Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031999.t1 | XP_003600861.1 | 99.7 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 8.20E-167 | 596.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031999.t1 | O24412 | 89.0 | 308 | 34 | 0 | 1 | 308 | 1 | 308 | 5.2e-154 | 545.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031999.t1 | G7JB60 | 99.7 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 5.9e-167 | 596.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031999.t1 | MTR_3g070180 | 99.676 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 0.0 | 624 |
| MS.gene031999.t1 | MTR_5g081980 | 95.146 | 309 | 15 | 0 | 1 | 309 | 1 | 309 | 0.0 | 600 |
| MS.gene031999.t1 | MTR_3g070190 | 33.210 | 271 | 164 | 6 | 19 | 285 | 25 | 282 | 2.74e-35 | 129 |
| MS.gene031999.t1 | MTR_5g082000 | 31.206 | 282 | 177 | 6 | 8 | 285 | 10 | 278 | 1.15e-31 | 119 |
| MS.gene031999.t1 | MTR_3g009270 | 25.574 | 305 | 189 | 6 | 10 | 285 | 4 | 299 | 9.93e-23 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031999.t1 | AT5G05780 | 88.961 | 308 | 34 | 0 | 1 | 308 | 1 | 308 | 0.0 | 572 |
| MS.gene031999.t1 | AT3G11270 | 88.852 | 305 | 34 | 0 | 1 | 305 | 1 | 305 | 0.0 | 566 |
| MS.gene031999.t1 | AT5G05780 | 87.987 | 308 | 34 | 1 | 1 | 308 | 1 | 305 | 0.0 | 561 |
| MS.gene031999.t1 | AT3G11270 | 87.869 | 305 | 34 | 1 | 1 | 305 | 1 | 302 | 0.0 | 554 |
| MS.gene031999.t1 | AT2G39990 | 28.807 | 243 | 156 | 6 | 10 | 248 | 21 | 250 | 5.00e-26 | 105 |
| MS.gene031999.t1 | AT4G26430 | 24.606 | 317 | 200 | 7 | 10 | 296 | 4 | 311 | 5.06e-22 | 94.4 |
| MS.gene031999.t1 | AT5G56280 | 23.885 | 314 | 200 | 7 | 10 | 295 | 4 | 306 | 6.27e-21 | 91.7 |
Find 73 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTGATCTTGTTATTGA+TGG | 0.232829 | 3.4:-69888051 | MS.gene031999:CDS |
| GTATAGGATCTCATGGTTTA+AGG | 0.233509 | 3.4:+69888020 | None:intergenic |
| ATTATAACCAAAACGGGATT+TGG | 0.243791 | 3.4:+69888790 | None:intergenic |
| TCCATGTTTAAGAGAATAAA+TGG | 0.261453 | 3.4:-69889266 | MS.gene031999:intron |
| AACACGCTTGCGAGTATCTT+TGG | 0.301893 | 3.4:+69891316 | None:intergenic |
| GCTCATGAGGTTGAGGAAAT+AGG | 0.315086 | 3.4:-69888503 | MS.gene031999:intron |
| GCACATGCACAAAGACCTTT+TGG | 0.348447 | 3.4:+69888540 | None:intergenic |
| CTATGTTCCAAATCCCGTTT+TGG | 0.360839 | 3.4:-69888797 | MS.gene031999:CDS |
| GTTGGAATTCCCAACTCCTT+AGG | 0.364240 | 3.4:+69888757 | None:intergenic |
| CTCGGTTGCAAGGGTGCTAA+TGG | 0.377226 | 3.4:+69888303 | None:intergenic |
| TCTTGCATCCAAACCTTTCA+AGG | 0.385551 | 3.4:+69888092 | None:intergenic |
| ATCCGAACCAGCGTAGCTAT+TGG | 0.391771 | 3.4:+69891247 | None:intergenic |
| ACATCAATTATAACCAAAAC+GGG | 0.396892 | 3.4:+69888784 | None:intergenic |
| GATACTCGCAAGCGTGTTGT+CGG | 0.410026 | 3.4:-69891311 | MS.gene031999:CDS |
| AGATCAGAGACATTGAGATT+TGG | 0.417947 | 3.4:+69887749 | None:intergenic |
| ACTCACGGCCTTGAAAGGTT+TGG | 0.421231 | 3.4:-69888100 | MS.gene031999:CDS |
| ATGACAAGGACCCTAGCATT+TGG | 0.429351 | 3.4:-69889322 | MS.gene031999:CDS |
| GCTGCACTTGGTACTGGTGC+TGG | 0.431498 | 3.4:+69887357 | None:intergenic |
| AACATCAATTATAACCAAAA+CGG | 0.431934 | 3.4:+69888783 | None:intergenic |
| AGACATTGAGATTTGGTAGC+AGG | 0.443560 | 3.4:+69887756 | None:intergenic |
| TCCTTGTCATCTTCTTCAAA+AGG | 0.445298 | 3.4:+69889335 | None:intergenic |
| GAAAATGACCTCGACATTCA+TGG | 0.450178 | 3.4:-69889119 | MS.gene031999:CDS |
| CAGGAGTGGAACACTTGCTC+AGG | 0.452480 | 3.4:-69888342 | MS.gene031999:CDS |
| GATGTTGAACCTAAGGAGTT+GGG | 0.454883 | 3.4:-69888766 | MS.gene031999:CDS |
| TTGCTTGGTTCTACTTTCAA+AGG | 0.455683 | 3.4:-69891284 | MS.gene031999:CDS |
| GTACCAAGTGCAGCTGCATA+AGG | 0.470014 | 3.4:-69887348 | None:intergenic |
| TGATGTTGAACCTAAGGAGT+TGG | 0.470055 | 3.4:-69888767 | MS.gene031999:CDS |
| TATAGGATCTCATGGTTTAA+GGG | 0.477057 | 3.4:+69888021 | None:intergenic |
| TATGCAGCTGCACTTGGTAC+TGG | 0.477744 | 3.4:+69887351 | None:intergenic |
| TATAATTGATGTTGAACCTA+AGG | 0.485322 | 3.4:-69888773 | MS.gene031999:CDS |
| AACAAACCTGCAGATGGTAT+AGG | 0.490745 | 3.4:+69888004 | None:intergenic |
| GTGGTGGGGTGGTATAGCAC+TGG | 0.497402 | 3.4:-69889155 | MS.gene031999:CDS |
| TTCCATCAATAACAAGATCA+AGG | 0.509830 | 3.4:+69888049 | None:intergenic |
| AAACCTTATGCAGCTGCACT+TGG | 0.510034 | 3.4:+69887345 | None:intergenic |
| CAATGTCTCTGATCTTATCA+AGG | 0.514069 | 3.4:-69887741 | MS.gene031999:CDS |
| TGCTGTTGAGGAGGTTAAAG+AGG | 0.520637 | 3.4:-69888722 | MS.gene031999:intron |
| TGGTCGAGAAACCAAATGCT+AGG | 0.522788 | 3.4:+69889311 | None:intergenic |
| TGCTCAACAAAGAACATGAA+AGG | 0.527873 | 3.4:-69887395 | MS.gene031999:CDS |
| CCTTGTTGTTAATCAAGTTG+TGG | 0.533219 | 3.4:+69887560 | None:intergenic |
| ATGCAAGACTTAAAGAGATA+AGG | 0.533289 | 3.4:-69888077 | MS.gene031999:CDS |
| GGAAAACTCACGGCCTTGAA+AGG | 0.535505 | 3.4:-69888105 | MS.gene031999:CDS |
| ACCATTTATTCTCTTAAACA+TGG | 0.539672 | 3.4:+69889265 | None:intergenic |
| GATCGCTGCTCATGAGGTTG+AGG | 0.541431 | 3.4:-69888510 | MS.gene031999:CDS |
| AAAATGACCTCGACATTCAT+GGG | 0.547978 | 3.4:-69889118 | MS.gene031999:CDS |
| TGCTACTCAGAAAAGCCAAA+AGG | 0.554388 | 3.4:-69888555 | MS.gene031999:CDS |
| GCTCAACAAAGAACATGAAA+GGG | 0.556354 | 3.4:-69887394 | MS.gene031999:CDS |
| TGAGATCCTATACCATCTGC+AGG | 0.565146 | 3.4:-69888010 | MS.gene031999:intron |
| TACAGCAAAGGAGCATGTGG+TGG | 0.565219 | 3.4:-69889171 | MS.gene031999:intron |
| GATGTTTCCAATAGCTACGC+TGG | 0.569599 | 3.4:-69891254 | MS.gene031999:intron |
| ACAGCAAAGGAGCATGTGGT+GGG | 0.572446 | 3.4:-69889170 | MS.gene031999:intron |
| GCAGATGGTATAGGATCTCA+TGG | 0.574067 | 3.4:+69888013 | None:intergenic |
| AAAAGCATACTATGCTGTTG+AGG | 0.577045 | 3.4:-69888734 | MS.gene031999:CDS |
| ACGTTCGATCGAGAAGGTGG+TGG | 0.579416 | 3.4:-69891387 | MS.gene031999:CDS |
| ATCACGTTCGATCGAGAAGG+TGG | 0.579469 | 3.4:-69891390 | MS.gene031999:CDS |
| CATTAGCACCCTTGCAACCG+AGG | 0.585610 | 3.4:-69888302 | MS.gene031999:intron |
| ACACTTGCTCAGGGATGTGA+AGG | 0.595095 | 3.4:-69888332 | MS.gene031999:CDS |
| CTCATCACGTTCGATCGAGA+AGG | 0.595224 | 3.4:-69891393 | MS.gene031999:CDS |
| CAAAGGAGCATGTGGTGGGG+TGG | 0.599420 | 3.4:-69889166 | MS.gene031999:CDS |
| ATGAGAAACAAACCTGCAGA+TGG | 0.599707 | 3.4:+69887998 | None:intergenic |
| CCACAACTTGATTAACAACA+AGG | 0.604169 | 3.4:-69887560 | MS.gene031999:intron |
| GAAAACGAATGATATGATGC+TGG | 0.610132 | 3.4:-69887623 | MS.gene031999:CDS |
| ATCAGAGATCGCTGCTCATG+AGG | 0.616804 | 3.4:-69888516 | MS.gene031999:CDS |
| AGCATACTATGCTGTTGAGG+AGG | 0.622035 | 3.4:-69888731 | MS.gene031999:CDS |
| ATAGGTGAGCGGAAAACTCA+CGG | 0.624628 | 3.4:-69888115 | MS.gene031999:intron |
| GGTCGAGAAACCAAATGCTA+GGG | 0.629605 | 3.4:+69889312 | None:intergenic |
| GTTTACAGCAAAGGAGCATG+TGG | 0.644927 | 3.4:-69889174 | MS.gene031999:intron |
| TAAATAACCCATGAATGTCG+AGG | 0.645744 | 3.4:+69889111 | None:intergenic |
| ACATTGCTTCGTGATAATTG+TGG | 0.656481 | 3.4:+69889291 | None:intergenic |
| CACTTCTAATGAGAGACGAT+AGG | 0.662773 | 3.4:+69887593 | None:intergenic |
| AGGAGTGGAACACTTGCTCA+GGG | 0.663636 | 3.4:-69888341 | MS.gene031999:CDS |
| GTAGCTATTGGAAACATCAA+CGG | 0.667938 | 3.4:+69891259 | None:intergenic |
| ACGATGCTGAGCAACACTAG+AGG | 0.680391 | 3.4:+69891359 | None:intergenic |
| CAGCAAAGGAGCATGTGGTG+GGG | 0.698587 | 3.4:-69889169 | MS.gene031999:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATTTGTAAATTTAG+TGG | - | chr3.4:69889766-69889785 | MS.gene031999:intron | 10.0% |
| !! | AATTACTTCAAATATAAATT+TGG | - | chr3.4:69889310-69889329 | MS.gene031999:CDS | 10.0% |
| !!! | AAGTTTAATAATTTTATCAT+GGG | + | chr3.4:69890093-69890112 | None:intergenic | 10.0% |
| !!! | ACTAAATTTACAAATATTTT+TGG | + | chr3.4:69889767-69889786 | None:intergenic | 10.0% |
| !!! | CTAAATTTACAAATATTTTT+GGG | + | chr3.4:69889766-69889785 | None:intergenic | 10.0% |
| !! | AAAAAAGAAAATACATTTAC+TGG | + | chr3.4:69888563-69888582 | None:intergenic | 15.0% |
| !! | AATAAATAAGAATCTGTTTA+AGG | + | chr3.4:69890503-69890522 | None:intergenic | 15.0% |
| !! | TTTAAATTATTTATGTGAAG+AGG | - | chr3.4:69887689-69887708 | MS.gene031999:intron | 15.0% |
| !!! | GAAGTTTAATAATTTTATCA+TGG | + | chr3.4:69890094-69890113 | None:intergenic | 15.0% |
| !!! | TATTTTGTTTGTTTTTACTT+GGG | - | chr3.4:69890335-69890354 | MS.gene031999:intron | 15.0% |
| !!! | TTATTTTGTTTGTTTTTACT+TGG | - | chr3.4:69890334-69890353 | MS.gene031999:intron | 15.0% |
| !!! | TTTTTACATAAAACAAAATC+AGG | + | chr3.4:69887764-69887783 | None:intergenic | 15.0% |
| !! | AAAGAAATTGCTAATAACTA+TGG | + | chr3.4:69888761-69888780 | None:intergenic | 20.0% |
| !! | AACAAAATAAAAATGAACCA+TGG | + | chr3.4:69890324-69890343 | None:intergenic | 20.0% |
| !! | AACATCAATTATAACCAAAA+CGG | + | chr3.4:69889989-69890008 | None:intergenic | 20.0% |
| !! | AAGAAATTGCTAATAACTAT+GGG | + | chr3.4:69888760-69888779 | None:intergenic | 20.0% |
| !! | AATATTTGTAAATTTAGTGG+CGG | - | chr3.4:69889769-69889788 | MS.gene031999:intron | 20.0% |
| !! | AATTATTTCACACATTCAAT+TGG | + | chr3.4:69889294-69889313 | None:intergenic | 20.0% |
| !! | ATATTAAGGAATCAATGTAA+GGG | + | chr3.4:69888507-69888526 | None:intergenic | 20.0% |
| !! | CAAAATATACAAAGAAATGT+AGG | + | chr3.4:69888356-69888375 | None:intergenic | 20.0% |
| !! | CAAGACTAAAAAAACAAATA+AGG | + | chr3.4:69888845-69888864 | None:intergenic | 20.0% |
| !!! | AGAGATTGTTTTATGAAAAA+AGG | + | chr3.4:69890545-69890564 | None:intergenic | 20.0% |
| !!! | AGCTTTTATATATATTGCTT+TGG | - | chr3.4:69888316-69888335 | MS.gene031999:CDS | 20.0% |
| !!! | ATAATTTTATCATGGGTATA+AGG | + | chr3.4:69890086-69890105 | None:intergenic | 20.0% |
| !!! | CTACATTTCTTTGTATATTT+TGG | - | chr3.4:69888354-69888373 | MS.gene031999:intron | 20.0% |
| !!! | TAATTTTATCATGGGTATAA+GGG | + | chr3.4:69890085-69890104 | None:intergenic | 20.0% |
| !!! | TTATTTATCTTTGCTGATTT+TGG | - | chr3.4:69891265-69891284 | MS.gene031999:CDS | 20.0% |
| ! | AATACTCAAACTAAAACCAT+AGG | - | chr3.4:69888187-69888206 | MS.gene031999:intron | 25.0% |
| ! | AATTACAGCAAGAAATTAGA+TGG | + | chr3.4:69890976-69890995 | None:intergenic | 25.0% |
| ! | ACATCAATTATAACCAAAAC+GGG | + | chr3.4:69889988-69890007 | None:intergenic | 25.0% |
| ! | ACCATTTATTCTCTTAAACA+TGG | + | chr3.4:69889507-69889526 | None:intergenic | 25.0% |
| ! | ACTAACGATTTATTTCAAGA+AGG | - | chr3.4:69887974-69887993 | MS.gene031999:intron | 25.0% |
| ! | AGTTATTAGCAATTTCTTTG+AGG | - | chr3.4:69888762-69888781 | MS.gene031999:CDS | 25.0% |
| ! | ATGTACTTTCGTACTTATTA+AGG | + | chr3.4:69888624-69888643 | None:intergenic | 25.0% |
| ! | ATTACAGCAAGAAATTAGAT+GGG | + | chr3.4:69890975-69890994 | None:intergenic | 25.0% |
| ! | ATTCCACTAAGAATAAACAT+TGG | + | chr3.4:69888982-69889001 | None:intergenic | 25.0% |
| ! | ATTGTATATCTCTGACTAAT+TGG | - | chr3.4:69889394-69889413 | MS.gene031999:intron | 25.0% |
| ! | CATATTAAATACTAATCCCT+AGG | - | chr3.4:69890801-69890820 | MS.gene031999:intron | 25.0% |
| ! | CTAATGCAGATACTATAAAA+GGG | - | chr3.4:69888122-69888141 | MS.gene031999:intron | 25.0% |
| ! | GATATTAAGGAATCAATGTA+AGG | + | chr3.4:69888508-69888527 | None:intergenic | 25.0% |
| ! | TAATGCAGATACTATAAAAG+GGG | - | chr3.4:69888123-69888142 | MS.gene031999:intron | 25.0% |
| ! | TATAATTGATGTTGAACCTA+AGG | - | chr3.4:69889996-69890015 | MS.gene031999:intron | 25.0% |
| ! | TCCATGTTTAAGAGAATAAA+TGG | - | chr3.4:69889503-69889522 | MS.gene031999:intron | 25.0% |
| ! | TGAAATAAATCGTTAGTACT+AGG | + | chr3.4:69887971-69887990 | None:intergenic | 25.0% |
| ! | TGTTTAGATCAGATATTCAA+TGG | + | chr3.4:69889569-69889588 | None:intergenic | 25.0% |
| ! | TTTAAGGAGAAAAAAAACCT+CGG | + | chr3.4:69890487-69890506 | None:intergenic | 25.0% |
| !! | AGATTCAGTATCATGAATTT+TGG | - | chr3.4:69891234-69891253 | MS.gene031999:intron | 25.0% |
| !! | AGATTTGACCAATTTTACAT+TGG | + | chr3.4:69888909-69888928 | None:intergenic | 25.0% |
| !! | ATTGATTCCTTAATATCATG+AGG | - | chr3.4:69888511-69888530 | MS.gene031999:CDS | 25.0% |
| !! | TAATGCATTCTTCTCTATTT+TGG | - | chr3.4:69888707-69888726 | MS.gene031999:intron | 25.0% |
| !!! | AATCAATGTAAGGGTATTTT+TGG | + | chr3.4:69888498-69888517 | None:intergenic | 25.0% |
| !!! | ATTTCTTGCTGTAATTTGTT+AGG | - | chr3.4:69890980-69890999 | MS.gene031999:intron | 25.0% |
| AAAAACGACTCTTCTGTATA+TGG | - | chr3.4:69890139-69890158 | MS.gene031999:intron | 30.0% | |
| AACAATCTAGAAGAGACATT+CGG | + | chr3.4:69891103-69891122 | None:intergenic | 30.0% | |
| AATGCAGATACTATAAAAGG+GGG | - | chr3.4:69888124-69888143 | MS.gene031999:intron | 30.0% | |
| AATTTGGATAGAGATTGATC+CGG | + | chr3.4:69889929-69889948 | None:intergenic | 30.0% | |
| ACAAACAATGTTTACAGCAA+AGG | - | chr3.4:69889586-69889605 | MS.gene031999:intron | 30.0% | |
| ACGATTTATTTCAAGAAGGT+AGG | - | chr3.4:69887978-69887997 | MS.gene031999:intron | 30.0% | |
| AGAGAATAAATGGTATGAGT+TGG | - | chr3.4:69889513-69889532 | MS.gene031999:intron | 30.0% | |
| AGGAGATAACCATTATAATC+AGG | - | chr3.4:69888531-69888550 | MS.gene031999:CDS | 30.0% | |
| AGTGAGTATATGGTATGATA+TGG | - | chr3.4:69888668-69888687 | MS.gene031999:intron | 30.0% | |
| ATAAATCGTTAGTACTAGGT+CGG | + | chr3.4:69887967-69887986 | None:intergenic | 30.0% | |
| ATACAAAGAAATGTAGGTCT+TGG | + | chr3.4:69888350-69888369 | None:intergenic | 30.0% | |
| ATGAATTGAACCTAACTTCA+TGG | - | chr3.4:69887800-69887819 | MS.gene031999:intron | 30.0% | |
| ATGCAAGACTTAAAGAGATA+AGG | - | chr3.4:69890692-69890711 | MS.gene031999:intron | 30.0% | |
| ATTATAACCAAAACGGGATT+TGG | + | chr3.4:69889982-69890001 | None:intergenic | 30.0% | |
| ATTGAAACATTACTTCACAC+AGG | + | chr3.4:69889709-69889728 | None:intergenic | 30.0% | |
| CATCCAATGTTTATTCTTAG+TGG | - | chr3.4:69888976-69888995 | MS.gene031999:intron | 30.0% | |
| CCTAATGCAGATACTATAAA+AGG | - | chr3.4:69888121-69888140 | MS.gene031999:intron | 30.0% | |
| GAGATAACCATTATAATCAG+GGG | - | chr3.4:69888533-69888552 | MS.gene031999:CDS | 30.0% | |
| GAGATATTAAAGCCTAAATG+GGG | + | chr3.4:69889744-69889763 | None:intergenic | 30.0% | |
| GGAGATAACCATTATAATCA+GGG | - | chr3.4:69888532-69888551 | MS.gene031999:CDS | 30.0% | |
| GGAGATATTAAAGCCTAAAT+GGG | + | chr3.4:69889745-69889764 | None:intergenic | 30.0% | |
| GTGAAAATGTTGTCATGATT+TGG | - | chr3.4:69889816-69889835 | MS.gene031999:intron | 30.0% | |
| GTTATCTCCTCATGATATTA+AGG | + | chr3.4:69888521-69888540 | None:intergenic | 30.0% | |
| TATAGGATCTCATGGTTTAA+GGG | + | chr3.4:69890751-69890770 | None:intergenic | 30.0% | |
| TATCCAAATTGATCATGCTT+TGG | - | chr3.4:69889939-69889958 | MS.gene031999:intron | 30.0% | |
| TCAACAACCAACATAAAACT+TGG | - | chr3.4:69889047-69889066 | MS.gene031999:intron | 30.0% | |
| TCTTTAACTGTTCAGTATGA+TGG | - | chr3.4:69888928-69888947 | MS.gene031999:intron | 30.0% | |
| TGTTCTATGTGATGACTAAA+GGG | - | chr3.4:69888863-69888882 | MS.gene031999:intron | 30.0% | |
| TTACAGCAAGAAATTAGATG+GGG | + | chr3.4:69890974-69890993 | None:intergenic | 30.0% | |
| TTCCATCAATAACAAGATCA+AGG | + | chr3.4:69890723-69890742 | None:intergenic | 30.0% | |
| TTGTTCTATGTGATGACTAA+AGG | - | chr3.4:69888862-69888881 | MS.gene031999:intron | 30.0% | |
| TTTATTTCAAGAAGGTAGGA+CGG | - | chr3.4:69887982-69888001 | MS.gene031999:intron | 30.0% | |
| ! | ATCATGACAACATTTTCACA+AGG | + | chr3.4:69889815-69889834 | None:intergenic | 30.0% |
| ! | CATTTTATGAGACAACTTGT+GGG | + | chr3.4:69888384-69888403 | None:intergenic | 30.0% |
| ! | CCTTTTATAGTATCTGCATT+AGG | + | chr3.4:69888124-69888143 | None:intergenic | 30.0% |
| ! | TCATGACAACATTTTCACAA+GGG | + | chr3.4:69889814-69889833 | None:intergenic | 30.0% |
| !! | AAATGTTGTCATGATTTGGT+TGG | - | chr3.4:69889820-69889839 | MS.gene031999:intron | 30.0% |
| !! | AACATTTTCACAAGGGTATA+AGG | + | chr3.4:69889807-69889826 | None:intergenic | 30.0% |
| !! | ACATTTTCACAAGGGTATAA+GGG | + | chr3.4:69889806-69889825 | None:intergenic | 30.0% |
| !! | ACTTAGCCTTGCTAAAATTA+GGG | + | chr3.4:69887630-69887649 | None:intergenic | 30.0% |
| !! | GATTGAACCAAGTTTTATGT+TGG | + | chr3.4:69889057-69889076 | None:intergenic | 30.0% |
| !! | TACCTTGATCTTGTTATTGA+TGG | - | chr3.4:69890718-69890737 | MS.gene031999:intron | 30.0% |
| !! | TACTTAGCCTTGCTAAAATT+AGG | + | chr3.4:69887631-69887650 | None:intergenic | 30.0% |
| !! | TTTGAGTATTGAGTGTGTAA+TGG | + | chr3.4:69888177-69888196 | None:intergenic | 30.0% |
| !!! | CTGATTTTGGCTCTATATTT+AGG | - | chr3.4:69891278-69891297 | MS.gene031999:CDS | 30.0% |
| AAAAAAAACCTCGGTTGCAA+GGG | + | chr3.4:69890478-69890497 | None:intergenic | 35.0% | |
| AAAATGACCTCGACATTCAT+GGG | - | chr3.4:69889651-69889670 | MS.gene031999:intron | 35.0% | |
| AACCATGAGACATAAATGGA+TGG | - | chr3.4:69890885-69890904 | MS.gene031999:intron | 35.0% | |
| AACTAATAGAAGCCCAAATG+TGG | + | chr3.4:69889170-69889189 | None:intergenic | 35.0% | |
| AATTCTTCTTATCCTTGTGC+AGG | - | chr3.4:69890408-69890427 | MS.gene031999:intron | 35.0% | |
| ACATTGCTTCGTGATAATTG+TGG | + | chr3.4:69889481-69889500 | None:intergenic | 35.0% | |
| ACGAAGGATAGAATATTCCT+TGG | - | chr3.4:69888045-69888064 | MS.gene031999:CDS | 35.0% | |
| AGACAATAATGCAAGTGAAG+AGG | + | chr3.4:69889888-69889907 | None:intergenic | 35.0% | |
| AGATCAGAGACATTGAGATT+TGG | + | chr3.4:69891023-69891042 | None:intergenic | 35.0% | |
| AGGAATATTCTATCCTTCGT+TGG | + | chr3.4:69888045-69888064 | None:intergenic | 35.0% | |
| AGTCCAAAGCATGATCAATT+TGG | + | chr3.4:69889945-69889964 | None:intergenic | 35.0% | |
| ATGTTCAGCAAGCAACTATA+TGG | + | chr3.4:69890374-69890393 | None:intergenic | 35.0% | |
| ATTTGGATAGAGATTGATCC+GGG | + | chr3.4:69889928-69889947 | None:intergenic | 35.0% | |
| CAAACCAGCCTTAAATATCA+GGG | - | chr3.4:69888210-69888229 | MS.gene031999:intron | 35.0% | |
| CAATGTCTCTGATCTTATCA+AGG | - | chr3.4:69891028-69891047 | MS.gene031999:intron | 35.0% | |
| CCACAACTTGATTAACAACA+AGG | - | chr3.4:69891209-69891228 | MS.gene031999:intron | 35.0% | |
| CCACAAGTTGTCTCATAAAA+TGG | - | chr3.4:69888382-69888401 | MS.gene031999:intron | 35.0% | |
| CGAAGGATAGAATATTCCTT+GGG | - | chr3.4:69888046-69888065 | MS.gene031999:CDS | 35.0% | |
| GAAAACGAATGATATGATGC+TGG | - | chr3.4:69891146-69891165 | MS.gene031999:intron | 35.0% | |
| GATGGTTGAAATGTTTCGTT+AGG | - | chr3.4:69889021-69889040 | MS.gene031999:intron | 35.0% | |
| GCTCAACAAAGAACATGAAA+GGG | - | chr3.4:69891375-69891394 | MS.gene031999:CDS | 35.0% | |
| GGGAGATATTAAAGCCTAAA+TGG | + | chr3.4:69889746-69889765 | None:intergenic | 35.0% | |
| GTAGCTATTGGAAACATCAA+CGG | + | chr3.4:69887513-69887532 | None:intergenic | 35.0% | |
| GTATAGGATCTCATGGTTTA+AGG | + | chr3.4:69890752-69890771 | None:intergenic | 35.0% | |
| GTTGGCAACCAATGTAAAAT+TGG | - | chr3.4:69888898-69888917 | MS.gene031999:intron | 35.0% | |
| TAAATAACCCATGAATGTCG+AGG | + | chr3.4:69889661-69889680 | None:intergenic | 35.0% | |
| TACAGCAAGAAATTAGATGG+GGG | + | chr3.4:69890973-69890992 | None:intergenic | 35.0% | |
| TCCTTGTCATCTTCTTCAAA+AGG | + | chr3.4:69889437-69889456 | None:intergenic | 35.0% | |
| TCTTTACCTTTACCCCATTT+AGG | - | chr3.4:69889729-69889748 | MS.gene031999:intron | 35.0% | |
| TGCTCAACAAAGAACATGAA+AGG | - | chr3.4:69891374-69891393 | MS.gene031999:CDS | 35.0% | |
| TGTCAACCATGAGACATAAA+TGG | - | chr3.4:69890881-69890900 | MS.gene031999:intron | 35.0% | |
| TTAAAGCCTAAATGGGGTAA+AGG | + | chr3.4:69889738-69889757 | None:intergenic | 35.0% | |
| TTCCATCCATTTATGTCTCA+TGG | + | chr3.4:69890890-69890909 | None:intergenic | 35.0% | |
| ! | AAAAGCATACTATGCTGTTG+AGG | - | chr3.4:69890035-69890054 | MS.gene031999:intron | 35.0% |
| ! | AACCATTTTGTGACAACTTG+TGG | + | chr3.4:69888413-69888432 | None:intergenic | 35.0% |
| ! | ACAGCATAGTATGCTTTTGT+TGG | + | chr3.4:69890033-69890052 | None:intergenic | 35.0% |
| ! | ACCATTTTGTGACAACTTGT+GGG | + | chr3.4:69888412-69888431 | None:intergenic | 35.0% |
| ! | AGAACTTCTGCAATTTTCCA+TGG | - | chr3.4:69890304-69890323 | MS.gene031999:intron | 35.0% |
| ! | CCATTTTATGAGACAACTTG+TGG | + | chr3.4:69888385-69888404 | None:intergenic | 35.0% |
| ! | TACGCTGTAGCTTTTTACAT+AGG | - | chr3.4:69890636-69890655 | MS.gene031999:intron | 35.0% |
| ! | TAGCTTTTTACATAGGTGAG+CGG | - | chr3.4:69890643-69890662 | MS.gene031999:intron | 35.0% |
| ! | TGTGTTCTAAACCAGAACAT+TGG | - | chr3.4:69888247-69888266 | MS.gene031999:intron | 35.0% |
| ! | TTGAAGGGTTTTCTTAGCTT+TGG | - | chr3.4:69889100-69889119 | MS.gene031999:intron | 35.0% |
| ! | TTGAGTCTAGAGTGAGTATA+TGG | - | chr3.4:69888658-69888677 | MS.gene031999:intron | 35.0% |
| !! | CCTTGTTGTTAATCAAGTTG+TGG | + | chr3.4:69891212-69891231 | None:intergenic | 35.0% |
| !! | TGTATGACAGTTTTGTGTGA+TGG | - | chr3.4:69889003-69889022 | MS.gene031999:intron | 35.0% |
| !! | TTGCTTGGTTCTACTTTCAA+AGG | - | chr3.4:69887485-69887504 | MS.gene031999:intron | 35.0% |
| !! | TTTGTGCCCTAATTTTAGCA+AGG | - | chr3.4:69887621-69887640 | MS.gene031999:CDS | 35.0% |
| AACAAACCTGCAGATGGTAT+AGG | + | chr3.4:69890768-69890787 | None:intergenic | 40.0% | |
| ACAGATGTAGGGACTGAATT+AGG | - | chr3.4:69887902-69887921 | MS.gene031999:intron | 40.0% | |
| ACAGCAAGAAATTAGATGGG+GGG | + | chr3.4:69890972-69890991 | None:intergenic | 40.0% | |
| ACCCACACTTCATATGGATT+TGG | - | chr3.4:69888069-69888088 | MS.gene031999:CDS | 40.0% | |
| ACGACTCTTCTGTATATGGA+CGG | - | chr3.4:69890143-69890162 | MS.gene031999:intron | 40.0% | |
| AGTTCTGTGTGATGGTTGAA+GGG | - | chr3.4:69889085-69889104 | MS.gene031999:intron | 40.0% | |
| ATCCTTCGTTGGCAATGATT+AGG | + | chr3.4:69888034-69888053 | None:intergenic | 40.0% | |
| ATGAGAAACAAACCTGCAGA+TGG | + | chr3.4:69890774-69890793 | None:intergenic | 40.0% | |
| ATGGTTGACAATTAGAGGTG+GGG | + | chr3.4:69890871-69890890 | None:intergenic | 40.0% | |
| CAACTCAGTAAACAGATCAG+TGG | + | chr3.4:69889266-69889285 | None:intergenic | 40.0% | |
| CACTGATCTGTTTACTGAGT+TGG | - | chr3.4:69889264-69889283 | MS.gene031999:intron | 40.0% | |
| CACTTCTAATGAGAGACGAT+AGG | + | chr3.4:69891179-69891198 | None:intergenic | 40.0% | |
| CATGGTTGACAATTAGAGGT+GGG | + | chr3.4:69890872-69890891 | None:intergenic | 40.0% | |
| CCACACTTCATATGGATTTG+GGG | - | chr3.4:69888071-69888090 | MS.gene031999:CDS | 40.0% | |
| CCCAAATCCATATGAAGTGT+GGG | + | chr3.4:69888073-69888092 | None:intergenic | 40.0% | |
| CCCACACTTCATATGGATTT+GGG | - | chr3.4:69888070-69888089 | MS.gene031999:CDS | 40.0% | |
| CTGTTCAGTATGATGGTTGA+AGG | - | chr3.4:69888935-69888954 | MS.gene031999:intron | 40.0% | |
| CTTCAACCATCACACATAAC+TGG | + | chr3.4:69888286-69888305 | None:intergenic | 40.0% | |
| CTTCGAATTGTTCGTGAATG+TGG | - | chr3.4:69890824-69890843 | MS.gene031999:intron | 40.0% | |
| GAAAAAAAACCTCGGTTGCA+AGG | + | chr3.4:69890479-69890498 | None:intergenic | 40.0% | |
| GAAAATGACCTCGACATTCA+TGG | - | chr3.4:69889650-69889669 | MS.gene031999:intron | 40.0% | |
| GAAGACAGCTTACCACATTT+GGG | - | chr3.4:69889155-69889174 | MS.gene031999:CDS | 40.0% | |
| GATGACTAAAGGGTTGTGTT+AGG | - | chr3.4:69888873-69888892 | MS.gene031999:intron | 40.0% | |
| GATGGGGGGAAAAACAATAA+TGG | + | chr3.4:69890958-69890977 | None:intergenic | 40.0% | |
| GATGGTTGAAGGATTGTGTT+AGG | - | chr3.4:69888946-69888965 | MS.gene031999:intron | 40.0% | |
| GATGTTGAACCTAAGGAGTT+GGG | - | chr3.4:69890003-69890022 | MS.gene031999:intron | 40.0% | |
| GCAAACCAGCCTTAAATATC+AGG | - | chr3.4:69888209-69888228 | MS.gene031999:intron | 40.0% | |
| GGGATCAGCATTATTTACGT+TGG | + | chr3.4:69890851-69890870 | None:intergenic | 40.0% | |
| GTCTCATGGTTGACAATTAG+AGG | + | chr3.4:69890876-69890895 | None:intergenic | 40.0% | |
| TACACAGAGTAGCAAACATG+TGG | + | chr3.4:69888734-69888753 | None:intergenic | 40.0% | |
| TCATGGTTGACAATTAGAGG+TGG | + | chr3.4:69890873-69890892 | None:intergenic | 40.0% | |
| TCCCACAAGTTGTCACAAAA+TGG | - | chr3.4:69888408-69888427 | MS.gene031999:intron | 40.0% | |
| TCTATGACAGTTCTGTGTGA+TGG | - | chr3.4:69889077-69889096 | MS.gene031999:intron | 40.0% | |
| TCTTGCATCCAAACCTTTCA+AGG | + | chr3.4:69890680-69890699 | None:intergenic | 40.0% | |
| TGAAGACAGCTTACCACATT+TGG | - | chr3.4:69889154-69889173 | MS.gene031999:CDS | 40.0% | |
| TGATGTTGAACCTAAGGAGT+TGG | - | chr3.4:69890002-69890021 | MS.gene031999:intron | 40.0% | |
| TGCTACTCAGAAAAGCCAAA+AGG | - | chr3.4:69890214-69890233 | MS.gene031999:intron | 40.0% | |
| TGGTCTACCCCTGATTATAA+TGG | + | chr3.4:69888543-69888562 | None:intergenic | 40.0% | |
| TTCATCTGTGCTTTGTATCC+CGG | - | chr3.4:69889907-69889926 | MS.gene031999:intron | 40.0% | |
| TTGAGGAGGTTAAAGAGGTA+GGG | - | chr3.4:69890052-69890071 | MS.gene031999:intron | 40.0% | |
| ! | AGACATTGAGATTTGGTAGC+AGG | + | chr3.4:69891016-69891035 | None:intergenic | 40.0% |
| ! | AGGCATCGTTTAGTATGAGA+TGG | - | chr3.4:69888782-69888801 | MS.gene031999:CDS | 40.0% |
| ! | ATTTGGGGCTGACAAATGAT+TGG | - | chr3.4:69888086-69888105 | MS.gene031999:CDS | 40.0% |
| ! | CTATGTTCCAAATCCCGTTT+TGG | - | chr3.4:69889972-69889991 | MS.gene031999:intron | 40.0% |
| ! | GATCTTATCAAGGCTTTTGC+AGG | - | chr3.4:69891038-69891057 | MS.gene031999:intron | 40.0% |
| ! | TGGTTTAGAACACAGTCCTA+GGG | + | chr3.4:69888241-69888260 | None:intergenic | 40.0% |
| !! | AAACCACAACAAAGCATTGC+AGG | + | chr3.4:69890585-69890604 | None:intergenic | 40.0% |
| !! | AACCACAACAAAGCATTGCA+GGG | + | chr3.4:69890584-69890603 | None:intergenic | 40.0% |
| !! | ATTTAAGGCTGGTTTGCCTA+TGG | + | chr3.4:69888206-69888225 | None:intergenic | 40.0% |
| !! | GCCTTTTGAAGAAGATGACA+AGG | - | chr3.4:69889433-69889452 | MS.gene031999:intron | 40.0% |
| AAAAGGGGGACTTTGCTTCT+GGG | - | chr3.4:69888138-69888157 | MS.gene031999:intron | 45.0% | |
| AAAGGGTTGTGTTAGGCAGT+TGG | - | chr3.4:69888880-69888899 | MS.gene031999:intron | 45.0% | |
| AAATATCAGGGCCAAACCCT+AGG | - | chr3.4:69888222-69888241 | MS.gene031999:intron | 45.0% | |
| AACACGCTTGCGAGTATCTT+TGG | + | chr3.4:69887456-69887475 | None:intergenic | 45.0% | |
| AAGGTAGGACGGACATTACA+TGG | - | chr3.4:69887993-69888012 | MS.gene031999:intron | 45.0% | |
| ACTCTTCTGTATATGGACGG+TGG | - | chr3.4:69890146-69890165 | MS.gene031999:intron | 45.0% | |
| AGCATACTATGCTGTTGAGG+AGG | - | chr3.4:69890038-69890057 | MS.gene031999:intron | 45.0% | |
| ATAGGTGAGCGGAAAACTCA+CGG | - | chr3.4:69890654-69890673 | MS.gene031999:intron | 45.0% | |
| ATGACAAGGACCCTAGCATT+TGG | - | chr3.4:69889447-69889466 | MS.gene031999:intron | 45.0% | |
| CACGAACAATTCGAAGCCTA+GGG | + | chr3.4:69890820-69890839 | None:intergenic | 45.0% | |
| CAGAGATTCGACCAATGTTC+TGG | + | chr3.4:69888261-69888280 | None:intergenic | 45.0% | |
| CAGTTCTGTGTGATGGTTGA+AGG | - | chr3.4:69889084-69889103 | MS.gene031999:intron | 45.0% | |
| CCCCAAATCCATATGAAGTG+TGG | + | chr3.4:69888074-69888093 | None:intergenic | 45.0% | |
| CCTAACTTCATGGCTCAAAG+CGG | - | chr3.4:69887810-69887829 | MS.gene031999:intron | 45.0% | |
| CTCTTCTGTATATGGACGGT+GGG | - | chr3.4:69890147-69890166 | MS.gene031999:intron | 45.0% | |
| GATGTTTCCAATAGCTACGC+TGG | - | chr3.4:69887515-69887534 | MS.gene031999:intron | 45.0% | |
| GCAGATGGTATAGGATCTCA+TGG | + | chr3.4:69890759-69890778 | None:intergenic | 45.0% | |
| GCTCATGAGGTTGAGGAAAT+AGG | - | chr3.4:69890266-69890285 | MS.gene031999:intron | 45.0% | |
| GGCAATGATTAGGCATAGCA+CGG | + | chr3.4:69888024-69888043 | None:intergenic | 45.0% | |
| GGCTGACAAATGATTGGAAG+AGG | - | chr3.4:69888092-69888111 | MS.gene031999:CDS | 45.0% | |
| GGGTTCCTATGCCCTTTATT+GGG | + | chr3.4:69887843-69887862 | None:intergenic | 45.0% | |
| GGGTTTGGCCCTGATATTTA+AGG | + | chr3.4:69888221-69888240 | None:intergenic | 45.0% | |
| GGTCGAGAAACCAAATGCTA+GGG | + | chr3.4:69889460-69889479 | None:intergenic | 45.0% | |
| GTTGAGGAGGTTAAAGAGGT+AGG | - | chr3.4:69890051-69890070 | MS.gene031999:intron | 45.0% | |
| GTTGGAATTCCCAACTCCTT+AGG | + | chr3.4:69890015-69890034 | None:intergenic | 45.0% | |
| TAAAAGGGGGACTTTGCTTC+TGG | - | chr3.4:69888137-69888156 | MS.gene031999:intron | 45.0% | |
| TAAACTGACAAGGTGGAACG+TGG | - | chr3.4:69887878-69887897 | MS.gene031999:intron | 45.0% | |
| TAGAACACAGTCCTAGGGTT+TGG | + | chr3.4:69888236-69888255 | None:intergenic | 45.0% | |
| TCACGAACAATTCGAAGCCT+AGG | + | chr3.4:69890821-69890840 | None:intergenic | 45.0% | |
| TCCACCTTGTCAGTTTAGCT+CGG | + | chr3.4:69887875-69887894 | None:intergenic | 45.0% | |
| TCTGTGCCAGTTATGTGTGA+TGG | - | chr3.4:69888277-69888296 | MS.gene031999:intron | 45.0% | |
| TGAGATCCTATACCATCTGC+AGG | - | chr3.4:69890759-69890778 | MS.gene031999:intron | 45.0% | |
| TGCCTAATCATTGCCAACGA+AGG | - | chr3.4:69888029-69888048 | MS.gene031999:CDS | 45.0% | |
| TGCTGTTGAGGAGGTTAAAG+AGG | - | chr3.4:69890047-69890066 | MS.gene031999:intron | 45.0% | |
| TGGAACGTGGAACAGATGTA+GGG | - | chr3.4:69887891-69887910 | MS.gene031999:intron | 45.0% | |
| TGGTCGAGAAACCAAATGCT+AGG | + | chr3.4:69889461-69889480 | None:intergenic | 45.0% | |
| TTCTTATCCTTGTGCAGGAG+TGG | - | chr3.4:69890413-69890432 | MS.gene031999:intron | 45.0% | |
| ! | AGCATGATGCGACTTGTTTG+TGG | - | chr3.4:69888810-69888829 | MS.gene031999:intron | 45.0% |
| ! | CTGGTTTAGAACACAGTCCT+AGG | + | chr3.4:69888242-69888261 | None:intergenic | 45.0% |
| ! | GATTGCCCAATAAAGGGCAT+AGG | - | chr3.4:69887835-69887854 | MS.gene031999:intron | 45.0% |
| ! | GCACATGCACAAAGACCTTT+TGG | + | chr3.4:69890232-69890251 | None:intergenic | 45.0% |
| ! | GTTTACAGCAAAGGAGCATG+TGG | - | chr3.4:69889595-69889614 | MS.gene031999:intron | 45.0% |
| ! | TTCCAATAGCTACGCTGGTT+CGG | - | chr3.4:69887520-69887539 | MS.gene031999:intron | 45.0% |
| ! | TTCCCTGCAATGCTTTGTTG+TGG | - | chr3.4:69890579-69890598 | MS.gene031999:intron | 45.0% |
| ! | TTGGCCCTGATATTTAAGGC+TGG | + | chr3.4:69888217-69888236 | None:intergenic | 45.0% |
| !! | AGGTCATTTTCACGCAGCTT+TGG | + | chr3.4:69889641-69889660 | None:intergenic | 45.0% |
| !! | TTCATTATTATATTATATTT+AGG | - | chr3.4:69891302-69891321 | MS.gene031999:CDS | 5.0% |
| AAAGGGGGACTTTGCTTCTG+GGG | - | chr3.4:69888139-69888158 | MS.gene031999:intron | 50.0% | |
| AACTTCATGGCTCAAAGCGG+AGG | - | chr3.4:69887813-69887832 | MS.gene031999:intron | 50.0% | |
| AAGTGTTCCACTCCTGCACA+AGG | + | chr3.4:69890423-69890442 | None:intergenic | 50.0% | |
| ACACTTGCTCAGGGATGTGA+AGG | - | chr3.4:69890437-69890456 | MS.gene031999:intron | 50.0% | |
| ACCGAGCTAAACTGACAAGG+TGG | - | chr3.4:69887871-69887890 | MS.gene031999:intron | 50.0% | |
| ACGACCGAGCTAAACTGACA+AGG | - | chr3.4:69887868-69887887 | MS.gene031999:intron | 50.0% | |
| ACGATGCTGAGCAACACTAG+AGG | + | chr3.4:69887413-69887432 | None:intergenic | 50.0% | |
| ACTCACGGCCTTGAAAGGTT+TGG | - | chr3.4:69890669-69890688 | MS.gene031999:intron | 50.0% | |
| AGCGGAGGATTGCCCAATAA+AGG | - | chr3.4:69887828-69887847 | MS.gene031999:intron | 50.0% | |
| AGGAGTGGAACACTTGCTCA+GGG | - | chr3.4:69890428-69890447 | MS.gene031999:intron | 50.0% | |
| ATCACGTTCGATCGAGAAGG+TGG | - | chr3.4:69887379-69887398 | MS.gene031999:CDS | 50.0% | |
| ATCAGAGATCGCTGCTCATG+AGG | - | chr3.4:69890253-69890272 | MS.gene031999:intron | 50.0% | |
| ATCCGAACCAGCGTAGCTAT+TGG | + | chr3.4:69887525-69887544 | None:intergenic | 50.0% | |
| CAAACACCAGCCCTTGTTAC+TGG | - | chr3.4:69887937-69887956 | MS.gene031999:intron | 50.0% | |
| CATATGAAGTGTGGGTCCCA+AGG | + | chr3.4:69888065-69888084 | None:intergenic | 50.0% | |
| CTCATCACGTTCGATCGAGA+AGG | - | chr3.4:69887376-69887395 | MS.gene031999:CDS | 50.0% | |
| CTTGGGACCCACACTTCATA+TGG | - | chr3.4:69888063-69888082 | MS.gene031999:CDS | 50.0% | |
| GATACTCGCAAGCGTGTTGT+CGG | - | chr3.4:69887458-69887477 | MS.gene031999:intron | 50.0% | |
| GCGGAGGATTGCCCAATAAA+GGG | - | chr3.4:69887829-69887848 | MS.gene031999:intron | 50.0% | |
| GGAAAACTCACGGCCTTGAA+AGG | - | chr3.4:69890664-69890683 | MS.gene031999:intron | 50.0% | |
| GGGGTTCCTATGCCCTTTAT+TGG | + | chr3.4:69887844-69887863 | None:intergenic | 50.0% | |
| GTGGAACGTGGAACAGATGT+AGG | - | chr3.4:69887890-69887909 | MS.gene031999:intron | 50.0% | |
| TATGCAGCTGCACTTGGTAC+TGG | + | chr3.4:69891421-69891440 | None:intergenic | 50.0% | |
| ! | ACAGCAAAGGAGCATGTGGT+GGG | - | chr3.4:69889599-69889618 | MS.gene031999:intron | 50.0% |
| ! | ATAAAGGGCATAGGAACCCC+TGG | - | chr3.4:69887844-69887863 | MS.gene031999:intron | 50.0% |
| ! | CAGTAACAAGGGCTGGTGTT+TGG | + | chr3.4:69887939-69887958 | None:intergenic | 50.0% |
| ! | CCGCTTTGAGCCATGAAGTT+AGG | + | chr3.4:69887813-69887832 | None:intergenic | 50.0% |
| ! | TAAAGGGCATAGGAACCCCT+GGG | - | chr3.4:69887845-69887864 | MS.gene031999:intron | 50.0% |
| ! | TACAGCAAAGGAGCATGTGG+TGG | - | chr3.4:69889598-69889617 | MS.gene031999:intron | 50.0% |
| !! | CGTGTTGTCGGTGTTTTGCT+TGG | - | chr3.4:69887470-69887489 | MS.gene031999:intron | 50.0% |
| !! | GGACTTTGCTTCTGGGGTAA+GGG | - | chr3.4:69888145-69888164 | MS.gene031999:intron | 50.0% |
| ACGTTCGATCGAGAAGGTGG+TGG | - | chr3.4:69887382-69887401 | MS.gene031999:CDS | 55.0% | |
| CACCAGCCCTTGTTACTGGA+CGG | - | chr3.4:69887941-69887960 | MS.gene031999:intron | 55.0% | |
| CAGGAGTGGAACACTTGCTC+AGG | - | chr3.4:69890427-69890446 | MS.gene031999:intron | 55.0% | |
| CATTAGCACCCTTGCAACCG+AGG | - | chr3.4:69890467-69890486 | MS.gene031999:intron | 55.0% | |
| GATCGCTGCTCATGAGGTTG+AGG | - | chr3.4:69890259-69890278 | MS.gene031999:intron | 55.0% | |
| ! | AGTTTAGCTCGGTCGTCCCA+GGG | + | chr3.4:69887864-69887883 | None:intergenic | 55.0% |
| ! | CAGCAAAGGAGCATGTGGTG+GGG | - | chr3.4:69889600-69889619 | MS.gene031999:intron | 55.0% |
| !! | CTCGGTTGCAAGGGTGCTAA+TGG | + | chr3.4:69890469-69890488 | None:intergenic | 55.0% |
| !! | GGGACTTTGCTTCTGGGGTA+AGG | - | chr3.4:69888144-69888163 | MS.gene031999:intron | 55.0% |
| AGGTCGGCCGTCCAGTAACA+AGG | + | chr3.4:69887951-69887970 | None:intergenic | 60.0% | |
| GGTCGGCCGTCCAGTAACAA+GGG | + | chr3.4:69887950-69887969 | None:intergenic | 60.0% | |
| ! | CAAAGGAGCATGTGGTGGGG+TGG | - | chr3.4:69889603-69889622 | MS.gene031999:intron | 60.0% |
| ! | CAGTTTAGCTCGGTCGTCCC+AGG | + | chr3.4:69887865-69887884 | None:intergenic | 60.0% |
| ! | GTGGTGGGGTGGTATAGCAC+TGG | - | chr3.4:69889614-69889633 | MS.gene031999:intron | 60.0% |
| ! | GTTTAGCTCGGTCGTCCCAG+GGG | + | chr3.4:69887863-69887882 | None:intergenic | 60.0% |
| !! | GCTGCACTTGGTACTGGTGC+TGG | + | chr3.4:69891415-69891434 | None:intergenic | 60.0% |
| GGCCGTCCAGTAACAAGGGC+TGG | + | chr3.4:69887946-69887965 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 69887350 | 69891441 | 69887350 | ID=MS.gene031999 |
| chr3.4 | mRNA | 69887350 | 69891441 | 69887350 | ID=MS.gene031999.t1;Parent=MS.gene031999 |
| chr3.4 | exon | 69891255 | 69891441 | 69891255 | ID=MS.gene031999.t1.exon1;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69891255 | 69891441 | 69891255 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69889267 | 69889359 | 69889267 | ID=MS.gene031999.t1.exon2;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69889267 | 69889359 | 69889267 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69889107 | 69889188 | 69889107 | ID=MS.gene031999.t1.exon3;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69889107 | 69889188 | 69889107 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69888723 | 69888819 | 69888723 | ID=MS.gene031999.t1.exon4;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69888723 | 69888819 | 69888723 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69888504 | 69888579 | 69888504 | ID=MS.gene031999.t1.exon5;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69888504 | 69888579 | 69888504 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69888303 | 69888361 | 69888303 | ID=MS.gene031999.t1.exon6;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69888303 | 69888361 | 69888303 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69888011 | 69888133 | 69888011 | ID=MS.gene031999.t1.exon7;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69888011 | 69888133 | 69888011 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69887732 | 69887789 | 69887732 | ID=MS.gene031999.t1.exon8;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69887732 | 69887789 | 69887732 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69887561 | 69887646 | 69887561 | ID=MS.gene031999.t1.exon9;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69887561 | 69887646 | 69887561 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| chr3.4 | exon | 69887350 | 69887418 | 69887350 | ID=MS.gene031999.t1.exon10;Parent=MS.gene031999.t1 |
| chr3.4 | CDS | 69887350 | 69887418 | 69887350 | ID=cds.MS.gene031999.t1;Parent=MS.gene031999.t1 |
| Gene Sequence |
| Protein sequence |
