Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80790.t1 | XP_003616580.1 | 100 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 1.50E-168 | 602.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80790.t1 | O24412 | 89.9 | 308 | 31 | 0 | 1 | 308 | 1 | 308 | 1.8e-154 | 546.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80790.t1 | B7FLW2 | 100.0 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 1.1e-168 | 602.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80790.t1 | MTR_5g081980 | 100.000 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 0.0 | 629 |
| MS.gene80790.t1 | MTR_3g070180 | 94.822 | 309 | 16 | 0 | 1 | 309 | 1 | 309 | 0.0 | 598 |
| MS.gene80790.t1 | MTR_3g070190 | 32.841 | 271 | 165 | 6 | 19 | 285 | 25 | 282 | 6.31e-35 | 128 |
| MS.gene80790.t1 | MTR_5g082000 | 31.365 | 271 | 169 | 6 | 19 | 285 | 21 | 278 | 2.82e-31 | 119 |
| MS.gene80790.t1 | MTR_3g009270 | 26.014 | 296 | 181 | 6 | 19 | 285 | 13 | 299 | 2.58e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80790.t1 | AT5G05780 | 89.935 | 308 | 31 | 0 | 1 | 308 | 1 | 308 | 0.0 | 571 |
| MS.gene80790.t1 | AT3G11270 | 89.508 | 305 | 32 | 0 | 1 | 305 | 1 | 305 | 0.0 | 563 |
| MS.gene80790.t1 | AT5G05780 | 88.961 | 308 | 31 | 1 | 1 | 308 | 1 | 305 | 0.0 | 560 |
| MS.gene80790.t1 | AT3G11270 | 88.525 | 305 | 32 | 1 | 1 | 305 | 1 | 302 | 0.0 | 551 |
| MS.gene80790.t1 | AT2G39990 | 29.487 | 234 | 148 | 6 | 19 | 248 | 30 | 250 | 3.87e-25 | 102 |
| MS.gene80790.t1 | AT4G26430 | 25.081 | 307 | 191 | 7 | 19 | 295 | 13 | 310 | 7.49e-23 | 96.7 |
| MS.gene80790.t1 | AT5G56280 | 24.262 | 305 | 192 | 7 | 19 | 295 | 13 | 306 | 6.81e-22 | 94.4 |
Find 63 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACAGGATCTCATGGTTTA+AGG | 0.226556 | 5.3:+66363660 | None:intergenic |
| CGCGTCGTTGGAGTTCTTCT+TGG | 0.238114 | 5.3:-66366648 | MS.gene80790:CDS |
| ATTATAACCAAAACGGGATT+TGG | 0.243791 | 5.3:+66365511 | None:intergenic |
| GTAGGAATTCCCAACTCTTT+AGG | 0.247111 | 5.3:+66365478 | None:intergenic |
| TACCTTGACCTTGTCATTGA+TGG | 0.274529 | 5.3:-66363691 | MS.gene80790:CDS |
| GACGCGTTTGCGAGTGTCTT+TGG | 0.305618 | 5.3:+66366665 | None:intergenic |
| CTCTGTTGCAAGGGTGCTAA+TGG | 0.335329 | 5.3:+66363920 | None:intergenic |
| GCTCATGAAGTTGAGGAAAT+AGG | 0.335482 | 5.3:-66365194 | MS.gene80790:intron |
| TGAGATCCTGTATCATTTGC+AGG | 0.345264 | 5.3:-66363650 | MS.gene80790:intron |
| CTATGTTCCAAATCCCGTTT+TGG | 0.360839 | 5.3:-66365518 | MS.gene80790:CDS |
| CAAATCAGTGACATTAAGAT+TGG | 0.377033 | 5.3:+66362934 | None:intergenic |
| ACATCAATTATAACCAAAAC+GGG | 0.396892 | 5.3:+66365505 | None:intergenic |
| ACTCACAGCCTTGAAGGGTT+TGG | 0.398386 | 5.3:-66363740 | MS.gene80790:CDS |
| TCTTGCATCCAAACCCTTCA+AGG | 0.405808 | 5.3:+66363732 | None:intergenic |
| CATGAGCAGCAATTTCTGAT+TGG | 0.415675 | 5.3:+66365210 | None:intergenic |
| ATGACAAGGATCCTAGCATT+TGG | 0.417257 | 5.3:-66366417 | MS.gene80790:CDS |
| CTTCTTGGTTCCTCTTTCAA+AGG | 0.424962 | 5.3:-66366633 | MS.gene80790:CDS |
| AACATCAATTATAACCAAAA+CGG | 0.431934 | 5.3:+66365504 | None:intergenic |
| TAATGTCACTGATTTGATCA+AGG | 0.437836 | 5.3:-66362927 | MS.gene80790:CDS |
| TGACATTAAGATTGGGCAGC+AGG | 0.443727 | 5.3:+66362942 | None:intergenic |
| GATGTTGAACCTAAAGAGTT+GGG | 0.449227 | 5.3:-66365487 | MS.gene80790:CDS |
| TACAGGATCTCATGGTTTAA+GGG | 0.462303 | 5.3:+66363661 | None:intergenic |
| TGCAAAACTCACAGCCTTGA+AGG | 0.463569 | 5.3:-66363746 | MS.gene80790:CDS |
| TGTAGCTAAGGAGCATGTTG+TGG | 0.468792 | 5.3:-66366235 | MS.gene80790:intron |
| TCCTTGTCATCTTCTTCAAA+CGG | 0.478344 | 5.3:+66366430 | None:intergenic |
| TCTCAACTTCCTGCTGTACT+TGG | 0.483401 | 5.3:+66362341 | None:intergenic |
| TGATGTTGAACCTAAAGAGT+TGG | 0.483855 | 5.3:-66365488 | MS.gene80790:CDS |
| GTAGCTAAGGAGCATGTTGT+GGG | 0.499396 | 5.3:-66366234 | MS.gene80790:intron |
| TCTATGTTCAAGAGAATCAA+TGG | 0.505078 | 5.3:-66366361 | MS.gene80790:intron |
| TGCTCAACAAAGAACATGAA+AGG | 0.510479 | 5.3:-66362391 | MS.gene80790:CDS |
| GTTGTGGGGTGGTATAGTAC+TGG | 0.515160 | 5.3:-66366219 | MS.gene80790:CDS |
| CTTCCTGCTGTACTTGGTAC+AGG | 0.516124 | 5.3:+66362347 | None:intergenic |
| AACCAACCTGCAAATGATAC+AGG | 0.522061 | 5.3:+66363644 | None:intergenic |
| TGCTGTTGAGGAGGTTAAAG+AGG | 0.523785 | 5.3:-66365443 | MS.gene80790:intron |
| GACACTCGCAAACGCGTCGT+TGG | 0.526211 | 5.3:-66366660 | MS.gene80790:CDS |
| GAAAACTAATGATCAAATGC+TGG | 0.532471 | 5.3:-66362801 | MS.gene80790:CDS |
| CCTTGTTGTTAATCAAGTTG+TGG | 0.533219 | 5.3:+66362738 | None:intergenic |
| GCTCAACAAAGAACATGAAA+GGG | 0.533816 | 5.3:-66362390 | MS.gene80790:CDS |
| AAATCAGTGACATTAAGATT+GGG | 0.537245 | 5.3:+66362935 | None:intergenic |
| CAAAAGGCACCTCTGTTGCA+AGG | 0.539561 | 5.3:+66363910 | None:intergenic |
| TGATCAAGAAACCAAATGCT+AGG | 0.549445 | 5.3:+66366406 | None:intergenic |
| ACATTTGCTTAGAGATGTGA+AGG | 0.560287 | 5.3:-66363949 | MS.gene80790:CDS |
| ATCGACGGTGCCTTTGAAAG+AGG | 0.562674 | 5.3:+66366623 | None:intergenic |
| GCAAAACTCACAGCCTTGAA+GGG | 0.565234 | 5.3:-66363745 | MS.gene80790:CDS |
| AATTGCTGCTCATGAAGTTG+AGG | 0.565331 | 5.3:-66365201 | MS.gene80790:CDS |
| ACTATGCTGAGTAAAACTAA+AGG | 0.568083 | 5.3:+66366708 | None:intergenic |
| GCAAATGATACAGGATCTCA+TGG | 0.569112 | 5.3:+66363653 | None:intergenic |
| TGCCACTCAGAAGAGTCAAA+AGG | 0.570358 | 5.3:-66365246 | MS.gene80790:CDS |
| AAAAGCTTACTATGCTGTTG+AGG | 0.571528 | 5.3:-66365455 | MS.gene80790:CDS |
| GTGCCTGTACCAAGTACAGC+AGG | 0.578421 | 5.3:-66362350 | MS.gene80790:CDS |
| AGCTTACTATGCTGTTGAGG+AGG | 0.588880 | 5.3:-66365452 | MS.gene80790:CDS |
| CATTAGCACCCTTGCAACAG+AGG | 0.592118 | 5.3:-66363919 | MS.gene80790:intron |
| CCACAACTTGATTAACAACA+AGG | 0.604169 | 5.3:-66362738 | MS.gene80790:intron |
| TTCCATCAATGACAAGGTCA+AGG | 0.607781 | 5.3:+66363689 | None:intergenic |
| GATATCACCAACAGCTACGC+CGG | 0.611908 | 5.3:-66366603 | MS.gene80790:intron |
| AAAAGGCACCTCTGTTGCAA+GGG | 0.618690 | 5.3:+66363911 | None:intergenic |
| GCCGTTTGAAGAAGATGACA+AGG | 0.651393 | 5.3:-66366431 | MS.gene80790:CDS |
| AATTGTACCGGCGTAGCTGT+TGG | 0.654663 | 5.3:+66366596 | None:intergenic |
| GTAGCTGTTGGTGATATCGA+CGG | 0.656872 | 5.3:+66366608 | None:intergenic |
| CTAAGGAGCATGTTGTGGGG+TGG | 0.656967 | 5.3:-66366230 | MS.gene80790:CDS |
| CACTTCTAATGAGAGACGAT+AGG | 0.662773 | 5.3:+66362771 | None:intergenic |
| GAAGCTTTCCATCAATGACA+AGG | 0.673682 | 5.3:+66363683 | None:intergenic |
| TAGCTAAGGAGCATGTTGTG+GGG | 0.682914 | 5.3:-66366233 | MS.gene80790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTTAAAAACAACTA+TGG | + | chr5.3:66362992-66363011 | None:intergenic | 10.0% |
| !!! | ATTTGCATATTTTTTTATAT+TGG | - | chr5.3:66362800-66362819 | MS.gene80790:CDS | 10.0% |
| !!! | TAATTAAGTGTTATTAATAA+CGG | + | chr5.3:66365078-66365097 | None:intergenic | 10.0% |
| !!! | TACTTTTCTTTTTTAAATTA+TGG | - | chr5.3:66365718-66365737 | MS.gene80790:intron | 10.0% |
| !!! | TATTTTTCATTTATGATTTT+TGG | - | chr5.3:66365031-66365050 | MS.gene80790:intron | 10.0% |
| !!! | TTTGCATATTTTTTTATATT+GGG | - | chr5.3:66362801-66362820 | MS.gene80790:CDS | 10.0% |
| !!! | AAAGAAGAGTATAAATTTAT+AGG | + | chr5.3:66365124-66365143 | None:intergenic | 15.0% |
| !!! | TGATTTGGTTTTATATTTAT+GGG | - | chr5.3:66366446-66366465 | MS.gene80790:intron | 15.0% |
| !! | AAAATAAAATAATGCTGAGT+CGG | - | chr5.3:66364580-66364599 | MS.gene80790:intron | 20.0% |
| !! | AAATTTGATGTGATTAAAGA+TGG | - | chr5.3:66362824-66362843 | MS.gene80790:intron | 20.0% |
| !! | AACATCAATTATAACCAAAA+CGG | + | chr5.3:66363610-66363629 | None:intergenic | 20.0% |
| !! | AATTGTATTACTTGAAAACA+AGG | + | chr5.3:66366060-66366079 | None:intergenic | 20.0% |
| !! | ATATTTGCAAGAAAGATAAA+AGG | + | chr5.3:66363707-66363726 | None:intergenic | 20.0% |
| !! | ATCAATAGTTTCATAGATTA+TGG | + | chr5.3:66365494-66365513 | None:intergenic | 20.0% |
| !! | ATTGAAATTGAAAATTGTAC+CGG | + | chr5.3:66362530-66362549 | None:intergenic | 20.0% |
| !! | TATTAAGTGAAGAAAGAATA+TGG | + | chr5.3:66364690-66364709 | None:intergenic | 20.0% |
| !! | TCATAAACATAGCTATAAAA+AGG | + | chr5.3:66363056-66363075 | None:intergenic | 20.0% |
| !! | TTCAATATAATTACATGTGT+CGG | - | chr5.3:66362558-66362577 | MS.gene80790:intron | 20.0% |
| !!! | ATTTGTCTAATTTGATTTCT+GGG | + | chr5.3:66364008-66364027 | None:intergenic | 20.0% |
| !!! | CACATAGTTTAATTTAAAAC+TGG | - | chr5.3:66365575-66365594 | MS.gene80790:intron | 20.0% |
| !!! | CTGATTTGGTTTTATATTTA+TGG | - | chr5.3:66366445-66366464 | MS.gene80790:intron | 20.0% |
| !!! | TATTTGTCTAATTTGATTTC+TGG | + | chr5.3:66364009-66364028 | None:intergenic | 20.0% |
| !!! | TGATTTATTTTTTGTAGCTA+AGG | - | chr5.3:66362864-66362883 | MS.gene80790:intron | 20.0% |
| !!! | TTTTGTTTATTACTGCAATT+AGG | - | chr5.3:66363008-66363027 | MS.gene80790:intron | 20.0% |
| ! | AAAAATAGCAGATAGTGTAA+TGG | + | chr5.3:66365018-66365037 | None:intergenic | 25.0% |
| ! | AAAATAGCAGATAGTGTAAT+GGG | + | chr5.3:66365017-66365036 | None:intergenic | 25.0% |
| ! | AAATCAGTGACATTAAGATT+GGG | + | chr5.3:66366179-66366198 | None:intergenic | 25.0% |
| ! | AATAGCAGTTTGTCTAAATT+TGG | + | chr5.3:66363244-66363263 | None:intergenic | 25.0% |
| ! | AATCAATCAATAATCCATAG+AGG | + | chr5.3:66366271-66366290 | None:intergenic | 25.0% |
| ! | AATGAGGATAATGATTATGT+TGG | - | chr5.3:66364779-66364798 | MS.gene80790:intron | 25.0% |
| ! | ACAACCAATTATTAATCCTT+AGG | + | chr5.3:66363483-66363502 | None:intergenic | 25.0% |
| ! | ACATCAATTATAACCAAAAC+GGG | + | chr5.3:66363609-66363628 | None:intergenic | 25.0% |
| ! | AGAGAAACAAAATGAATTAG+TGG | + | chr5.3:66364233-66364252 | None:intergenic | 25.0% |
| ! | ATGAGGATAATGATTATGTT+GGG | - | chr5.3:66364780-66364799 | MS.gene80790:intron | 25.0% |
| ! | ATTGAAAAATACACCATTAG+AGG | + | chr5.3:66365276-66365295 | None:intergenic | 25.0% |
| ! | ATTTAAAAACAACTATGGAG+TGG | + | chr5.3:66362987-66363006 | None:intergenic | 25.0% |
| ! | GAAACTTAATTGTTAGATGT+AGG | - | chr5.3:66363811-66363830 | MS.gene80790:intron | 25.0% |
| ! | GCACTGTTAAAAACAAATAA+AGG | + | chr5.3:66362662-66362681 | None:intergenic | 25.0% |
| ! | TAAAAACGCAACAAATTTCA+TGG | - | chr5.3:66362353-66362372 | MS.gene80790:CDS | 25.0% |
| ! | TCTCTATGTTATCTTGATTT+GGG | - | chr5.3:66366080-66366099 | MS.gene80790:intron | 25.0% |
| ! | TGGTATGAAAGATTATTGTT+TGG | - | chr5.3:66362770-66362789 | MS.gene80790:CDS | 25.0% |
| ! | TTACTTCTAATTTCTGTTTC+TGG | - | chr5.3:66364890-66364909 | MS.gene80790:intron | 25.0% |
| ! | TTCTCTATGTTATCTTGATT+TGG | - | chr5.3:66366079-66366098 | MS.gene80790:intron | 25.0% |
| ! | TTGCATCATGAACAAAATAA+AGG | + | chr5.3:66363985-66364004 | None:intergenic | 25.0% |
| !! | AAGCTTTTCTAATGTAACAA+AGG | + | chr5.3:66366632-66366651 | None:intergenic | 25.0% |
| !! | ATCAGATTTTTGCTTTCTTT+AGG | - | chr5.3:66365650-66365669 | MS.gene80790:intron | 25.0% |
| !! | TATAGCTTTTGCAAAAAATG+CGG | - | chr5.3:66363170-66363189 | MS.gene80790:intron | 25.0% |
| !! | TCAGATTTTTGCTTTCTTTA+GGG | - | chr5.3:66365651-66365670 | MS.gene80790:intron | 25.0% |
| !!! | ATCCTCATTTTTAAATAGTG+AGG | + | chr5.3:66364768-66364787 | None:intergenic | 25.0% |
| !!! | GATTATTCTTTTTTGACACA+AGG | - | chr5.3:66365306-66365325 | MS.gene80790:intron | 25.0% |
| AAAAAAACTTAGGGTGTGTT+TGG | + | chr5.3:66365800-66365819 | None:intergenic | 30.0% | |
| AAAAATATGGAGTGTATGAG+AGG | + | chr5.3:66364284-66364303 | None:intergenic | 30.0% | |
| AAAGCTCAAGAAACAAAACA+TGG | + | chr5.3:66366544-66366563 | None:intergenic | 30.0% | |
| AAATCAATTTAGTCCTCCTT+AGG | - | chr5.3:66366512-66366531 | MS.gene80790:intron | 30.0% | |
| AACACACCCAAAAAAAACTT+AGG | + | chr5.3:66365810-66365829 | None:intergenic | 30.0% | |
| AAGAGAAACTGTTATGAAAC+TGG | - | chr5.3:66364038-66364057 | MS.gene80790:intron | 30.0% | |
| AATCAATTTAGTCCTCCTTA+GGG | - | chr5.3:66366513-66366532 | MS.gene80790:intron | 30.0% | |
| AATCATTCTGCTTTATGTGA+TGG | - | chr5.3:66363762-66363781 | MS.gene80790:intron | 30.0% | |
| ACACACCCAAAAAAAACTTA+GGG | + | chr5.3:66365809-66365828 | None:intergenic | 30.0% | |
| ACTATGCTGAGTAAAACTAA+AGG | + | chr5.3:66362406-66362425 | None:intergenic | 30.0% | |
| AGCAAAAATCTGATCATTTC+AGG | + | chr5.3:66365644-66365663 | None:intergenic | 30.0% | |
| ATAGCTATGTTTATGACTCT+AGG | - | chr5.3:66363060-66363079 | MS.gene80790:intron | 30.0% | |
| ATTATAACCAAAACGGGATT+TGG | + | chr5.3:66363603-66363622 | None:intergenic | 30.0% | |
| CAAATCAGTGACATTAAGAT+TGG | + | chr5.3:66366180-66366199 | None:intergenic | 30.0% | |
| CATATATCAACCTAAATTCC+TGG | + | chr5.3:66365539-66365558 | None:intergenic | 30.0% | |
| GAAAACTAATGATCAAATGC+TGG | - | chr5.3:66366310-66366329 | MS.gene80790:intron | 30.0% | |
| GAACATCAATAATCGATAAG+AGG | + | chr5.3:66363549-66363568 | None:intergenic | 30.0% | |
| GACATGGTAAAACACAATAT+TGG | + | chr5.3:66366121-66366140 | None:intergenic | 30.0% | |
| GCAACCTAAGGATTAATAAT+TGG | - | chr5.3:66363476-66363495 | MS.gene80790:intron | 30.0% | |
| GTATAACAAAAGTGAGCAAA+AGG | + | chr5.3:66365220-66365239 | None:intergenic | 30.0% | |
| TAAAATTCCGCTACACAATA+GGG | + | chr5.3:66363317-66363336 | None:intergenic | 30.0% | |
| TAATGACCACACCAAAAATA+TGG | + | chr5.3:66364297-66364316 | None:intergenic | 30.0% | |
| TAGATGTAGGAACTTAAGAA+TGG | - | chr5.3:66363824-66363843 | MS.gene80790:intron | 30.0% | |
| TAGCAAAATAAAACAGGACA+TGG | + | chr5.3:66366137-66366156 | None:intergenic | 30.0% | |
| TATTGAACAACACTGTCATA+TGG | + | chr5.3:66364381-66364400 | None:intergenic | 30.0% | |
| TCATACTAAATAGTGTGTTG+CGG | + | chr5.3:66363270-66363289 | None:intergenic | 30.0% | |
| TCTATGTTCAAGAGAATCAA+TGG | - | chr5.3:66362750-66362769 | MS.gene80790:CDS | 30.0% | |
| TGAAGAAAGAATATGGAGAT+TGG | + | chr5.3:66364683-66364702 | None:intergenic | 30.0% | |
| TGAATCAAAGTTTAGTATCC+AGG | - | chr5.3:66366606-66366625 | MS.gene80790:CDS | 30.0% | |
| TGAGGATAATGATTATGTTG+GGG | - | chr5.3:66364781-66364800 | MS.gene80790:intron | 30.0% | |
| TGCCTCACTATTTAAAAATG+AGG | - | chr5.3:66364763-66364782 | MS.gene80790:intron | 30.0% | |
| TGTGGCATAGTAATTTAAAG+AGG | - | chr5.3:66363139-66363158 | MS.gene80790:intron | 30.0% | |
| TTGATGTTCGTCTCAATTTA+TGG | - | chr5.3:66363560-66363579 | MS.gene80790:intron | 30.0% | |
| TTGTTAAATAGCAGGTATAG+CGG | - | chr5.3:66363199-66363218 | MS.gene80790:intron | 30.0% | |
| ! | GAGCTTTAGTTAAGTTGTTT+GGG | - | chr5.3:66366557-66366576 | MS.gene80790:intron | 30.0% |
| ! | GTTAGTCTGTTTGTTAGTTT+CGG | - | chr5.3:66365949-66365968 | MS.gene80790:intron | 30.0% |
| ! | TCTCATACACTCCATATTTT+TGG | - | chr5.3:66364283-66364302 | MS.gene80790:intron | 30.0% |
| ! | TGAGCTTTAGTTAAGTTGTT+TGG | - | chr5.3:66366556-66366575 | MS.gene80790:intron | 30.0% |
| ! | TGGGTTGAATTGTTTGAAAT+TGG | - | chr5.3:66366576-66366595 | MS.gene80790:intron | 30.0% |
| !! | CAGGAATTTAGGTTGATATA+TGG | - | chr5.3:66365537-66365556 | MS.gene80790:intron | 30.0% |
| !! | TAATGTCACTGATTTGATCA+AGG | - | chr5.3:66366184-66366203 | MS.gene80790:CDS | 30.0% |
| !!! | AACACACCCTAAGTTTTTTT+TGG | - | chr5.3:66365800-66365819 | MS.gene80790:intron | 30.0% |
| !!! | ACACACCCTAAGTTTTTTTT+GGG | - | chr5.3:66365801-66365820 | MS.gene80790:intron | 30.0% |
| !!! | ATGTCCTGTTTTATTTTGCT+AGG | - | chr5.3:66366136-66366155 | MS.gene80790:intron | 30.0% |
| !!! | CTTTTTTGACACAAGGATAA+AGG | - | chr5.3:66365313-66365332 | MS.gene80790:intron | 30.0% |
| !!! | GTTTTTTTTGGGTGTGTTTA+TGG | - | chr5.3:66365812-66365831 | MS.gene80790:intron | 30.0% |
| AAAAATACACCATTAGAGGC+AGG | + | chr5.3:66365272-66365291 | None:intergenic | 35.0% | |
| AAAAGCTTACTATGCTGTTG+AGG | - | chr5.3:66363656-66363675 | MS.gene80790:CDS | 35.0% | |
| ACATTTGCTTAGAGATGTGA+AGG | - | chr5.3:66365162-66365181 | MS.gene80790:intron | 35.0% | |
| ACGTCCTAGCAAAATAAAAC+AGG | + | chr5.3:66366143-66366162 | None:intergenic | 35.0% | |
| AGCGGTTATTGCTTACATAT+CGG | - | chr5.3:66364515-66364534 | MS.gene80790:intron | 35.0% | |
| ATACAGGATCTCATGGTTTA+AGG | + | chr5.3:66365454-66365473 | None:intergenic | 35.0% | |
| ATACATATAGGAAAGGAGTG+GGG | + | chr5.3:66364196-66364215 | None:intergenic | 35.0% | |
| CATACATATAGGAAAGGAGT+GGG | + | chr5.3:66364197-66364216 | None:intergenic | 35.0% | |
| CCACAACTTGATTAACAACA+AGG | - | chr5.3:66366373-66366392 | MS.gene80790:CDS | 35.0% | |
| CTAAAATTCCGCTACACAAT+AGG | + | chr5.3:66363318-66363337 | None:intergenic | 35.0% | |
| CTATGAAACTATTGATGCTC+TGG | - | chr5.3:66365498-66365517 | MS.gene80790:CDS | 35.0% | |
| CTTTGCTCTGTAGATAGTTT+GGG | + | chr5.3:66364109-66364128 | None:intergenic | 35.0% | |
| GAAATAGGTATGTCATGGAA+TGG | - | chr5.3:66363932-66363951 | MS.gene80790:CDS | 35.0% | |
| GACAATCTCGTTTGTCATAT+AGG | - | chr5.3:66365338-66365357 | MS.gene80790:intron | 35.0% | |
| GATGTTGAACCTAAAGAGTT+GGG | - | chr5.3:66363624-66363643 | MS.gene80790:intron | 35.0% | |
| GCTCAACAAAGAACATGAAA+GGG | - | chr5.3:66366721-66366740 | MS.gene80790:CDS | 35.0% | |
| GTGTTATGCAATTTCCTCTA+TGG | - | chr5.3:66366254-66366273 | MS.gene80790:intron | 35.0% | |
| GTTTATGGTAAAAAGCTCTG+TGG | - | chr5.3:66365827-66365846 | MS.gene80790:intron | 35.0% | |
| TAATGATTATGTTGGGGAAG+AGG | - | chr5.3:66364787-66364806 | MS.gene80790:intron | 35.0% | |
| TAATTATACCGAGTGTAGCT+TGG | - | chr5.3:66363090-66363109 | MS.gene80790:intron | 35.0% | |
| TACAGGATCTCATGGTTTAA+GGG | + | chr5.3:66365453-66365472 | None:intergenic | 35.0% | |
| TCCTTGTCATCTTCTTCAAA+CGG | + | chr5.3:66362684-66362703 | None:intergenic | 35.0% | |
| TCTAAATTTGGCTATGCTAG+AGG | + | chr5.3:66363232-66363251 | None:intergenic | 35.0% | |
| TGAGGATTCATTGAAGTTGA+AGG | - | chr5.3:66364737-66364756 | MS.gene80790:intron | 35.0% | |
| TGATCAAGAAACCAAATGCT+AGG | + | chr5.3:66362708-66362727 | None:intergenic | 35.0% | |
| TGATGTTGAACCTAAAGAGT+TGG | - | chr5.3:66363623-66363642 | MS.gene80790:intron | 35.0% | |
| TGCTCAACAAAGAACATGAA+AGG | - | chr5.3:66366720-66366739 | MS.gene80790:CDS | 35.0% | |
| TTAGTGATGAGAGTTTACCT+AGG | + | chr5.3:66364645-66364664 | None:intergenic | 35.0% | |
| TTGAGGAAATAGGTATGTCA+TGG | - | chr5.3:66363927-66363946 | MS.gene80790:CDS | 35.0% | |
| TTTCTAATGTAACAAAGGCC+TGG | + | chr5.3:66366627-66366646 | None:intergenic | 35.0% | |
| TTTGGTTGTAGGGTTTAGAA+GGG | - | chr5.3:66365678-66365697 | MS.gene80790:intron | 35.0% | |
| TTTGTATCCCTATTGTGTAG+CGG | - | chr5.3:66363307-66363326 | MS.gene80790:intron | 35.0% | |
| ! | ACAACTATGGAGTGGATTTA+AGG | + | chr5.3:66362979-66362998 | None:intergenic | 35.0% |
| ! | ACAGCATAGTAAGCTTTTGT+AGG | + | chr5.3:66363654-66363673 | None:intergenic | 35.0% |
| ! | AGATCATTTTCTCGCAGTTT+CGG | + | chr5.3:66362919-66362938 | None:intergenic | 35.0% |
| ! | ATTCTGCTTTATGTGATGGA+AGG | - | chr5.3:66363766-66363785 | MS.gene80790:intron | 35.0% |
| ! | GTTATTGTTGTCTGCTGATT+TGG | - | chr5.3:66366431-66366450 | MS.gene80790:CDS | 35.0% |
| ! | TGACAGTGTTGTTCAATAAC+CGG | - | chr5.3:66364383-66364402 | MS.gene80790:intron | 35.0% |
| !! | ATAGTGTAATGGGCAAATAG+TGG | + | chr5.3:66365007-66365026 | None:intergenic | 35.0% |
| !! | CCTTGTTGTTAATCAAGTTG+TGG | + | chr5.3:66366376-66366395 | None:intergenic | 35.0% |
| !! | TTGGCAATCAGCTATTTTCT+GGG | - | chr5.3:66365050-66365069 | MS.gene80790:intron | 35.0% |
| !! | TTTGGCAATCAGCTATTTTC+TGG | - | chr5.3:66365049-66365068 | MS.gene80790:intron | 35.0% |
| !! | TTTTGGTTGTAGGGTTTAGA+AGG | - | chr5.3:66365677-66365696 | MS.gene80790:intron | 35.0% |
| !!! | TACACTCCATATTTTTGGTG+TGG | - | chr5.3:66364288-66364307 | MS.gene80790:intron | 35.0% |
| !!! | TGCTTTCTTTAGGGTGTTTT+TGG | - | chr5.3:66365660-66365679 | MS.gene80790:intron | 35.0% |
| !!! | TTAGGGTGTTTTTGGTTGTA+GGG | - | chr5.3:66365668-66365687 | MS.gene80790:intron | 35.0% |
| !!! | TTTAGGGTGTTTTTGGTTGT+AGG | - | chr5.3:66365667-66365686 | MS.gene80790:intron | 35.0% |
| AACAACACTGTCATATGGAC+AGG | + | chr5.3:66364376-66364395 | None:intergenic | 40.0% | |
| AACCAACCTGCAAATGATAC+AGG | + | chr5.3:66365470-66365489 | None:intergenic | 40.0% | |
| AATAACCGCTATCGCCAATA+TGG | + | chr5.3:66364505-66364524 | None:intergenic | 40.0% | |
| AATTGCTGCTCATGAAGTTG+AGG | - | chr5.3:66363910-66363929 | MS.gene80790:intron | 40.0% | |
| ACCAAATGGTCCAGGAATTT+AGG | - | chr5.3:66365526-66365545 | MS.gene80790:intron | 40.0% | |
| ACCTAAATTCCTGGACCATT+TGG | + | chr5.3:66365530-66365549 | None:intergenic | 40.0% | |
| AGGGAACACAATTGTCTGTT+AGG | + | chr5.3:66364157-66364176 | None:intergenic | 40.0% | |
| AGGTTGCGAGAAAATGTCAT+GGG | + | chr5.3:66363463-66363482 | None:intergenic | 40.0% | |
| ATATGACTATGCCACATCAG+AGG | + | chr5.3:66363417-66363436 | None:intergenic | 40.0% | |
| ATCCTGTATCATTTGCAGGT+TGG | - | chr5.3:66365465-66365484 | MS.gene80790:CDS | 40.0% | |
| ATGACAAGGATCCTAGCATT+TGG | - | chr5.3:66362694-66362713 | MS.gene80790:intron | 40.0% | |
| ATTGAGGGTTTAGGAGAAGA+AGG | + | chr5.3:66365777-66365796 | None:intergenic | 40.0% | |
| CAAAACATGGTAAAGCCCTA+AGG | + | chr5.3:66366531-66366550 | None:intergenic | 40.0% | |
| CACTGCCATACATATAGGAA+AGG | + | chr5.3:66364203-66364222 | None:intergenic | 40.0% | |
| CAGAATCAATGACGTGTAAG+AGG | + | chr5.3:66364719-66364738 | None:intergenic | 40.0% | |
| CATGAGCAGCAATTTCTGAT+TGG | + | chr5.3:66363904-66363923 | None:intergenic | 40.0% | |
| CCACTCCTTTCCTATATGTA+TGG | - | chr5.3:66364195-66364214 | MS.gene80790:intron | 40.0% | |
| CCATACATATAGGAAAGGAG+TGG | + | chr5.3:66364198-66364217 | None:intergenic | 40.0% | |
| CTTCTTGGTTCCTCTTTCAA+AGG | - | chr5.3:66362478-66362497 | MS.gene80790:intron | 40.0% | |
| CTTTCCTATATGTATGGCAG+TGG | - | chr5.3:66364201-66364220 | MS.gene80790:intron | 40.0% | |
| GAAGCTTTCCATCAATGACA+AGG | + | chr5.3:66365431-66365450 | None:intergenic | 40.0% | |
| GACAACAAAACCAACTCGAA+AGG | + | chr5.3:66365250-66365269 | None:intergenic | 40.0% | |
| GCAAATGATACAGGATCTCA+TGG | + | chr5.3:66365461-66365480 | None:intergenic | 40.0% | |
| GCAATTAGGAGCTTATGCTA+CGG | - | chr5.3:66363022-66363041 | MS.gene80790:intron | 40.0% | |
| GCTCATGAAGTTGAGGAAAT+AGG | - | chr5.3:66363917-66363936 | MS.gene80790:intron | 40.0% | |
| GCTTTGCTCTGTAGATAGTT+TGG | + | chr5.3:66364110-66364129 | None:intergenic | 40.0% | |
| GTAGGAATTCCCAACTCTTT+AGG | + | chr5.3:66363636-66363655 | None:intergenic | 40.0% | |
| TACATATAGGAAAGGAGTGG+GGG | + | chr5.3:66364195-66364214 | None:intergenic | 40.0% | |
| TACCTTGACCTTGTCATTGA+TGG | - | chr5.3:66365420-66365439 | MS.gene80790:intron | 40.0% | |
| TAGGTTGCGAGAAAATGTCA+TGG | + | chr5.3:66363464-66363483 | None:intergenic | 40.0% | |
| TCTCATCACTAAACTGCCTT+GGG | - | chr5.3:66364653-66364672 | MS.gene80790:intron | 40.0% | |
| TGAAACTATTGATGCTCTGG+CGG | - | chr5.3:66365501-66365520 | MS.gene80790:CDS | 40.0% | |
| TGAGATCCTGTATCATTTGC+AGG | - | chr5.3:66365461-66365480 | MS.gene80790:CDS | 40.0% | |
| TGGGGAAGAGGAGAATAATT+TGG | - | chr5.3:66364799-66364818 | MS.gene80790:intron | 40.0% | |
| TGGGTTTGGCAAAATTACTG+TGG | - | chr5.3:66363121-66363140 | MS.gene80790:intron | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr5.3:66365786-66365805 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr5.3:66365792-66365811 | None:intergenic | 40.0% | |
| TTCCATCAATGACAAGGTCA+AGG | + | chr5.3:66365425-66365444 | None:intergenic | 40.0% | |
| TTGAGGGTTTAGGAGAAGAA+GGG | + | chr5.3:66365776-66365795 | None:intergenic | 40.0% | |
| TTGGTTGTAGGGTTTAGAAG+GGG | - | chr5.3:66365679-66365698 | MS.gene80790:intron | 40.0% | |
| ! | CTATGTTCCAAATCCCGTTT+TGG | - | chr5.3:66363593-66363612 | MS.gene80790:intron | 40.0% |
| ! | GATTTGATCAAGGCTTTTGC+AGG | - | chr5.3:66366194-66366213 | MS.gene80790:CDS | 40.0% |
| ! | GCACTGACACTTCTGATTAA+AGG | + | chr5.3:66362601-66362620 | None:intergenic | 40.0% |
| ! | GGTCAGTGTTGTTAAATAGC+AGG | - | chr5.3:66363191-66363210 | MS.gene80790:intron | 40.0% |
| ! | GTTAGTTTCGGCTTAAGCTT+GGG | - | chr5.3:66365961-66365980 | MS.gene80790:intron | 40.0% |
| ! | TACATTGAGTCCTTTCGAGT+TGG | - | chr5.3:66365237-66365256 | MS.gene80790:CDS | 40.0% |
| ! | TGACATTTTCTCGCAACCTA+AGG | - | chr5.3:66363464-66363483 | MS.gene80790:intron | 40.0% |
| ! | TGTTAGTTTCGGCTTAAGCT+TGG | - | chr5.3:66365960-66365979 | MS.gene80790:intron | 40.0% |
| ! | TTACCTAGGTCGTAGGTTTT+AGG | + | chr5.3:66364631-66364650 | None:intergenic | 40.0% |
| !! | ACTTTGGATTGGCCGAATTA+CGG | + | chr5.3:66363393-66363412 | None:intergenic | 40.0% |
| !! | CTTACACGTCATTGATTCTG+AGG | - | chr5.3:66364719-66364738 | MS.gene80790:intron | 40.0% |
| !! | TTTTGTTGTCCTGCCTCTAA+TGG | - | chr5.3:66365260-66365279 | MS.gene80790:intron | 40.0% |
| AAAGCTCTGTGGATAGTCAG+AGG | - | chr5.3:66365838-66365857 | MS.gene80790:intron | 45.0% | |
| AAATGTTCCACTCCTGCACA+AGG | + | chr5.3:66365148-66365167 | None:intergenic | 45.0% | |
| AACATGGTAAAGCCCTAAGG+AGG | + | chr5.3:66366528-66366547 | None:intergenic | 45.0% | |
| AATGTTCCACTCCTGCACAA+GGG | + | chr5.3:66365147-66365166 | None:intergenic | 45.0% | |
| ACACAATTGTCTGTTAGGCC+AGG | + | chr5.3:66364152-66364171 | None:intergenic | 45.0% | |
| ACTCCTAAAACCTACGACCT+AGG | - | chr5.3:66364625-66364644 | MS.gene80790:intron | 45.0% | |
| AGACAATTGTGTTCCCTTCC+TGG | - | chr5.3:66364160-66364179 | MS.gene80790:intron | 45.0% | |
| AGCTTACTATGCTGTTGAGG+AGG | - | chr5.3:66363659-66363678 | MS.gene80790:CDS | 45.0% | |
| ATACCGAGTGTAGCTTGGTT+GGG | - | chr5.3:66363095-66363114 | MS.gene80790:intron | 45.0% | |
| ATAGCATAGCAGCGCTATAC+CGG | + | chr5.3:66364405-66364424 | None:intergenic | 45.0% | |
| ATGCTGAGTCGGTGATTAGA+TGG | - | chr5.3:66364591-66364610 | MS.gene80790:intron | 45.0% | |
| CAAAGCTCCTCGGAGAAATT+TGG | + | chr5.3:66365998-66366017 | None:intergenic | 45.0% | |
| CACAATTGTCTGTTAGGCCA+GGG | + | chr5.3:66364151-66364170 | None:intergenic | 45.0% | |
| CTCTCATCACTAAACTGCCT+TGG | - | chr5.3:66364652-66364671 | MS.gene80790:intron | 45.0% | |
| CTGCTATGCTATTGCACATC+AGG | - | chr5.3:66364413-66364432 | MS.gene80790:intron | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr5.3:66365793-66365812 | None:intergenic | 45.0% | |
| GCAAAACTCACAGCCTTGAA+GGG | - | chr5.3:66365366-66365385 | MS.gene80790:intron | 45.0% | |
| GCCGTTTGAAGAAGATGACA+AGG | - | chr5.3:66362680-66362699 | MS.gene80790:intron | 45.0% | |
| GTAAACGAGGTGTGTGAGAA+GGG | - | chr5.3:66365916-66365935 | MS.gene80790:intron | 45.0% | |
| GTGTGAGAAGGGAAATGAGA+TGG | - | chr5.3:66365927-66365946 | MS.gene80790:intron | 45.0% | |
| GTTGAGGAGGTTAAAGAGGT+GGG | - | chr5.3:66363672-66363691 | MS.gene80790:CDS | 45.0% | |
| TACTCTTCTTTCCCTTGTGC+AGG | - | chr5.3:66365133-66365152 | MS.gene80790:intron | 45.0% | |
| TATACCGAGTGTAGCTTGGT+TGG | - | chr5.3:66363094-66363113 | MS.gene80790:intron | 45.0% | |
| TCACAGAGAATATGCTTCCC+TGG | - | chr5.3:66364131-66364150 | MS.gene80790:intron | 45.0% | |
| TCTTGCATCCAAACCCTTCA+AGG | + | chr5.3:66365382-66365401 | None:intergenic | 45.0% | |
| TGACATTAAGATTGGGCAGC+AGG | + | chr5.3:66366172-66366191 | None:intergenic | 45.0% | |
| TGAGAGTTTACCTAGGTCGT+AGG | + | chr5.3:66364638-66364657 | None:intergenic | 45.0% | |
| TGAGCCACTGCCATACATAT+AGG | + | chr5.3:66364208-66364227 | None:intergenic | 45.0% | |
| TGCAAAACTCACAGCCTTGA+AGG | - | chr5.3:66365365-66365384 | MS.gene80790:intron | 45.0% | |
| TGCCACTCAGAAGAGTCAAA+AGG | - | chr5.3:66363865-66363884 | MS.gene80790:intron | 45.0% | |
| TGCCATTGCTCACCGTAATT+CGG | - | chr5.3:66363378-66363397 | MS.gene80790:intron | 45.0% | |
| TGCTGAGTCGGTGATTAGAT+GGG | - | chr5.3:66364592-66364611 | MS.gene80790:intron | 45.0% | |
| TGCTGTTGAGGAGGTTAAAG+AGG | - | chr5.3:66363668-66363687 | MS.gene80790:CDS | 45.0% | |
| TGTAGGGTTTAGAAGGGGAA+GGG | - | chr5.3:66365684-66365703 | MS.gene80790:intron | 45.0% | |
| TGTTGAGGAGGTTAAAGAGG+TGG | - | chr5.3:66363671-66363690 | MS.gene80790:CDS | 45.0% | |
| TTCCACTACCACTGCAATAG+CGG | - | chr5.3:66364476-66364495 | MS.gene80790:intron | 45.0% | |
| TTGTAGGGTTTAGAAGGGGA+AGG | - | chr5.3:66365683-66365702 | MS.gene80790:intron | 45.0% | |
| ! | AATCCAAAGTGCCTCTGATG+TGG | - | chr5.3:66363403-66363422 | MS.gene80790:intron | 45.0% |
| ! | GTAGCTAAGGAGCATGTTGT+GGG | - | chr5.3:66362877-66362896 | MS.gene80790:intron | 45.0% |
| ! | TAGCTAAGGAGCATGTTGTG+GGG | - | chr5.3:66362878-66362897 | MS.gene80790:intron | 45.0% |
| ! | TGTAGCTAAGGAGCATGTTG+TGG | - | chr5.3:66362876-66362895 | MS.gene80790:intron | 45.0% |
| !! | AAAAGGCACCTCTGTTGCAA+GGG | + | chr5.3:66365203-66365222 | None:intergenic | 45.0% |
| !! | ACATCAGAGGCACTTTGGAT+TGG | + | chr5.3:66363404-66363423 | None:intergenic | 45.0% |
| !! | AGCTAGCAAGTTGGTTAGAG+GGG | - | chr5.3:66365863-66365882 | MS.gene80790:intron | 45.0% |
| !! | GACCTTTTGACTCTTCTGAG+TGG | + | chr5.3:66363870-66363889 | None:intergenic | 45.0% |
| !! | GAGCTAGCAAGTTGGTTAGA+GGG | - | chr5.3:66365862-66365881 | MS.gene80790:intron | 45.0% |
| !! | GAGCTTTGTTCTGGGGTTAT+TGG | - | chr5.3:66366010-66366029 | MS.gene80790:intron | 45.0% |
| !! | GTAGCTGTTGGTGATATCGA+CGG | + | chr5.3:66362506-66362525 | None:intergenic | 45.0% |
| !! | GTGTAATGGGCAAATAGTGG+AGG | + | chr5.3:66365004-66365023 | None:intergenic | 45.0% |
| !! | TAGCGTATCGACTTTCGTTG+CGG | + | chr5.3:66364450-66364469 | None:intergenic | 45.0% |
| !! | TGAGCTAGCAAGTTGGTTAG+AGG | - | chr5.3:66365861-66365880 | MS.gene80790:intron | 45.0% |
| AACCCCAGAACAAAGCTCCT+CGG | + | chr5.3:66366008-66366027 | None:intergenic | 50.0% | |
| ACTCACAGCCTTGAAGGGTT+TGG | - | chr5.3:66365371-66365390 | MS.gene80790:intron | 50.0% | |
| ACTGTGTCAATCGCGGAAAG+TGG | + | chr5.3:66363355-66363374 | None:intergenic | 50.0% | |
| AGGGTTTAGGAGAAGAAGGG+AGG | + | chr5.3:66365773-66365792 | None:intergenic | 50.0% | |
| ATGCTCTGGCGGTTACCAAA+TGG | - | chr5.3:66365512-66365531 | MS.gene80790:CDS | 50.0% | |
| CATTAGCACCCTTGCAACAG+AGG | - | chr5.3:66365192-66365211 | MS.gene80790:intron | 50.0% | |
| CTCCAGAAAGAATGGTGAGG+TGG | + | chr5.3:66364259-66364278 | None:intergenic | 50.0% | |
| CTTCCTGCTGTACTTGGTAC+AGG | + | chr5.3:66366767-66366786 | None:intergenic | 50.0% | |
| GAGAGGAGCTCCAGAAAGAA+TGG | + | chr5.3:66364267-66364286 | None:intergenic | 50.0% | |
| GAGCTCCAGAAAGAATGGTG+AGG | + | chr5.3:66364262-66364281 | None:intergenic | 50.0% | |
| GATATCACCAACAGCTACGC+CGG | - | chr5.3:66362508-66362527 | MS.gene80790:intron | 50.0% | |
| GCTGAGTCGGTGATTAGATG+GGG | - | chr5.3:66364593-66364612 | MS.gene80790:intron | 50.0% | |
| GGGAATGCCAAATTTCTCCG+AGG | - | chr5.3:66365988-66366007 | MS.gene80790:intron | 50.0% | |
| GGGTTTAGGAGAAGAAGGGA+GGG | + | chr5.3:66365772-66365791 | None:intergenic | 50.0% | |
| GGTAAACGAGGTGTGTGAGA+AGG | - | chr5.3:66365915-66365934 | MS.gene80790:intron | 50.0% | |
| GGTTTAGGAGAAGAAGGGAG+GGG | + | chr5.3:66365771-66365790 | None:intergenic | 50.0% | |
| GTAGGGTTTAGAAGGGGAAG+GGG | - | chr5.3:66365685-66365704 | MS.gene80790:intron | 50.0% | |
| GTTGTGGGGTGGTATAGTAC+TGG | - | chr5.3:66362892-66362911 | MS.gene80790:intron | 50.0% | |
| TAGGGTTTAGAAGGGGAAGG+GGG | - | chr5.3:66365686-66365705 | MS.gene80790:intron | 50.0% | |
| TCAGAGGTGAGCTAGCAAGT+TGG | - | chr5.3:66365854-66365873 | MS.gene80790:intron | 50.0% | |
| TGCAATAGCGGTGGCCATAT+TGG | - | chr5.3:66364488-66364507 | MS.gene80790:intron | 50.0% | |
| TGCCACCTCACCATTCTTTC+TGG | - | chr5.3:66364254-66364273 | MS.gene80790:intron | 50.0% | |
| TTCTTTCCCTTGTGCAGGAG+TGG | - | chr5.3:66365138-66365157 | MS.gene80790:intron | 50.0% | |
| ! | AATTGTACCGGCGTAGCTGT+TGG | + | chr5.3:66362518-66362537 | None:intergenic | 50.0% |
| ! | ATCGACGGTGCCTTTGAAAG+AGG | + | chr5.3:66362491-66362510 | None:intergenic | 50.0% |
| ! | TATGGAGATTGGAGTGCCCA+AGG | + | chr5.3:66364672-66364691 | None:intergenic | 50.0% |
| !! | ATGCCACATCAGAGGCACTT+TGG | + | chr5.3:66363409-66363428 | None:intergenic | 50.0% |
| !! | CAAAAGGCACCTCTGTTGCA+AGG | + | chr5.3:66365204-66365223 | None:intergenic | 50.0% |
| !! | CTCTGTTGCAAGGGTGCTAA+TGG | + | chr5.3:66365194-66365213 | None:intergenic | 50.0% |
| !! | GCTAGCAAGTTGGTTAGAGG+GGG | - | chr5.3:66365864-66365883 | MS.gene80790:intron | 50.0% |
| !! | TCTCCGAGGAGCTTTGTTCT+GGG | - | chr5.3:66366002-66366021 | MS.gene80790:intron | 50.0% |
| !! | TTCTCCGAGGAGCTTTGTTC+TGG | - | chr5.3:66366001-66366020 | MS.gene80790:intron | 50.0% |
| AGAGAGGGAACACGTGGAGT+CGG | - | chr5.3:66365889-66365908 | MS.gene80790:intron | 55.0% | |
| AGGGTTTAGAAGGGGAAGGG+GGG | - | chr5.3:66365687-66365706 | MS.gene80790:intron | 55.0% | |
| AGTGTAGCTTGGTTGGGTGG+TGG | - | chr5.3:66363101-66363120 | MS.gene80790:intron | 55.0% | |
| CACCGCTATTGCAGTGGTAG+TGG | + | chr5.3:66364481-66364500 | None:intergenic | 55.0% | |
| CACTACCACTGCAATAGCGG+TGG | - | chr5.3:66364479-66364498 | MS.gene80790:intron | 55.0% | |
| CCACCCAACCAAGCTACACT+CGG | + | chr5.3:66363101-66363120 | None:intergenic | 55.0% | |
| CGCGTCGTTGGAGTTCTTCT+TGG | - | chr5.3:66362463-66362482 | MS.gene80790:intron | 55.0% | |
| GAAAGGAGTGGGGGAGTTAG+TGG | + | chr5.3:66364186-66364205 | None:intergenic | 55.0% | |
| GACGCGTTTGCGAGTGTCTT+TGG | + | chr5.3:66362449-66362468 | None:intergenic | 55.0% | |
| GGCACTCACTGTGTCAATCG+CGG | + | chr5.3:66363362-66363381 | None:intergenic | 55.0% | |
| GGCCGAATTACGGTGAGCAA+TGG | + | chr5.3:66363383-66363402 | None:intergenic | 55.0% | |
| GGTGGCCATATTGGCGATAG+CGG | - | chr5.3:66364497-66364516 | MS.gene80790:intron | 55.0% | |
| GTGCCTGTACCAAGTACAGC+AGG | - | chr5.3:66366761-66366780 | MS.gene80790:CDS | 55.0% | |
| GTGTAGCTTGGTTGGGTGGT+GGG | - | chr5.3:66363102-66363121 | MS.gene80790:intron | 55.0% | |
| TAGGAGAAGAAGGGAGGGGA+GGG | + | chr5.3:66365767-66365786 | None:intergenic | 55.0% | |
| TATGGCCACCGCTATTGCAG+TGG | + | chr5.3:66364487-66364506 | None:intergenic | 55.0% | |
| TCGGCTTAAGCTTGGGCAGA+GGG | - | chr5.3:66365968-66365987 | MS.gene80790:intron | 55.0% | |
| TGGCGGTTACCAAATGGTCC+AGG | - | chr5.3:66365518-66365537 | MS.gene80790:CDS | 55.0% | |
| TGGTTAGAGGGGGAGAGAGA+GGG | - | chr5.3:66365874-66365893 | MS.gene80790:intron | 55.0% | |
| TTAGGAGAAGAAGGGAGGGG+AGG | + | chr5.3:66365768-66365787 | None:intergenic | 55.0% | |
| TTCGGCTTAAGCTTGGGCAG+AGG | - | chr5.3:66365967-66365986 | MS.gene80790:intron | 55.0% | |
| TTGGTTAGAGGGGGAGAGAG+AGG | - | chr5.3:66365873-66365892 | MS.gene80790:intron | 55.0% | |
| ! | CTAAGGAGCATGTTGTGGGG+TGG | - | chr5.3:66362881-66362900 | MS.gene80790:intron | 55.0% |
| !! | CTCCGAGGAGCTTTGTTCTG+GGG | - | chr5.3:66366003-66366022 | MS.gene80790:intron | 55.0% |
| CCGAGTGTAGCTTGGTTGGG+TGG | - | chr5.3:66363098-66363117 | MS.gene80790:intron | 60.0% | |
| GACACTCGCAAACGCGTCGT+TGG | - | chr5.3:66362451-66362470 | MS.gene80790:intron | 60.0% | |
| GAGAGGGAACACGTGGAGTC+GGG | - | chr5.3:66365890-66365909 | MS.gene80790:intron | 60.0% | |
| GGGGAGTTAGTGGCCAGGAA+GGG | + | chr5.3:66364176-66364195 | None:intergenic | 60.0% | |
| GGGTTTAGAAGGGGAAGGGG+GGG | - | chr5.3:66365688-66365707 | MS.gene80790:intron | 60.0% | |
| TGGAGTCGGGAGGGTAAACG+AGG | - | chr5.3:66365903-66365922 | MS.gene80790:intron | 60.0% | |
| !! | GCTTGGTTGGGTGGTGGGTT+TGG | - | chr5.3:66363107-66363126 | MS.gene80790:intron | 60.0% |
| AGGGAACACGTGGAGTCGGG+AGG | - | chr5.3:66365893-66365912 | MS.gene80790:intron | 65.0% | |
| GAGTGGGGGAGTTAGTGGCC+AGG | + | chr5.3:66364181-66364200 | None:intergenic | 65.0% | |
| GGGAACACGTGGAGTCGGGA+GGG | - | chr5.3:66365894-66365913 | MS.gene80790:intron | 65.0% | |
| GGGGAGAGAGAGGGAACACG+TGG | - | chr5.3:66365883-66365902 | MS.gene80790:intron | 65.0% | |
| GGGGGAGTTAGTGGCCAGGA+AGG | + | chr5.3:66364177-66364196 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 66362343 | 66366790 | 66362343 | ID=MS.gene80790 |
| chr5.3 | mRNA | 66362343 | 66366790 | 66362343 | ID=MS.gene80790.t1;Parent=MS.gene80790 |
| chr5.3 | exon | 66366604 | 66366790 | 66366604 | ID=MS.gene80790.t1.exon1;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66366604 | 66366790 | 66366604 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66366362 | 66366454 | 66366362 | ID=MS.gene80790.t1.exon2;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66366362 | 66366454 | 66366362 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66366171 | 66366252 | 66366171 | ID=MS.gene80790.t1.exon3;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66366171 | 66366252 | 66366171 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66365444 | 66365540 | 66365444 | ID=MS.gene80790.t1.exon4;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66365444 | 66365540 | 66365444 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66365195 | 66365270 | 66365195 | ID=MS.gene80790.t1.exon5;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66365195 | 66365270 | 66365195 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66363920 | 66363978 | 66363920 | ID=MS.gene80790.t1.exon6;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66363920 | 66363978 | 66363920 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66363651 | 66363773 | 66363651 | ID=MS.gene80790.t1.exon7;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66363651 | 66363773 | 66363651 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66362918 | 66362975 | 66362918 | ID=MS.gene80790.t1.exon8;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66362918 | 66362975 | 66362918 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66362739 | 66362824 | 66362739 | ID=MS.gene80790.t1.exon9;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66362739 | 66362824 | 66362739 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| chr5.3 | exon | 66362343 | 66362414 | 66362343 | ID=MS.gene80790.t1.exon10;Parent=MS.gene80790.t1 |
| chr5.3 | CDS | 66362343 | 66362414 | 66362343 | ID=cds.MS.gene80790.t1;Parent=MS.gene80790.t1 |
| Gene Sequence |
| Protein sequence |
