Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80661.t1 | XP_003616580.1 | 100 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 1.50E-168 | 602.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80661.t1 | O24412 | 89.9 | 308 | 31 | 0 | 1 | 308 | 1 | 308 | 1.8e-154 | 546.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80661.t1 | B7FLW2 | 100.0 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 1.1e-168 | 602.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80661.t1 | MTR_5g081980 | 100.000 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 0.0 | 629 |
| MS.gene80661.t1 | MTR_3g070180 | 94.822 | 309 | 16 | 0 | 1 | 309 | 1 | 309 | 0.0 | 598 |
| MS.gene80661.t1 | MTR_3g070190 | 32.841 | 271 | 165 | 6 | 19 | 285 | 25 | 282 | 6.31e-35 | 128 |
| MS.gene80661.t1 | MTR_5g082000 | 31.365 | 271 | 169 | 6 | 19 | 285 | 21 | 278 | 2.82e-31 | 119 |
| MS.gene80661.t1 | MTR_3g009270 | 26.014 | 296 | 181 | 6 | 19 | 285 | 13 | 299 | 2.58e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80661.t1 | AT5G05780 | 89.935 | 308 | 31 | 0 | 1 | 308 | 1 | 308 | 0.0 | 571 |
| MS.gene80661.t1 | AT3G11270 | 89.508 | 305 | 32 | 0 | 1 | 305 | 1 | 305 | 0.0 | 563 |
| MS.gene80661.t1 | AT5G05780 | 88.961 | 308 | 31 | 1 | 1 | 308 | 1 | 305 | 0.0 | 560 |
| MS.gene80661.t1 | AT3G11270 | 88.525 | 305 | 32 | 1 | 1 | 305 | 1 | 302 | 0.0 | 551 |
| MS.gene80661.t1 | AT2G39990 | 29.487 | 234 | 148 | 6 | 19 | 248 | 30 | 250 | 3.87e-25 | 102 |
| MS.gene80661.t1 | AT4G26430 | 25.081 | 307 | 191 | 7 | 19 | 295 | 13 | 310 | 7.49e-23 | 96.7 |
| MS.gene80661.t1 | AT5G56280 | 24.262 | 305 | 192 | 7 | 19 | 295 | 13 | 306 | 6.81e-22 | 94.4 |
Find 63 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACAGGATCTCATGGTTTA+AGG | 0.226556 | 5.4:+64681813 | None:intergenic |
| CGCGTCGTTGGAGTTCTTCT+TGG | 0.238114 | 5.4:-64684788 | MS.gene80661:CDS |
| ATTATAACCAAAACGGGATT+TGG | 0.243791 | 5.4:+64683659 | None:intergenic |
| GTAGGAATTCCCAACTCTTT+AGG | 0.247111 | 5.4:+64683626 | None:intergenic |
| TACCTTGACCTTGTCATTGA+TGG | 0.274529 | 5.4:-64681844 | MS.gene80661:CDS |
| GACGCGTTTGCGAGTGTCTT+TGG | 0.305618 | 5.4:+64684805 | None:intergenic |
| CTCTGTTGCAAGGGTGCTAA+TGG | 0.335329 | 5.4:+64682073 | None:intergenic |
| GCTCATGAAGTTGAGGAAAT+AGG | 0.335482 | 5.4:-64683341 | MS.gene80661:intron |
| TGAGATCCTGTATCATTTGC+AGG | 0.345264 | 5.4:-64681803 | MS.gene80661:intron |
| CTATGTTCCAAATCCCGTTT+TGG | 0.360839 | 5.4:-64683666 | MS.gene80661:CDS |
| CAAATCAGTGACATTAAGAT+TGG | 0.377033 | 5.4:+64680526 | None:intergenic |
| ACATCAATTATAACCAAAAC+GGG | 0.396892 | 5.4:+64683653 | None:intergenic |
| ACTCACAGCCTTGAAGGGTT+TGG | 0.398386 | 5.4:-64681893 | MS.gene80661:CDS |
| TCTTGCATCCAAACCCTTCA+AGG | 0.405808 | 5.4:+64681885 | None:intergenic |
| CATGAGCAGCAATTTCTGAT+TGG | 0.415675 | 5.4:+64683357 | None:intergenic |
| ATGACAAGGATCCTAGCATT+TGG | 0.417257 | 5.4:-64684556 | MS.gene80661:CDS |
| CTTCTTGGTTCCTCTTTCAA+AGG | 0.424962 | 5.4:-64684773 | MS.gene80661:CDS |
| AACATCAATTATAACCAAAA+CGG | 0.431934 | 5.4:+64683652 | None:intergenic |
| TAATGTCACTGATTTGATCA+AGG | 0.437836 | 5.4:-64680519 | MS.gene80661:CDS |
| TGACATTAAGATTGGGCAGC+AGG | 0.443727 | 5.4:+64680534 | None:intergenic |
| GATGTTGAACCTAAAGAGTT+GGG | 0.449227 | 5.4:-64683635 | MS.gene80661:CDS |
| TACAGGATCTCATGGTTTAA+GGG | 0.462303 | 5.4:+64681814 | None:intergenic |
| TGCAAAACTCACAGCCTTGA+AGG | 0.463569 | 5.4:-64681899 | MS.gene80661:CDS |
| TGTAGCTAAGGAGCATGTTG+TGG | 0.468792 | 5.4:-64684374 | MS.gene80661:intron |
| TCCTTGTCATCTTCTTCAAA+CGG | 0.478344 | 5.4:+64684569 | None:intergenic |
| TCTCAACTTCCTGCTGTACT+TGG | 0.483401 | 5.4:+64679933 | None:intergenic |
| TGATGTTGAACCTAAAGAGT+TGG | 0.483855 | 5.4:-64683636 | MS.gene80661:CDS |
| GTAGCTAAGGAGCATGTTGT+GGG | 0.499396 | 5.4:-64684373 | MS.gene80661:intron |
| TCTATGTTCAAGAGAATCAA+TGG | 0.505078 | 5.4:-64684500 | MS.gene80661:intron |
| TGCTCAACAAAGAACATGAA+AGG | 0.510479 | 5.4:-64679983 | MS.gene80661:CDS |
| GTTGTGGGGTGGTATAGTAC+TGG | 0.515160 | 5.4:-64684358 | MS.gene80661:CDS |
| CTTCCTGCTGTACTTGGTAC+AGG | 0.516124 | 5.4:+64679939 | None:intergenic |
| AACCAACCTGCAAATGATAC+AGG | 0.522061 | 5.4:+64681797 | None:intergenic |
| TGCTGTTGAGGAGGTTAAAG+AGG | 0.523785 | 5.4:-64683591 | MS.gene80661:intron |
| GACACTCGCAAACGCGTCGT+TGG | 0.526211 | 5.4:-64684800 | MS.gene80661:CDS |
| GAAAACTAATGATCAAATGC+TGG | 0.532471 | 5.4:-64680393 | MS.gene80661:CDS |
| CCTTGTTGTTAATCAAGTTG+TGG | 0.533219 | 5.4:+64680330 | None:intergenic |
| GCTCAACAAAGAACATGAAA+GGG | 0.533816 | 5.4:-64679982 | MS.gene80661:CDS |
| AAATCAGTGACATTAAGATT+GGG | 0.537245 | 5.4:+64680527 | None:intergenic |
| CAAAAGGCACCTCTGTTGCA+AGG | 0.539561 | 5.4:+64682063 | None:intergenic |
| TGATCAAGAAACCAAATGCT+AGG | 0.549445 | 5.4:+64684545 | None:intergenic |
| ACATTTGCTTAGAGATGTGA+AGG | 0.560287 | 5.4:-64682102 | MS.gene80661:CDS |
| ATCGACGGTGCCTTTGAAAG+AGG | 0.562674 | 5.4:+64684763 | None:intergenic |
| GCAAAACTCACAGCCTTGAA+GGG | 0.565234 | 5.4:-64681898 | MS.gene80661:CDS |
| AATTGCTGCTCATGAAGTTG+AGG | 0.565331 | 5.4:-64683348 | MS.gene80661:CDS |
| ACTATGCTGAGTAAAACTAA+AGG | 0.568083 | 5.4:+64684848 | None:intergenic |
| GCAAATGATACAGGATCTCA+TGG | 0.569112 | 5.4:+64681806 | None:intergenic |
| TGCCACTCAGAAGAGTCAAA+AGG | 0.570358 | 5.4:-64683393 | MS.gene80661:CDS |
| AAAAGCTTACTATGCTGTTG+AGG | 0.571528 | 5.4:-64683603 | MS.gene80661:CDS |
| GTGCCTGTACCAAGTACAGC+AGG | 0.578421 | 5.4:-64679942 | MS.gene80661:CDS |
| AGCTTACTATGCTGTTGAGG+AGG | 0.588880 | 5.4:-64683600 | MS.gene80661:CDS |
| CATTAGCACCCTTGCAACAG+AGG | 0.592118 | 5.4:-64682072 | MS.gene80661:intron |
| CCACAACTTGATTAACAACA+AGG | 0.604169 | 5.4:-64680330 | MS.gene80661:intron |
| TTCCATCAATGACAAGGTCA+AGG | 0.607781 | 5.4:+64681842 | None:intergenic |
| GATATCACCAACAGCTACGC+CGG | 0.611908 | 5.4:-64684743 | MS.gene80661:intron |
| AAAAGGCACCTCTGTTGCAA+GGG | 0.618690 | 5.4:+64682064 | None:intergenic |
| GCCGTTTGAAGAAGATGACA+AGG | 0.651393 | 5.4:-64684570 | MS.gene80661:CDS |
| AATTGTACCGGCGTAGCTGT+TGG | 0.654663 | 5.4:+64684736 | None:intergenic |
| GTAGCTGTTGGTGATATCGA+CGG | 0.656872 | 5.4:+64684748 | None:intergenic |
| CTAAGGAGCATGTTGTGGGG+TGG | 0.656967 | 5.4:-64684369 | MS.gene80661:CDS |
| CACTTCTAATGAGAGACGAT+AGG | 0.662773 | 5.4:+64680363 | None:intergenic |
| GAAGCTTTCCATCAATGACA+AGG | 0.673682 | 5.4:+64681836 | None:intergenic |
| TAGCTAAGGAGCATGTTGTG+GGG | 0.682914 | 5.4:-64684372 | MS.gene80661:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATATTATTAATTA+AGG | - | chr5.4:64683438-64683457 | MS.gene80661:intron | 0.0% |
| !! | AAAGAAGAATATAAATTTAT+AGG | + | chr5.4:64682703-64682722 | None:intergenic | 10.0% |
| !!! | ATTTGCATATTTTTTTATAT+TGG | - | chr5.4:64680393-64680412 | MS.gene80661:CDS | 10.0% |
| !!! | TAATTAAGTGTTATTAATAA+CGG | + | chr5.4:64682657-64682676 | None:intergenic | 10.0% |
| !!! | TACTTTTCTTTTTTAAATTA+TGG | - | chr5.4:64683296-64683315 | MS.gene80661:intron | 10.0% |
| !!! | TTTGCATATTTTTTTATATT+GGG | - | chr5.4:64680394-64680413 | MS.gene80661:CDS | 10.0% |
| !! | AAAATAAAATAATACTGAGT+CGG | - | chr5.4:64682161-64682180 | MS.gene80661:intron | 15.0% |
| !!! | TATTTCTCATTTATGATTTT+TGG | - | chr5.4:64682610-64682629 | MS.gene80661:intron | 15.0% |
| !!! | TGATTTGGTTTTATATTTAT+GGG | - | chr5.4:64684586-64684605 | MS.gene80661:intron | 15.0% |
| !! | AAATTTGATGTGATTAAAGA+TGG | - | chr5.4:64680417-64680436 | MS.gene80661:intron | 20.0% |
| !! | AACATCAATTATAACCAAAA+CGG | + | chr5.4:64681194-64681213 | None:intergenic | 20.0% |
| !! | AATTGTATTACTTGAAAACA+AGG | + | chr5.4:64684200-64684219 | None:intergenic | 20.0% |
| !! | ATATTTGCAAGAAAGATAAA+AGG | + | chr5.4:64681292-64681311 | None:intergenic | 20.0% |
| !! | ATCAATAGTTTCATAGATTA+TGG | + | chr5.4:64683073-64683092 | None:intergenic | 20.0% |
| !! | ATTGAAATTGAAAATTGTAC+CGG | + | chr5.4:64680122-64680141 | None:intergenic | 20.0% |
| !! | TCATAAACATAGCTATAAAA+AGG | + | chr5.4:64680650-64680669 | None:intergenic | 20.0% |
| !!! | ATTTGTCTAATTTGATTTCT+GGG | + | chr5.4:64681593-64681612 | None:intergenic | 20.0% |
| !!! | CACATAGTTTAATTTAAAAC+TGG | - | chr5.4:64683154-64683173 | MS.gene80661:intron | 20.0% |
| !!! | CTGATTTGGTTTTATATTTA+TGG | - | chr5.4:64684585-64684604 | MS.gene80661:intron | 20.0% |
| !!! | TATTTGTCTAATTTGATTTC+TGG | + | chr5.4:64681594-64681613 | None:intergenic | 20.0% |
| !!! | TGATTTATTTTTTGTAGCTA+AGG | - | chr5.4:64680457-64680476 | MS.gene80661:intron | 20.0% |
| !!! | TTTTGTTTATTACTGCAATT+AGG | - | chr5.4:64680602-64680621 | MS.gene80661:intron | 20.0% |
| ! | AAATCAGTGACATTAAGATT+GGG | + | chr5.4:64684319-64684338 | None:intergenic | 25.0% |
| ! | AATAGCAGTTTGTCTAAATT+TGG | + | chr5.4:64680838-64680857 | None:intergenic | 25.0% |
| ! | AATCAATCAATAATCCATAG+AGG | + | chr5.4:64684411-64684430 | None:intergenic | 25.0% |
| ! | AATGAGGATAATGATTATGT+TGG | - | chr5.4:64682360-64682379 | MS.gene80661:intron | 25.0% |
| ! | ACAACCAATTATTAATCCTT+AGG | + | chr5.4:64681067-64681086 | None:intergenic | 25.0% |
| ! | ACATCAATTATAACCAAAAC+GGG | + | chr5.4:64681193-64681212 | None:intergenic | 25.0% |
| ! | AGAGAAACAAAATGAATTAG+TGG | + | chr5.4:64681814-64681833 | None:intergenic | 25.0% |
| ! | ATGAGGATAATGATTATGTT+GGG | - | chr5.4:64682361-64682380 | MS.gene80661:intron | 25.0% |
| ! | GAAACTTAATTGTTAGATGT+AGG | - | chr5.4:64681396-64681415 | MS.gene80661:intron | 25.0% |
| ! | GCACTGTTAAAAACAAATAA+AGG | + | chr5.4:64680255-64680274 | None:intergenic | 25.0% |
| ! | GTATAACAAAATTGAGCAAA+AGG | + | chr5.4:64682799-64682818 | None:intergenic | 25.0% |
| ! | TAAAAACGCAACAAATTTCA+TGG | - | chr5.4:64679945-64679964 | MS.gene80661:CDS | 25.0% |
| ! | TATTAAGTGAAGAGAGAATA+TGG | + | chr5.4:64682271-64682290 | None:intergenic | 25.0% |
| ! | TCTCTATGTTATCTTGATTT+GGG | - | chr5.4:64684220-64684239 | MS.gene80661:intron | 25.0% |
| ! | TGGTATGAAAGATTATTGTT+TGG | - | chr5.4:64680363-64680382 | MS.gene80661:CDS | 25.0% |
| ! | TTAAAAAAACAACTATGCAG+TGG | + | chr5.4:64680580-64680599 | None:intergenic | 25.0% |
| ! | TTACTTCTAATTTCTGTTTC+TGG | - | chr5.4:64682469-64682488 | MS.gene80661:intron | 25.0% |
| ! | TTCAATATAATTGCATGTGT+CGG | - | chr5.4:64680150-64680169 | MS.gene80661:intron | 25.0% |
| ! | TTCTCTATGTTATCTTGATT+TGG | - | chr5.4:64684219-64684238 | MS.gene80661:intron | 25.0% |
| ! | TTGCATCATGAACAAAATAA+AGG | + | chr5.4:64681570-64681589 | None:intergenic | 25.0% |
| !! | AAGCTTTTCTTATGTAACAA+AGG | + | chr5.4:64684772-64684791 | None:intergenic | 25.0% |
| !! | ATCAGATTTTTGCTTTCTTT+AGG | - | chr5.4:64683229-64683248 | MS.gene80661:intron | 25.0% |
| !! | TATAGCTTTTGCAAAAAATG+CGG | - | chr5.4:64680764-64680783 | MS.gene80661:intron | 25.0% |
| !! | TCAGATTTTTGCTTTCTTTA+GGG | - | chr5.4:64683230-64683249 | MS.gene80661:intron | 25.0% |
| !!! | ATCCTCATTTTTAAATAGTG+AGG | + | chr5.4:64682349-64682368 | None:intergenic | 25.0% |
| !!! | GATTATTCTTTTTTGACACA+AGG | - | chr5.4:64682885-64682904 | MS.gene80661:intron | 25.0% |
| !!! | TCATTTTGACTGTAAAAGAA+AGG | - | chr5.4:64683637-64683656 | MS.gene80661:CDS | 25.0% |
| AAAAAAACTTAGGGTGTGTT+TGG | + | chr5.4:64683940-64683959 | None:intergenic | 30.0% | |
| AAAAATATGGAGTGTATGAG+AGG | + | chr5.4:64681865-64681884 | None:intergenic | 30.0% | |
| AAAGCTCAAGAAACAAAACA+TGG | + | chr5.4:64684684-64684703 | None:intergenic | 30.0% | |
| AAATCAATTTAGTCCTCCTT+AGG | - | chr5.4:64684652-64684671 | MS.gene80661:intron | 30.0% | |
| AACACACCCAAAAAAAACTT+AGG | + | chr5.4:64683950-64683969 | None:intergenic | 30.0% | |
| AAGAGAAACTGTTATGAAAC+TGG | - | chr5.4:64681623-64681642 | MS.gene80661:intron | 30.0% | |
| AATCAATTTAGTCCTCCTTA+GGG | - | chr5.4:64684653-64684672 | MS.gene80661:intron | 30.0% | |
| AATCATTCTGCTTTATGTGA+TGG | - | chr5.4:64681347-64681366 | MS.gene80661:intron | 30.0% | |
| ACACACCCAAAAAAAACTTA+GGG | + | chr5.4:64683949-64683968 | None:intergenic | 30.0% | |
| ACAGTCAAAATGAAGAAGAA+AGG | + | chr5.4:64683630-64683649 | None:intergenic | 30.0% | |
| ACTATGCTGAGTAAAACTAA+AGG | + | chr5.4:64679998-64680017 | None:intergenic | 30.0% | |
| AGAAATAGCAGATAGTGTAA+TGG | + | chr5.4:64682597-64682616 | None:intergenic | 30.0% | |
| AGCAAAAATCTGATCATTTC+AGG | + | chr5.4:64683223-64683242 | None:intergenic | 30.0% | |
| ATAGCTATGTTTATGACTCT+AGG | - | chr5.4:64680654-64680673 | MS.gene80661:intron | 30.0% | |
| ATTATAACCAAAACGGGATT+TGG | + | chr5.4:64681187-64681206 | None:intergenic | 30.0% | |
| ATTGAAAAAGACACCATTAG+AGG | + | chr5.4:64682855-64682874 | None:intergenic | 30.0% | |
| CAAATCAGTGACATTAAGAT+TGG | + | chr5.4:64684320-64684339 | None:intergenic | 30.0% | |
| CACAAAATCTCATCTATGTT+CGG | + | chr5.4:64683673-64683692 | None:intergenic | 30.0% | |
| CAGTCAAAATGAAGAAGAAA+GGG | + | chr5.4:64683629-64683648 | None:intergenic | 30.0% | |
| CATATATCAACCTAAATTCC+TGG | + | chr5.4:64683118-64683137 | None:intergenic | 30.0% | |
| GAAAACTAATGATCAAATGC+TGG | - | chr5.4:64684450-64684469 | MS.gene80661:intron | 30.0% | |
| GAAAGATTGATTAGAGATCT+AGG | + | chr5.4:64683599-64683618 | None:intergenic | 30.0% | |
| GAAATAGCAGATAGTGTAAT+GGG | + | chr5.4:64682596-64682615 | None:intergenic | 30.0% | |
| GAACATCAATAATCGATAAG+AGG | + | chr5.4:64681133-64681152 | None:intergenic | 30.0% | |
| GACATGGTAAAACACAATAT+TGG | + | chr5.4:64684261-64684280 | None:intergenic | 30.0% | |
| GCAACCTAAGGATTAATAAT+TGG | - | chr5.4:64681060-64681079 | MS.gene80661:intron | 30.0% | |
| TAAAATTCCGCTACACAATA+GGG | + | chr5.4:64680911-64680930 | None:intergenic | 30.0% | |
| TAATGACCACACCAAAAATA+TGG | + | chr5.4:64681878-64681897 | None:intergenic | 30.0% | |
| TAGATGTAGGAACTTAAGAA+TGG | - | chr5.4:64681409-64681428 | MS.gene80661:intron | 30.0% | |
| TAGCAAAATAAAACAGGACA+TGG | + | chr5.4:64684277-64684296 | None:intergenic | 30.0% | |
| TATTGAACAACACTGTCATA+TGG | + | chr5.4:64681962-64681981 | None:intergenic | 30.0% | |
| TCATACTAAATAGTGTGTTG+CGG | + | chr5.4:64680864-64680883 | None:intergenic | 30.0% | |
| TCTATGTTCAAGAGAATCAA+TGG | - | chr5.4:64680343-64680362 | MS.gene80661:CDS | 30.0% | |
| TGAATCAAAGTTTAGTATCC+AGG | - | chr5.4:64684746-64684765 | MS.gene80661:CDS | 30.0% | |
| TGAGGATAATGATTATGTTG+GGG | - | chr5.4:64682362-64682381 | MS.gene80661:intron | 30.0% | |
| TGCCTCACTATTTAAAAATG+AGG | - | chr5.4:64682344-64682363 | MS.gene80661:intron | 30.0% | |
| TGTGGCATAGTAATTTAAAG+AGG | - | chr5.4:64680733-64680752 | MS.gene80661:intron | 30.0% | |
| TTGATGTTCGTCTCAATTTA+TGG | - | chr5.4:64681144-64681163 | MS.gene80661:intron | 30.0% | |
| TTGTTAAATAGCAGGTATAG+CGG | - | chr5.4:64680793-64680812 | MS.gene80661:intron | 30.0% | |
| ! | GAGCTTTAGTTAAGTTGTTT+GGG | - | chr5.4:64684697-64684716 | MS.gene80661:intron | 30.0% |
| ! | GTTAGTCTGTTTGTTAGTTT+CGG | - | chr5.4:64684089-64684108 | MS.gene80661:intron | 30.0% |
| ! | TCTCATACACTCCATATTTT+TGG | - | chr5.4:64681864-64681883 | MS.gene80661:CDS | 30.0% |
| ! | TGAGCTTTAGTTAAGTTGTT+TGG | - | chr5.4:64684696-64684715 | MS.gene80661:intron | 30.0% |
| ! | TGGGTTGAATTGTTTGAAAT+TGG | - | chr5.4:64684716-64684735 | MS.gene80661:intron | 30.0% |
| !! | TAATGTCACTGATTTGATCA+AGG | - | chr5.4:64684324-64684343 | MS.gene80661:CDS | 30.0% |
| !! | TACATTGATTCCTTTCAAGT+TGG | - | chr5.4:64682816-64682835 | MS.gene80661:intron | 30.0% |
| !!! | AACACACCCTAAGTTTTTTT+TGG | - | chr5.4:64683940-64683959 | MS.gene80661:intron | 30.0% |
| !!! | ACACACCCTAAGTTTTTTTT+GGG | - | chr5.4:64683941-64683960 | MS.gene80661:intron | 30.0% |
| !!! | ATGTCCTGTTTTATTTTGCT+AGG | - | chr5.4:64684276-64684295 | MS.gene80661:intron | 30.0% |
| !!! | CTTTTTTGACACAAGGATAA+AGG | - | chr5.4:64682892-64682911 | MS.gene80661:intron | 30.0% |
| !!! | GTTTTTTTTGGGTGTGTTTA+TGG | - | chr5.4:64683952-64683971 | MS.gene80661:intron | 30.0% |
| AAAAGCTTACTATGCTGTTG+AGG | - | chr5.4:64681240-64681259 | MS.gene80661:intron | 35.0% | |
| ACACTCCTTTCCTATATGTA+TGG | - | chr5.4:64681782-64681801 | MS.gene80661:intron | 35.0% | |
| ACATTTGCTTAGAGATGTGA+AGG | - | chr5.4:64682741-64682760 | MS.gene80661:intron | 35.0% | |
| ACGTCCTAGCAAAATAAAAC+AGG | + | chr5.4:64684283-64684302 | None:intergenic | 35.0% | |
| ACTGTGAAAGTGGAAAATAG+CGG | + | chr5.4:64680939-64680958 | None:intergenic | 35.0% | |
| AGCGGTTATTGCTTACATAT+CGG | - | chr5.4:64682096-64682115 | MS.gene80661:CDS | 35.0% | |
| ATACAGGATCTCATGGTTTA+AGG | + | chr5.4:64683033-64683052 | None:intergenic | 35.0% | |
| ATACATATAGGAAAGGAGTG+TGG | + | chr5.4:64681783-64681802 | None:intergenic | 35.0% | |
| CCACAACTTGATTAACAACA+AGG | - | chr5.4:64684513-64684532 | MS.gene80661:CDS | 35.0% | |
| CTAAAATTCCGCTACACAAT+AGG | + | chr5.4:64680912-64680931 | None:intergenic | 35.0% | |
| CTATGAAACTATTGATGCTC+TGG | - | chr5.4:64683077-64683096 | MS.gene80661:intron | 35.0% | |
| CTGCTATGCTATTACATATC+AGG | - | chr5.4:64681994-64682013 | MS.gene80661:intron | 35.0% | |
| GAAATAGGTATGTCATGGAA+TGG | - | chr5.4:64681517-64681536 | MS.gene80661:intron | 35.0% | |
| GACAACAAAACCAACTTGAA+AGG | + | chr5.4:64682829-64682848 | None:intergenic | 35.0% | |
| GATGTTGAACCTAAAGAGTT+GGG | - | chr5.4:64681208-64681227 | MS.gene80661:intron | 35.0% | |
| GCTCAACAAAGAACATGAAA+GGG | - | chr5.4:64684861-64684880 | MS.gene80661:CDS | 35.0% | |
| GTGTTATGCAATTTCCTCTA+TGG | - | chr5.4:64684394-64684413 | MS.gene80661:intron | 35.0% | |
| GTTTATGGTAAAAAGCTCTG+TGG | - | chr5.4:64683967-64683986 | MS.gene80661:intron | 35.0% | |
| GTTTGCTCTGTAGATAGTTT+GGG | + | chr5.4:64681694-64681713 | None:intergenic | 35.0% | |
| TAATGATTATGTTGGGGAAG+AGG | - | chr5.4:64682368-64682387 | MS.gene80661:intron | 35.0% | |
| TAATTATACCGAGTGTAGCT+TGG | - | chr5.4:64680684-64680703 | MS.gene80661:intron | 35.0% | |
| TACAGGATCTCATGGTTTAA+GGG | + | chr5.4:64683032-64683051 | None:intergenic | 35.0% | |
| TCCTTGTCATCTTCTTCAAA+CGG | + | chr5.4:64680277-64680296 | None:intergenic | 35.0% | |
| TCTAAATTTGGCTATGCTAG+AGG | + | chr5.4:64680826-64680845 | None:intergenic | 35.0% | |
| TGAAGAGAGAATATGGAGAT+TGG | + | chr5.4:64682264-64682283 | None:intergenic | 35.0% | |
| TGAGGATTCATTGAAGTTGA+AGG | - | chr5.4:64682318-64682337 | MS.gene80661:intron | 35.0% | |
| TGATCAAGAAACCAAATGCT+AGG | + | chr5.4:64680301-64680320 | None:intergenic | 35.0% | |
| TGATGTTGAACCTAAAGAGT+TGG | - | chr5.4:64681207-64681226 | MS.gene80661:intron | 35.0% | |
| TGCTCAACAAAGAACATGAA+AGG | - | chr5.4:64684860-64684879 | MS.gene80661:CDS | 35.0% | |
| TTAGTGATGAGAGTTTACCT+AGG | + | chr5.4:64682226-64682245 | None:intergenic | 35.0% | |
| TTGAGGAAATAGGTATGTCA+TGG | - | chr5.4:64681512-64681531 | MS.gene80661:intron | 35.0% | |
| TTTCTTATGTAACAAAGGCC+TGG | + | chr5.4:64684767-64684786 | None:intergenic | 35.0% | |
| TTTGGTTGTAGGGTTTAGAA+GGG | - | chr5.4:64683257-64683276 | MS.gene80661:intron | 35.0% | |
| ! | ACAACTATGCAGTGGATTTA+AGG | + | chr5.4:64680572-64680591 | None:intergenic | 35.0% |
| ! | ACAGCATAGTAAGCTTTTGT+AGG | + | chr5.4:64681238-64681257 | None:intergenic | 35.0% |
| ! | AGATCATTTTCTCGCAGTTT+CGG | + | chr5.4:64680512-64680531 | None:intergenic | 35.0% |
| ! | ATTCTGCTTTATGTGATGGA+AGG | - | chr5.4:64681351-64681370 | MS.gene80661:intron | 35.0% |
| ! | CGAACATAGATGAGATTTTG+TGG | - | chr5.4:64683671-64683690 | MS.gene80661:intron | 35.0% |
| ! | GTTATTGTTGTCTGCTGATT+TGG | - | chr5.4:64684571-64684590 | MS.gene80661:CDS | 35.0% |
| ! | TACATATAGGAAAGGAGTGT+GGG | + | chr5.4:64681782-64681801 | None:intergenic | 35.0% |
| ! | TGACAGTGTTGTTCAATAAC+CGG | - | chr5.4:64681964-64681983 | MS.gene80661:intron | 35.0% |
| !! | ATAGTGTAATGGGCAAATAG+TGG | + | chr5.4:64682586-64682605 | None:intergenic | 35.0% |
| !! | CCTTGTTGTTAATCAAGTTG+TGG | + | chr5.4:64684516-64684535 | None:intergenic | 35.0% |
| !!! | TACACTCCATATTTTTGGTG+TGG | - | chr5.4:64681869-64681888 | MS.gene80661:CDS | 35.0% |
| AAAAAGACACCATTAGAGGC+AGG | + | chr5.4:64682851-64682870 | None:intergenic | 40.0% | |
| AACAACACTGTCATATGGAC+AGG | + | chr5.4:64681957-64681976 | None:intergenic | 40.0% | |
| AACCAACCTGCAAATGATAC+AGG | + | chr5.4:64683049-64683068 | None:intergenic | 40.0% | |
| AATTGCTGCTCATGAAGTTG+AGG | - | chr5.4:64681495-64681514 | MS.gene80661:intron | 40.0% | |
| ACCAAATGGTCCAGGAATTT+AGG | - | chr5.4:64683105-64683124 | MS.gene80661:intron | 40.0% | |
| ACCTAAATTCCTGGACCATT+TGG | + | chr5.4:64683109-64683128 | None:intergenic | 40.0% | |
| AGGGAACACAATTGTCTGTT+AGG | + | chr5.4:64681742-64681761 | None:intergenic | 40.0% | |
| AGGTTGCGAGAAAATGTCAT+GGG | + | chr5.4:64681047-64681066 | None:intergenic | 40.0% | |
| ATACTGAGTCGGTGATTAGA+TGG | - | chr5.4:64682172-64682191 | MS.gene80661:intron | 40.0% | |
| ATATGACTATGCCACATCAG+AGG | + | chr5.4:64681001-64681020 | None:intergenic | 40.0% | |
| ATCCTGTATCATTTGCAGGT+TGG | - | chr5.4:64683044-64683063 | MS.gene80661:intron | 40.0% | |
| ATGACAAGGATCCTAGCATT+TGG | - | chr5.4:64680287-64680306 | MS.gene80661:intron | 40.0% | |
| CAAAACATGGTAAAGCCCTA+AGG | + | chr5.4:64684671-64684690 | None:intergenic | 40.0% | |
| CACTTCTAATGAGAGACGAT+AGG | + | chr5.4:64684483-64684502 | None:intergenic | 40.0% | |
| CAGAATCAATGACGTGTAAG+AGG | + | chr5.4:64682300-64682319 | None:intergenic | 40.0% | |
| CATGAGCAGCAATTTCTGAT+TGG | + | chr5.4:64681489-64681508 | None:intergenic | 40.0% | |
| CTTCTTGGTTCCTCTTTCAA+AGG | - | chr5.4:64680070-64680089 | MS.gene80661:intron | 40.0% | |
| GAAGCTTTCCATCAATGACA+AGG | + | chr5.4:64683010-64683029 | None:intergenic | 40.0% | |
| GACAATCTCGTTTGTCATGT+AGG | - | chr5.4:64682917-64682936 | MS.gene80661:intron | 40.0% | |
| GCAAATGATACAGGATCTCA+TGG | + | chr5.4:64683040-64683059 | None:intergenic | 40.0% | |
| GCAATTAGGAGCTTATGCTA+CGG | - | chr5.4:64680616-64680635 | MS.gene80661:intron | 40.0% | |
| GCTCATGAAGTTGAGGAAAT+AGG | - | chr5.4:64681502-64681521 | MS.gene80661:intron | 40.0% | |
| GTAAACGATGTGTGTGAGAA+GGG | - | chr5.4:64684056-64684075 | MS.gene80661:intron | 40.0% | |
| GTAGGAATTCCCAACTCTTT+AGG | + | chr5.4:64681220-64681239 | None:intergenic | 40.0% | |
| GTGTGCCATACATATAGGAA+AGG | + | chr5.4:64681790-64681809 | None:intergenic | 40.0% | |
| GTTTGGTTGTAGGGTTTAGA+AGG | - | chr5.4:64683256-64683275 | MS.gene80661:intron | 40.0% | |
| TACCTTGACCTTGTCATTGA+TGG | - | chr5.4:64682999-64683018 | MS.gene80661:intron | 40.0% | |
| TACTGAGTCGGTGATTAGAT+GGG | - | chr5.4:64682173-64682192 | MS.gene80661:intron | 40.0% | |
| TAGGTTGCGAGAAAATGTCA+TGG | + | chr5.4:64681048-64681067 | None:intergenic | 40.0% | |
| TATTCTTCTTTCCCTTGTGC+AGG | - | chr5.4:64682712-64682731 | MS.gene80661:intron | 40.0% | |
| TCCATCTCTGTTGTCAATAG+CGG | + | chr5.4:64683862-64683881 | None:intergenic | 40.0% | |
| TCTCATCACTAAACTGCCTT+GGG | - | chr5.4:64682234-64682253 | MS.gene80661:intron | 40.0% | |
| TGAAACTATTGATGCTCTGG+CGG | - | chr5.4:64683080-64683099 | MS.gene80661:intron | 40.0% | |
| TGAAGACGATCTAGAGATCT+AGG | + | chr5.4:64683559-64683578 | None:intergenic | 40.0% | |
| TGAGATCCTGTATCATTTGC+AGG | - | chr5.4:64683040-64683059 | MS.gene80661:intron | 40.0% | |
| TGGGGAAGAGGAGAATAATT+TGG | - | chr5.4:64682380-64682399 | MS.gene80661:intron | 40.0% | |
| TGGGTTTGGCAAAATTACTG+TGG | - | chr5.4:64680715-64680734 | MS.gene80661:intron | 40.0% | |
| TTAGGGTGTGTTTGGTTGTA+GGG | - | chr5.4:64683247-64683266 | MS.gene80661:intron | 40.0% | |
| TTCCATCAATGACAAGGTCA+AGG | + | chr5.4:64683004-64683023 | None:intergenic | 40.0% | |
| TTGGTTGTAGGGTTTAGAAG+GGG | - | chr5.4:64683258-64683277 | MS.gene80661:intron | 40.0% | |
| TTTGTAGCCCTATTGTGTAG+CGG | - | chr5.4:64680901-64680920 | MS.gene80661:intron | 40.0% | |
| ! | ACATATAGGAAAGGAGTGTG+GGG | + | chr5.4:64681781-64681800 | None:intergenic | 40.0% |
| ! | CTATGTTCCAAATCCCGTTT+TGG | - | chr5.4:64681177-64681196 | MS.gene80661:intron | 40.0% |
| ! | GATTTGATCAAGGCTTTTGC+AGG | - | chr5.4:64684334-64684353 | MS.gene80661:CDS | 40.0% |
| ! | GCACTGACACTTCTGATTAA+AGG | + | chr5.4:64680193-64680212 | None:intergenic | 40.0% |
| ! | GGTCAGTGTTGTTAAATAGC+AGG | - | chr5.4:64680785-64680804 | MS.gene80661:intron | 40.0% |
| ! | GGTTTGCTCTGTAGATAGTT+TGG | + | chr5.4:64681695-64681714 | None:intergenic | 40.0% |
| ! | GTTAGTTTCGGCTTAAGCTT+GGG | - | chr5.4:64684101-64684120 | MS.gene80661:intron | 40.0% |
| ! | TGACATTTTCTCGCAACCTA+AGG | - | chr5.4:64681048-64681067 | MS.gene80661:intron | 40.0% |
| ! | TGTTAGTTTCGGCTTAAGCT+TGG | - | chr5.4:64684100-64684119 | MS.gene80661:intron | 40.0% |
| ! | TTTAGGGTGTGTTTGGTTGT+AGG | - | chr5.4:64683246-64683265 | MS.gene80661:intron | 40.0% |
| !! | ACTTTGGATTGGCCGAATTA+CGG | + | chr5.4:64680977-64680996 | None:intergenic | 40.0% |
| !! | CTTACACGTCATTGATTCTG+AGG | - | chr5.4:64682300-64682319 | MS.gene80661:intron | 40.0% |
| !! | TGCTTTCTTTAGGGTGTGTT+TGG | - | chr5.4:64683239-64683258 | MS.gene80661:intron | 40.0% |
| !! | TTGGCGATCAGCTATTTTCT+GGG | - | chr5.4:64682629-64682648 | MS.gene80661:intron | 40.0% |
| !! | TTTGGCGATCAGCTATTTTC+TGG | - | chr5.4:64682628-64682647 | MS.gene80661:intron | 40.0% |
| !! | TTTTGTTGTCCTGCCTCTAA+TGG | - | chr5.4:64682839-64682858 | MS.gene80661:intron | 40.0% |
| AAAGCTCTGTGGATAGTCAG+AGG | - | chr5.4:64683978-64683997 | MS.gene80661:intron | 45.0% | |
| AAATGTTCCACTCCTGCACA+AGG | + | chr5.4:64682727-64682746 | None:intergenic | 45.0% | |
| AACATGGTAAAGCCCTAAGG+AGG | + | chr5.4:64684668-64684687 | None:intergenic | 45.0% | |
| AATGGCACTCACTGTGAAAG+TGG | + | chr5.4:64680949-64680968 | None:intergenic | 45.0% | |
| AATGTTCCACTCCTGCACAA+GGG | + | chr5.4:64682726-64682745 | None:intergenic | 45.0% | |
| ACACAATTGTCTGTTAGGCC+AGG | + | chr5.4:64681737-64681756 | None:intergenic | 45.0% | |
| ACCGCTATTGACAACAGAGA+TGG | - | chr5.4:64683858-64683877 | MS.gene80661:intron | 45.0% | |
| ACTGAGTCGGTGATTAGATG+GGG | - | chr5.4:64682174-64682193 | MS.gene80661:intron | 45.0% | |
| AGACAATTGTGTTCCCTTCC+TGG | - | chr5.4:64681745-64681764 | MS.gene80661:intron | 45.0% | |
| AGCTTACTATGCTGTTGAGG+AGG | - | chr5.4:64681243-64681262 | MS.gene80661:intron | 45.0% | |
| AGGCAAAAGCGGAACAAAAG+CGG | + | chr5.4:64683764-64683783 | None:intergenic | 45.0% | |
| ATACCGAGTGTAGCTTGGTT+GGG | - | chr5.4:64680689-64680708 | MS.gene80661:intron | 45.0% | |
| ATAGCATAGCAGCGCTATAC+CGG | + | chr5.4:64681986-64682005 | None:intergenic | 45.0% | |
| CAAAGCTCCTCGGAGAAATT+TGG | + | chr5.4:64684138-64684157 | None:intergenic | 45.0% | |
| CACAATTGTCTGTTAGGCCA+GGG | + | chr5.4:64681736-64681755 | None:intergenic | 45.0% | |
| CGTTTCCGCTTTGACAACTA+TGG | + | chr5.4:64683325-64683344 | None:intergenic | 45.0% | |
| CTCTCATCACTAAACTGCCT+TGG | - | chr5.4:64682233-64682252 | MS.gene80661:intron | 45.0% | |
| GCAAAACTCACAGCCTTGAA+GGG | - | chr5.4:64682945-64682964 | MS.gene80661:intron | 45.0% | |
| GCCGTTTGAAGAAGATGACA+AGG | - | chr5.4:64680273-64680292 | MS.gene80661:intron | 45.0% | |
| GGACACCATAGTTGTCAAAG+CGG | - | chr5.4:64683317-64683336 | MS.gene80661:intron | 45.0% | |
| GGTAAACGATGTGTGTGAGA+AGG | - | chr5.4:64684055-64684074 | MS.gene80661:intron | 45.0% | |
| GTGGTGTGTGCCATACATAT+AGG | + | chr5.4:64681795-64681814 | None:intergenic | 45.0% | |
| GTGTGAGAAGGGAAATGAGA+TGG | - | chr5.4:64684067-64684086 | MS.gene80661:intron | 45.0% | |
| GTTGAGGAGGTTAAAGAGGT+GGG | - | chr5.4:64681256-64681275 | MS.gene80661:intron | 45.0% | |
| TAGTTGTCAAAGCGGAAACG+CGG | - | chr5.4:64683325-64683344 | MS.gene80661:intron | 45.0% | |
| TATACCGAGTGTAGCTTGGT+TGG | - | chr5.4:64680688-64680707 | MS.gene80661:intron | 45.0% | |
| TCACAGAGAATATGCTTCCC+TGG | - | chr5.4:64681716-64681735 | MS.gene80661:intron | 45.0% | |
| TCTTGCATCCAAACCCTTCA+AGG | + | chr5.4:64682961-64682980 | None:intergenic | 45.0% | |
| TGACATTAAGATTGGGCAGC+AGG | + | chr5.4:64684312-64684331 | None:intergenic | 45.0% | |
| TGAGAGTTTACCTAGGTCGT+AGG | + | chr5.4:64682219-64682238 | None:intergenic | 45.0% | |
| TGCAAAACTCACAGCCTTGA+AGG | - | chr5.4:64682944-64682963 | MS.gene80661:intron | 45.0% | |
| TGCCACTCAGAAGAGTCAAA+AGG | - | chr5.4:64681450-64681469 | MS.gene80661:intron | 45.0% | |
| TGCCATTGCTCACCGTAATT+CGG | - | chr5.4:64680962-64680981 | MS.gene80661:intron | 45.0% | |
| TGCTGTTGAGGAGGTTAAAG+AGG | - | chr5.4:64681252-64681271 | MS.gene80661:intron | 45.0% | |
| TGTAGGGTTTAGAAGGGGAA+GGG | - | chr5.4:64683263-64683282 | MS.gene80661:intron | 45.0% | |
| TGTTGAGGAGGTTAAAGAGG+TGG | - | chr5.4:64681255-64681274 | MS.gene80661:intron | 45.0% | |
| TTACCTAGGTCGTAGGTCTT+AGG | + | chr5.4:64682212-64682231 | None:intergenic | 45.0% | |
| TTCCACTAGCACTGCAATAG+CGG | - | chr5.4:64682057-64682076 | MS.gene80661:intron | 45.0% | |
| TTGTAGGGTTTAGAAGGGGA+AGG | - | chr5.4:64683262-64683281 | MS.gene80661:intron | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | + | chr5.4:64683852-64683871 | None:intergenic | 45.0% | |
| ! | AATCCAAAGTGCCTCTGATG+TGG | - | chr5.4:64680987-64681006 | MS.gene80661:intron | 45.0% |
| ! | CATATAGGAAAGGAGTGTGG+GGG | + | chr5.4:64681780-64681799 | None:intergenic | 45.0% |
| ! | GGGAAGCATATTCTCTGTGA+AGG | + | chr5.4:64681716-64681735 | None:intergenic | 45.0% |
| ! | GTAGCTAAGGAGCATGTTGT+GGG | - | chr5.4:64680470-64680489 | MS.gene80661:intron | 45.0% |
| ! | TAGCTAAGGAGCATGTTGTG+GGG | - | chr5.4:64680471-64680490 | MS.gene80661:intron | 45.0% |
| ! | TGTAGCTAAGGAGCATGTTG+TGG | - | chr5.4:64680469-64680488 | MS.gene80661:intron | 45.0% |
| !! | AAAAGGCACCTCTGTTGCAA+GGG | + | chr5.4:64682782-64682801 | None:intergenic | 45.0% |
| !! | ACATCAGAGGCACTTTGGAT+TGG | + | chr5.4:64680988-64681007 | None:intergenic | 45.0% |
| !! | AGCTAGCAAGTTGGTTAGAG+GGG | - | chr5.4:64684003-64684022 | MS.gene80661:intron | 45.0% |
| !! | GACCTTTTGACTCTTCTGAG+TGG | + | chr5.4:64681455-64681474 | None:intergenic | 45.0% |
| !! | GAGCTAGCAAGTTGGTTAGA+GGG | - | chr5.4:64684002-64684021 | MS.gene80661:intron | 45.0% |
| !! | GAGCTTTGTTCTGGGGTTAT+TGG | - | chr5.4:64684150-64684169 | MS.gene80661:intron | 45.0% |
| !! | GTAGCTGTTGGTGATATCGA+CGG | + | chr5.4:64680098-64680117 | None:intergenic | 45.0% |
| !! | GTGTAATGGGCAAATAGTGG+AGG | + | chr5.4:64682583-64682602 | None:intergenic | 45.0% |
| !! | TAGCGTATCGACTTTCGTTG+CGG | + | chr5.4:64682031-64682050 | None:intergenic | 45.0% |
| !! | TGAGCTAGCAAGTTGGTTAG+AGG | - | chr5.4:64684001-64684020 | MS.gene80661:intron | 45.0% |
| AACCCCAGAACAAAGCTCCT+CGG | + | chr5.4:64684148-64684167 | None:intergenic | 50.0% | |
| ACTAGCACTGCAATAGCGGT+GGG | - | chr5.4:64682061-64682080 | MS.gene80661:intron | 50.0% | |
| ACTCACAGCCTTGAAGGGTT+TGG | - | chr5.4:64682950-64682969 | MS.gene80661:intron | 50.0% | |
| ACTCCTAAGACCTACGACCT+AGG | - | chr5.4:64682206-64682225 | MS.gene80661:intron | 50.0% | |
| AGGGTTTAGGAGAAGAAGGG+AGG | + | chr5.4:64683913-64683932 | None:intergenic | 50.0% | |
| ATGCTCTGGCGGTTACCAAA+TGG | - | chr5.4:64683091-64683110 | MS.gene80661:intron | 50.0% | |
| CATTAGCACCCTTGCAACAG+AGG | - | chr5.4:64682771-64682790 | MS.gene80661:intron | 50.0% | |
| CTCCAGAAAGAATGGTGAGG+TGG | + | chr5.4:64681840-64681859 | None:intergenic | 50.0% | |
| CTTCCTGCTGTACTTGGTAC+AGG | + | chr5.4:64684907-64684926 | None:intergenic | 50.0% | |
| GAGAGGAGCTCCAGAAAGAA+TGG | + | chr5.4:64681848-64681867 | None:intergenic | 50.0% | |
| GAGCTCCAGAAAGAATGGTG+AGG | + | chr5.4:64681843-64681862 | None:intergenic | 50.0% | |
| GATATCACCAACAGCTACGC+CGG | - | chr5.4:64680100-64680119 | MS.gene80661:intron | 50.0% | |
| GGCAAAAGCGGAACAAAAGC+GGG | + | chr5.4:64683763-64683782 | None:intergenic | 50.0% | |
| GGGAATGCCAAATTTCTCCG+AGG | - | chr5.4:64684128-64684147 | MS.gene80661:intron | 50.0% | |
| GGGTTTAGGAGAAGAAGGGA+GGG | + | chr5.4:64683912-64683931 | None:intergenic | 50.0% | |
| GGTTTAGGAGAAGAAGGGAG+GGG | + | chr5.4:64683911-64683930 | None:intergenic | 50.0% | |
| GTAGGGTTTAGAAGGGGAAG+GGG | - | chr5.4:64683264-64683283 | MS.gene80661:intron | 50.0% | |
| GTTGTGGGGTGGTATAGTAC+TGG | - | chr5.4:64680485-64680504 | MS.gene80661:intron | 50.0% | |
| TAGGGTTTAGAAGGGGAAGG+GGG | - | chr5.4:64683265-64683284 | MS.gene80661:intron | 50.0% | |
| TCAGAGGTGAGCTAGCAAGT+TGG | - | chr5.4:64683994-64684013 | MS.gene80661:intron | 50.0% | |
| TGCAATAGCGGTGGGCATAT+TGG | - | chr5.4:64682069-64682088 | MS.gene80661:intron | 50.0% | |
| TGCCACCTCACCATTCTTTC+TGG | - | chr5.4:64681835-64681854 | MS.gene80661:CDS | 50.0% | |
| TTCTTTCCCTTGTGCAGGAG+TGG | - | chr5.4:64682717-64682736 | MS.gene80661:intron | 50.0% | |
| ! | AATTGTACCGGCGTAGCTGT+TGG | + | chr5.4:64680110-64680129 | None:intergenic | 50.0% |
| ! | ATCGACGGTGCCTTTGAAAG+AGG | + | chr5.4:64680083-64680102 | None:intergenic | 50.0% |
| ! | TATGGAGATTGGAGTGCCCA+AGG | + | chr5.4:64682253-64682272 | None:intergenic | 50.0% |
| !! | ATGCCACATCAGAGGCACTT+TGG | + | chr5.4:64680993-64681012 | None:intergenic | 50.0% |
| !! | CAAAAGGCACCTCTGTTGCA+AGG | + | chr5.4:64682783-64682802 | None:intergenic | 50.0% |
| !! | CTCTGTTGCAAGGGTGCTAA+TGG | + | chr5.4:64682773-64682792 | None:intergenic | 50.0% |
| !! | GCTAGCAAGTTGGTTAGAGG+GGG | - | chr5.4:64684004-64684023 | MS.gene80661:intron | 50.0% |
| !! | TCTCCGAGGAGCTTTGTTCT+GGG | - | chr5.4:64684142-64684161 | MS.gene80661:intron | 50.0% |
| !! | TTCTCCGAGGAGCTTTGTTC+TGG | - | chr5.4:64684141-64684160 | MS.gene80661:intron | 50.0% |
| AGAGAGGGAACACGTGGAGT+CGG | - | chr5.4:64684029-64684048 | MS.gene80661:intron | 55.0% | |
| AGGGTTTAGAAGGGGAAGGG+GGG | - | chr5.4:64683266-64683285 | MS.gene80661:intron | 55.0% | |
| AGTCGCGCGTTAGGCAAAAG+CGG | + | chr5.4:64683775-64683794 | None:intergenic | 55.0% | |
| AGTGTAGCTTGGTTGGGTGG+TGG | - | chr5.4:64680695-64680714 | MS.gene80661:intron | 55.0% | |
| CACCGCTATTGCAGTGCTAG+TGG | + | chr5.4:64682062-64682081 | None:intergenic | 55.0% | |
| CACTAGCACTGCAATAGCGG+TGG | - | chr5.4:64682060-64682079 | MS.gene80661:intron | 55.0% | |
| CCACCCAACCAAGCTACACT+CGG | + | chr5.4:64680695-64680714 | None:intergenic | 55.0% | |
| CGCGTCGTTGGAGTTCTTCT+TGG | - | chr5.4:64680055-64680074 | MS.gene80661:intron | 55.0% | |
| GAACAAAAGCGGGTCAACGC+GGG | + | chr5.4:64683753-64683772 | None:intergenic | 55.0% | |
| GACGCGTTTGCGAGTGTCTT+TGG | + | chr5.4:64680041-64680060 | None:intergenic | 55.0% | |
| GGAACAAAAGCGGGTCAACG+CGG | + | chr5.4:64683754-64683773 | None:intergenic | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | - | chr5.4:64683351-64683370 | MS.gene80661:CDS | 55.0% | |
| GGCCGAATTACGGTGAGCAA+TGG | + | chr5.4:64680967-64680986 | None:intergenic | 55.0% | |
| GGTGGGCATATTGGCGATAG+CGG | - | chr5.4:64682078-64682097 | MS.gene80661:CDS | 55.0% | |
| GTGCCTGTACCAAGTACAGC+AGG | - | chr5.4:64684901-64684920 | MS.gene80661:CDS | 55.0% | |
| GTGTAGCTTGGTTGGGTGGT+GGG | - | chr5.4:64680696-64680715 | MS.gene80661:intron | 55.0% | |
| TAGGAGAAGAAGGGAGGGGA+GGG | + | chr5.4:64683907-64683926 | None:intergenic | 55.0% | |
| TCGGCTTAAGCTTGGGCAGA+GGG | - | chr5.4:64684108-64684127 | MS.gene80661:intron | 55.0% | |
| TGGCGGTTACCAAATGGTCC+AGG | - | chr5.4:64683097-64683116 | MS.gene80661:intron | 55.0% | |
| TGGTTAGAGGGGGAGAGAGA+GGG | - | chr5.4:64684014-64684033 | MS.gene80661:intron | 55.0% | |
| TTAGGAGAAGAAGGGAGGGG+AGG | + | chr5.4:64683908-64683927 | None:intergenic | 55.0% | |
| TTCGGCTTAAGCTTGGGCAG+AGG | - | chr5.4:64684107-64684126 | MS.gene80661:intron | 55.0% | |
| TTGGTTAGAGGGGGAGAGAG+AGG | - | chr5.4:64684013-64684032 | MS.gene80661:intron | 55.0% | |
| ! | AAGGAGTGTGGGGGAGTTAG+TGG | + | chr5.4:64681771-64681790 | None:intergenic | 55.0% |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | + | chr5.4:64683360-64683379 | None:intergenic | 55.0% |
| ! | CTAAGGAGCATGTTGTGGGG+TGG | - | chr5.4:64680474-64680493 | MS.gene80661:intron | 55.0% |
| ! | CTTTTGCCTAACGCGCGACT+CGG | - | chr5.4:64683775-64683794 | MS.gene80661:intron | 55.0% |
| ! | TACCGCGCCGCGTCAATTTT+TGG | + | chr5.4:64683361-64683380 | None:intergenic | 55.0% |
| !! | CTCCGAGGAGCTTTGTTCTG+GGG | - | chr5.4:64684143-64684162 | MS.gene80661:intron | 55.0% |
| AATTGACGCGGCGCGGTAAG+CGG | - | chr5.4:64683363-64683382 | MS.gene80661:CDS | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | - | chr5.4:64683356-64683375 | MS.gene80661:CDS | 60.0% | |
| CCGAGTGTAGCTTGGTTGGG+TGG | - | chr5.4:64680692-64680711 | MS.gene80661:intron | 60.0% | |
| GACACTCGCAAACGCGTCGT+TGG | - | chr5.4:64680043-64680062 | MS.gene80661:intron | 60.0% | |
| GAGAGGGAACACGTGGAGTC+GGG | - | chr5.4:64684030-64684049 | MS.gene80661:intron | 60.0% | |
| GGCAAAAAGCGGGTCAACGC+GGG | + | chr5.4:64683732-64683751 | None:intergenic | 60.0% | |
| GGGCAAAAAGCGGGTCAACG+CGG | + | chr5.4:64683733-64683752 | None:intergenic | 60.0% | |
| GGGGAGTTAGTGGCCAGGAA+GGG | + | chr5.4:64681761-64681780 | None:intergenic | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | + | chr5.4:64683722-64683741 | None:intergenic | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | + | chr5.4:64683721-64683740 | None:intergenic | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | + | chr5.4:64683359-64683378 | None:intergenic | 60.0% |
| ! | GCGGGCGCTTTTACATGACG+CGG | - | chr5.4:64683404-64683423 | MS.gene80661:intron | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | + | chr5.4:64683356-64683375 | None:intergenic | 60.0% |
| !! | GCTTGGTTGGGTGGTGGGTT+TGG | - | chr5.4:64680701-64680720 | MS.gene80661:intron | 60.0% |
| AGGGAACACGTGGAGTCGGG+AGG | - | chr5.4:64684033-64684052 | MS.gene80661:intron | 65.0% | |
| ATTGACGCGGCGCGGTAAGC+GGG | - | chr5.4:64683364-64683383 | MS.gene80661:CDS | 65.0% | |
| GGGAACACGTGGAGTCGGGA+GGG | - | chr5.4:64684034-64684053 | MS.gene80661:intron | 65.0% | |
| GGGGAGAGAGAGGGAACACG+TGG | - | chr5.4:64684023-64684042 | MS.gene80661:intron | 65.0% | |
| GGGGGAGTTAGTGGCCAGGA+AGG | + | chr5.4:64681762-64681781 | None:intergenic | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | - | chr5.4:64683330-64683349 | MS.gene80661:intron | 65.0% | |
| GTGTGGGGGAGTTAGTGGCC+AGG | + | chr5.4:64681766-64681785 | None:intergenic | 65.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | + | chr5.4:64683784-64683803 | None:intergenic | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | - | chr5.4:64683795-64683814 | MS.gene80661:intron | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | + | chr5.4:64683841-64683860 | None:intergenic | 70.0% | |
| ! | AACGCGGCGCGATCGCGGCG+CGG | + | chr5.4:64683836-64683855 | None:intergenic | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | - | chr5.4:64683374-64683393 | MS.gene80661:CDS | 80.0% |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | - | chr5.4:64683375-64683394 | MS.gene80661:CDS | 80.0% |
| ! | GGCGCGATCGCGGCGCGGAG+CGG | + | chr5.4:64683831-64683850 | None:intergenic | 85.0% |
| ! | GCGCGACGCGGGCGCGACGC+GGG | - | chr5.4:64683386-64683405 | MS.gene80661:CDS | 90.0% |
| ! | GGCGCGACGCGGGCGCGACG+CGG | - | chr5.4:64683385-64683404 | MS.gene80661:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 64679935 | 64684930 | 64679935 | ID=MS.gene80661 |
| chr5.4 | mRNA | 64679935 | 64684930 | 64679935 | ID=MS.gene80661.t1;Parent=MS.gene80661 |
| chr5.4 | exon | 64684744 | 64684930 | 64684744 | ID=MS.gene80661.t1.exon1;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64684744 | 64684930 | 64684744 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64684501 | 64684593 | 64684501 | ID=MS.gene80661.t1.exon2;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64684501 | 64684593 | 64684501 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64684310 | 64684391 | 64684310 | ID=MS.gene80661.t1.exon3;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64684310 | 64684391 | 64684310 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64683592 | 64683688 | 64683592 | ID=MS.gene80661.t1.exon4;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64683592 | 64683688 | 64683592 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64683342 | 64683417 | 64683342 | ID=MS.gene80661.t1.exon5;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64683342 | 64683417 | 64683342 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64682073 | 64682131 | 64682073 | ID=MS.gene80661.t1.exon6;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64682073 | 64682131 | 64682073 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64681804 | 64681926 | 64681804 | ID=MS.gene80661.t1.exon7;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64681804 | 64681926 | 64681804 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64680510 | 64680567 | 64680510 | ID=MS.gene80661.t1.exon8;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64680510 | 64680567 | 64680510 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64680331 | 64680416 | 64680331 | ID=MS.gene80661.t1.exon9;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64680331 | 64680416 | 64680331 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| chr5.4 | exon | 64679935 | 64680006 | 64679935 | ID=MS.gene80661.t1.exon10;Parent=MS.gene80661.t1 |
| chr5.4 | CDS | 64679935 | 64680006 | 64679935 | ID=cds.MS.gene80661.t1;Parent=MS.gene80661.t1 |
| Gene Sequence |
| Protein sequence |
