-70030402 | None:intergenic | 35.0% |
| ! | ATTCTGCTTTATGTGATGGA+AGG | - | chr5.2:70031231-70031250 | MS.gene29607:intron | 35.0% |
| ! | GTTATTGTTGTCTGCTGATT+TGG | - | chr5.2:70034745-70034764 | MS.gene29607:CDS | 35.0% |
| ! | TGACAGTGTTGTTCAATAAC+CGG | - | chr5.2:70031842-70031861 | MS.gene29607:intron | 35.0% |
| ! | TTACCTAGGTCGTATGTTTT+AGG | + | chr5.2:70032090-70032109 | None:intergenic | 35.0% |
| ! | TTTTCTGCATCACTGTATGT+AGG | - | chr5.2:70032373-70032392 | MS.gene29607:intron | 35.0% |
| !! | ATAGTGTAATGGGCAAATAG+TGG | + | chr5.2:70033367-70033386 | None:intergenic | 35.0% |
| !! | CCTTGTTGTTAATCAAGTTG+TGG | + | chr5.2:70034690-70034709 | None:intergenic | 35.0% |
| !! | TTGGGAATCAGCTATTTTCT+GGG | - | chr5.2:70033410-70033429 | MS.gene29607:intron | 35.0% |
| !! | TTTGGGAATCAGCTATTTTC+TGG | - | chr5.2:70033409-70033428 | MS.gene29607:intron | 35.0% |
| !! | TTTTGGTTGTAGGGTTTAGA+AGG | - | chr5.2:70034037-70034056 | MS.gene29607:intron | 35.0% |
| !!! | TACACTCCATATTTTTGGTG+TGG | - | chr5.2:70031747-70031766 | MS.gene29607:intron | 35.0% |
| !!! | TGCTTTCTTTAGGGTGTTTT+TGG | - | chr5.2:70034020-70034039 | MS.gene29607:intron | 35.0% |
| !!! | TTAGGGTGTTTTTGGTTGTA+GGG | - | chr5.2:70034028-70034047 | MS.gene29607:intron | 35.0% |
| !!! | TTTAGGGTGTTTTTGGTTGT+AGG | - | chr5.2:70034027-70034046 | MS.gene29607:intron | 35.0% |
| AACAACACTGTCATATGGAC+AGG | + | chr5.2:70031835-70031854 | None:intergenic | 40.0% | |
| AACCAACCTGCAAATGATAC+AGG | + | chr5.2:70033830-70033849 | None:intergenic | 40.0% | |
| AATTGCTGCTCATGAAGTTG+AGG | - | chr5.2:70031375-70031394 | MS.gene29607:CDS | 40.0% | |
| ACCAAATGGTCCAGGAATTT+AGG | - | chr5.2:70033886-70033905 | MS.gene29607:intron | 40.0% | |
| ACCTAAATTCCTGGACCATT+TGG | + | chr5.2:70033890-70033909 | None:intergenic | 40.0% | |
| ACTCCTAAAACATACGACCT+AGG | - | chr5.2:70032084-70032103 | MS.gene29607:intron | 40.0% | |
| AGGGAACACAATTGTCTGTT+AGG | + | chr5.2:70031622-70031641 | None:intergenic | 40.0% | |
| AGGTTGCGAGAAAATGTCAT+GGG | + | chr5.2:70030928-70030947 | None:intergenic | 40.0% | |
| ATATGACTATGCCACATCAG+AGG | + | chr5.2:70030882-70030901 | None:intergenic | 40.0% | |
| ATCCTGTATCATTTGCAGGT+TGG | - | chr5.2:70033825-70033844 | MS.gene29607:CDS | 40.0% | |
| ATGACAAGGATCCTAGCATT+TGG | - | chr5.2:70030158-70030177 | MS.gene29607:intron | 40.0% | |
| ATTGAGGGTTTAGGAGAAGA+AGG | + | chr5.2:70034133-70034152 | None:intergenic | 40.0% | |
| CAAAACATGGTAAAGCCCTA+AGG | + | chr5.2:70034845-70034864 | None:intergenic | 40.0% | |
| CACTTCTAATGAGAGACGAT+AGG | + | chr5.2:70034657-70034676 | None:intergenic | 40.0% | |
| CAGAATCAATGACGTGTAAG+AGG | + | chr5.2:70032178-70032197 | None:intergenic | 40.0% | |
| CATGAGCAGCAATTTCTGAT+TGG | + | chr5.2:70031369-70031388 | None:intergenic | 40.0% | |
| CCACTCCTTTCCTATATGTA+TGG | - | chr5.2:70031660-70031679 | MS.gene29607:intron | 40.0% | |
| CCATACATATAGGAAAGGAG+TGG | + | chr5.2:70031663-70031682 | None:intergenic | 40.0% | |
| CGACTCGATAAGAATTGACT+CGG | + | chr5.2:70033217-70033236 | None:intergenic | 40.0% | |
| GAACCAACTCGACAATAGTT+CGG | - | chr5.2:70032410-70032429 | MS.gene29607:intron | 40.0% | |
| GAAGCTTTCCATCAATGACA+AGG | + | chr5.2:70033791-70033810 | None:intergenic | 40.0% | |
| GAGCAGTATATAGTTCGACT+CGG | - | chr5.2:70032531-70032550 | MS.gene29607:intron | 40.0% | |
| GCAAATGATACAGGATCTCA+TGG | + | chr5.2:70033821-70033840 | None:intergenic | 40.0% | |
| GCAATTAGGAGCTTATGCTA+CGG | - | chr5.2:70030487-70030506 | MS.gene29607:intron | 40.0% | |
| GCTCATGAAGTTGAGGAAAT+AGG | - | chr5.2:70031382-70031401 | MS.gene29607:intron | 40.0% | |
| GCTTTGCTCTGTAGATAGTT+TGG | + | chr5.2:70031575-70031594 | None:intergenic | 40.0% | |
| GTAGGAATTCCCAACTCTTT+AGG | + | chr5.2:70031101-70031120 | None:intergenic | 40.0% | |
| GTGTGCCATACATATAGGAA+AGG | + | chr5.2:70031668-70031687 | None:intergenic | 40.0% | |
| TACATATAGGAAAGGAGTGG+GGG | + | chr5.2:70031660-70031679 | None:intergenic | 40.0% | |
| TACCTTGACCTTGTCATTGA+TGG | - | chr5.2:70033780-70033799 | MS.gene29607:CDS | 40.0% | |
| TAGGTTGCGAGAAAATGTCA+TGG | + | chr5.2:70030929-70030948 | None:intergenic | 40.0% | |
| TCTCATCACTAAACTGCCTT+GGG | - | chr5.2:70032112-70032131 | MS.gene29607:intron | 40.0% | |
| TGAAACTATTGATGCTCTGG+CGG | - | chr5.2:70033861-70033880 | MS.gene29607:intron | 40.0% | |
| TGAGATCCTGTATCATTTGC+AGG | - | chr5.2:70033821-70033840 | MS.gene29607:CDS | 40.0% | |
| TGGGGAAGAGGAGAATAATT+TGG | - | chr5.2:70032258-70032277 | MS.gene29607:intron | 40.0% | |
| TGGGTTTGGCAAAATTACTG+TGG | - | chr5.2:70030586-70030605 | MS.gene29607:intron | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr5.2:70034142-70034161 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr5.2:70034148-70034167 | None:intergenic | 40.0% | |
| TTATGGAAGTTGAAGACCAC+AGG | + | chr5.2:70032979-70032998 | None:intergenic | 40.0% | |
| TTCCATCAATGACAAGGTCA+AGG | + | chr5.2:70033785-70033804 | None:intergenic | 40.0% | |
| TTGAGGGTTTAGGAGAAGAA+GGG | + | chr5.2:70034132-70034151 | None:intergenic | 40.0% | |
| TTGGTTGTAGGGTTTAGAAG+GGG | - | chr5.2:70034039-70034058 | MS.gene29607:intron | 40.0% | |
| TTTGTAGCCCTATTGTGTAG+CGG | - | chr5.2:70030772-70030791 | MS.gene29607:intron | 40.0% | |
| ! | CTATGTTCCAAATCCCGTTT+TGG | - | chr5.2:70031058-70031077 | MS.gene29607:intron | 40.0% |
| ! | GATTTGATCAAGGCTTTTGC+AGG | - | chr5.2:70034508-70034527 | MS.gene29607:CDS | 40.0% |
| ! | GCACTGACACTTCTGATTAA+AGG | + | chr5.2:70030064-70030083 | None:intergenic | 40.0% |
| ! | GGTCAGTGTTGTTAAATAGC+AGG | - | chr5.2:70030656-70030675 | MS.gene29607:intron | 40.0% |
| ! | TGACATTTTCTCGCAACCTA+AGG | - | chr5.2:70030929-70030948 | MS.gene29607:intron | 40.0% |
| ! | TGTTAGTTTCGGCTTAAGCT+GGG | - | chr5.2:70034316-70034335 | MS.gene29607:intron | 40.0% |
| ! | TTGTTAGTTTCGGCTTAAGC+TGG | - | chr5.2:70034315-70034334 | MS.gene29607:intron | 40.0% |
| !! | ACTTTGGATTGGCCGAATTA+CGG | + | chr5.2:70030858-70030877 | None:intergenic | 40.0% |
| !! | AGTATATAGTTCGACTCGGT+AGG | - | chr5.2:70032535-70032554 | MS.gene29607:intron | 40.0% |
| !! | CTTACACGTCATTGATTCTG+AGG | - | chr5.2:70032178-70032197 | MS.gene29607:intron | 40.0% |
| !! | GAACTATTGTCGAGTTGGTT+CGG | + | chr5.2:70032411-70032430 | None:intergenic | 40.0% |
| !! | TTTTGTTGTCCTGCCTCTAA+TGG | - | chr5.2:70033620-70033639 | MS.gene29607:intron | 40.0% |
| AAAGCTCTGTGGATAGTCAG+AGG | - | chr5.2:70034194-70034213 | MS.gene29607:intron | 45.0% | |
| AAATGTTCCACTCCTGCACA+AGG | + | chr5.2:70033508-70033527 | None:intergenic | 45.0% | |
| AACATGGTAAAGCCCTAAGG+AGG | + | chr5.2:70034842-70034861 | None:intergenic | 45.0% | |
| AATGTTCCACTCCTGCACAA+GGG | + | chr5.2:70033507-70033526 | None:intergenic | 45.0% | |
| ACACAATTGTCTGTTAGGCC+AGG | + | chr5.2:70031617-70031636 | None:intergenic | 45.0% | |
| AGACAATTGTGTTCCCTTCC+TGG | - | chr5.2:70031625-70031644 | MS.gene29607:intron | 45.0% | |
| AGCTTACTATGCTGTTGAGG+AGG | - | chr5.2:70031124-70031143 | MS.gene29607:CDS | 45.0% | |
| AGTTCACGAACAACTCGGTT+CGG | + | chr5.2:70033133-70033152 | None:intergenic | 45.0% | |
| ATACCGAGTGTAGCTTGGTT+GGG | - | chr5.2:70030560-70030579 | MS.gene29607:intron | 45.0% | |
| ATAGCATAGCAGCGCTATAC+CGG | + | chr5.2:70031864-70031883 | None:intergenic | 45.0% | |
| ATGCTGAGTCGGTGATTAGA+TGG | - | chr5.2:70032050-70032069 | MS.gene29607:intron | 45.0% | |
| CACAATTGTCTGTTAGGCCA+GGG | + | chr5.2:70031616-70031635 | None:intergenic | 45.0% | |
| CTCTCATCACTAAACTGCCT+TGG | - | chr5.2:70032111-70032130 | MS.gene29607:intron | 45.0% | |
| CTGCTATGCTATTGCACATC+AGG | - | chr5.2:70031872-70031891 | MS.gene29607:intron | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr5.2:70034149-70034168 | None:intergenic | 45.0% | |
| CTTCTTGGTTCCTCGTTCAA+AGG | - | chr5.2:70029941-70029960 | MS.gene29607:intron | 45.0% | |
| GAGTCGAATTCATCTGAGCT+CGG | + | chr5.2:70033242-70033261 | None:intergenic | 45.0% | |
| GCAAAACTCACAGCCTTGAA+GGG | - | chr5.2:70033726-70033745 | MS.gene29607:intron | 45.0% | |
| GCCGTTTGAAGAAGATGACA+AGG | - | chr5.2:70030144-70030163 | MS.gene29607:intron | 45.0% | |
| GTAAACGAGGTGTGTGAGAA+GGG | - | chr5.2:70034272-70034291 | MS.gene29607:intron | 45.0% | |
| GTGATTGAACTCACCGATGT+GGG | + | chr5.2:70032879-70032898 | None:intergenic | 45.0% | |
| GTGGTGTGTGCCATACATAT+AGG | + | chr5.2:70031673-70031692 | None:intergenic | 45.0% | |
| GTGTGAGAAGGGAAATGAGA+TGG | - | chr5.2:70034283-70034302 | MS.gene29607:intron | 45.0% | |
| GTTCCGAACTATTGTCGAGT+TGG | + | chr5.2:70032416-70032435 | None:intergenic | 45.0% | |
| GTTGAGGAGGTTAAAGAGGT+GGG | - | chr5.2:70031137-70031156 | MS.gene29607:CDS | 45.0% | |
| TACTCTTCTTTCCCTTGTGC+AGG | - | chr5.2:70033493-70033512 | MS.gene29607:intron | 45.0% | |
| TAGTTGCATACAGTTAGGGC+TGG | + | chr5.2:70033279-70033298 | None:intergenic | 45.0% | |
| TATACCGAGTGTAGCTTGGT+TGG | - | chr5.2:70030559-70030578 | MS.gene29607:intron | 45.0% | |
| TCACAGAGAATATGCTTCCC+TGG | - | chr5.2:70031596-70031615 | MS.gene29607:intron | 45.0% | |
| TCGCGGAAAGTGGAAAATAG+CGG | + | chr5.2:70030810-70030829 | None:intergenic | 45.0% | |
| TCTTGCATCCAAACCCTTCA+AGG | + | chr5.2:70033742-70033761 | None:intergenic | 45.0% | |
| TGACATTAAGATTGGGCAGC+AGG | + | chr5.2:70034486-70034505 | None:intergenic | 45.0% | |
| TGCAAAACTCACAGCCTTGA+AGG | - | chr5.2:70033725-70033744 | MS.gene29607:intron | 45.0% | |
| TGCCACTCAGAAGAGTCAAA+AGG | - | chr5.2:70031330-70031349 | MS.gene29607:intron | 45.0% | |
| TGCCATTGCTCACCGTAATT+CGG | - | chr5.2:70030843-70030862 | MS.gene29607:intron | 45.0% | |
| TGCTGAGTCGGTGATTAGAT+GGG | - | chr5.2:70032051-70032070 | MS.gene29607:intron | 45.0% | |
| TGCTGTTGAGGAGGTTAAAG+AGG | - | chr5.2:70031133-70031152 | MS.gene29607:CDS | 45.0% | |
| TGGTTGTAGGGTTTAGAAGG+GGG | - | chr5.2:70034040-70034059 | MS.gene29607:intron | 45.0% | |
| TGTGATTGAACTCACCGATG+TGG | + | chr5.2:70032880-70032899 | None:intergenic | 45.0% | |
| TGTTGAGGAGGTTAAAGAGG+TGG | - | chr5.2:70031136-70031155 | MS.gene29607:CDS | 45.0% | |
| TTCCACTACCACTGCAATAG+CGG | - | chr5.2:70031935-70031954 | MS.gene29607:intron | 45.0% | |
| ! | AATCCAAAGTGCCTCTGATG+TGG | - | chr5.2:70030868-70030887 | MS.gene29607:intron | 45.0% |
| ! | GTAGCTAAGGAGCATGTTGT+GGG | - | chr5.2:70030341-70030360 | MS.gene29607:intron | 45.0% |
| ! | GTTAGTTTCGGCTTAAGCTG+GGG | - | chr5.2:70034317-70034336 | MS.gene29607:intron | 45.0% |
| ! | TAGCTAAGGAGCATGTTGTG+GGG | - | chr5.2:70030342-70030361 | MS.gene29607:intron | 45.0% |
| ! | TGTAGCTAAGGAGCATGTTG+TGG | - | chr5.2:70030340-70030359 | MS.gene29607:intron | 45.0% |
| !! | AAAAGGCACCTCTGTTGCAA+GGG | + | chr5.2:70033563-70033582 | None:intergenic | 45.0% |
| !! | ACATCAGAGGCACTTTGGAT+TGG | + | chr5.2:70030869-70030888 | None:intergenic | 45.0% |
| !! | AGCTAGCAAGTTGGTTAGAG+GGG | - | chr5.2:70034219-70034238 | MS.gene29607:intron | 45.0% |
| !! | GACCTTTTGACTCTTCTGAG+TGG | + | chr5.2:70031335-70031354 | None:intergenic | 45.0% |
| !! | GAGCTAGCAAGTTGGTTAGA+GGG | - | chr5.2:70034218-70034237 | MS.gene29607:intron | 45.0% |
| !! | GTAGCTGTTGGTGATATCGA+CGG | + | chr5.2:70029969-70029988 | None:intergenic | 45.0% |
| !! | GTGTAATGGGCAAATAGTGG+AGG | + | chr5.2:70033364-70033383 | None:intergenic | 45.0% |
| !! | TAGCGTATCGACTTTCGTTG+CGG | + | chr5.2:70031909-70031928 | None:intergenic | 45.0% |
| !! | TGAGCTAGCAAGTTGGTTAG+AGG | - | chr5.2:70034217-70034236 | MS.gene29607:intron | 45.0% |
| !! | ACATATTTATATTTATTTAT+TGG | - | chr5.2:70032585-70032604 | MS.gene29607:intron | 5.0% |
| !!! | ATTTTCATATTTTTTTATAT+TGG | - | chr5.2:70030264-70030283 | MS.gene29607:CDS | 5.0% |
| !!! | TTTTCATATTTTTTTATATT+GGG | - | chr5.2:70030265-70030284 | MS.gene29607:CDS | 5.0% |
| !!! | TTTTTATAAATAAAATCAAA+AGG | - | chr5.2:70033026-70033045 | MS.gene29607:intron | 5.0% |
| ACTACCACTGCAATAGCGGT+GGG | - | chr5.2:70031939-70031958 | MS.gene29607:intron | 50.0% | |
| ACTCACAGCCTTGAAGGGTT+TGG | - | chr5.2:70033731-70033750 | MS.gene29607:intron | 50.0% | |
| ACTGTGTCAATCGCGGAAAG+TGG | + | chr5.2:70030820-70030839 | None:intergenic | 50.0% | |
| AGGGTTTAGGAGAAGAAGGG+AGG | + | chr5.2:70034129-70034148 | None:intergenic | 50.0% | |
| ATGCTCTGGCGGTTACCAAA+TGG | - | chr5.2:70033872-70033891 | MS.gene29607:intron | 50.0% | |
| CAGCTCAAGTTCGGCTCATT+TGG | + | chr5.2:70032477-70032496 | None:intergenic | 50.0% | |
| CATTAGCACCCTTGCAACAG+AGG | - | chr5.2:70033552-70033571 | MS.gene29607:CDS | 50.0% | |
| CTCCAGAAAGAATGGTGAGG+TGG | + | chr5.2:70031718-70031737 | None:intergenic | 50.0% | |
| CTTCCTGCTGTACTTGGTAC+AGG | + | chr5.2:70035081-70035100 | None:intergenic | 50.0% | |
| GAGAGGAGCTCCAGAAAGAA+TGG | + | chr5.2:70031726-70031745 | None:intergenic | 50.0% | |
| GAGCTCCAGAAAGAATGGTG+AGG | + | chr5.2:70031721-70031740 | None:intergenic | 50.0% | |
| GATATCACCAACAGCTACGC+CGG | - | chr5.2:70029971-70029990 | MS.gene29607:intron | 50.0% | |
| GCTGAGTCGGTGATTAGATG+GGG | - | chr5.2:70032052-70032071 | MS.gene29607:intron | 50.0% | |
| GGGTTTAGGAGAAGAAGGGA+GGG | + | chr5.2:70034128-70034147 | None:intergenic | 50.0% | |
| GGTAAACGAGGTGTGTGAGA+AGG | - | chr5.2:70034271-70034290 | MS.gene29607:intron | 50.0% | |
| GGTTGTAGGGTTTAGAAGGG+GGG | - | chr5.2:70034041-70034060 | MS.gene29607:intron | 50.0% | |
| GGTTTAGGAGAAGAAGGGAG+GGG | + | chr5.2:70034127-70034146 | None:intergenic | 50.0% | |
| GTTGTAGGGTTTAGAAGGGG+GGG | - | chr5.2:70034042-70034061 | MS.gene29607:intron | 50.0% | |
| GTTGTGGGGTGGTATAGTAC+TGG | - | chr5.2:70030356-70030375 | MS.gene29607:intron | 50.0% | |
| TCAGAGGTGAGCTAGCAAGT+TGG | - | chr5.2:70034210-70034229 | MS.gene29607:intron | 50.0% | |
| TCGGCTTAAGCTGGGGTTAT+TGG | - | chr5.2:70034324-70034343 | MS.gene29607:intron | 50.0% | |
| TGCAATAGCGGTGGGCATAT+TGG | - | chr5.2:70031947-70031966 | MS.gene29607:intron | 50.0% | |
| TGCATCACTGTATGTAGGGC+TGG | - | chr5.2:70032378-70032397 | MS.gene29607:intron | 50.0% | |
| TGCCACCTCACCATTCTTTC+TGG | - | chr5.2:70031713-70031732 | MS.gene29607:intron | 50.0% | |
| TTCTTTCCCTTGTGCAGGAG+TGG | - | chr5.2:70033498-70033517 | MS.gene29607:intron | 50.0% | |
| TTGTAGGGTTTAGAAGGGGG+GGG | - | chr5.2:70034043-70034062 | MS.gene29607:intron | 50.0% | |
| ! | AATTGTACCGGCGTAGCTGT+TGG | + | chr5.2:70029981-70030000 | None:intergenic | 50.0% |
| ! | TATGGAGATTGGAGTGCCCA+AGG | + | chr5.2:70032131-70032150 | None:intergenic | 50.0% |
| !! | ATGCCACATCAGAGGCACTT+TGG | + | chr5.2:70030874-70030893 | None:intergenic | 50.0% |
| !! | CAAAAGGCACCTCTGTTGCA+AGG | + | chr5.2:70033564-70033583 | None:intergenic | 50.0% |
| !! | CTCTGTTGCAAGGGTGCTAA+TGG | + | chr5.2:70033554-70033573 | None:intergenic | 50.0% |
| !! | GCTAGCAAGTTGGTTAGAGG+GGG | - | chr5.2:70034220-70034239 | MS.gene29607:intron | 50.0% |
| !!! | AGGTCGTCGCTTTTTTCCTG+TGG | - | chr5.2:70032960-70032979 | MS.gene29607:intron | 50.0% |
| AGAGAGGGATCACGTGGAGT+CGG | - | chr5.2:70034245-70034264 | MS.gene29607:intron | 55.0% | |
| AGTGTAGCTTGGTTGGGTGG+TGG | - | chr5.2:70030566-70030585 | MS.gene29607:intron | 55.0% | |
| ATCGACGGTGCCTTTGAACG+AGG | + | chr5.2:70029954-70029973 | None:intergenic | 55.0% | |
| CACCGCTATTGCAGTGGTAG+TGG | + | chr5.2:70031940-70031959 | None:intergenic | 55.0% | |
| CACTACCACTGCAATAGCGG+TGG | - | chr5.2:70031938-70031957 | MS.gene29607:intron | 55.0% | |
| CCACCCAACCAAGCTACACT+CGG | + | chr5.2:70030566-70030585 | None:intergenic | 55.0% | |
| CGCGTCGTTGGAGTTCTTCT+TGG | - | chr5.2:70029926-70029945 | MS.gene29607:intron | 55.0% | |
| GAAAGGAGTGGGGGAGTTAG+TGG | + | chr5.2:70031651-70031670 | None:intergenic | 55.0% | |
| GACGCGTTTGCGAGTGTCTT+TGG | + | chr5.2:70029912-70029931 | None:intergenic | 55.0% | |
| GGCACTCACTGTGTCAATCG+CGG | + | chr5.2:70030827-70030846 | None:intergenic | 55.0% | |
| GGCCGAATTACGGTGAGCAA+TGG | + | chr5.2:70030848-70030867 | None:intergenic | 55.0% | |
| GGTGGGCATATTGGCGATAG+CGG | - | chr5.2:70031956-70031975 | MS.gene29607:intron | 55.0% | |
| GTGCCTGTACCAAGTACAGC+AGG | - | chr5.2:70035075-70035094 | MS.gene29607:CDS | 55.0% | |
| GTGTAGCTTGGTTGGGTGGT+GGG | - | chr5.2:70030567-70030586 | MS.gene29607:intron | 55.0% | |
| TAGGAGAAGAAGGGAGGGGA+GGG | + | chr5.2:70034123-70034142 | None:intergenic | 55.0% | |
| TATGCCCACCGCTATTGCAG+TGG | + | chr5.2:70031946-70031965 | None:intergenic | 55.0% | |
| TGGCGGTTACCAAATGGTCC+AGG | - | chr5.2:70033878-70033897 | MS.gene29607:intron | 55.0% | |
| TGGTTAGAGGGGGAGAGAGA+GGG | - | chr5.2:70034230-70034249 | MS.gene29607:intron | 55.0% | |
| TGTAGGGTTTAGAAGGGGGG+GGG | - | chr5.2:70034044-70034063 | MS.gene29607:intron | 55.0% | |
| TTAGGAGAAGAAGGGAGGGG+AGG | + | chr5.2:70034124-70034143 | None:intergenic | 55.0% | |
| TTGGTTAGAGGGGGAGAGAG+AGG | - | chr5.2:70034229-70034248 | MS.gene29607:intron | 55.0% | |
| ! | CTAAGGAGCATGTTGTGGGG+TGG | - | chr5.2:70030345-70030364 | MS.gene29607:intron | 55.0% |
| ! | GACTCGGTAGGTTCATGAGC+TGG | - | chr5.2:70032547-70032566 | MS.gene29607:intron | 55.0% |
| CCGAGTGTAGCTTGGTTGGG+TGG | - | chr5.2:70030563-70030582 | MS.gene29607:intron | 60.0% | |
| GACACTCGCAAACGCGTCGT+TGG | - | chr5.2:70029914-70029933 | MS.gene29607:intron | 60.0% | |
| GAGAGGGATCACGTGGAGTC+GGG | - | chr5.2:70034246-70034265 | MS.gene29607:intron | 60.0% | |
| GGGGAGTTAGTGGCCAGGAA+GGG | + | chr5.2:70031641-70031660 | None:intergenic | 60.0% | |
| TGGAGTCGGGAGGGTAAACG+AGG | - | chr5.2:70034259-70034278 | MS.gene29607:intron | 60.0% | |
| !! | ACAACTCGGTTCGGCTCGTC+AGG | + | chr5.2:70033124-70033143 | None:intergenic | 60.0% |
| !! | GCTTGGTTGGGTGGTGGGTT+TGG | - | chr5.2:70030572-70030591 | MS.gene29607:intron | 60.0% |
| AGGGATCACGTGGAGTCGGG+AGG | - | chr5.2:70034249-70034268 | MS.gene29607:intron | 65.0% | |
| GAGTGGGGGAGTTAGTGGCC+AGG | + | chr5.2:70031646-70031665 | None:intergenic | 65.0% | |
| GGGATCACGTGGAGTCGGGA+GGG | - | chr5.2:70034250-70034269 | MS.gene29607:intron | 65.0% | |
| GGGGAGAGAGAGGGATCACG+TGG | - | chr5.2:70034239-70034258 | MS.gene29607:intron | 65.0% | |
| GGGGGAGTTAGTGGCCAGGA+AGG | + | chr5.2:70031642-70031661 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 70029806 | 70035104 | 70029806 | ID=MS.gene29607 |
| chr5.2 | mRNA | 70029806 | 70035104 | 70029806 | ID=MS.gene29607.t1;Parent=MS.gene29607 |
| chr5.2 | exon | 70034918 | 70035104 | 70034918 | ID=MS.gene29607.t1.exon1;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70034918 | 70035104 | 70034918 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70034675 | 70034767 | 70034675 | ID=MS.gene29607.t1.exon2;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70034675 | 70034767 | 70034675 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70034484 | 70034565 | 70034484 | ID=MS.gene29607.t1.exon3;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70034484 | 70034565 | 70034484 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70033756 | 70033852 | 70033756 | ID=MS.gene29607.t1.exon4;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70033756 | 70033852 | 70033756 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70033507 | 70033582 | 70033507 | ID=MS.gene29607.t1.exon5;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70033507 | 70033582 | 70033507 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70031337 | 70031395 | 70031337 | ID=MS.gene29607.t1.exon6;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70031337 | 70031395 | 70031337 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70031068 | 70031190 | 70031068 | ID=MS.gene29607.t1.exon7;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70031068 | 70031190 | 70031068 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70030381 | 70030438 | 70030381 | ID=MS.gene29607.t1.exon8;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70030381 | 70030438 | 70030381 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70030202 | 70030287 | 70030202 | ID=MS.gene29607.t1.exon9;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70030202 | 70030287 | 70030202 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| chr5.2 | exon | 70029806 | 70029877 | 70029806 | ID=MS.gene29607.t1.exon10;Parent=MS.gene29607.t1 |
| chr5.2 | CDS | 70029806 | 70029877 | 70029806 | ID=cds.MS.gene29607.t1;Parent=MS.gene29607.t1 |
| Gene Sequence |
| Protein sequence |
