Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008693.t1 | XP_013460286.1 | 98.1 | 586 | 0 | 1 | 1 | 575 | 1 | 586 | 0.00E+00 | 1191 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008693.t1 | P19251 | 93.3 | 586 | 28 | 1 | 1 | 575 | 1 | 586 | 0.0e+00 | 1139.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008693.t1 | A0A072UXM4 | 98.1 | 586 | 0 | 1 | 1 | 575 | 1 | 586 | 0.0e+00 | 1191.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75475 | MS.gene008693 | PPI |
| MS.gene021114 | MS.gene008693 | PPI |
| MS.gene004045 | MS.gene008693 | PPI |
| MS.gene071169 | MS.gene008693 | PPI |
| MS.gene79217 | MS.gene008693 | PPI |
| MS.gene30955 | MS.gene008693 | PPI |
| MS.gene045117 | MS.gene008693 | PPI |
| MS.gene31156 | MS.gene008693 | PPI |
| MS.gene052207 | MS.gene008693 | PPI |
| MS.gene052122 | MS.gene008693 | PPI |
| MS.gene008693 | MS.gene41176 | PPI |
| MS.gene45489 | MS.gene008693 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008693.t1 | MTR_3g464580 | 98.123 | 586 | 0 | 1 | 1 | 575 | 1 | 586 | 0.0 | 1195 |
| MS.gene008693.t1 | MTR_3g464580 | 97.839 | 509 | 0 | 1 | 1 | 498 | 1 | 509 | 0.0 | 1039 |
| MS.gene008693.t1 | MTR_5g071360 | 84.471 | 586 | 78 | 3 | 1 | 575 | 1 | 584 | 0.0 | 1031 |
| MS.gene008693.t1 | MTR_5g071360 | 85.714 | 511 | 61 | 2 | 1 | 500 | 1 | 510 | 0.0 | 921 |
| MS.gene008693.t1 | MTR_3g464580 | 96.452 | 451 | 4 | 2 | 1 | 440 | 1 | 450 | 0.0 | 901 |
| MS.gene008693.t1 | MTR_3g087220 | 74.286 | 560 | 132 | 2 | 1 | 549 | 1 | 559 | 0.0 | 891 |
| MS.gene008693.t1 | MTR_5g069310 | 76.224 | 143 | 33 | 1 | 433 | 575 | 2 | 143 | 2.69e-70 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008693.t1 | AT3G47340 | 80.579 | 587 | 99 | 4 | 1 | 575 | 1 | 584 | 0.0 | 996 |
| MS.gene008693.t1 | AT5G10240 | 77.658 | 555 | 112 | 2 | 1 | 544 | 1 | 554 | 0.0 | 922 |
| MS.gene008693.t1 | AT5G65010 | 77.132 | 551 | 114 | 2 | 1 | 540 | 1 | 550 | 0.0 | 914 |
| MS.gene008693.t1 | AT5G10240 | 77.117 | 555 | 114 | 3 | 1 | 544 | 1 | 553 | 0.0 | 912 |
| MS.gene008693.t1 | AT5G65010 | 77.174 | 552 | 113 | 3 | 1 | 540 | 1 | 551 | 0.0 | 912 |
| MS.gene008693.t1 | AT3G47340 | 82.908 | 509 | 75 | 2 | 1 | 498 | 1 | 508 | 0.0 | 902 |
| MS.gene008693.t1 | AT3G47340 | 82.297 | 418 | 62 | 2 | 1 | 407 | 1 | 417 | 0.0 | 738 |
| MS.gene008693.t1 | AT3G47340 | 83.828 | 303 | 48 | 1 | 105 | 407 | 1 | 302 | 0.0 | 549 |
Find 132 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGCATATGTTGATTTAT+TGG | 0.113242 | 3.4:+59703248 | None:intergenic |
| CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 3.4:+59703436 | None:intergenic |
| TGAATTTCAGTTTACTATTC+AGG | 0.209606 | 3.4:-59704237 | MS.gene008693:intron |
| TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 3.4:-59704893 | MS.gene008693:CDS |
| GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 3.4:-59703498 | MS.gene008693:CDS |
| CATATGATGTAACTACAATT+AGG | 0.241861 | 3.4:-59703566 | MS.gene008693:CDS |
| TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 3.4:+59702644 | None:intergenic |
| GCCATTGTTGATCCTGCTTC+TGG | 0.252119 | 3.4:-59705494 | MS.gene008693:CDS |
| CACTTCCTTGTACATTGGTT+GGG | 0.257852 | 3.4:-59705026 | MS.gene008693:CDS |
| AGATTAGAAATTTCCATCTT+TGG | 0.261394 | 3.4:+59702128 | None:intergenic |
| CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 3.4:+59702157 | None:intergenic |
| CCAACATGGTGATAACTATT+TGG | 0.283627 | 3.4:-59705531 | MS.gene008693:CDS |
| TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 3.4:+59703406 | None:intergenic |
| CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 3.4:-59702259 | MS.gene008693:CDS |
| AAGATGGAAATTTCTAATCT+TGG | 0.303255 | 3.4:-59702125 | MS.gene008693:CDS |
| TCAAGCAACCTTGATCCTTC+TGG | 0.306690 | 3.4:-59702236 | MS.gene008693:CDS |
| TGGTTGGATTGATGGCATTA+AGG | 0.312488 | 3.4:-59702836 | MS.gene008693:CDS |
| TGTTGTTAGTATGAGGAGTA+TGG | 0.325278 | 3.4:-59705145 | MS.gene008693:intron |
| GATTACAGGCTGTGATAAAA+AGG | 0.326265 | 3.4:-59704591 | MS.gene008693:intron |
| TCAGCAAGGCTAACGGTTCC+TGG | 0.326698 | 3.4:-59702314 | MS.gene008693:CDS |
| TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 3.4:+59703426 | None:intergenic |
| TGGAGGTTTGGATTCTTCAT+TGG | 0.339121 | 3.4:-59704533 | MS.gene008693:CDS |
| CTACTTCTCTTCCAGCCTTA+AGG | 0.348738 | 3.4:+59704285 | None:intergenic |
| ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 3.4:+59702143 | None:intergenic |
| TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 3.4:-59704913 | MS.gene008693:intron |
| CATTGATCCTGAGTACAAAA+TGG | 0.374006 | 3.4:-59703169 | MS.gene008693:intron |
| CTCATTCTGTGTAGGACTTA+AGG | 0.378447 | 3.4:-59704443 | MS.gene008693:intron |
| TTGTTGCGAGGGATGCTATA+GGG | 0.380417 | 3.4:-59705051 | MS.gene008693:CDS |
| TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 3.4:-59705349 | MS.gene008693:intron |
| GTTGGCTATGGTTGGATTGA+TGG | 0.383418 | 3.4:-59702844 | MS.gene008693:CDS |
| TACATTGGTTGGGGACTAGA+TGG | 0.386232 | 3.4:-59705016 | MS.gene008693:intron |
| CACAAAAGCTGCTAAGCAAT+GGG | 0.391623 | 3.4:-59704479 | MS.gene008693:CDS |
| CTCAAAACTAGAGGATCATA+AGG | 0.403123 | 3.4:+59704746 | None:intergenic |
| CCTTCTGGAAGAGCAGCATT+TGG | 0.406608 | 3.4:-59702221 | MS.gene008693:CDS |
| TCACTTCCTTGTACATTGGT+TGG | 0.408558 | 3.4:-59705027 | MS.gene008693:CDS |
| TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 3.4:+59705289 | None:intergenic |
| TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 3.4:-59703509 | MS.gene008693:CDS |
| TTAGGGTGCACCTGACCTTA+AGG | 0.420678 | 3.4:-59704300 | MS.gene008693:intron |
| ATATGATGTAACTACAATTA+GGG | 0.426432 | 3.4:-59703565 | MS.gene008693:CDS |
| AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 3.4:-59702141 | MS.gene008693:CDS |
| TGCAGATCAAAGCTCTTCAT+AGG | 0.436093 | 3.4:-59703287 | MS.gene008693:intron |
| TGGTGGAGCCCACTCCAATC+TGG | 0.436866 | 3.4:+59705551 | None:intergenic |
| AAGAAGGAAGAATTGAGAAA+TGG | 0.439977 | 3.4:-59703050 | MS.gene008693:CDS |
| AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 3.4:-59703451 | MS.gene008693:CDS |
| AGAGGATCATAAGGGGTTGT+TGG | 0.444662 | 3.4:+59704755 | None:intergenic |
| TGTGGTATACTTGCTGTACT+TGG | 0.453089 | 3.4:-59706624 | MS.gene008693:CDS |
| TTGAGTACCTTAGGAAGGTA+AGG | 0.458332 | 3.4:+59702994 | None:intergenic |
| GGGGTCACTTCCTTGTACAT+TGG | 0.460121 | 3.4:-59705031 | MS.gene008693:CDS |
| TCAAAACTAGAGGATCATAA+GGG | 0.460214 | 3.4:+59704747 | None:intergenic |
| TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 3.4:+59702097 | None:intergenic |
| ATTGTTGCGAGGGATGCTAT+AGG | 0.464075 | 3.4:-59705052 | MS.gene008693:CDS |
| TCTCTTCCAGCCTTAAGGTC+AGG | 0.474929 | 3.4:+59704290 | None:intergenic |
| ACTTCCTTGTACATTGGTTG+GGG | 0.475172 | 3.4:-59705025 | MS.gene008693:CDS |
| GAATTGAGAAATGGATACTA+AGG | 0.475694 | 3.4:-59703041 | MS.gene008693:CDS |
| TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 3.4:+59702651 | None:intergenic |
| TCTCGAAAGATCAAATCATC+AGG | 0.483191 | 3.4:-59703519 | MS.gene008693:CDS |
| CTGTGATGTTATTGCACACC+TGG | 0.486927 | 3.4:-59705260 | MS.gene008693:intron |
| GTTCAGATAAAACATGAAGA+AGG | 0.491067 | 3.4:-59703066 | MS.gene008693:intron |
| GCACAAAAGCTGCTAAGCAA+TGG | 0.493861 | 3.4:-59704480 | MS.gene008693:CDS |
| TGAAGCACCGTGGTCCAGAT+TGG | 0.494451 | 3.4:-59705565 | MS.gene008693:intron |
| CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 3.4:-59703508 | MS.gene008693:CDS |
| TTGGTAAGTGGAGTGTTGAA+AGG | 0.504831 | 3.4:+59702663 | None:intergenic |
| CTGCTCTTCCAGAAGGATCA+AGG | 0.507380 | 3.4:+59702228 | None:intergenic |
| CAATAAATCAACATATGCAT+GGG | 0.509465 | 3.4:-59703247 | MS.gene008693:CDS |
| AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 3.4:-59704811 | MS.gene008693:CDS |
| GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 3.4:-59704892 | MS.gene008693:CDS |
| GTGATGGAGTTGGCTATGGT+TGG | 0.516816 | 3.4:-59702852 | MS.gene008693:CDS |
| CTGATGACTCACAAGCTAAG+AGG | 0.518775 | 3.4:-59706596 | MS.gene008693:CDS |
| TCTACAATCATGAAGACCTC+AGG | 0.520006 | 3.4:-59705321 | MS.gene008693:CDS |
| TTCAGTGATGGAGTTGGCTA+TGG | 0.523214 | 3.4:-59702856 | MS.gene008693:CDS |
| ATAACTATTTGGCTCATCAA+AGG | 0.530780 | 3.4:-59705520 | MS.gene008693:CDS |
| AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 3.4:+59705482 | None:intergenic |
| ACTTGTACTCGAGCAAAGAC+CGG | 0.535273 | 3.4:-59704826 | MS.gene008693:CDS |
| CTTGTACTCGAGCAAAGACC+GGG | 0.536345 | 3.4:-59704825 | MS.gene008693:CDS |
| CAACAGTTTCATTGTTGCGA+GGG | 0.541209 | 3.4:-59705062 | MS.gene008693:CDS |
| GGTGCACCTGACCTTAAGGC+TGG | 0.541650 | 3.4:-59704296 | MS.gene008693:CDS |
| AGCAGTCACTGCTAGATACC+TGG | 0.543495 | 3.4:-59704506 | MS.gene008693:CDS |
| TAGTAAACTGAAATTCATGA+TGG | 0.544517 | 3.4:+59704243 | None:intergenic |
| AATAGTTATCACCATGTTGG+TGG | 0.545301 | 3.4:+59705534 | None:intergenic |
| CTATTTGGCTCATCAAAGGT+TGG | 0.547801 | 3.4:-59705516 | MS.gene008693:CDS |
| CCAATAAATCAACATATGCA+TGG | 0.548770 | 3.4:-59703248 | MS.gene008693:CDS |
| AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 3.4:-59703492 | MS.gene008693:CDS |
| CAGAAGGAACAGTTCAGTGA+TGG | 0.554559 | 3.4:-59702868 | MS.gene008693:CDS |
| CCAAATGCTGCTCTTCCAGA+AGG | 0.561506 | 3.4:+59702221 | None:intergenic |
| AAATTACACTCATTCTGTGT+AGG | 0.565107 | 3.4:-59704451 | MS.gene008693:CDS |
| GGATTTCATCAAAGTTGCAA+TGG | 0.568271 | 3.4:-59703193 | MS.gene008693:CDS |
| AGAGAATCCTTACCTTCCTA+AGG | 0.568467 | 3.4:-59703001 | MS.gene008693:intron |
| TTTCGAGACATCAGAAACAT+AGG | 0.569570 | 3.4:+59703534 | None:intergenic |
| TTTGAGGAACGCCTTTGAGA+AGG | 0.571044 | 3.4:-59704729 | MS.gene008693:intron |
| CATCACAGTCACATTGTGTA+CGG | 0.573999 | 3.4:+59705275 | None:intergenic |
| TGATGACTCACAAGCTAAGA+GGG | 0.575223 | 3.4:-59706595 | MS.gene008693:intron |
| TGTTGCGAGGGATGCTATAG+GGG | 0.583881 | 3.4:-59705050 | MS.gene008693:CDS |
| ACCGTGGTCCAGATTGGAGT+GGG | 0.584195 | 3.4:-59705559 | MS.gene008693:CDS |
| ACTATAGAATGATCTTTGAG+AGG | 0.584236 | 3.4:-59702629 | MS.gene008693:CDS |
| CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 3.4:+59702296 | None:intergenic |
| GAACAGTTCAGTGATGGAGT+TGG | 0.592459 | 3.4:-59702862 | MS.gene008693:CDS |
| TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 3.4:-59704568 | MS.gene008693:CDS |
| TAGAGTTGAGTACCTTAGGA+AGG | 0.599420 | 3.4:+59702989 | None:intergenic |
| CCAAATAGTTATCACCATGT+TGG | 0.601085 | 3.4:+59705531 | None:intergenic |
| TCGATTTGTAGAACTCAGCA+AGG | 0.601528 | 3.4:-59702328 | MS.gene008693:intron |
| GGATGGCATAGATGCAATTG+AGG | 0.606055 | 3.4:-59703610 | MS.gene008693:CDS |
| TAGTCCCCAACCAATGTACA+AGG | 0.608478 | 3.4:+59705021 | None:intergenic |
| CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 3.4:-59702270 | MS.gene008693:CDS |
| GTAGAACTCAGCAAGGCTAA+CGG | 0.609016 | 3.4:-59702321 | MS.gene008693:intron |
| GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 3.4:-59702271 | MS.gene008693:CDS |
| GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 3.4:+59705464 | None:intergenic |
| AGACAAATCTATTATTGTCA+CGG | 0.614131 | 3.4:-59705450 | MS.gene008693:intron |
| TGTACCATCTACGAAACTCC+CGG | 0.614554 | 3.4:+59704807 | None:intergenic |
| GATTAGGCAATTGTTTCCTG+AGG | 0.616657 | 3.4:+59705305 | None:intergenic |
| TGAGAAATGGATACTAAGGA+AGG | 0.617704 | 3.4:-59703037 | MS.gene008693:CDS |
| GTCACTGCTAGATACCTGGC+TGG | 0.621089 | 3.4:-59704502 | MS.gene008693:CDS |
| TCTTTGATCATCACAATGTG+TGG | 0.626178 | 3.4:-59706642 | None:intergenic |
| TGTGAATCTTACCTTCTCAA+AGG | 0.629969 | 3.4:+59704718 | None:intergenic |
| TGGAGTGGGCTCCACCAACA+TGG | 0.631779 | 3.4:-59705545 | MS.gene008693:CDS |
| AAGGCGTTCCTCAAAACTAG+AGG | 0.639779 | 3.4:+59704737 | None:intergenic |
| ACAACAGTTTCATTGTTGCG+AGG | 0.640177 | 3.4:-59705063 | MS.gene008693:CDS |
| CACCGTGGTCCAGATTGGAG+TGG | 0.641426 | 3.4:-59705560 | MS.gene008693:CDS |
| TTGCTCGAGTACAAGTGACC+AGG | 0.642279 | 3.4:+59704833 | None:intergenic |
| CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 3.4:+59704553 | None:intergenic |
| CTCGAGTACAAGTGACCAGG+TGG | 0.647322 | 3.4:+59704836 | None:intergenic |
| GCCCACTCCAATCTGGACCA+CGG | 0.649014 | 3.4:+59705558 | None:intergenic |
| CAATCCTCCGTGGTTCAATG+AGG | 0.653887 | 3.4:-59704786 | MS.gene008693:CDS |
| TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 3.4:-59703409 | MS.gene008693:intron |
| CAAAACTAGAGGATCATAAG+GGG | 0.656036 | 3.4:+59704748 | None:intergenic |
| ACCAGAAGCAGGATCAACAA+TGG | 0.662855 | 3.4:+59705493 | None:intergenic |
| AATAAATCAACATATGCATG+GGG | 0.691237 | 3.4:-59703246 | MS.gene008693:CDS |
| ACAAAAGCTGCTAAGCAATG+GGG | 0.694915 | 3.4:-59704478 | MS.gene008693:CDS |
| ATAATAGCCTCATTGAACCA+CGG | 0.694926 | 3.4:+59704779 | None:intergenic |
| GTAGATGGTACAATCCTCCG+TGG | 0.707926 | 3.4:-59704796 | MS.gene008693:CDS |
| GCAAGGCTAACGGTTCCTGG+AGG | 0.726931 | 3.4:-59702311 | MS.gene008693:CDS |
| ATAGCCTCATTGAACCACGG+AGG | 0.797295 | 3.4:+59704782 | None:intergenic |
| TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 3.4:-59705575 | MS.gene008693:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAAAACTCT+AGG | + | chr3.4:59702335-59702354 | None:intergenic | 10.0% |
| !! | AATACTAATTAATACATATA+TGG | - | chr3.4:59702530-59702549 | MS.gene008693:intron | 10.0% |
| !! | ATATAATTATCCATTTATAT+TGG | - | chr3.4:59702749-59702768 | MS.gene008693:intron | 10.0% |
| !! | TACTTATTAATTATTCTAAT+TGG | + | chr3.4:59703080-59703099 | None:intergenic | 10.0% |
| !! | TATAATTATCCATTTATATT+GGG | - | chr3.4:59702750-59702769 | MS.gene008693:intron | 10.0% |
| !! | TATATGGATATAATATAATA+TGG | - | chr3.4:59702546-59702565 | MS.gene008693:intron | 10.0% |
| !!! | ACATTTTTTATACTATAAAA+TGG | - | chr3.4:59703344-59703363 | MS.gene008693:intron | 10.0% |
| !!! | TAAATTTTATCATAAAATTC+AGG | - | chr3.4:59703377-59703396 | MS.gene008693:intron | 10.0% |
| !!! | TATAATTCTCTTTAAAATAT+TGG | + | chr3.4:59702715-59702734 | None:intergenic | 10.0% |
| !! | AACTATAGAATATTATTACA+AGG | + | chr3.4:59703320-59703339 | None:intergenic | 15.0% |
| !! | CAAATTAAATTTGCAAATTA+TGG | + | chr3.4:59705795-59705814 | None:intergenic | 15.0% |
| !! | GAATAATTAATAAGTAACTT+TGG | - | chr3.4:59703084-59703103 | MS.gene008693:intron | 15.0% |
| !!! | AAAATATTTTGGTTTTAAGA+GGG | - | chr3.4:59702490-59702509 | MS.gene008693:intron | 15.0% |
| !!! | AAAGGGTATATTTATATAAA+AGG | + | chr3.4:59702238-59702257 | None:intergenic | 15.0% |
| !!! | ACATTTTTATAATATCATAG+GGG | - | chr3.4:59705045-59705064 | MS.gene008693:CDS | 15.0% |
| !!! | ATTGCTTTAATCTTTATTTA+TGG | - | chr3.4:59704402-59704421 | MS.gene008693:intron | 15.0% |
| !!! | CACATTTTTATAATATCATA+GGG | - | chr3.4:59705044-59705063 | MS.gene008693:CDS | 15.0% |
| !!! | GGTTTTTTATTTTTTTCAAA+TGG | + | chr3.4:59702690-59702709 | None:intergenic | 15.0% |
| !!! | TTTATATAAATATACCCTTT+TGG | - | chr3.4:59702238-59702257 | MS.gene008693:CDS | 15.0% |
| !!! | TTTATTTTAATAAATCACGT+GGG | - | chr3.4:59703022-59703041 | MS.gene008693:CDS | 15.0% |
| !!! | TTTTATTTTAATAAATCACG+TGG | - | chr3.4:59703021-59703040 | MS.gene008693:CDS | 15.0% |
| !! | AAAATAAAAATTCCACATGT+AGG | + | chr3.4:59703010-59703029 | None:intergenic | 20.0% |
| !! | AAATATCAAAGTTAACCAAA+AGG | + | chr3.4:59702256-59702275 | None:intergenic | 20.0% |
| !! | AATAAACAAAAGTAAGACAT+GGG | - | chr3.4:59702903-59702922 | MS.gene008693:intron | 20.0% |
| !! | AATATCAAAGTTAACCAAAA+GGG | + | chr3.4:59702255-59702274 | None:intergenic | 20.0% |
| !! | ATATGATGTAACTACAATTA+GGG | - | chr3.4:59705168-59705187 | MS.gene008693:intron | 20.0% |
| !!! | AATGGAAGTTCAAAATATTT+TGG | - | chr3.4:59702479-59702498 | MS.gene008693:intron | 20.0% |
| !!! | ATGGAAAAAAAATTTGTTCA+AGG | - | chr3.4:59704372-59704391 | MS.gene008693:intron | 20.0% |
| !!! | ATTCTCTTTAAAATATTGGA+TGG | + | chr3.4:59702711-59702730 | None:intergenic | 20.0% |
| !!! | ATTGTCTAAATTTTATCAGA+CGG | + | chr3.4:59704054-59704073 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTGGTTTTAAG+AGG | - | chr3.4:59702489-59702508 | MS.gene008693:intron | 20.0% |
| !!! | CATTTTTATAATATCATAGG+GGG | - | chr3.4:59705046-59705065 | MS.gene008693:CDS | 20.0% |
| !!! | GAGTTTTTATTATTTTGATG+AGG | - | chr3.4:59702445-59702464 | MS.gene008693:intron | 20.0% |
| !!! | GCACATTTTTATAATATCAT+AGG | - | chr3.4:59705043-59705062 | MS.gene008693:CDS | 20.0% |
| !!! | GTGGATTATTAGTTTTTTAA+TGG | - | chr3.4:59704353-59704372 | MS.gene008693:intron | 20.0% |
| !!! | TAATTTTTGTTGTTAGTATG+AGG | - | chr3.4:59703581-59703600 | MS.gene008693:CDS | 20.0% |
| !!! | TATTTATGGTATGTTGATTA+GGG | - | chr3.4:59704416-59704435 | MS.gene008693:intron | 20.0% |
| !!! | TGTTATTTTGATGCAATAAT+TGG | - | chr3.4:59702933-59702952 | MS.gene008693:intron | 20.0% |
| !!! | TTATTTATGGTATGTTGATT+AGG | - | chr3.4:59704415-59704434 | MS.gene008693:intron | 20.0% |
| !!! | TTCTTGAAATTTTTTCGTAT+AGG | - | chr3.4:59706009-59706028 | MS.gene008693:intron | 20.0% |
| !!! | TTTTTCAAATGGCAAAATAT+TGG | + | chr3.4:59702679-59702698 | None:intergenic | 20.0% |
| ! | AAGATGGAAATTTCTAATCT+TGG | - | chr3.4:59706608-59706627 | MS.gene008693:CDS | 25.0% |
| ! | AATAAATCAACATATGCATG+GGG | - | chr3.4:59705487-59705506 | MS.gene008693:CDS | 25.0% |
| ! | ACCAAAATCAATAACATTCA+TGG | + | chr3.4:59703562-59703581 | None:intergenic | 25.0% |
| ! | AGACAAATCTATTATTGTCA+CGG | - | chr3.4:59703283-59703302 | MS.gene008693:CDS | 25.0% |
| ! | AGATTAGAAATTTCCATCTT+TGG | + | chr3.4:59706608-59706627 | None:intergenic | 25.0% |
| ! | ATAAACAAAAGTAAGACATG+GGG | - | chr3.4:59702904-59702923 | MS.gene008693:intron | 25.0% |
| ! | ATGACACACATTACATAATT+TGG | - | chr3.4:59702860-59702879 | MS.gene008693:CDS | 25.0% |
| ! | ATTTGATTAGGCCTTTATTA+AGG | + | chr3.4:59706376-59706395 | None:intergenic | 25.0% |
| ! | CAATAAATCAACATATGCAT+GGG | - | chr3.4:59705486-59705505 | MS.gene008693:CDS | 25.0% |
| ! | CATATGATGTAACTACAATT+AGG | - | chr3.4:59705167-59705186 | MS.gene008693:intron | 25.0% |
| ! | GAATAAACAAAAGTAAGACA+TGG | - | chr3.4:59702902-59702921 | MS.gene008693:intron | 25.0% |
| ! | GATAAGTGATATACAACTAA+AGG | - | chr3.4:59702594-59702613 | MS.gene008693:intron | 25.0% |
| ! | TAATTATTGCTAACGAGTTA+GGG | - | chr3.4:59706183-59706202 | MS.gene008693:intron | 25.0% |
| ! | TAGAAAAATCACCAAAATGA+TGG | - | chr3.4:59702621-59702640 | MS.gene008693:CDS | 25.0% |
| ! | TAGTAAACTGAAATTCATGA+TGG | + | chr3.4:59704493-59704512 | None:intergenic | 25.0% |
| ! | TATAAGGTTTACAAGCTTAT+GGG | - | chr3.4:59702362-59702381 | MS.gene008693:intron | 25.0% |
| ! | TATCATAAAATTCAGGTGAA+TGG | - | chr3.4:59703384-59703403 | MS.gene008693:intron | 25.0% |
| ! | TATTGCATCAAAATAACATG+TGG | + | chr3.4:59702931-59702950 | None:intergenic | 25.0% |
| ! | TGAAACTGAAAAGAAAATGT+TGG | + | chr3.4:59705952-59705971 | None:intergenic | 25.0% |
| ! | TGAATTTCAGTTTACTATTC+AGG | - | chr3.4:59704496-59704515 | MS.gene008693:CDS | 25.0% |
| ! | TGACACACATTACATAATTT+GGG | - | chr3.4:59702861-59702880 | MS.gene008693:CDS | 25.0% |
| ! | TTATAAGGTTTACAAGCTTA+TGG | - | chr3.4:59702361-59702380 | MS.gene008693:intron | 25.0% |
| ! | TTGGACTTTATGTATATGAA+CGG | + | chr3.4:59703061-59703080 | None:intergenic | 25.0% |
| !! | GAATCAAAAATCAATTTTCG+TGG | - | chr3.4:59704334-59704353 | MS.gene008693:intron | 25.0% |
| !! | TGAATAATTTGTGACAAGTT+TGG | - | chr3.4:59703790-59703809 | MS.gene008693:intron | 25.0% |
| !! | TTTTGATGCAATAATTGGTT+CGG | - | chr3.4:59702938-59702957 | MS.gene008693:intron | 25.0% |
| !!! | AAATTAATTTGTCCTACATG+TGG | - | chr3.4:59702995-59703014 | MS.gene008693:intron | 25.0% |
| !!! | ACAATTCTCACTTTTTAAGT+CGG | - | chr3.4:59704069-59704088 | MS.gene008693:intron | 25.0% |
| !!! | ACCATGAATGTTATTGATTT+TGG | - | chr3.4:59703558-59703577 | MS.gene008693:CDS | 25.0% |
| !!! | TCTTTTTCGTTGATTTTGTT+GGG | + | chr3.4:59702971-59702990 | None:intergenic | 25.0% |
| !!! | TTCATTTTACTTTTGTTGCA+AGG | - | chr3.4:59705968-59705987 | MS.gene008693:intron | 25.0% |
| !!! | TTTATTTTTGTGGTCTATGT+AGG | - | chr3.4:59705102-59705121 | MS.gene008693:CDS | 25.0% |
| AAACATACTTGACTTTGACA+AGG | - | chr3.4:59702824-59702843 | MS.gene008693:CDS | 30.0% | |
| AAATTACACTCATTCTGTGT+AGG | - | chr3.4:59704282-59704301 | MS.gene008693:CDS | 30.0% | |
| AAGAAGGAAGAATTGAGAAA+TGG | - | chr3.4:59705683-59705702 | MS.gene008693:intron | 30.0% | |
| ACAACTGAAAGATAAGCATT+GGG | + | chr3.4:59702777-59702796 | None:intergenic | 30.0% | |
| AGAGAAGATTATACCAAAGA+TGG | - | chr3.4:59706592-59706611 | MS.gene008693:intron | 30.0% | |
| ATCTTTGGTATAATCTTCTC+TGG | + | chr3.4:59706593-59706612 | None:intergenic | 30.0% | |
| ATGAAATCCTTGTCCAAAAA+TGG | + | chr3.4:59705529-59705548 | None:intergenic | 30.0% | |
| CCAATAAATCAACATATGCA+TGG | - | chr3.4:59705485-59705504 | MS.gene008693:CDS | 30.0% | |
| CTCAAAATTGCAAAAAGTTG+CGG | - | chr3.4:59704681-59704700 | MS.gene008693:intron | 30.0% | |
| CTTGTAACTACTAGTAGTTT+AGG | - | chr3.4:59702799-59702818 | MS.gene008693:intron | 30.0% | |
| GAATTGAGAAATGGATACTA+AGG | - | chr3.4:59705692-59705711 | MS.gene008693:intron | 30.0% | |
| GGATTGCATCAGAATTAAAA+GGG | - | chr3.4:59703841-59703860 | MS.gene008693:intron | 30.0% | |
| GGTAAAAAAGAGTTTGATCA+TGG | + | chr3.4:59702314-59702333 | None:intergenic | 30.0% | |
| GGTAATAGAACTACATTACA+TGG | - | chr3.4:59705345-59705364 | MS.gene008693:intron | 30.0% | |
| GTAATTATTGCTAACGAGTT+AGG | - | chr3.4:59706182-59706201 | MS.gene008693:intron | 30.0% | |
| GTTCAGATAAAACATGAAGA+AGG | - | chr3.4:59705667-59705686 | MS.gene008693:intron | 30.0% | |
| TAATATGCTTCTTTGGTAAG+TGG | + | chr3.4:59706085-59706104 | None:intergenic | 30.0% | |
| TACAACTGAAAGATAAGCAT+TGG | + | chr3.4:59702778-59702797 | None:intergenic | 30.0% | |
| TCAAAACTAGAGGATCATAA+GGG | + | chr3.4:59703989-59704008 | None:intergenic | 30.0% | |
| TCAAAATTGCGAAAAGATGT+GGG | - | chr3.4:59704551-59704570 | MS.gene008693:CDS | 30.0% | |
| TGATTGATTAAGTTACCTGA+GGG | + | chr3.4:59706135-59706154 | None:intergenic | 30.0% | |
| TGGACTTTATGTATATGAAC+GGG | + | chr3.4:59703060-59703079 | None:intergenic | 30.0% | |
| TGGATTGCATCAGAATTAAA+AGG | - | chr3.4:59703840-59703859 | MS.gene008693:intron | 30.0% | |
| TTGATTGATTAAGTTACCTG+AGG | + | chr3.4:59706136-59706155 | None:intergenic | 30.0% | |
| ! | AATGTAGTTCTATTACCTTG+CGG | + | chr3.4:59705342-59705361 | None:intergenic | 30.0% |
| ! | AGAAAATTTTGTGGACATGT+TGG | - | chr3.4:59703611-59703630 | MS.gene008693:CDS | 30.0% |
| ! | AGGGTATTTGTATTTCCATA+AGG | - | chr3.4:59705282-59705301 | MS.gene008693:CDS | 30.0% |
| ! | ATAACTATTTGGCTCATCAA+AGG | - | chr3.4:59703213-59703232 | MS.gene008693:CDS | 30.0% |
| ! | TATCATACCATTTTGTACTC+AGG | + | chr3.4:59705574-59705593 | None:intergenic | 30.0% |
| ! | TATCTTTTCATTTGTTCTGC+TGG | - | chr3.4:59703638-59703657 | MS.gene008693:intron | 30.0% |
| ! | TCATGCAGCACATTTTATAT+AGG | - | chr3.4:59705842-59705861 | MS.gene008693:intron | 30.0% |
| ! | TTGTTATTGTAGGTTCTGTT+TGG | - | chr3.4:59703820-59703839 | MS.gene008693:intron | 30.0% |
| !! | CCATGCATATGTTGATTTAT+TGG | + | chr3.4:59705488-59705507 | None:intergenic | 30.0% |
| !! | TTATTTGAGTTTTCCTCTCT+GGG | - | chr3.4:59706221-59706240 | MS.gene008693:intron | 30.0% |
| !!! | CTCTTTTTCGTTGATTTTGT+TGG | + | chr3.4:59702972-59702991 | None:intergenic | 30.0% |
| AAAGTAGAGTTGAGTACCTT+AGG | + | chr3.4:59705751-59705770 | None:intergenic | 35.0% | |
| AATAGTTATCACCATGTTGG+TGG | + | chr3.4:59703202-59703221 | None:intergenic | 35.0% | |
| AGTGGTTGTGATTGATATCA+AGG | - | chr3.4:59702385-59702404 | MS.gene008693:intron | 35.0% | |
| ATAAATTCTGAGTGACACCA+AGG | + | chr3.4:59704758-59704777 | None:intergenic | 35.0% | |
| ATAATAGCCTCATTGAACCA+CGG | + | chr3.4:59703957-59703976 | None:intergenic | 35.0% | |
| ATTACATGGCTCATGTTTGA+AGG | - | chr3.4:59705359-59705378 | MS.gene008693:intron | 35.0% | |
| CAAAAAGTTGCGGTCTAATA+GGG | - | chr3.4:59704691-59704710 | MS.gene008693:intron | 35.0% | |
| CAAAACTAGAGGATCATAAG+GGG | + | chr3.4:59703988-59704007 | None:intergenic | 35.0% | |
| CAAATCATCAGGAGTCAAAT+GGG | - | chr3.4:59705225-59705244 | MS.gene008693:intron | 35.0% | |
| CATTGATCCTGAGTACAAAA+TGG | - | chr3.4:59705564-59705583 | MS.gene008693:intron | 35.0% | |
| CCAAATAGTTATCACCATGT+TGG | + | chr3.4:59703205-59703224 | None:intergenic | 35.0% | |
| CCAACATGGTGATAACTATT+TGG | - | chr3.4:59703202-59703221 | MS.gene008693:CDS | 35.0% | |
| CGAAAAGTTGCAGTCAAATA+GGG | - | chr3.4:59704951-59704970 | MS.gene008693:intron | 35.0% | |
| CGAAACACAGAGATTTGATT+AGG | + | chr3.4:59706388-59706407 | None:intergenic | 35.0% | |
| CTCAAAACTAGAGGATCATA+AGG | + | chr3.4:59703990-59704009 | None:intergenic | 35.0% | |
| CTCAAAATTGCGAAAAGATG+TGG | - | chr3.4:59704550-59704569 | MS.gene008693:CDS | 35.0% | |
| GATGAGGAAGAATGAAAGAA+TGG | - | chr3.4:59702461-59702480 | MS.gene008693:intron | 35.0% | |
| GATTACAGGCTGTGATAAAA+AGG | - | chr3.4:59704142-59704161 | MS.gene008693:intron | 35.0% | |
| GATTTGTCTTCATTGAAGAG+AGG | + | chr3.4:59703272-59703291 | None:intergenic | 35.0% | |
| GCAATAATTACAATGTCGCT+TGG | + | chr3.4:59706173-59706192 | None:intergenic | 35.0% | |
| GGACAGAAATTGCAGTAAAT+GGG | + | chr3.4:59705774-59705793 | None:intergenic | 35.0% | |
| GGATTTCATCAAAGTTGCAA+TGG | - | chr3.4:59705540-59705559 | MS.gene008693:CDS | 35.0% | |
| TCAAATCATCAGGAGTCAAA+TGG | - | chr3.4:59705224-59705243 | MS.gene008693:intron | 35.0% | |
| TCTCGAAAGATCAAATCATC+AGG | - | chr3.4:59705214-59705233 | MS.gene008693:intron | 35.0% | |
| TGAGAAATGGATACTAAGGA+AGG | - | chr3.4:59705696-59705715 | MS.gene008693:intron | 35.0% | |
| TGAGAAGGTAAGATTCACAT+CGG | - | chr3.4:59704019-59704038 | MS.gene008693:intron | 35.0% | |
| TGATGTCACAGTCTGAATTT+GGG | - | chr3.4:59704887-59704906 | MS.gene008693:CDS | 35.0% | |
| TGGACAGAAATTGCAGTAAA+TGG | + | chr3.4:59705775-59705794 | None:intergenic | 35.0% | |
| TGGTGAAACTCTTCTTTGTT+TGG | + | chr3.4:59705310-59705329 | None:intergenic | 35.0% | |
| TGTGAATCTTACCTTCTCAA+AGG | + | chr3.4:59704018-59704037 | None:intergenic | 35.0% | |
| TGTGTACGGAATTTGTGATT+AGG | + | chr3.4:59703447-59703466 | None:intergenic | 35.0% | |
| TGTTGTTAGTATGAGGAGTA+TGG | - | chr3.4:59703588-59703607 | MS.gene008693:CDS | 35.0% | |
| TTGATGTCACAGTCTGAATT+TGG | - | chr3.4:59704886-59704905 | MS.gene008693:CDS | 35.0% | |
| TTTCGAGACATCAGAAACAT+AGG | + | chr3.4:59705202-59705221 | None:intergenic | 35.0% | |
| ! | AATTTTGTGGACATGTTGGA+TGG | - | chr3.4:59703615-59703634 | MS.gene008693:intron | 35.0% |
| ! | AGAGAAGTAGCAGACTTTTT+AGG | - | chr3.4:59704461-59704480 | MS.gene008693:CDS | 35.0% |
| ! | ATCACTAAGCACCATCATTT+TGG | + | chr3.4:59702635-59702654 | None:intergenic | 35.0% |
| ! | CAACTGAAAGATAAGCATTG+GGG | + | chr3.4:59702776-59702795 | None:intergenic | 35.0% |
| ! | GAAGGATCTGATGAGATTTT+TGG | - | chr3.4:59705259-59705278 | MS.gene008693:intron | 35.0% |
| ! | GCACATTTTATATAGGCAGA+AGG | - | chr3.4:59705849-59705868 | MS.gene008693:intron | 35.0% |
| ! | GGAGTATGGAGAAAATTTTG+TGG | - | chr3.4:59703602-59703621 | MS.gene008693:CDS | 35.0% |
| ! | TGTTTACATGTTTTGCAGCA+TGG | + | chr3.4:59705924-59705943 | None:intergenic | 35.0% |
| ! | TGTTTTACTATCTGGAGGTT+TGG | - | chr3.4:59704188-59704207 | MS.gene008693:intron | 35.0% |
| ! | TTTTTGTGGTCTATGTAGGA+TGG | - | chr3.4:59705106-59705125 | MS.gene008693:CDS | 35.0% |
| !! | AGAAGCTAGAGTACCATTTT+TGG | - | chr3.4:59705513-59705532 | MS.gene008693:CDS | 35.0% |
| !! | CTTATTTGAGTTTTCCTCTC+TGG | - | chr3.4:59706220-59706239 | MS.gene008693:intron | 35.0% |
| !! | GATCTGATGAGATTTTTGGA+GGG | - | chr3.4:59705263-59705282 | MS.gene008693:CDS | 35.0% |
| !! | TAGAGTACCATTTTTGGACA+AGG | - | chr3.4:59705519-59705538 | MS.gene008693:CDS | 35.0% |
| !!! | CATTTTGAAGTTTTTCCACC+TGG | - | chr3.4:59703882-59703901 | MS.gene008693:intron | 35.0% |
| !!! | CTTATGATCCTCTAGTTTTG+AGG | - | chr3.4:59703988-59704007 | MS.gene008693:intron | 35.0% |
| !!! | CTTTTTAAGTCGGTTCTGTA+AGG | - | chr3.4:59704079-59704098 | MS.gene008693:intron | 35.0% |
| !!! | TGGCACGTTTTTGTTATTGT+AGG | - | chr3.4:59703810-59703829 | MS.gene008693:intron | 35.0% |
| ACAAAAGCTGCTAAGCAATG+GGG | - | chr3.4:59704255-59704274 | MS.gene008693:CDS | 40.0% | |
| ACAACAGTTTCATTGTTGCG+AGG | - | chr3.4:59703670-59703689 | MS.gene008693:intron | 40.0% | |
| ACGAAAAGTCGCTGTCAAAT+AGG | - | chr3.4:59704819-59704838 | MS.gene008693:CDS | 40.0% | |
| AGAGAATCCTTACCTTCCTA+AGG | - | chr3.4:59705732-59705751 | MS.gene008693:intron | 40.0% | |
| CAACAGTTTCATTGTTGCGA+GGG | - | chr3.4:59703671-59703690 | MS.gene008693:intron | 40.0% | |
| CACAAAAGCTGCTAAGCAAT+GGG | - | chr3.4:59704254-59704273 | MS.gene008693:CDS | 40.0% | |
| CACAGAGAAAGCTATTGAGT+GGG | - | chr3.4:59706463-59706482 | MS.gene008693:intron | 40.0% | |
| CATCACAGTCACATTGTGTA+CGG | + | chr3.4:59703461-59703480 | None:intergenic | 40.0% | |
| CATGCAGACATCAAAAACCT+TGG | - | chr3.4:59704738-59704757 | MS.gene008693:CDS | 40.0% | |
| CCAGATAGTAAAACACCGAA+CGG | + | chr3.4:59704183-59704202 | None:intergenic | 40.0% | |
| CGAAAAGATGTGGGCAAATA+GGG | - | chr3.4:59704560-59704579 | MS.gene008693:CDS | 40.0% | |
| CGAAAAGTCGCTGTCAAATA+GGG | - | chr3.4:59704820-59704839 | MS.gene008693:CDS | 40.0% | |
| CTCATTCTGTGTAGGACTTA+AGG | - | chr3.4:59704290-59704309 | MS.gene008693:CDS | 40.0% | |
| GATTAGGCAATTGTTTCCTG+AGG | + | chr3.4:59703431-59703450 | None:intergenic | 40.0% | |
| GCAAAAAGTTGCGGTCTAAT+AGG | - | chr3.4:59704690-59704709 | MS.gene008693:intron | 40.0% | |
| GCGAAAAGTTGCAGTCAAAT+AGG | - | chr3.4:59704950-59704969 | MS.gene008693:intron | 40.0% | |
| TAGAGTTGAGTACCTTAGGA+AGG | + | chr3.4:59705747-59705766 | None:intergenic | 40.0% | |
| TCACAGCCTGTAATCAAACA+CGG | + | chr3.4:59704137-59704156 | None:intergenic | 40.0% | |
| TCACTTCCTTGTACATTGGT+TGG | - | chr3.4:59703706-59703725 | MS.gene008693:intron | 40.0% | |
| TCCAAACAGCGCCTTAATAA+AGG | - | chr3.4:59706362-59706381 | MS.gene008693:intron | 40.0% | |
| TCTACAATCATGAAGACCTC+AGG | - | chr3.4:59703412-59703431 | MS.gene008693:CDS | 40.0% | |
| TGAAGTCACAGTCTAGATTG+CGG | - | chr3.4:59705018-59705037 | MS.gene008693:CDS | 40.0% | |
| TGATGACTCACAAGCTAAGA+GGG | - | chr3.4:59702138-59702157 | MS.gene008693:CDS | 40.0% | |
| TGATTGCCGTGTTTGATTAC+AGG | - | chr3.4:59704128-59704147 | MS.gene008693:intron | 40.0% | |
| TGCAGATCAAAGCTCTTCAT+AGG | - | chr3.4:59705446-59705465 | MS.gene008693:intron | 40.0% | |
| TGGAGGTTTGGATTCTTCAT+TGG | - | chr3.4:59704200-59704219 | MS.gene008693:intron | 40.0% | |
| TTGAGTACCTTAGGAAGGTA+AGG | + | chr3.4:59705742-59705761 | None:intergenic | 40.0% | |
| TTTCATAAGCTATCCCAGAG+AGG | + | chr3.4:59706237-59706256 | None:intergenic | 40.0% | |
| ! | AAATGGGTGATTTCTGGAGA+AGG | - | chr3.4:59705241-59705260 | MS.gene008693:intron | 40.0% |
| ! | ACTTCCTTGTACATTGGTTG+GGG | - | chr3.4:59703708-59703727 | MS.gene008693:intron | 40.0% |
| ! | CACTTCCTTGTACATTGGTT+GGG | - | chr3.4:59703707-59703726 | MS.gene008693:intron | 40.0% |
| ! | CTATTTGGCTCATCAAAGGT+TGG | - | chr3.4:59703217-59703236 | MS.gene008693:CDS | 40.0% |
| ! | TCGATTTGTAGAACTCAGCA+AGG | - | chr3.4:59706405-59706424 | MS.gene008693:intron | 40.0% |
| ! | TGGTTGGATTGATGGCATTA+AGG | - | chr3.4:59705897-59705916 | MS.gene008693:intron | 40.0% |
| !! | CTTCTTTGTTTGGTGCCTTA+TGG | + | chr3.4:59705300-59705319 | None:intergenic | 40.0% |
| !! | GGATCTGATGAGATTTTTGG+AGG | - | chr3.4:59705262-59705281 | MS.gene008693:CDS | 40.0% |
| !! | TGTGGTATACTTGCTGTACT+TGG | - | chr3.4:59702109-59702128 | MS.gene008693:CDS | 40.0% |
| !! | TTGGTAAGTGGAGTGTTGAA+AGG | + | chr3.4:59706073-59706092 | None:intergenic | 40.0% |
| !! | TTTTGGCAACTGAGTTGACT+TGG | + | chr3.4:59706562-59706581 | None:intergenic | 40.0% |
| !!! | TTCGGTGTTTTACTATCTGG+AGG | - | chr3.4:59704183-59704202 | MS.gene008693:intron | 40.0% |
| ACCAGAAGCAGGATCAACAA+TGG | + | chr3.4:59703243-59703262 | None:intergenic | 45.0% | |
| ACTTGTACTCGAGCAAAGAC+CGG | - | chr3.4:59703907-59703926 | MS.gene008693:intron | 45.0% | |
| AGAGGATCATAAGGGGTTGT+TGG | + | chr3.4:59703981-59704000 | None:intergenic | 45.0% | |
| ATTGTTGCGAGGGATGCTAT+AGG | - | chr3.4:59703681-59703700 | MS.gene008693:intron | 45.0% | |
| CAGAAGGAACAGTTCAGTGA+TGG | - | chr3.4:59705865-59705884 | MS.gene008693:intron | 45.0% | |
| CTACTTCTCTTCCAGCCTTA+AGG | + | chr3.4:59704451-59704470 | None:intergenic | 45.0% | |
| CTATTGAGTGGGATGCTTCT+TGG | - | chr3.4:59706474-59706493 | MS.gene008693:intron | 45.0% | |
| CTGATGACTCACAAGCTAAG+AGG | - | chr3.4:59702137-59702156 | MS.gene008693:CDS | 45.0% | |
| CTGTGATGTTATTGCACACC+TGG | - | chr3.4:59703473-59703492 | MS.gene008693:CDS | 45.0% | |
| GCACAAAAGCTGCTAAGCAA+TGG | - | chr3.4:59704253-59704272 | MS.gene008693:CDS | 45.0% | |
| GCACAGAGAAAGCTATTGAG+TGG | - | chr3.4:59706462-59706481 | MS.gene008693:intron | 45.0% | |
| GCATTGGGGCCCAATATAAA+TGG | + | chr3.4:59702762-59702781 | None:intergenic | 45.0% | |
| GCGAAAAGATGTGGGCAAAT+AGG | - | chr3.4:59704559-59704578 | MS.gene008693:CDS | 45.0% | |
| GGAGTCAAATGGGTGATTTC+TGG | - | chr3.4:59705235-59705254 | MS.gene008693:intron | 45.0% | |
| GGATGGCATAGATGCAATTG+AGG | - | chr3.4:59705123-59705142 | MS.gene008693:CDS | 45.0% | |
| GGTTTACAAGCTTATGGGAG+TGG | - | chr3.4:59702367-59702386 | MS.gene008693:intron | 45.0% | |
| GTAGAACTCAGCAAGGCTAA+CGG | - | chr3.4:59706412-59706431 | MS.gene008693:intron | 45.0% | |
| GTATGTCGCGGTCTAGATTA+CGG | - | chr3.4:59703499-59703518 | MS.gene008693:CDS | 45.0% | |
| GTTGGCTATGGTTGGATTGA+TGG | - | chr3.4:59705889-59705908 | MS.gene008693:intron | 45.0% | |
| TAGTCCCCAACCAATGTACA+AGG | + | chr3.4:59703715-59703734 | None:intergenic | 45.0% | |
| TCAAGCAACCTTGATCCTTC+TGG | - | chr3.4:59706497-59706516 | MS.gene008693:intron | 45.0% | |
| TGTACCATCTACGAAACTCC+CGG | + | chr3.4:59703929-59703948 | None:intergenic | 45.0% | |
| TTACCTTGCGGCATGTTTCT+TGG | + | chr3.4:59705330-59705349 | None:intergenic | 45.0% | |
| TTGTTGCGAGGGATGCTATA+GGG | - | chr3.4:59703682-59703701 | MS.gene008693:intron | 45.0% | |
| ! | AAGGCGTTCCTCAAAACTAG+AGG | + | chr3.4:59703999-59704018 | None:intergenic | 45.0% |
| ! | GAACAGTTCAGTGATGGAGT+TGG | - | chr3.4:59705871-59705890 | MS.gene008693:intron | 45.0% |
| ! | TACATTGGTTGGGGACTAGA+TGG | - | chr3.4:59703717-59703736 | MS.gene008693:intron | 45.0% |
| ! | TTCAGTGATGGAGTTGGCTA+TGG | - | chr3.4:59705877-59705896 | MS.gene008693:intron | 45.0% |
| ! | TTGATGACTGATGTGCCGTT+CGG | - | chr3.4:59704165-59704184 | MS.gene008693:intron | 45.0% |
| ! | TTTGAGGAACGCCTTTGAGA+AGG | - | chr3.4:59704004-59704023 | MS.gene008693:intron | 45.0% |
| !! | CTTTGAGAGGTTTTTCCCTC+AGG | - | chr3.4:59706117-59706136 | MS.gene008693:intron | 45.0% |
| !! | GCCTTTATTAAGGCGCTGTT+TGG | + | chr3.4:59706366-59706385 | None:intergenic | 45.0% |
| !!! | CCGTTCGGTGTTTTACTATC+TGG | - | chr3.4:59704180-59704199 | MS.gene008693:intron | 45.0% |
| !!! | CTTCTCTGGCTCTACAGTTT+TGG | + | chr3.4:59706579-59706598 | None:intergenic | 45.0% |
| !!! | ATTATTATTGTTTTAAATAA+CGG | + | chr3.4:59703532-59703551 | None:intergenic | 5.0% |
| !!! | TAATTTTTTAAAATTTTACA+TGG | - | chr3.4:59702423-59702442 | MS.gene008693:intron | 5.0% |
| !!! | TTAATTTTATTTTATTTTTG+TGG | - | chr3.4:59705092-59705111 | MS.gene008693:CDS | 5.0% |
| !!! | TTTTTTATTTTTGTATTATA+AGG | - | chr3.4:59702346-59702365 | MS.gene008693:intron | 5.0% |
| AAGACCGGGAGTTTCGTAGA+TGG | - | chr3.4:59703922-59703941 | MS.gene008693:intron | 50.0% | |
| AGCAGTCACTGCTAGATACC+TGG | - | chr3.4:59704227-59704246 | MS.gene008693:intron | 50.0% | |
| ATAGCCTCATTGAACCACGG+AGG | + | chr3.4:59703954-59703973 | None:intergenic | 50.0% | |
| ATTGCCTGCGAGAAAGCTCA+AGG | + | chr3.4:59702171-59702190 | None:intergenic | 50.0% | |
| CAATCCTCCGTGGTTCAATG+AGG | - | chr3.4:59703947-59703966 | MS.gene008693:intron | 50.0% | |
| CACACCTGGTTAGTATGTCG+CGG | - | chr3.4:59703487-59703506 | MS.gene008693:CDS | 50.0% | |
| CCAAATGCTGCTCTTCCAGA+AGG | + | chr3.4:59706515-59706534 | None:intergenic | 50.0% | |
| CTGCTCTTCCAGAAGGATCA+AGG | + | chr3.4:59706508-59706527 | None:intergenic | 50.0% | |
| CTTGTACTCGAGCAAAGACC+GGG | - | chr3.4:59703908-59703927 | MS.gene008693:intron | 50.0% | |
| GCCATTGTTGATCCTGCTTC+TGG | - | chr3.4:59703239-59703258 | MS.gene008693:CDS | 50.0% | |
| GGGGTCACTTCCTTGTACAT+TGG | - | chr3.4:59703702-59703721 | MS.gene008693:intron | 50.0% | |
| GTAGATGGTACAATCCTCCG+TGG | - | chr3.4:59703937-59703956 | MS.gene008693:intron | 50.0% | |
| TAGACCGCGACATACTAACC+AGG | + | chr3.4:59703494-59703513 | None:intergenic | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr3.4:59705324-59705343 | MS.gene008693:CDS | 50.0% | |
| TCTCTTCCAGCCTTAAGGTC+AGG | + | chr3.4:59704446-59704465 | None:intergenic | 50.0% | |
| TGTTGCGAGGGATGCTATAG+GGG | - | chr3.4:59703683-59703702 | MS.gene008693:intron | 50.0% | |
| TTAGGGTGCACCTGACCTTA+AGG | - | chr3.4:59704433-59704452 | MS.gene008693:intron | 50.0% | |
| TTGCTCGAGTACAAGTGACC+AGG | + | chr3.4:59703903-59703922 | None:intergenic | 50.0% | |
| ! | AGAGGTTGATCACCAGAAGC+AGG | + | chr3.4:59703254-59703273 | None:intergenic | 50.0% |
| ! | CCTTCTGGAAGAGCAGCATT+TGG | - | chr3.4:59706512-59706531 | MS.gene008693:intron | 50.0% |
| ! | GTGATGGAGTTGGCTATGGT+TGG | - | chr3.4:59705881-59705900 | MS.gene008693:intron | 50.0% |
| !! | TGTCACAGATTGAAGCACCG+TGG | - | chr3.4:59703158-59703177 | MS.gene008693:intron | 50.0% |
| ACCGTGGTCCAGATTGGAGT+GGG | - | chr3.4:59703174-59703193 | MS.gene008693:CDS | 55.0% | |
| CATGCAACACTAGCTCCTCC+AGG | + | chr3.4:59706440-59706459 | None:intergenic | 55.0% | |
| CTCGAGTACAAGTGACCAGG+TGG | + | chr3.4:59703900-59703919 | None:intergenic | 55.0% | |
| GCATCCTTGAGCTTTCTCGC+AGG | - | chr3.4:59702164-59702183 | MS.gene008693:CDS | 55.0% | |
| GTCACTGCTAGATACCTGGC+TGG | - | chr3.4:59704231-59704250 | MS.gene008693:intron | 55.0% | |
| TCAGCAAGGCTAACGGTTCC+TGG | - | chr3.4:59706419-59706438 | MS.gene008693:intron | 55.0% | |
| ! | TAGCAGCTTTTGTGCCAGCC+AGG | + | chr3.4:59704248-59704267 | None:intergenic | 55.0% |
| !! | TGAAGCACCGTGGTCCAGAT+TGG | - | chr3.4:59703168-59703187 | MS.gene008693:intron | 55.0% |
| CACCGTGGTCCAGATTGGAG+TGG | - | chr3.4:59703173-59703192 | MS.gene008693:CDS | 60.0% | |
| CGCGGTCTAGATTACGGTCG+CGG | - | chr3.4:59703505-59703524 | MS.gene008693:CDS | 60.0% | |
| GCAAGGCTAACGGTTCCTGG+AGG | - | chr3.4:59706422-59706441 | MS.gene008693:intron | 60.0% | |
| GCCCACTCCAATCTGGACCA+CGG | + | chr3.4:59703178-59703197 | None:intergenic | 60.0% | |
| GGTGCACCTGACCTTAAGGC+TGG | - | chr3.4:59704437-59704456 | MS.gene008693:intron | 60.0% | |
| TGGTGGAGCCCACTCCAATC+TGG | + | chr3.4:59703185-59703204 | None:intergenic | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr3.4:59703188-59703207 | MS.gene008693:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 59702106 | 59706649 | 59702106 | ID=MS.gene008693 |
| chr3.4 | mRNA | 59702106 | 59706649 | 59702106 | ID=MS.gene008693.t1;Parent=MS.gene008693 |
| chr3.4 | exon | 59706596 | 59706649 | 59706596 | ID=MS.gene008693.t1.exon1;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59706596 | 59706649 | 59706596 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59705451 | 59705582 | 59705451 | ID=MS.gene008693.t1.exon2;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59705451 | 59705582 | 59705451 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59705261 | 59705356 | 59705261 | ID=MS.gene008693.t1.exon3;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59705261 | 59705356 | 59705261 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59705017 | 59705158 | 59705017 | ID=MS.gene008693.t1.exon4;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59705017 | 59705158 | 59705017 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59704730 | 59704923 | 59704730 | ID=MS.gene008693.t1.exon5;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59704730 | 59704923 | 59704730 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59704444 | 59704605 | 59704444 | ID=MS.gene008693.t1.exon6;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59704444 | 59704605 | 59704444 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59704238 | 59704318 | 59704238 | ID=MS.gene008693.t1.exon7;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59704238 | 59704318 | 59704238 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59703410 | 59703631 | 59703410 | ID=MS.gene008693.t1.exon8;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59703410 | 59703631 | 59703410 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59703170 | 59703304 | 59703170 | ID=MS.gene008693.t1.exon9;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59703170 | 59703304 | 59703170 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59703002 | 59703082 | 59703002 | ID=MS.gene008693.t1.exon10;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59703002 | 59703082 | 59703002 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59702819 | 59702905 | 59702819 | ID=MS.gene008693.t1.exon11;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59702819 | 59702905 | 59702819 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59702617 | 59702724 | 59702617 | ID=MS.gene008693.t1.exon12;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59702617 | 59702724 | 59702617 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| chr3.4 | exon | 59702106 | 59702339 | 59702106 | ID=MS.gene008693.t1.exon13;Parent=MS.gene008693.t1 |
| chr3.4 | CDS | 59702106 | 59702339 | 59702106 | ID=cds.MS.gene008693.t1;Parent=MS.gene008693.t1 |
| Gene Sequence |
| Protein sequence |
