Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56675.t1 | XP_003616580.1 | 100 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 1.50E-168 | 602.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56675.t1 | O24412 | 89.9 | 308 | 31 | 0 | 1 | 308 | 1 | 308 | 1.8e-154 | 546.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56675.t1 | B7FLW2 | 100.0 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 1.1e-168 | 602.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051975 | MS.gene56675 | 0.808236 | 3.42E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene56675 | 0.823788 | 1.15E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56675.t1 | MTR_5g081980 | 100.000 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 0.0 | 629 |
| MS.gene56675.t1 | MTR_3g070180 | 94.822 | 309 | 16 | 0 | 1 | 309 | 1 | 309 | 0.0 | 598 |
| MS.gene56675.t1 | MTR_3g070190 | 32.841 | 271 | 165 | 6 | 19 | 285 | 25 | 282 | 6.31e-35 | 128 |
| MS.gene56675.t1 | MTR_5g082000 | 31.365 | 271 | 169 | 6 | 19 | 285 | 21 | 278 | 2.82e-31 | 119 |
| MS.gene56675.t1 | MTR_3g009270 | 26.014 | 296 | 181 | 6 | 19 | 285 | 13 | 299 | 2.58e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56675.t1 | AT5G05780 | 89.935 | 308 | 31 | 0 | 1 | 308 | 1 | 308 | 0.0 | 571 |
| MS.gene56675.t1 | AT3G11270 | 89.508 | 305 | 32 | 0 | 1 | 305 | 1 | 305 | 0.0 | 563 |
| MS.gene56675.t1 | AT5G05780 | 88.961 | 308 | 31 | 1 | 1 | 308 | 1 | 305 | 0.0 | 560 |
| MS.gene56675.t1 | AT3G11270 | 88.525 | 305 | 32 | 1 | 1 | 305 | 1 | 302 | 0.0 | 551 |
| MS.gene56675.t1 | AT2G39990 | 29.487 | 234 | 148 | 6 | 19 | 248 | 30 | 250 | 3.87e-25 | 102 |
| MS.gene56675.t1 | AT4G26430 | 25.081 | 307 | 191 | 7 | 19 | 295 | 13 | 310 | 7.49e-23 | 96.7 |
| MS.gene56675.t1 | AT5G56280 | 24.262 | 305 | 192 | 7 | 19 | 295 | 13 | 306 | 6.81e-22 | 94.4 |
Find 63 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACAGGATCTCATGGTTTA+AGG | 0.226556 | 5.1:+64229262 | None:intergenic |
| CGCGTCGTTGGAGTTCTTCT+TGG | 0.238114 | 5.1:-64232207 | MS.gene56675:CDS |
| ATTATAACCAAAACGGGATT+TGG | 0.243791 | 5.1:+64231067 | None:intergenic |
| GTAGGAATTCCCAACTCTTT+AGG | 0.247111 | 5.1:+64231034 | None:intergenic |
| TACCTTGACCTTGTCATTGA+TGG | 0.274529 | 5.1:-64229293 | MS.gene56675:CDS |
| GACGCGTTTGCGAGTGTCTT+TGG | 0.305618 | 5.1:+64232224 | None:intergenic |
| CTCTGTTGCAAGGGTGCTAA+TGG | 0.335329 | 5.1:+64229522 | None:intergenic |
| GCTCATGAAGTTGAGGAAAT+AGG | 0.335482 | 5.1:-64230750 | MS.gene56675:intron |
| TGAGATCCTGTATCATTTGC+AGG | 0.345264 | 5.1:-64229252 | MS.gene56675:intron |
| CTATGTTCCAAATCCCGTTT+TGG | 0.360839 | 5.1:-64231074 | MS.gene56675:CDS |
| CAAATCAGTGACATTAAGAT+TGG | 0.377033 | 5.1:+64228533 | None:intergenic |
| ACATCAATTATAACCAAAAC+GGG | 0.396892 | 5.1:+64231061 | None:intergenic |
| ACTCACAGCCTTGAAGGGTT+TGG | 0.398386 | 5.1:-64229342 | MS.gene56675:CDS |
| TCTTGCATCCAAACCCTTCA+AGG | 0.405808 | 5.1:+64229334 | None:intergenic |
| CATGAGCAGCAATTTCTGAT+TGG | 0.415675 | 5.1:+64230766 | None:intergenic |
| ATGACAAGGATCCTAGCATT+TGG | 0.417257 | 5.1:-64231976 | MS.gene56675:CDS |
| CTTCTTGGTTCCTCTTTCAA+AGG | 0.424962 | 5.1:-64232192 | MS.gene56675:CDS |
| AACATCAATTATAACCAAAA+CGG | 0.431934 | 5.1:+64231060 | None:intergenic |
| TAATGTCACTGATTTGATCA+AGG | 0.437836 | 5.1:-64228526 | MS.gene56675:CDS |
| TGACATTAAGATTGGGCAGC+AGG | 0.443727 | 5.1:+64228541 | None:intergenic |
| GATGTTGAACCTAAAGAGTT+GGG | 0.449227 | 5.1:-64231043 | MS.gene56675:CDS |
| TACAGGATCTCATGGTTTAA+GGG | 0.462303 | 5.1:+64229263 | None:intergenic |
| TGCAAAACTCACAGCCTTGA+AGG | 0.463569 | 5.1:-64229348 | MS.gene56675:CDS |
| TGTAGCTAAGGAGCATGTTG+TGG | 0.468792 | 5.1:-64231794 | MS.gene56675:intron |
| TCCTTGTCATCTTCTTCAAA+CGG | 0.478344 | 5.1:+64231989 | None:intergenic |
| TCTCAACTTCCTGCTGTACT+TGG | 0.483401 | 5.1:+64227940 | None:intergenic |
| TGATGTTGAACCTAAAGAGT+TGG | 0.483855 | 5.1:-64231044 | MS.gene56675:CDS |
| GTAGCTAAGGAGCATGTTGT+GGG | 0.499396 | 5.1:-64231793 | MS.gene56675:intron |
| TCTATGTTCAAGAGAATCAA+TGG | 0.505078 | 5.1:-64231920 | MS.gene56675:intron |
| TGCTCAACAAAGAACATGAA+AGG | 0.510479 | 5.1:-64227990 | MS.gene56675:CDS |
| GTTGTGGGGTGGTATAGTAC+TGG | 0.515160 | 5.1:-64231778 | MS.gene56675:CDS |
| CTTCCTGCTGTACTTGGTAC+AGG | 0.516124 | 5.1:+64227946 | None:intergenic |
| AACCAACCTGCAAATGATAC+AGG | 0.522061 | 5.1:+64229246 | None:intergenic |
| TGCTGTTGAGGAGGTTAAAG+AGG | 0.523785 | 5.1:-64230999 | MS.gene56675:intron |
| GACACTCGCAAACGCGTCGT+TGG | 0.526211 | 5.1:-64232219 | MS.gene56675:CDS |
| GAAAACTAATGATCAAATGC+TGG | 0.532471 | 5.1:-64228400 | MS.gene56675:CDS |
| CCTTGTTGTTAATCAAGTTG+TGG | 0.533219 | 5.1:+64228337 | None:intergenic |
| GCTCAACAAAGAACATGAAA+GGG | 0.533816 | 5.1:-64227989 | MS.gene56675:CDS |
| AAATCAGTGACATTAAGATT+GGG | 0.537245 | 5.1:+64228534 | None:intergenic |
| CAAAAGGCACCTCTGTTGCA+AGG | 0.539561 | 5.1:+64229512 | None:intergenic |
| TGATCAAGAAACCAAATGCT+AGG | 0.549445 | 5.1:+64231965 | None:intergenic |
| ACATTTGCTTAGAGATGTGA+AGG | 0.560287 | 5.1:-64229551 | MS.gene56675:CDS |
| ATCGACGGTGCCTTTGAAAG+AGG | 0.562674 | 5.1:+64232182 | None:intergenic |
| GCAAAACTCACAGCCTTGAA+GGG | 0.565234 | 5.1:-64229347 | MS.gene56675:CDS |
| AATTGCTGCTCATGAAGTTG+AGG | 0.565331 | 5.1:-64230757 | MS.gene56675:CDS |
| ACTATGCTGAGTAAAACTAA+AGG | 0.568083 | 5.1:+64232267 | None:intergenic |
| GCAAATGATACAGGATCTCA+TGG | 0.569112 | 5.1:+64229255 | None:intergenic |
| TGCCACTCAGAAGAGTCAAA+AGG | 0.570358 | 5.1:-64230802 | MS.gene56675:CDS |
| AAAAGCTTACTATGCTGTTG+AGG | 0.571528 | 5.1:-64231011 | MS.gene56675:CDS |
| GTGCCTGTACCAAGTACAGC+AGG | 0.578421 | 5.1:-64227949 | MS.gene56675:CDS |
| AGCTTACTATGCTGTTGAGG+AGG | 0.588880 | 5.1:-64231008 | MS.gene56675:CDS |
| CATTAGCACCCTTGCAACAG+AGG | 0.592118 | 5.1:-64229521 | MS.gene56675:intron |
| CCACAACTTGATTAACAACA+AGG | 0.604169 | 5.1:-64228337 | MS.gene56675:intron |
| TTCCATCAATGACAAGGTCA+AGG | 0.607781 | 5.1:+64229291 | None:intergenic |
| GATATCACCAACAGCTACGC+CGG | 0.611908 | 5.1:-64232162 | MS.gene56675:intron |
| AAAAGGCACCTCTGTTGCAA+GGG | 0.618690 | 5.1:+64229513 | None:intergenic |
| GCCGTTTGAAGAAGATGACA+AGG | 0.651393 | 5.1:-64231990 | MS.gene56675:CDS |
| AATTGTACCGGCGTAGCTGT+TGG | 0.654663 | 5.1:+64232155 | None:intergenic |
| GTAGCTGTTGGTGATATCGA+CGG | 0.656872 | 5.1:+64232167 | None:intergenic |
| CTAAGGAGCATGTTGTGGGG+TGG | 0.656967 | 5.1:-64231789 | MS.gene56675:CDS |
| CACTTCTAATGAGAGACGAT+AGG | 0.662773 | 5.1:+64228370 | None:intergenic |
| GAAGCTTTCCATCAATGACA+AGG | 0.673682 | 5.1:+64229285 | None:intergenic |
| TAGCTAAGGAGCATGTTGTG+GGG | 0.682914 | 5.1:-64231792 | MS.gene56675:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAGAATATAAATTTAT+AGG | + | chr5.1:64230680-64230699 | None:intergenic | 10.0% |
| !!! | TAATTAAGTGTTATTAATAA+CGG | + | chr5.1:64230634-64230653 | None:intergenic | 10.0% |
| !!! | TACTTTTCTTTTTTAAATTA+TGG | - | chr5.1:64231277-64231296 | MS.gene56675:intron | 10.0% |
| !!! | ATTTGCATGTTTTTTTATAT+TGG | - | chr5.1:64228399-64228418 | MS.gene56675:CDS | 15.0% |
| !!! | TGATTTGGTTTTATATTTAT+GGG | - | chr5.1:64232005-64232024 | MS.gene56675:intron | 15.0% |
| !!! | TTTGCATGTTTTTTTATATT+GGG | - | chr5.1:64228400-64228419 | MS.gene56675:CDS | 15.0% |
| !! | AAAATAAAATAATGCTGAGT+CGG | - | chr5.1:64230180-64230199 | MS.gene56675:intron | 20.0% |
| !! | AAATTTGATGTGATTAAAGA+TGG | - | chr5.1:64228423-64228442 | MS.gene56675:intron | 20.0% |
| !! | AACATCAATTATAACCAAAA+CGG | + | chr5.1:64229212-64229231 | None:intergenic | 20.0% |
| !! | AATAGTTCAAACAACTAATT+AGG | + | chr5.1:64230507-64230526 | None:intergenic | 20.0% |
| !! | AATCAATCAATAATACATAG+AGG | + | chr5.1:64231830-64231849 | None:intergenic | 20.0% |
| !! | AATTGTATTACTTGAAAACA+AGG | + | chr5.1:64231619-64231638 | None:intergenic | 20.0% |
| !! | ATATTTGCAAGAAAGATAAA+AGG | + | chr5.1:64229309-64229328 | None:intergenic | 20.0% |
| !! | ATTGAAATTGAAAATTGTAC+CGG | + | chr5.1:64228129-64228148 | None:intergenic | 20.0% |
| !! | GTTATTGCTTACATATATAA+CGG | - | chr5.1:64230115-64230134 | MS.gene56675:intron | 20.0% |
| !! | TCATAAACATAGCTATAAAA+AGG | + | chr5.1:64228656-64228675 | None:intergenic | 20.0% |
| !! | TTCAATATAATTACATGTGT+CGG | - | chr5.1:64228157-64228176 | MS.gene56675:intron | 20.0% |
| !!! | ATTTGTCTAATTTGATTTCT+GGG | + | chr5.1:64229610-64229629 | None:intergenic | 20.0% |
| !!! | CACATAGTTTAATTTAAAAC+TGG | - | chr5.1:64231131-64231150 | MS.gene56675:intron | 20.0% |
| !!! | CTGATTTGGTTTTATATTTA+TGG | - | chr5.1:64232004-64232023 | MS.gene56675:intron | 20.0% |
| !!! | TATTTCTCATTGATGATTTT+TGG | - | chr5.1:64230587-64230606 | MS.gene56675:intron | 20.0% |
| !!! | TATTTGTCTAATTTGATTTC+TGG | + | chr5.1:64229611-64229630 | None:intergenic | 20.0% |
| !!! | TGATTTATTTTTTGTAGCTA+AGG | - | chr5.1:64228463-64228482 | MS.gene56675:intron | 20.0% |
| !!! | TTACTTCTAATTTTTGTTTC+TGG | - | chr5.1:64230446-64230465 | MS.gene56675:intron | 20.0% |
| !!! | TTTTGTTTATTACTGCAATT+AGG | - | chr5.1:64228608-64228627 | MS.gene56675:intron | 20.0% |
| ! | AAATCAGTGACATTAAGATT+GGG | + | chr5.1:64231738-64231757 | None:intergenic | 25.0% |
| ! | AATAGCAGTTTGTCTAAATT+TGG | + | chr5.1:64228844-64228863 | None:intergenic | 25.0% |
| ! | AATGAGGATAATGATTATGT+TGG | - | chr5.1:64230379-64230398 | MS.gene56675:intron | 25.0% |
| ! | ACAACCAATTATTAATCCTT+AGG | + | chr5.1:64229083-64229102 | None:intergenic | 25.0% |
| ! | ACATCAATTATAACCAAAAC+GGG | + | chr5.1:64229211-64229230 | None:intergenic | 25.0% |
| ! | AGAGAAACAAAATGAATTAG+TGG | + | chr5.1:64229829-64229848 | None:intergenic | 25.0% |
| ! | ATCAATAGGTTCATAGATTA+TGG | + | chr5.1:64231050-64231069 | None:intergenic | 25.0% |
| ! | ATGAGGATAATGATTATGTT+GGG | - | chr5.1:64230380-64230399 | MS.gene56675:intron | 25.0% |
| ! | ATTGAAAAATACACCATTAG+AGG | + | chr5.1:64230832-64230851 | None:intergenic | 25.0% |
| ! | GAAACTTAATTGTTAGATGT+AGG | - | chr5.1:64229413-64229432 | MS.gene56675:intron | 25.0% |
| ! | GCACTGTTAAAAACAAATAA+AGG | + | chr5.1:64228261-64228280 | None:intergenic | 25.0% |
| ! | TAAAAACGCAACAAATTTCA+TGG | - | chr5.1:64227952-64227971 | MS.gene56675:CDS | 25.0% |
| ! | TATTAAGTGAAGAGAGAATA+TGG | + | chr5.1:64230290-64230309 | None:intergenic | 25.0% |
| ! | TCTCTATGTTATCTTGATTT+GGG | - | chr5.1:64231639-64231658 | MS.gene56675:intron | 25.0% |
| ! | TGGTATGAAAGATTATTGTT+TGG | - | chr5.1:64228369-64228388 | MS.gene56675:CDS | 25.0% |
| ! | TTAAAAAAACAACTATGCAG+TGG | + | chr5.1:64228586-64228605 | None:intergenic | 25.0% |
| ! | TTCTCTATGTTATCTTGATT+TGG | - | chr5.1:64231638-64231657 | MS.gene56675:intron | 25.0% |
| ! | TTGCATCATGAACAAAATAA+AGG | + | chr5.1:64229587-64229606 | None:intergenic | 25.0% |
| !! | AAGCTTTTCTTATGTAACAA+AGG | + | chr5.1:64232191-64232210 | None:intergenic | 25.0% |
| !! | TATAGCTTTTGCAAAAAATG+CGG | - | chr5.1:64228770-64228789 | MS.gene56675:intron | 25.0% |
| !!! | ATCCTCATTTTTAAATAGTG+AGG | + | chr5.1:64230368-64230387 | None:intergenic | 25.0% |
| !!! | GATTATTCTTTTTTGACACA+TGG | - | chr5.1:64230862-64230881 | MS.gene56675:intron | 25.0% |
| AAAAAAACTTAGGGTGTGTT+TGG | + | chr5.1:64231359-64231378 | None:intergenic | 30.0% | |
| AAAAATATGGAGTGTATGAG+AGG | + | chr5.1:64229880-64229899 | None:intergenic | 30.0% | |
| AAAGCTCAAGAAACAAAACA+TGG | + | chr5.1:64232103-64232122 | None:intergenic | 30.0% | |
| AAATCAATTTAGTCCTCCTT+AGG | - | chr5.1:64232071-64232090 | MS.gene56675:intron | 30.0% | |
| AACACACCCAAAAAAAACTT+AGG | + | chr5.1:64231369-64231388 | None:intergenic | 30.0% | |
| AAGAGAAACTGTTATGATAC+TGG | - | chr5.1:64229640-64229659 | MS.gene56675:intron | 30.0% | |
| AATCAATTTAGTCCTCCTTA+GGG | - | chr5.1:64232072-64232091 | MS.gene56675:intron | 30.0% | |
| AATCATTCTGCTTTATGTGA+TGG | - | chr5.1:64229364-64229383 | MS.gene56675:intron | 30.0% | |
| ACACACCCAAAAAAAACTTA+GGG | + | chr5.1:64231368-64231387 | None:intergenic | 30.0% | |
| ACTATGCTGAGTAAAACTAA+AGG | + | chr5.1:64228005-64228024 | None:intergenic | 30.0% | |
| AGAAATAGCAGATAGTGTAA+TGG | + | chr5.1:64230574-64230593 | None:intergenic | 30.0% | |
| AGTAACCTTTGCTTTCTTTA+GGG | - | chr5.1:64231192-64231211 | MS.gene56675:intron | 30.0% | |
| ATAGCTATGTTTATGACTCT+AGG | - | chr5.1:64228660-64228679 | MS.gene56675:intron | 30.0% | |
| ATTATAACCAAAACGGGATT+TGG | + | chr5.1:64229205-64229224 | None:intergenic | 30.0% | |
| CAAATCAGTGACATTAAGAT+TGG | + | chr5.1:64231739-64231758 | None:intergenic | 30.0% | |
| CATATATCAACCTAAATTCC+TGG | + | chr5.1:64231095-64231114 | None:intergenic | 30.0% | |
| GAAAACTAATGATCAAATGC+TGG | - | chr5.1:64231869-64231888 | MS.gene56675:intron | 30.0% | |
| GAAATAGCAGATAGTGTAAT+GGG | + | chr5.1:64230573-64230592 | None:intergenic | 30.0% | |
| GAACATCAATAATCGATAAG+AGG | + | chr5.1:64229151-64229170 | None:intergenic | 30.0% | |
| GACATGGTAAAACACAATAT+TGG | + | chr5.1:64231680-64231699 | None:intergenic | 30.0% | |
| GCAACCTAAGGATTAATAAT+TGG | - | chr5.1:64229076-64229095 | MS.gene56675:intron | 30.0% | |
| GTATAACAAAAGTGAGCAAA+AGG | + | chr5.1:64230776-64230795 | None:intergenic | 30.0% | |
| TAAAATTCCGCTACACAATA+GGG | + | chr5.1:64228917-64228936 | None:intergenic | 30.0% | |
| TAATGACCACACCAAAAATA+TGG | + | chr5.1:64229893-64229912 | None:intergenic | 30.0% | |
| TAGATGTAGGAACTTAAGAA+TGG | - | chr5.1:64229426-64229445 | MS.gene56675:intron | 30.0% | |
| TAGCAAAATAAAACAGGACA+TGG | + | chr5.1:64231696-64231715 | None:intergenic | 30.0% | |
| TATTGAACAACACTGTCATA+TGG | + | chr5.1:64229977-64229996 | None:intergenic | 30.0% | |
| TCATACTAAATAGTGTGTTG+CGG | + | chr5.1:64228870-64228889 | None:intergenic | 30.0% | |
| TCTATGTTCAAGAGAATCAA+TGG | - | chr5.1:64228349-64228368 | MS.gene56675:CDS | 30.0% | |
| TGAATCAAAGTTTAGTATCC+AGG | - | chr5.1:64232165-64232184 | MS.gene56675:CDS | 30.0% | |
| TGAGGATAATGATTATGTTG+GGG | - | chr5.1:64230381-64230400 | MS.gene56675:intron | 30.0% | |
| TGCCTCACTATTTAAAAATG+AGG | - | chr5.1:64230363-64230382 | MS.gene56675:intron | 30.0% | |
| TGTGGCATAGTAATTTAAAG+AGG | - | chr5.1:64228739-64228758 | MS.gene56675:intron | 30.0% | |
| TTGATGTTCGTCTCAATTTA+TGG | - | chr5.1:64229162-64229181 | MS.gene56675:intron | 30.0% | |
| TTGTTAAATAGCAGGTATAG+CGG | - | chr5.1:64228799-64228818 | MS.gene56675:intron | 30.0% | |
| ! | GAGCTTTAGTTAAGTTGTTT+GGG | - | chr5.1:64232116-64232135 | MS.gene56675:intron | 30.0% |
| ! | GTTAGTCTGTTTGTTAGTTT+CGG | - | chr5.1:64231508-64231527 | MS.gene56675:intron | 30.0% |
| ! | TCTCATACACTCCATATTTT+TGG | - | chr5.1:64229879-64229898 | MS.gene56675:intron | 30.0% |
| ! | TGAGCTTTAGTTAAGTTGTT+TGG | - | chr5.1:64232115-64232134 | MS.gene56675:intron | 30.0% |
| ! | TGGGTTGAATTGTTTGAAAT+TGG | - | chr5.1:64232135-64232154 | MS.gene56675:intron | 30.0% |
| !! | TAATGTCACTGATTTGATCA+AGG | - | chr5.1:64231743-64231762 | MS.gene56675:CDS | 30.0% |
| !! | TACATTGATTCCTTTCAAGT+TGG | - | chr5.1:64230793-64230812 | MS.gene56675:CDS | 30.0% |
| !!! | AACACACCCTAAGTTTTTTT+TGG | - | chr5.1:64231359-64231378 | MS.gene56675:intron | 30.0% |
| !!! | ACACACCCTAAGTTTTTTTT+GGG | - | chr5.1:64231360-64231379 | MS.gene56675:intron | 30.0% |
| !!! | ATGTCCTGTTTTATTTTGCT+AGG | - | chr5.1:64231695-64231714 | MS.gene56675:intron | 30.0% |
| !!! | CAGTTTTGTTATTATCTCTG+TGG | + | chr5.1:64228222-64228241 | None:intergenic | 30.0% |
| !!! | CTTTTTTGACACATGGATAA+AGG | - | chr5.1:64230869-64230888 | MS.gene56675:intron | 30.0% |
| !!! | GTTTTTTTTGGGTGTGTTTA+TGG | - | chr5.1:64231371-64231390 | MS.gene56675:intron | 30.0% |
| AAAAATACACCATTAGAGGC+AGG | + | chr5.1:64230828-64230847 | None:intergenic | 35.0% | |
| AAAAGCTTACTATGCTGTTG+AGG | - | chr5.1:64229258-64229277 | MS.gene56675:CDS | 35.0% | |
| ACATTTGCTTAGAGATGTGA+AGG | - | chr5.1:64230718-64230737 | MS.gene56675:intron | 35.0% | |
| ACGTCCTAGCAAAATAAAAC+AGG | + | chr5.1:64231702-64231721 | None:intergenic | 35.0% | |
| ATACAGGATCTCATGGTTTA+AGG | + | chr5.1:64231010-64231029 | None:intergenic | 35.0% | |
| ATACATATAGGAAAGGAGTG+GGG | + | chr5.1:64229798-64229817 | None:intergenic | 35.0% | |
| CATACATATAGGAAAGGAGT+GGG | + | chr5.1:64229799-64229818 | None:intergenic | 35.0% | |
| CTAAAATTCCGCTACACAAT+AGG | + | chr5.1:64228918-64228937 | None:intergenic | 35.0% | |
| CTGCTATGCTATTACATATC+AGG | - | chr5.1:64230009-64230028 | MS.gene56675:intron | 35.0% | |
| CTTTGCTCTGTAGATAGTTT+GGG | + | chr5.1:64229711-64229730 | None:intergenic | 35.0% | |
| GAAATAGGTATGTCATGGAA+TGG | - | chr5.1:64229534-64229553 | MS.gene56675:CDS | 35.0% | |
| GACAACAAAACCAACTTGAA+AGG | + | chr5.1:64230806-64230825 | None:intergenic | 35.0% | |
| GACAATCTCGTTTGTCATAT+AGG | - | chr5.1:64230894-64230913 | MS.gene56675:intron | 35.0% | |
| GAGTAACCTTTGCTTTCTTT+AGG | - | chr5.1:64231191-64231210 | MS.gene56675:intron | 35.0% | |
| GATGTTGAACCTAAAGAGTT+GGG | - | chr5.1:64229226-64229245 | MS.gene56675:intron | 35.0% | |
| GCTCAACAAAGAACATGAAA+GGG | - | chr5.1:64232280-64232299 | MS.gene56675:CDS | 35.0% | |
| GTTTATGGTAAAAAGCTCTG+TGG | - | chr5.1:64231386-64231405 | MS.gene56675:intron | 35.0% | |
| TAATGATTATGTTGGGGAAG+AGG | - | chr5.1:64230387-64230406 | MS.gene56675:intron | 35.0% | |
| TAATTATACCGAGTGTAGCT+TGG | - | chr5.1:64228690-64228709 | MS.gene56675:intron | 35.0% | |
| TACAGGATCTCATGGTTTAA+GGG | + | chr5.1:64231009-64231028 | None:intergenic | 35.0% | |
| TCCTTGTCATCTTCTTCAAA+CGG | + | chr5.1:64228283-64228302 | None:intergenic | 35.0% | |
| TCTAAATTTGGCTATGCTAG+AGG | + | chr5.1:64228832-64228851 | None:intergenic | 35.0% | |
| TGAAGAGAGAATATGGAGAT+TGG | + | chr5.1:64230283-64230302 | None:intergenic | 35.0% | |
| TGAGGATTCATTGAAGTTGA+AGG | - | chr5.1:64230337-64230356 | MS.gene56675:intron | 35.0% | |
| TGATCAAGAAACCAAATGCT+AGG | + | chr5.1:64228307-64228326 | None:intergenic | 35.0% | |
| TGATGTTGAACCTAAAGAGT+TGG | - | chr5.1:64229225-64229244 | MS.gene56675:intron | 35.0% | |
| TGCTCAACAAAGAACATGAA+AGG | - | chr5.1:64232279-64232298 | MS.gene56675:CDS | 35.0% | |
| TTAGTGATGAGAGTTTACCT+AGG | + | chr5.1:64230245-64230264 | None:intergenic | 35.0% | |
| TTGAGGAAATAGGTATGTCA+TGG | - | chr5.1:64229529-64229548 | MS.gene56675:CDS | 35.0% | |
| TTTCTTATGTAACAAAGGCC+TGG | + | chr5.1:64232186-64232205 | None:intergenic | 35.0% | |
| TTTGGTTGTAGGGTTTAGAA+GGG | - | chr5.1:64231219-64231238 | MS.gene56675:intron | 35.0% | |
| ! | ACAGCATAGTAAGCTTTTGT+AGG | + | chr5.1:64229256-64229275 | None:intergenic | 35.0% |
| ! | AGATCATTTTCTCGCAGTTT+CGG | + | chr5.1:64228518-64228537 | None:intergenic | 35.0% |
| ! | ATTCTGCTTTATGTGATGGA+AGG | - | chr5.1:64229368-64229387 | MS.gene56675:intron | 35.0% |
| ! | GTTATTGTTGTCTGCTGATT+TGG | - | chr5.1:64231990-64232009 | MS.gene56675:CDS | 35.0% |
| ! | TGACAGTGTTGTTCAATAAC+CGG | - | chr5.1:64229979-64229998 | MS.gene56675:intron | 35.0% |
| !! | ATAGTGTAATGGGCAAATAG+TGG | + | chr5.1:64230563-64230582 | None:intergenic | 35.0% |
| !!! | TACACTCCATATTTTTGGTG+TGG | - | chr5.1:64229884-64229903 | MS.gene56675:intron | 35.0% |
| AACAACACTGTCATATGGAC+AGG | + | chr5.1:64229972-64229991 | None:intergenic | 40.0% | |
| AACCAACCTGCAAATGATAC+AGG | + | chr5.1:64231026-64231045 | None:intergenic | 40.0% | |
| AATTGCTGCTCATGAAGTTG+AGG | - | chr5.1:64229512-64229531 | MS.gene56675:intron | 40.0% | |
| ACACACCCTAAAGAAAGCAA+AGG | + | chr5.1:64231200-64231219 | None:intergenic | 40.0% | |
| ACCAAATGGTCCAGGAATTT+AGG | - | chr5.1:64231082-64231101 | MS.gene56675:intron | 40.0% | |
| ACCTAAATTCCTGGACCATT+TGG | + | chr5.1:64231086-64231105 | None:intergenic | 40.0% | |
| ACTACCACTTCAATAGAGGT+GGG | - | chr5.1:64230076-64230095 | MS.gene56675:intron | 40.0% | |
| AGGTTGCGAGAAAATGTCAT+GGG | + | chr5.1:64229063-64229082 | None:intergenic | 40.0% | |
| ATATGACTATGCCACATCAG+AGG | + | chr5.1:64229017-64229036 | None:intergenic | 40.0% | |
| ATCCTGTATCATTTGCAGGT+TGG | - | chr5.1:64231021-64231040 | MS.gene56675:CDS | 40.0% | |
| ATGACAAGGATCCTAGCATT+TGG | - | chr5.1:64228293-64228312 | MS.gene56675:intron | 40.0% | |
| ATTGAGGGTTTAGGAGAAGA+AGG | + | chr5.1:64231336-64231355 | None:intergenic | 40.0% | |
| CAAAACATGGTAAAGCCCTA+AGG | + | chr5.1:64232090-64232109 | None:intergenic | 40.0% | |
| CACTTCTAATGAGAGACGAT+AGG | + | chr5.1:64231902-64231921 | None:intergenic | 40.0% | |
| CAGAATCAATGACGTGTAAG+AGG | + | chr5.1:64230319-64230338 | None:intergenic | 40.0% | |
| CATGAGCAGCAATTTCTGAT+TGG | + | chr5.1:64229506-64229525 | None:intergenic | 40.0% | |
| CCACTCCTTTCCTATATGTA+TGG | - | chr5.1:64229797-64229816 | MS.gene56675:intron | 40.0% | |
| CCATACATATAGGAAAGGAG+TGG | + | chr5.1:64229800-64229819 | None:intergenic | 40.0% | |
| CTATGAACCTATTGATGCTC+TGG | - | chr5.1:64231054-64231073 | MS.gene56675:CDS | 40.0% | |
| CTTCTTGGTTCCTCTTTCAA+AGG | - | chr5.1:64228077-64228096 | MS.gene56675:intron | 40.0% | |
| GAAGCTTTCCATCAATGACA+AGG | + | chr5.1:64230987-64231006 | None:intergenic | 40.0% | |
| GCAAATGATACAGGATCTCA+TGG | + | chr5.1:64231017-64231036 | None:intergenic | 40.0% | |
| GCAATTAGGAGCTTATGCTA+CGG | - | chr5.1:64228622-64228641 | MS.gene56675:intron | 40.0% | |
| GCTCATGAAGTTGAGGAAAT+AGG | - | chr5.1:64229519-64229538 | MS.gene56675:intron | 40.0% | |
| GCTTTGCTCTGTAGATAGTT+TGG | + | chr5.1:64229712-64229731 | None:intergenic | 40.0% | |
| GTAGGAATTCCCAACTCTTT+AGG | + | chr5.1:64229238-64229257 | None:intergenic | 40.0% | |
| GTGTGCCATACATATAGGAA+AGG | + | chr5.1:64229805-64229824 | None:intergenic | 40.0% | |
| GTTTGGTTGTAGGGTTTAGA+AGG | - | chr5.1:64231218-64231237 | MS.gene56675:intron | 40.0% | |
| TACATATAGGAAAGGAGTGG+GGG | + | chr5.1:64229797-64229816 | None:intergenic | 40.0% | |
| TACCTTGACCTTGTCATTGA+TGG | - | chr5.1:64230976-64230995 | MS.gene56675:intron | 40.0% | |
| TAGGTTGCGAGAAAATGTCA+TGG | + | chr5.1:64229064-64229083 | None:intergenic | 40.0% | |
| TATTCTTCTTTCCCTTGTGC+AGG | - | chr5.1:64230689-64230708 | MS.gene56675:intron | 40.0% | |
| TCTCATCACTAAACTGCCTT+GGG | - | chr5.1:64230253-64230272 | MS.gene56675:intron | 40.0% | |
| TGAGATCCTGTATCATTTGC+AGG | - | chr5.1:64231017-64231036 | MS.gene56675:CDS | 40.0% | |
| TGGGTTTGGCAAAATTACTG+TGG | - | chr5.1:64228721-64228740 | MS.gene56675:intron | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr5.1:64231345-64231364 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr5.1:64231351-64231370 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGTTGTA+GGG | - | chr5.1:64231209-64231228 | MS.gene56675:intron | 40.0% | |
| TTCAATAGAGGTGGGCATAT+TGG | - | chr5.1:64230084-64230103 | MS.gene56675:intron | 40.0% | |
| TTCCACTACCACTTCAATAG+AGG | - | chr5.1:64230072-64230091 | MS.gene56675:intron | 40.0% | |
| TTCCATCAATGACAAGGTCA+AGG | + | chr5.1:64230981-64231000 | None:intergenic | 40.0% | |
| TTGAGGGTTTAGGAGAAGAA+GGG | + | chr5.1:64231335-64231354 | None:intergenic | 40.0% | |
| TTGGTTGTAGGGTTTAGAAG+GGG | - | chr5.1:64231220-64231239 | MS.gene56675:intron | 40.0% | |
| TTTGTAGCCCTATTGTGTAG+CGG | - | chr5.1:64228907-64228926 | MS.gene56675:intron | 40.0% | |
| ! | CTATGTTCCAAATCCCGTTT+TGG | - | chr5.1:64229195-64229214 | MS.gene56675:intron | 40.0% |
| ! | GATTTGATCAAGGCTTTTGC+AGG | - | chr5.1:64231753-64231772 | MS.gene56675:CDS | 40.0% |
| ! | GCACTGACACTTCTGATTAA+AGG | + | chr5.1:64228200-64228219 | None:intergenic | 40.0% |
| ! | GGTCAGTGTTGTTAAATAGC+AGG | - | chr5.1:64228791-64228810 | MS.gene56675:intron | 40.0% |
| ! | GTTAGTTTCGGCTTAAGCTT+GGG | - | chr5.1:64231520-64231539 | MS.gene56675:intron | 40.0% |
| ! | TGACATTTTCTCGCAACCTA+AGG | - | chr5.1:64229064-64229083 | MS.gene56675:intron | 40.0% |
| ! | TGTTAGTTTCGGCTTAAGCT+TGG | - | chr5.1:64231519-64231538 | MS.gene56675:intron | 40.0% |
| ! | TTACCTAGGTCGTAGGTTTT+AGG | + | chr5.1:64230231-64230250 | None:intergenic | 40.0% |
| ! | TTTAGGGTGTGTTTGGTTGT+AGG | - | chr5.1:64231208-64231227 | MS.gene56675:intron | 40.0% |
| !! | ACTTTGGATTGGCCGAATTA+CGG | + | chr5.1:64228993-64229012 | None:intergenic | 40.0% |
| !! | CTTACACGTCATTGATTCTG+AGG | - | chr5.1:64230319-64230338 | MS.gene56675:intron | 40.0% |
| !! | TGCTTTCTTTAGGGTGTGTT+TGG | - | chr5.1:64231201-64231220 | MS.gene56675:intron | 40.0% |
| !! | TTGGCGATCAGCTATTTTCT+GGG | - | chr5.1:64230606-64230625 | MS.gene56675:intron | 40.0% |
| !! | TTTGGCGATCAGCTATTTTC+TGG | - | chr5.1:64230605-64230624 | MS.gene56675:intron | 40.0% |
| !! | TTTTGTTGTCCTGCCTCTAA+TGG | - | chr5.1:64230816-64230835 | MS.gene56675:intron | 40.0% |
| AAAGCTCTGTGGATAGTCAG+AGG | - | chr5.1:64231397-64231416 | MS.gene56675:intron | 45.0% | |
| AAATGTTCCACTCCTGCACA+AGG | + | chr5.1:64230704-64230723 | None:intergenic | 45.0% | |
| AACATGGTAAAGCCCTAAGG+AGG | + | chr5.1:64232087-64232106 | None:intergenic | 45.0% | |
| AATGTTCCACTCCTGCACAA+GGG | + | chr5.1:64230703-64230722 | None:intergenic | 45.0% | |
| ACTCCTAAAACCTACGACCT+AGG | - | chr5.1:64230225-64230244 | MS.gene56675:intron | 45.0% | |
| AGCTTACTATGCTGTTGAGG+AGG | - | chr5.1:64229261-64229280 | MS.gene56675:CDS | 45.0% | |
| AGGGAACGCAATTGTCTGTT+AGG | + | chr5.1:64229759-64229778 | None:intergenic | 45.0% | |
| ATACCGAGTGTAGCTTGGTT+GGG | - | chr5.1:64228695-64228714 | MS.gene56675:intron | 45.0% | |
| ATAGCATAGCAGCGCTATAC+CGG | + | chr5.1:64230001-64230020 | None:intergenic | 45.0% | |
| ATGCTGAGTCGGTGATTAGA+TGG | - | chr5.1:64230191-64230210 | MS.gene56675:intron | 45.0% | |
| CAAAGCTCCTCGGAGAAATT+TGG | + | chr5.1:64231557-64231576 | None:intergenic | 45.0% | |
| CACCTCTATTGAAGTGGTAG+TGG | + | chr5.1:64230077-64230096 | None:intergenic | 45.0% | |
| CACTACCACTTCAATAGAGG+TGG | - | chr5.1:64230075-64230094 | MS.gene56675:intron | 45.0% | |
| CTCTCATCACTAAACTGCCT+TGG | - | chr5.1:64230252-64230271 | MS.gene56675:intron | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr5.1:64231352-64231371 | None:intergenic | 45.0% | |
| GCAAAACTCACAGCCTTGAA+GGG | - | chr5.1:64230922-64230941 | MS.gene56675:intron | 45.0% | |
| GCCGTTTGAAGAAGATGACA+AGG | - | chr5.1:64228279-64228298 | MS.gene56675:intron | 45.0% | |
| GTAAACGAGGTGTGTGAGAA+GGG | - | chr5.1:64231475-64231494 | MS.gene56675:intron | 45.0% | |
| GTGGTGTGTGCCATACATAT+AGG | + | chr5.1:64229810-64229829 | None:intergenic | 45.0% | |
| GTGTGAGAAGGGAAATGAGA+TGG | - | chr5.1:64231486-64231505 | MS.gene56675:intron | 45.0% | |
| GTTGAGGAGGTTAAAGAGGT+GGG | - | chr5.1:64229274-64229293 | MS.gene56675:CDS | 45.0% | |
| TATACCGAGTGTAGCTTGGT+TGG | - | chr5.1:64228694-64228713 | MS.gene56675:intron | 45.0% | |
| TATGCCCACCTCTATTGAAG+TGG | + | chr5.1:64230083-64230102 | None:intergenic | 45.0% | |
| TCACAGAGAATATGCTTCCC+TGG | - | chr5.1:64229733-64229752 | MS.gene56675:intron | 45.0% | |
| TCGCGGAAAGTGGAAAATAG+CGG | + | chr5.1:64228945-64228964 | None:intergenic | 45.0% | |
| TCTTGCATCCAAACCCTTCA+AGG | + | chr5.1:64230938-64230957 | None:intergenic | 45.0% | |
| TGAACCTATTGATGCTCTGG+CGG | - | chr5.1:64231057-64231076 | MS.gene56675:CDS | 45.0% | |
| TGACATTAAGATTGGGCAGC+AGG | + | chr5.1:64231731-64231750 | None:intergenic | 45.0% | |
| TGAGAGTTTACCTAGGTCGT+AGG | + | chr5.1:64230238-64230257 | None:intergenic | 45.0% | |
| TGCAAAACTCACAGCCTTGA+AGG | - | chr5.1:64230921-64230940 | MS.gene56675:intron | 45.0% | |
| TGCCACTCAGAAGAGTCAAA+AGG | - | chr5.1:64229467-64229486 | MS.gene56675:intron | 45.0% | |
| TGCCATTGCTCACCGTAATT+CGG | - | chr5.1:64228978-64228997 | MS.gene56675:intron | 45.0% | |
| TGCTGAGTCGGTGATTAGAT+GGG | - | chr5.1:64230192-64230211 | MS.gene56675:intron | 45.0% | |
| TGCTGTTGAGGAGGTTAAAG+AGG | - | chr5.1:64229270-64229289 | MS.gene56675:CDS | 45.0% | |
| TGGTTGTAGGGTTTAGAAGG+GGG | - | chr5.1:64231221-64231240 | MS.gene56675:intron | 45.0% | |
| TGTTGAGGAGGTTAAAGAGG+TGG | - | chr5.1:64229273-64229292 | MS.gene56675:CDS | 45.0% | |
| ! | AATCCAAAGTGCCTCTGATG+TGG | - | chr5.1:64229003-64229022 | MS.gene56675:intron | 45.0% |
| ! | GTAGCTAAGGAGCATGTTGT+GGG | - | chr5.1:64228476-64228495 | MS.gene56675:intron | 45.0% |
| ! | TAGCTAAGGAGCATGTTGTG+GGG | - | chr5.1:64228477-64228496 | MS.gene56675:intron | 45.0% |
| ! | TGTAGCTAAGGAGCATGTTG+TGG | - | chr5.1:64228475-64228494 | MS.gene56675:intron | 45.0% |
| !! | AAAAGGCACCTCTGTTGCAA+GGG | + | chr5.1:64230759-64230778 | None:intergenic | 45.0% |
| !! | ACATCAGAGGCACTTTGGAT+TGG | + | chr5.1:64229004-64229023 | None:intergenic | 45.0% |
| !! | AGCTAGCAAGTTGGTTAGAG+GGG | - | chr5.1:64231422-64231441 | MS.gene56675:intron | 45.0% |
| !! | GACCTTTTGACTCTTCTGAG+TGG | + | chr5.1:64229472-64229491 | None:intergenic | 45.0% |
| !! | GAGCTAGCAAGTTGGTTAGA+GGG | - | chr5.1:64231421-64231440 | MS.gene56675:intron | 45.0% |
| !! | GAGCTTTGTTCTGGGGTTAT+TGG | - | chr5.1:64231569-64231588 | MS.gene56675:intron | 45.0% |
| !! | GTAGCTGTTGGTGATATCGA+CGG | + | chr5.1:64228105-64228124 | None:intergenic | 45.0% |
| !! | GTGTAATGGGCAAATAGTGG+AGG | + | chr5.1:64230560-64230579 | None:intergenic | 45.0% |
| !! | TAGCGTATCGACTTTCGTTG+CGG | + | chr5.1:64230046-64230065 | None:intergenic | 45.0% |
| !! | TGAGCTAGCAAGTTGGTTAG+AGG | - | chr5.1:64231420-64231439 | MS.gene56675:intron | 45.0% |
| AACCCCAGAACAAAGCTCCT+CGG | + | chr5.1:64231567-64231586 | None:intergenic | 50.0% | |
| ACGCAATTGTCTGTTAGGCC+AGG | + | chr5.1:64229754-64229773 | None:intergenic | 50.0% | |
| ACTCACAGCCTTGAAGGGTT+TGG | - | chr5.1:64230927-64230946 | MS.gene56675:intron | 50.0% | |
| ACTGTGTCAATCGCGGAAAG+TGG | + | chr5.1:64228955-64228974 | None:intergenic | 50.0% | |
| AGACAATTGCGTTCCCTTCC+TGG | - | chr5.1:64229762-64229781 | MS.gene56675:intron | 50.0% | |
| AGGGTTTAGGAGAAGAAGGG+AGG | + | chr5.1:64231332-64231351 | None:intergenic | 50.0% | |
| ATGCTCTGGCGGTTACCAAA+TGG | - | chr5.1:64231068-64231087 | MS.gene56675:CDS | 50.0% | |
| CATTAGCACCCTTGCAACAG+AGG | - | chr5.1:64230748-64230767 | MS.gene56675:intron | 50.0% | |
| CGCAATTGTCTGTTAGGCCA+GGG | + | chr5.1:64229753-64229772 | None:intergenic | 50.0% | |
| CTCCAGAAAGAATGGTGAGG+TGG | + | chr5.1:64229855-64229874 | None:intergenic | 50.0% | |
| CTTCCTGCTGTACTTGGTAC+AGG | + | chr5.1:64232326-64232345 | None:intergenic | 50.0% | |
| GAGAGGAGCTCCAGAAAGAA+TGG | + | chr5.1:64229863-64229882 | None:intergenic | 50.0% | |
| GAGCTCCAGAAAGAATGGTG+AGG | + | chr5.1:64229858-64229877 | None:intergenic | 50.0% | |
| GATATCACCAACAGCTACGC+CGG | - | chr5.1:64228107-64228126 | MS.gene56675:intron | 50.0% | |
| GCTGAGTCGGTGATTAGATG+GGG | - | chr5.1:64230193-64230212 | MS.gene56675:intron | 50.0% | |
| GGGAATGCCAAATTTCTCCG+AGG | - | chr5.1:64231547-64231566 | MS.gene56675:intron | 50.0% | |
| GGGTTTAGGAGAAGAAGGGA+GGG | + | chr5.1:64231331-64231350 | None:intergenic | 50.0% | |
| GGTAAACGAGGTGTGTGAGA+AGG | - | chr5.1:64231474-64231493 | MS.gene56675:intron | 50.0% | |
| GGTTTAGGAGAAGAAGGGAG+GGG | + | chr5.1:64231330-64231349 | None:intergenic | 50.0% | |
| GTTGTGGGGTGGTATAGTAC+TGG | - | chr5.1:64228491-64228510 | MS.gene56675:intron | 50.0% | |
| TCAGAGGTGAGCTAGCAAGT+TGG | - | chr5.1:64231413-64231432 | MS.gene56675:intron | 50.0% | |
| TGCCACCTCACCATTCTTTC+TGG | - | chr5.1:64229850-64229869 | MS.gene56675:intron | 50.0% | |
| TTCTTTCCCTTGTGCAGGAG+TGG | - | chr5.1:64230694-64230713 | MS.gene56675:intron | 50.0% | |
| TTGTAGGGTTTAGAAGGGGG+AGG | - | chr5.1:64231224-64231243 | MS.gene56675:intron | 50.0% | |
| ! | AATTGTACCGGCGTAGCTGT+TGG | + | chr5.1:64228117-64228136 | None:intergenic | 50.0% |
| ! | ATCGACGGTGCCTTTGAAAG+AGG | + | chr5.1:64228090-64228109 | None:intergenic | 50.0% |
| ! | GTAACCGCCAGAGCATCAAT+AGG | + | chr5.1:64231064-64231083 | None:intergenic | 50.0% |
| ! | TATGGAGATTGGAGTGCCCA+AGG | + | chr5.1:64230272-64230291 | None:intergenic | 50.0% |
| !! | ATGCCACATCAGAGGCACTT+TGG | + | chr5.1:64229009-64229028 | None:intergenic | 50.0% |
| !! | CAAAAGGCACCTCTGTTGCA+AGG | + | chr5.1:64230760-64230779 | None:intergenic | 50.0% |
| !! | CTCTGTTGCAAGGGTGCTAA+TGG | + | chr5.1:64230750-64230769 | None:intergenic | 50.0% |
| !! | GCTAGCAAGTTGGTTAGAGG+GGG | - | chr5.1:64231423-64231442 | MS.gene56675:intron | 50.0% |
| !! | TCTCCGAGGAGCTTTGTTCT+GGG | - | chr5.1:64231561-64231580 | MS.gene56675:intron | 50.0% |
| !! | TTCTCCGAGGAGCTTTGTTC+TGG | - | chr5.1:64231560-64231579 | MS.gene56675:intron | 50.0% |
| AGAGAGGGAACACGTGGAGT+CGG | - | chr5.1:64231448-64231467 | MS.gene56675:intron | 55.0% | |
| AGTGTAGCTTGGTTGGGTGG+TGG | - | chr5.1:64228701-64228720 | MS.gene56675:intron | 55.0% | |
| CCACCCAACCAAGCTACACT+CGG | + | chr5.1:64228701-64228720 | None:intergenic | 55.0% | |
| CGCGTCGTTGGAGTTCTTCT+TGG | - | chr5.1:64228062-64228081 | MS.gene56675:intron | 55.0% | |
| GAAAGGAGTGGGGGAGTTAG+TGG | + | chr5.1:64229788-64229807 | None:intergenic | 55.0% | |
| GACGCGTTTGCGAGTGTCTT+TGG | + | chr5.1:64228048-64228067 | None:intergenic | 55.0% | |
| GGCACTCACTGTGTCAATCG+CGG | + | chr5.1:64228962-64228981 | None:intergenic | 55.0% | |
| GGCCGAATTACGGTGAGCAA+TGG | + | chr5.1:64228983-64229002 | None:intergenic | 55.0% | |
| GGTGGGCATATTGGCGATAG+CGG | - | chr5.1:64230093-64230112 | MS.gene56675:intron | 55.0% | |
| GTGCCTGTACCAAGTACAGC+AGG | - | chr5.1:64232320-64232339 | MS.gene56675:CDS | 55.0% | |
| GTGTAGCTTGGTTGGGTGGT+GGG | - | chr5.1:64228702-64228721 | MS.gene56675:intron | 55.0% | |
| GTTTAGAAGGGGGAGGAGGA+GGG | - | chr5.1:64231231-64231250 | MS.gene56675:intron | 55.0% | |
| TAGGAGAAGAAGGGAGGGGA+GGG | + | chr5.1:64231326-64231345 | None:intergenic | 55.0% | |
| TAGGGTTTAGAAGGGGGAGG+AGG | - | chr5.1:64231227-64231246 | MS.gene56675:intron | 55.0% | |
| TCGGCTTAAGCTTGGGCAGA+GGG | - | chr5.1:64231527-64231546 | MS.gene56675:intron | 55.0% | |
| TGGCGGTTACCAAATGGTCC+AGG | - | chr5.1:64231074-64231093 | MS.gene56675:CDS | 55.0% | |
| TGGTTAGAGGGGGAGAGAGA+GGG | - | chr5.1:64231433-64231452 | MS.gene56675:intron | 55.0% | |
| TTAGGAGAAGAAGGGAGGGG+AGG | + | chr5.1:64231327-64231346 | None:intergenic | 55.0% | |
| TTCGGCTTAAGCTTGGGCAG+AGG | - | chr5.1:64231526-64231545 | MS.gene56675:intron | 55.0% | |
| TTGGTTAGAGGGGGAGAGAG+AGG | - | chr5.1:64231432-64231451 | MS.gene56675:intron | 55.0% | |
| TTTAGAAGGGGGAGGAGGAG+GGG | - | chr5.1:64231232-64231251 | MS.gene56675:intron | 55.0% | |
| ! | CTAAGGAGCATGTTGTGGGG+TGG | - | chr5.1:64228480-64228499 | MS.gene56675:intron | 55.0% |
| !! | CTCCGAGGAGCTTTGTTCTG+GGG | - | chr5.1:64231562-64231581 | MS.gene56675:intron | 55.0% |
| CCGAGTGTAGCTTGGTTGGG+TGG | - | chr5.1:64228698-64228717 | MS.gene56675:intron | 60.0% | |
| GACACTCGCAAACGCGTCGT+TGG | - | chr5.1:64228050-64228069 | MS.gene56675:intron | 60.0% | |
| GAGAGGGAACACGTGGAGTC+GGG | - | chr5.1:64231449-64231468 | MS.gene56675:intron | 60.0% | |
| GGGGAGTTAGTGGCCAGGAA+GGG | + | chr5.1:64229778-64229797 | None:intergenic | 60.0% | |
| GGTTTAGAAGGGGGAGGAGG+AGG | - | chr5.1:64231230-64231249 | MS.gene56675:intron | 60.0% | |
| TGGAGTCGGGAGGGTAAACG+AGG | - | chr5.1:64231462-64231481 | MS.gene56675:intron | 60.0% | |
| TTAGAAGGGGGAGGAGGAGG+GGG | - | chr5.1:64231233-64231252 | MS.gene56675:intron | 60.0% | |
| !! | GCTTGGTTGGGTGGTGGGTT+TGG | - | chr5.1:64228707-64228726 | MS.gene56675:intron | 60.0% |
| AGGGAACACGTGGAGTCGGG+AGG | - | chr5.1:64231452-64231471 | MS.gene56675:intron | 65.0% | |
| GAGTGGGGGAGTTAGTGGCC+AGG | + | chr5.1:64229783-64229802 | None:intergenic | 65.0% | |
| GGGAACACGTGGAGTCGGGA+GGG | - | chr5.1:64231453-64231472 | MS.gene56675:intron | 65.0% | |
| GGGGAGAGAGAGGGAACACG+TGG | - | chr5.1:64231442-64231461 | MS.gene56675:intron | 65.0% | |
| GGGGGAGTTAGTGGCCAGGA+AGG | + | chr5.1:64229779-64229798 | None:intergenic | 65.0% | |
| TAGAAGGGGGAGGAGGAGGG+GGG | - | chr5.1:64231234-64231253 | MS.gene56675:intron | 65.0% | |
| AGAAGGGGGAGGAGGAGGGG+GGG | - | chr5.1:64231235-64231254 | MS.gene56675:intron | 70.0% | |
| AAGGGGGAGGAGGAGGGGGG+GGG | - | chr5.1:64231237-64231256 | MS.gene56675:intron | 75.0% | |
| GAAGGGGGAGGAGGAGGGGG+GGG | - | chr5.1:64231236-64231255 | MS.gene56675:intron | 75.0% | |
| ! | AGGGGGAGGAGGAGGGGGGG+GGG | - | chr5.1:64231238-64231257 | MS.gene56675:intron | 80.0% |
| ! | AGGAGGAGGGGGGGGGGGGG+GGG | - | chr5.1:64231244-64231263 | MS.gene56675:intron | 85.0% |
| ! | GAGGAGGAGGGGGGGGGGGG+GGG | - | chr5.1:64231243-64231262 | MS.gene56675:intron | 85.0% |
| ! | GGAGGAGGAGGGGGGGGGGG+GGG | - | chr5.1:64231242-64231261 | MS.gene56675:intron | 85.0% |
| ! | GGGAGGAGGAGGGGGGGGGG+GGG | - | chr5.1:64231241-64231260 | MS.gene56675:intron | 85.0% |
| ! | GGGGAGGAGGAGGGGGGGGG+GGG | - | chr5.1:64231240-64231259 | MS.gene56675:intron | 85.0% |
| ! | GGGGGAGGAGGAGGGGGGGG+GGG | - | chr5.1:64231239-64231258 | MS.gene56675:intron | 85.0% |
| ! | AGGAGGGGGGGGGGGGGGGG+GGG | - | chr5.1:64231247-64231266 | MS.gene56675:intron | 90.0% |
| ! | GAGGAGGGGGGGGGGGGGGG+GGG | - | chr5.1:64231246-64231265 | MS.gene56675:intron | 90.0% |
| ! | GGAGGAGGGGGGGGGGGGGG+GGG | - | chr5.1:64231245-64231264 | MS.gene56675:intron | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:64231250-64231269 | MS.gene56675:intron | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:64231249-64231268 | MS.gene56675:intron | 95.0% |
| ! | GGAGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:64231248-64231267 | MS.gene56675:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 64227942 | 64232349 | 64227942 | ID=MS.gene56675 |
| chr5.1 | mRNA | 64227942 | 64232349 | 64227942 | ID=MS.gene56675.t1;Parent=MS.gene56675 |
| chr5.1 | exon | 64232163 | 64232349 | 64232163 | ID=MS.gene56675.t1.exon1;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64232163 | 64232349 | 64232163 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64231921 | 64232013 | 64231921 | ID=MS.gene56675.t1.exon2;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64231921 | 64232013 | 64231921 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64231730 | 64231811 | 64231730 | ID=MS.gene56675.t1.exon3;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64231730 | 64231811 | 64231730 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64231000 | 64231096 | 64231000 | ID=MS.gene56675.t1.exon4;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64231000 | 64231096 | 64231000 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64230751 | 64230826 | 64230751 | ID=MS.gene56675.t1.exon5;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64230751 | 64230826 | 64230751 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64229522 | 64229580 | 64229522 | ID=MS.gene56675.t1.exon6;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64229522 | 64229580 | 64229522 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64229253 | 64229375 | 64229253 | ID=MS.gene56675.t1.exon7;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64229253 | 64229375 | 64229253 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64228517 | 64228574 | 64228517 | ID=MS.gene56675.t1.exon8;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64228517 | 64228574 | 64228517 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64228338 | 64228423 | 64228338 | ID=MS.gene56675.t1.exon9;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64228338 | 64228423 | 64228338 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| chr5.1 | exon | 64227942 | 64228013 | 64227942 | ID=MS.gene56675.t1.exon10;Parent=MS.gene56675.t1 |
| chr5.1 | CDS | 64227942 | 64228013 | 64227942 | ID=cds.MS.gene56675.t1;Parent=MS.gene56675.t1 |
| Gene Sequence |
| Protein sequence |
