AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75475


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75475.t1 MTR_3g087220 98.596 570 8 0 1 570 1 570 0.0 1182
MS.gene75475.t1 MTR_5g071360 77.878 556 123 0 1 556 1 556 0.0 938
MS.gene75475.t1 MTR_3g464580 74.517 569 142 2 1 566 1 569 0.0 913
MS.gene75475.t1 MTR_5g071360 77.255 510 116 0 1 510 1 510 0.0 855
MS.gene75475.t1 MTR_3g464580 75.639 509 123 1 1 508 1 509 0.0 833
MS.gene75475.t1 MTR_3g464580 76.562 448 103 2 1 447 1 447 0.0 736
MS.gene75475.t1 MTR_5g069310 69.298 114 35 0 443 556 2 115 1.67e-51 173
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75475.t1 AT5G10240 85.199 554 82 0 1 554 1 554 0.0 1021
MS.gene75475.t1 AT5G65010 85.455 550 80 0 1 550 1 550 0.0 1018
MS.gene75475.t1 AT5G65010 85.299 551 80 1 1 550 1 551 0.0 1015
MS.gene75475.t1 AT5G10240 84.657 554 84 1 1 554 1 553 0.0 1010
MS.gene75475.t1 AT3G47340 75.221 565 139 1 1 565 1 564 0.0 934
MS.gene75475.t1 AT3G47340 76.378 508 120 0 1 508 1 508 0.0 856
MS.gene75475.t1 AT3G47340 77.218 417 95 0 1 417 1 417 0.0 714
MS.gene75475.t1 AT3G47340 77.483 302 68 0 116 417 1 302 0.0 520

Find 135 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCATTACCCCTCTTTATT+TGG 0.114873 3.3:+72744074 MS.gene75475:CDS
CCAAGCCGAAGTTGATTTAT+TGG 0.156555 3.3:-72746758 None:intergenic
ATACAAACCTTTGGCAAATA+TGG 0.166150 3.3:-72747247 None:intergenic
GTTCTATGGCATTAGGTTAA+TGG 0.192017 3.3:+72743772 MS.gene75475:intron
TTCTCTATCCTTTCAATATC+AGG 0.209485 3.3:-72747187 None:intergenic
GAAGGTTCAGATGAAATATT+TGG 0.221785 3.3:+72746509 MS.gene75475:CDS
CAAATCATTGGGAGTGAAAA+TGG 0.232355 3.3:+72746475 MS.gene75475:CDS
TACCCCTCTTTATTTGGGTT+GGG 0.252968 3.3:+72744080 MS.gene75475:CDS
GGCATTACCCCTCTTTATTT+GGG 0.262355 3.3:+72744075 MS.gene75475:CDS
TTCTATGGCATTAGGTTAAT+GGG 0.266561 3.3:+72743773 MS.gene75475:intron
CTTCCTTGTTAGGCGCCTTA+TGG 0.267987 3.3:-72746547 None:intergenic
GCTATTGTGGACCCTACTTC+TGG 0.276442 3.3:+72743607 MS.gene75475:CDS
TGATGAAGCTCTTCCTTGTT+AGG 0.297491 3.3:-72746557 None:intergenic
TGCAGTGGCCAATAGATATT+TGG 0.298358 3.3:+72746001 MS.gene75475:CDS
TTCGATGATGCGAGCGCGTT+TGG 0.303802 3.3:-72743500 None:intergenic
ATTGCTGCTCGTGATGCTAT+TGG 0.320060 3.3:+72744054 MS.gene75475:CDS
TGTGATTAGTATGAAGAATA+TGG 0.322666 3.3:+72743961 MS.gene75475:intron
CAATAAATCAACTTCGGCTT+GGG 0.326748 3.3:+72746759 MS.gene75475:CDS
TATCGATCCGGAGTGGAAAA+TGG 0.332343 3.3:+72746837 MS.gene75475:CDS
CGAACTTCATTTCACAGTTC+AGG 0.340310 3.3:+72746252 MS.gene75475:CDS
TTACCCCTCTTTATTTGGGT+TGG 0.360345 3.3:+72744079 MS.gene75475:CDS
GCATATATATTCCAGCAAAC+AGG 0.371801 3.3:+72745024 MS.gene75475:CDS
AGAGGCACGTGTACCGTTCT+TGG 0.383283 3.3:+72746786 MS.gene75475:CDS
ACCCCTCTTTATTTGGGTTG+GGG 0.385041 3.3:+72744081 MS.gene75475:CDS
TGTTCTGTTGTCCGGAGGAC+TGG 0.389790 3.3:+72745962 MS.gene75475:CDS
CCCTTTGGTGTTCTGTTGTC+CGG 0.394985 3.3:+72745954 MS.gene75475:CDS
TTACATCATATGTTTCAATA+TGG 0.407697 3.3:-72746406 None:intergenic
CCTTCAGGTCGTGCCGCGCT+TGG 0.420882 3.3:+72747864 MS.gene75475:CDS
GCTGCCAGGTCAACAGTTCC+AGG 0.421132 3.3:+72747771 MS.gene75475:CDS
TACTTTCTGCATTGGTATAG+AGG 0.424643 3.3:+72746064 MS.gene75475:CDS
CAGTTGGATTGATGGTTTGA+AGG 0.424749 3.3:+72747392 MS.gene75475:CDS
GTCGGATACAGTTGGATTGA+TGG 0.430598 3.3:+72747384 MS.gene75475:CDS
GTTGGATCATAGCGTGTTGA+TGG 0.432444 3.3:-72745241 None:intergenic
AGTATCAGCCAAATATCTAT+TGG 0.434666 3.3:-72746009 None:intergenic
TCTTTAGAGGGATCCATTGT+CGG 0.443265 3.3:-72747937 None:intergenic
TATTGAAAGGATAGAGAAAT+GGG 0.451135 3.3:+72747192 MS.gene75475:CDS
CATGCCACACTAGGGCCTCC+TGG 0.457389 3.3:-72747789 None:intergenic
ATATTGAAAGGATAGAGAAA+TGG 0.459884 3.3:+72747191 MS.gene75475:CDS
TATTTGGGTTGGGGCCATGA+TGG 0.462409 3.3:+72744090 MS.gene75475:CDS
TACTGCAAAAGCTGTGGAAT+GGG 0.464980 3.3:+72747815 MS.gene75475:CDS
AGGTTACCTGTATTTCCATA+AGG 0.465018 3.3:+72746532 MS.gene75475:CDS
AAATCTCATCAATTTCGAAC+TGG 0.470336 3.3:+72743832 MS.gene75475:CDS
GCAGTACTGCATGCCACACT+AGG 0.471392 3.3:-72747798 None:intergenic
TAGGCGCCTTATGGAAATAC+AGG 0.475864 3.3:-72746538 None:intergenic
AGAAGAGTTTGTTGATATGC+TGG 0.476984 3.3:+72743984 MS.gene75475:CDS
AAAGAGGTAGCAAATTATCT+TGG 0.479356 3.3:+72746217 MS.gene75475:CDS
AAGTTGATTTATTGGCTCTC+AGG 0.481018 3.3:-72746750 None:intergenic
CTCGTCACTTGTTGCTGCAG+TGG 0.482865 3.3:+72745986 MS.gene75475:CDS
CAATGCAAACCACTCCAATC+AGG 0.489191 3.3:-72743550 None:intergenic
TACTGACACTGCCCGTCAGT+GGG 0.497561 3.3:+72746028 MS.gene75475:CDS
CTTTAGAGGGATCCATTGTC+GGG 0.500502 3.3:-72747936 None:intergenic
AGAGGTTGATCTCCAGAAGT+AGG 0.500746 3.3:-72743619 None:intergenic
GATACGTACGGTGACAATAA+CGG 0.505224 3.3:-72743659 None:intergenic
CATTTCAACAGGGTGCTGCC+AGG 0.506834 3.3:+72747757 MS.gene75475:intron
CCAATAAATCAACTTCGGCT+TGG 0.506921 3.3:+72746758 MS.gene75475:CDS
GTGCGGAATCTTAGCAGTGT+TGG 0.507911 3.3:+72743456 MS.gene75475:CDS
TGCGGAATCTTAGCAGTGTT+GGG 0.508911 3.3:+72743457 MS.gene75475:CDS
CAGTTACATACTTTCTGCAT+TGG 0.510357 3.3:+72746056 MS.gene75475:CDS
AACTTCGGCTTGGGGTATAG+AGG 0.510802 3.3:+72746768 MS.gene75475:CDS
TCATCAACGTCTTGCTATTG+TGG 0.511777 3.3:+72743594 MS.gene75475:CDS
CACTGCCATGGATATCGATC+CGG 0.514410 3.3:+72746825 MS.gene75475:CDS
TGCGACATAGAGGACCTGAT+TGG 0.528704 3.3:+72743536 MS.gene75475:CDS
GTCTTGTCATAGTTGTAAAG+AGG 0.529718 3.3:-72743637 None:intergenic
GGAGTGAAAATGGTTCTGTC+TGG 0.532933 3.3:+72746485 MS.gene75475:CDS
TTTCTGGACATAAGAAACAT+TGG 0.539930 3.3:-72746449 None:intergenic
GCCTCCTGGAACTGTTGACC+TGG 0.540604 3.3:-72747775 None:intergenic
GGTTCAGATGAAATATTTGG+AGG 0.542536 3.3:+72746512 MS.gene75475:CDS
AGCTGCATGAACACCAAGCG+CGG 0.545486 3.3:-72747877 None:intergenic
ATAAATTCTTTATCCAAGAA+CGG 0.547808 3.3:-72746799 None:intergenic
TGGCCCCAACCCAAATAAAG+AGG 0.550694 3.3:-72744084 None:intergenic
AAGTGACGAGTCCAGTCCTC+CGG 0.552950 3.3:-72745973 None:intergenic
AAACACTCCTACCACAAAAG+AGG 0.557038 3.3:+72747558 MS.gene75475:CDS
AAAATAAAAGAGCCCGACAA+TGG 0.557915 3.3:+72747924 MS.gene75475:CDS
GAGGTTGATCTCCAGAAGTA+GGG 0.558161 3.3:-72743618 None:intergenic
TGTTCATGCAGCTGCATACA+AGG 0.562587 3.3:+72747887 MS.gene75475:CDS
AACACTCCTACCACAAAAGA+GGG 0.564176 3.3:+72747559 MS.gene75475:CDS
CCAAGCGCGGCACGACCTGA+AGG 0.564595 3.3:-72747864 None:intergenic
TTTGCGTGAGGCCTTTGAGA+GGG 0.566242 3.3:+72745267 MS.gene75475:CDS
ATGATGACTGATGTACCCTT+TGG 0.566933 3.3:+72745939 MS.gene75475:CDS
GGCCCCAACCCAAATAAAGA+GGG 0.568153 3.3:-72744083 None:intergenic
AGTTTGTTGATATGCTGGAT+GGG 0.570850 3.3:+72743989 MS.gene75475:CDS
AATCTTAGCAGTGTTGGGTG+TGG 0.573813 3.3:+72743462 MS.gene75475:CDS
AGAATTTATCAACACTGCCA+TGG 0.574909 3.3:+72746813 MS.gene75475:CDS
TTGCTGGAATATATATGCCC+TGG 0.575185 3.3:-72745019 None:intergenic
AAGGCCTCACGCAAAACCGT+TGG 0.575646 3.3:-72745259 None:intergenic
TAACTGTGATCCCCACTGAC+GGG 0.578963 3.3:-72746039 None:intergenic
GCGGCAGCCACATACCATCA+TGG 0.580966 3.3:-72744104 None:intergenic
CCGGACAACAGAACACCAAA+GGG 0.583577 3.3:-72745954 None:intergenic
AGATAAAGCCTGATATTGAA+AGG 0.584487 3.3:+72747179 MS.gene75475:intron
CATATATATTCCAGCAAACA+GGG 0.584924 3.3:+72745025 MS.gene75475:CDS
GGATTTGAGAGCCGCAAAAG+AGG 0.588975 3.3:+72746201 MS.gene75475:CDS
ATACTGACACTGCCCGTCAG+TGG 0.589598 3.3:+72746027 MS.gene75475:CDS
GCGATGGTGTCGGATACAGT+TGG 0.589745 3.3:+72747376 MS.gene75475:CDS
TTTCCATAAGGCGCCTAACA+AGG 0.590033 3.3:+72746544 MS.gene75475:CDS
CAAAAGAGGGATACCACTAC+AGG 0.590975 3.3:+72747572 MS.gene75475:CDS
GAGAGCCAATAAATCAACTT+CGG 0.592271 3.3:+72746753 MS.gene75475:CDS
AATAAATCAACTTCGGCTTG+GGG 0.592392 3.3:+72746760 MS.gene75475:CDS
GAGTTTGTTGATATGCTGGA+TGG 0.592504 3.3:+72743988 MS.gene75475:CDS
GTAACTGTGATCCCCACTGA+CGG 0.594247 3.3:-72746040 None:intergenic
TTGCAGGAGGATTAAGAAGG+TGG 0.595137 3.3:+72745188 MS.gene75475:intron
GGAAGGTATAGATGCACTTG+AGG 0.595941 3.3:+72746373 MS.gene75475:intron
ATCAACACGCTATGATCCAA+CGG 0.596803 3.3:+72745243 MS.gene75475:CDS
GCATCATCGAATTGTCTCGC+AGG 0.596887 3.3:+72743512 MS.gene75475:CDS
TCTCGCAGGTTGCGACATAG+AGG 0.597101 3.3:+72743526 MS.gene75475:CDS
CCACTCCGGATCGATATCCA+TGG 0.600070 3.3:-72746830 None:intergenic
TGAGAATCCATATTTGCCAA+AGG 0.602556 3.3:+72747240 MS.gene75475:CDS
AATCCAGCATGGTCTTTAGA+GGG 0.604010 3.3:-72747949 None:intergenic
AAAATGGTTCTGTCTGGAGA+AGG 0.606208 3.3:+72746491 MS.gene75475:CDS
GGAATAGCTAACCCTCTCAA+AGG 0.609261 3.3:-72745278 None:intergenic
TCCGGACAACAGAACACCAA+AGG 0.611807 3.3:-72745955 None:intergenic
GTACTGCAAAAGCTGTGGAA+TGG 0.613846 3.3:+72747814 MS.gene75475:CDS
GAACAGTTCAGCGATGGTGT+CGG 0.616755 3.3:+72747366 MS.gene75475:CDS
GCACATATTGTACAGGCAGA+AGG 0.619788 3.3:+72747344 MS.gene75475:intron
TCTTTGCAGGAGGATTAAGA+AGG 0.620740 3.3:+72745185 MS.gene75475:intron
CAGTACTGCATGCCACACTA+GGG 0.621411 3.3:-72747797 None:intergenic
CAGAAGGAACAGTTCAGCGA+TGG 0.621633 3.3:+72747360 MS.gene75475:CDS
CAAGCGCGGCACGACCTGAA+GGG 0.622971 3.3:-72747863 None:intergenic
TTTGGTGTTCTGTTGTCCGG+AGG 0.633191 3.3:+72745957 MS.gene75475:CDS
TCTATGGCATTAGGTTAATG+GGG 0.644846 3.3:+72743774 MS.gene75475:intron
TTGTTGGCAGCCGTCATGTG+CGG 0.647753 3.3:+72743439 None:intergenic
CATAGAGGACCTGATTGGAG+TGG 0.648591 3.3:+72743541 MS.gene75475:CDS
AGTTCCAGGAGGCCCTAGTG+TGG 0.651099 3.3:+72747785 MS.gene75475:CDS
CTGGAATATATATGCCCTGG+AGG 0.658198 3.3:-72745016 None:intergenic
CTGTGGAATGGGATGCAGCA+TGG 0.665004 3.3:+72747826 MS.gene75475:CDS
TAGCAAGACGTTGATGAGCG+AGG 0.666348 3.3:-72743588 None:intergenic
CCATGGATATCGATCCGGAG+TGG 0.674824 3.3:+72746830 MS.gene75475:CDS
GCCCCAACCCAAATAAAGAG+GGG 0.687236 3.3:-72744082 None:intergenic
GAACTGTGAAATGAAGTTCG+TGG 0.696854 3.3:-72746249 None:intergenic
GCCAGGTCAACAGTTCCAGG+AGG 0.705953 3.3:+72747774 MS.gene75475:CDS
ATGCAGTACTGCAAAAGCTG+TGG 0.707096 3.3:+72747809 MS.gene75475:CDS
ATTTGCTCTGAGAACCATGG+TGG 0.708717 3.3:-72745217 None:intergenic
GGAATTTGCTCTGAGAACCA+TGG 0.723639 3.3:-72745220 None:intergenic
ACTGACACTGCCCGTCAGTG+GGG 0.727167 3.3:+72746029 MS.gene75475:CDS
GAAGGTGGTACAATCCACCA+TGG 0.728627 3.3:+72745203 MS.gene75475:CDS
CTGTGAAATGAAGTTCGTGG+TGG 0.746248 3.3:-72746246 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTACATAAAAATATG+GGG - chr3.3:72746626-72746645 None:intergenic 10.0%
!! CAATTTATTCAAAAAAAAAA+GGG - chr3.3:72744543-72744562 None:intergenic 10.0%
!! TCAATTTATTCAAAAAAAAA+AGG - chr3.3:72744544-72744563 None:intergenic 10.0%
!! TGAATTAGATATATCATTTA+TGG + chr3.3:72744908-72744927 MS.gene75475:intron 15.0%
!!! AATTATGGTATATTACTTTT+CGG - chr3.3:72746592-72746611 None:intergenic 15.0%
!!! AATTTATTTTACAAGAAAAC+TGG - chr3.3:72747038-72747057 None:intergenic 15.0%
!!! TTCATGTTCAAATTTAAAAT+TGG - chr3.3:72747684-72747703 None:intergenic 15.0%
!! AAAAATGTTACAATAAGAAG+CGG - chr3.3:72744126-72744145 None:intergenic 20.0%
!! ACAGTTTAAAAAAATTACAC+AGG - chr3.3:72744293-72744312 None:intergenic 20.0%
!! ACATATCTGTATAAACATTA+AGG + chr3.3:72744675-72744694 MS.gene75475:intron 20.0%
!! ATAAATTCTTTATCCAAGAA+CGG - chr3.3:72746802-72746821 None:intergenic 20.0%
!! CATATAACTACTATTACTTA+TGG - chr3.3:72746140-72746159 None:intergenic 20.0%
!! GACATTATATACTTGATAAA+TGG + chr3.3:72747487-72747506 MS.gene75475:intron 20.0%
!! TAACCAAGAAAAAGTTAAAA+AGG - chr3.3:72745886-72745905 None:intergenic 20.0%
!! TAGATATATCATTTATGGAA+GGG + chr3.3:72744913-72744932 MS.gene75475:intron 20.0%
!! TATCAAGTATATAATGTCAA+TGG - chr3.3:72747485-72747504 None:intergenic 20.0%
!! TTACATCATATGTTTCAATA+TGG - chr3.3:72746409-72746428 None:intergenic 20.0%
!! TTAGATATATCATTTATGGA+AGG + chr3.3:72744912-72744931 MS.gene75475:intron 20.0%
!! TTATAGACAAAATAAAAGTG+AGG - chr3.3:72745618-72745637 None:intergenic 20.0%
!! TTCAAAGTCATACATTTAAT+TGG + chr3.3:72744365-72744384 MS.gene75475:intron 20.0%
!! TTGTAAAATAAATTTGTCTG+TGG + chr3.3:72747044-72747063 MS.gene75475:intron 20.0%
!! TTTACGTATAATTTCTCAAA+AGG - chr3.3:72745723-72745742 None:intergenic 20.0%
!!! TGAAGCTACAAATTTTATAT+AGG - chr3.3:72744457-72744476 None:intergenic 20.0%
!!! TTCAAATTTAAAATTGGTCA+AGG - chr3.3:72747678-72747697 None:intergenic 20.0%
! AAGGTAAAATGGTAGATAAA+GGG - chr3.3:72746289-72746308 None:intergenic 25.0%
! AATTTGTCGTTAATTTCATG+AGG - chr3.3:72747155-72747174 None:intergenic 25.0%
! ACACCAAAAACTTGAATAAA+CGG - chr3.3:72746687-72746706 None:intergenic 25.0%
! AGTAAAATTTAGACAGTAGA+AGG - chr3.3:72745122-72745141 None:intergenic 25.0%
! ATATCATTTGCAACAAACTT+AGG + chr3.3:72745637-72745656 MS.gene75475:intron 25.0%
! ATATTGAAAGGATAGAGAAA+TGG + chr3.3:72747191-72747210 MS.gene75475:CDS 25.0%
! CAAACGATGAAATAATTCAA+TGG - chr3.3:72745312-72745331 None:intergenic 25.0%
! TAAAGAGTTGTCTATACATT+TGG + chr3.3:72744856-72744875 MS.gene75475:intron 25.0%
! TACATTTCCTTGAAAAAACT+AGG - chr3.3:72744747-72744766 None:intergenic 25.0%
! TACATTTGGTTATGTATTCA+TGG + chr3.3:72744870-72744889 MS.gene75475:intron 25.0%
! TATTGAAAGGATAGAGAAAT+GGG + chr3.3:72747192-72747211 MS.gene75475:CDS 25.0%
! TCCAGAAAAATCAAATCATT+GGG + chr3.3:72746464-72746483 MS.gene75475:CDS 25.0%
! TGTGATTAGTATGAAGAATA+TGG + chr3.3:72743961-72743980 MS.gene75475:intron 25.0%
! TTGTAACTTTACTTCTTTCT+TGG + chr3.3:72746862-72746881 MS.gene75475:intron 25.0%
! TTTACAAGAGTAACCATAAT+CGG - chr3.3:72745078-72745097 None:intergenic 25.0%
!! AATTTATATCTTTTCCTCCA+GGG + chr3.3:72745002-72745021 MS.gene75475:CDS 25.0%
!! AGGCATTAATCTTTTACATT+CGG + chr3.3:72744807-72744826 MS.gene75475:intron 25.0%
!! GCTTTAAATTGCACAATAAA+TGG - chr3.3:72744195-72744214 None:intergenic 25.0%
!! TTCTATTTTCGCTATATATC+AGG + chr3.3:72746352-72746371 MS.gene75475:intron 25.0%
!!! ATTATTTTGCAGGATCAATA+TGG + chr3.3:72744939-72744958 MS.gene75475:intron 25.0%
!!! CATCCTTTTTAACTTTTTCT+TGG + chr3.3:72745880-72745899 MS.gene75475:intron 25.0%
!!! TTTTGAGAAGTTATTTCCAA+AGG + chr3.3:72747600-72747619 MS.gene75475:CDS 25.0%
AAAGAGGTAGCAAATTATCT+TGG + chr3.3:72746217-72746236 MS.gene75475:CDS 30.0%
AAATCTCATCAATTTCGAAC+TGG + chr3.3:72743832-72743851 MS.gene75475:CDS 30.0%
AAATTCCAATCATGAGCTTA+TGG - chr3.3:72745749-72745768 None:intergenic 30.0%
AAGACTATACAATTCACCTT+TGG - chr3.3:72747619-72747638 None:intergenic 30.0%
AATAAATGGTTCAATTCGAG+CGG - chr3.3:72744181-72744200 None:intergenic 30.0%
AATAATTCAATGGATGAGAC+AGG - chr3.3:72745302-72745321 None:intergenic 30.0%
AATCATCTGACAATCACAAT+TGG - chr3.3:72744319-72744338 None:intergenic 30.0%
AATTCCAATCATGAGCTTAT+GGG - chr3.3:72745748-72745767 None:intergenic 30.0%
AGATAAAGCCTGATATTGAA+AGG + chr3.3:72747179-72747198 MS.gene75475:intron 30.0%
AGTAGAAGGAGAAAAACAAA+TGG - chr3.3:72745108-72745127 None:intergenic 30.0%
AGTATCAGCCAAATATCTAT+TGG - chr3.3:72746012-72746031 None:intergenic 30.0%
AGTTGATTGATACAAACCTT+TGG - chr3.3:72747259-72747278 None:intergenic 30.0%
ATAAGCTCATGATTGGAATT+TGG + chr3.3:72745748-72745767 MS.gene75475:intron 30.0%
ATACAAACCTTTGGCAAATA+TGG - chr3.3:72747250-72747269 None:intergenic 30.0%
ATGAACCATTTCATTTCAAC+AGG + chr3.3:72747746-72747765 MS.gene75475:intron 30.0%
CAAGGTAAAATGGTAGATAA+AGG - chr3.3:72746290-72746309 None:intergenic 30.0%
CACAAAATGTTGTCAAATAG+CGG + chr3.3:72745446-72745465 MS.gene75475:intron 30.0%
CACCAAAAACTTGAATAAAC+GGG - chr3.3:72746686-72746705 None:intergenic 30.0%
CATATATATTCCAGCAAACA+GGG + chr3.3:72745025-72745044 MS.gene75475:CDS 30.0%
CTTAGTATCAACTACATCAA+AGG - chr3.3:72745845-72745864 None:intergenic 30.0%
GAAGGTTCAGATGAAATATT+TGG + chr3.3:72746509-72746528 MS.gene75475:CDS 30.0%
GATAGAAGATAAGATACGTA+CGG - chr3.3:72743674-72743693 None:intergenic 30.0%
GTCCAGAAAAATCAAATCAT+TGG + chr3.3:72746463-72746482 MS.gene75475:CDS 30.0%
TATATACTTGATAAATGGCC+AGG + chr3.3:72747492-72747511 MS.gene75475:intron 30.0%
TGAACCATTTCATTTCAACA+GGG + chr3.3:72747747-72747766 MS.gene75475:intron 30.0%
TGTAAGTGTGTATCTTATCT+TGG - chr3.3:72745145-72745164 None:intergenic 30.0%
TGTTTATACAGATATGTAGC+AGG - chr3.3:72744672-72744691 None:intergenic 30.0%
TTCTATGGCATTAGGTTAAT+GGG + chr3.3:72743773-72743792 MS.gene75475:intron 30.0%
TTCTCTATCCTTTCAATATC+AGG - chr3.3:72747190-72747209 None:intergenic 30.0%
TTTCTGGACATAAGAAACAT+TGG - chr3.3:72746452-72746471 None:intergenic 30.0%
! ATTTTCGCTATATATCAGGA+AGG + chr3.3:72746356-72746375 MS.gene75475:intron 30.0%
! ATTTTCTGTTCTATGGCATT+AGG + chr3.3:72743765-72743784 MS.gene75475:intron 30.0%
! CAATTTATATCTTTTCCTCC+AGG + chr3.3:72745001-72745020 MS.gene75475:CDS 30.0%
! TCTTGTAAGTGTTTTCTAGA+AGG + chr3.3:72743879-72743898 MS.gene75475:intron 30.0%
! TTGTCACATTTTCTGTTCTA+TGG + chr3.3:72743758-72743777 MS.gene75475:intron 30.0%
!! TACCCGTTTATTCAAGTTTT+TGG + chr3.3:72746681-72746700 MS.gene75475:intron 30.0%
!! TCCCAATGATTTGATTTTTC+TGG - chr3.3:72746468-72746487 None:intergenic 30.0%
!! TTTTTCAGCACATATTGTAC+AGG + chr3.3:72747337-72747356 MS.gene75475:intron 30.0%
!!! AACATGTCCTAGTTTTTTCA+AGG + chr3.3:72744737-72744756 MS.gene75475:intron 30.0%
!!! ATAATTTGCTACCTCTTTTG+CGG - chr3.3:72746215-72746234 None:intergenic 30.0%
!!! ATTATTTTTACCCTGTTTGC+TGG - chr3.3:72745038-72745057 None:intergenic 30.0%
!!! CTCGTTATTTTTTCCGATTA+TGG + chr3.3:72745062-72745081 MS.gene75475:intron 30.0%
!!! GTTTCTGTCTCAATTTTTTG+TGG - chr3.3:72743810-72743829 None:intergenic 30.0%
AAAATAAAAGAGCCCGACAA+TGG + chr3.3:72747924-72747943 MS.gene75475:CDS 35.0%
AATTCCCATAAGCTCATGAT+TGG + chr3.3:72745741-72745760 MS.gene75475:intron 35.0%
AGAATTTATCAACACTGCCA+TGG + chr3.3:72746813-72746832 MS.gene75475:CDS 35.0%
AGGTTACCTGTATTTCCATA+AGG + chr3.3:72746532-72746551 MS.gene75475:CDS 35.0%
ATAAAAATCTCGTCTGCTCA+AGG - chr3.3:72746308-72746327 None:intergenic 35.0%
ATCCATGTGCTATGCAATTA+AGG - chr3.3:72744577-72744596 None:intergenic 35.0%
CAAAGACAGCAAAGTTTAAC+AGG - chr3.3:72745171-72745190 None:intergenic 35.0%
CAAATCATTGGGAGTGAAAA+TGG + chr3.3:72746475-72746494 MS.gene75475:CDS 35.0%
CAATAAATCAACTTCGGCTT+GGG + chr3.3:72746759-72746778 MS.gene75475:CDS 35.0%
CAATGTTCAATCAACAATGC+AGG - chr3.3:72746947-72746966 None:intergenic 35.0%
CAGTTACATACTTTCTGCAT+TGG + chr3.3:72746056-72746075 MS.gene75475:CDS 35.0%
CTATAGGCTGTCTTATGATT+GGG + chr3.3:72746918-72746937 MS.gene75475:intron 35.0%
GAGAGCCAATAAATCAACTT+CGG + chr3.3:72746753-72746772 MS.gene75475:CDS 35.0%
GAGTGTTATGTCATAACTAG+AGG + chr3.3:72745659-72745678 MS.gene75475:intron 35.0%
GCATATATATTCCAGCAAAC+AGG + chr3.3:72745024-72745043 MS.gene75475:CDS 35.0%
GCTGATTACTATGTTCTAGT+TGG + chr3.3:72745772-72745791 MS.gene75475:intron 35.0%
GGTTCAGATGAAATATTTGG+AGG + chr3.3:72746512-72746531 MS.gene75475:CDS 35.0%
GTCTTGTCATAGTTGTAAAG+AGG - chr3.3:72743640-72743659 None:intergenic 35.0%
GTTATACTGTGATATCATGC+AGG + chr3.3:72745902-72745921 MS.gene75475:intron 35.0%
GTTCTATGGCATTAGGTTAA+TGG + chr3.3:72743772-72743791 MS.gene75475:intron 35.0%
TCCATGTGCTATGCAATTAA+GGG - chr3.3:72744576-72744595 None:intergenic 35.0%
TCTATGGCATTAGGTTAATG+GGG + chr3.3:72743774-72743793 MS.gene75475:intron 35.0%
TCTCAAAAATTGTCCTGTAG+TGG - chr3.3:72747588-72747607 None:intergenic 35.0%
TGAGAATCCATATTTGCCAA+AGG + chr3.3:72747240-72747259 MS.gene75475:CDS 35.0%
TGGTCAAGGTTATGATGAAA+AGG - chr3.3:72747664-72747683 None:intergenic 35.0%
! AATAAATCAACTTCGGCTTG+GGG + chr3.3:72746760-72746779 MS.gene75475:CDS 35.0%
! ACTTAATTTTCCCCCATTCA+GGG + chr3.3:72746172-72746191 MS.gene75475:intron 35.0%
! AGGCATTAAGTTGCATTTCA+TGG - chr3.3:72745703-72745722 None:intergenic 35.0%
! ATAAACGGGTAAAAGTACAC+AGG - chr3.3:72746672-72746691 None:intergenic 35.0%
! GATTTTTATTGCTAGCTCGA+AGG + chr3.3:72746319-72746338 MS.gene75475:intron 35.0%
! TACAATACCATTTTCCACTC+CGG - chr3.3:72746847-72746866 None:intergenic 35.0%
! TACTTTCTGCATTGGTATAG+AGG + chr3.3:72746064-72746083 MS.gene75475:CDS 35.0%
! TTAAACTTTGCTGTCTTTGC+AGG + chr3.3:72745172-72745191 MS.gene75475:intron 35.0%
! TTCCTCTACATTAGAAGCAT+CGG - chr3.3:72744719-72744738 None:intergenic 35.0%
!! AAGTTGATTTATTGGCTCTC+AGG - chr3.3:72746753-72746772 None:intergenic 35.0%
!! ACAGCTCATTTTAACCATGA+GGG - chr3.3:72746101-72746120 None:intergenic 35.0%
!! AGAAGAGTTTGTTGATATGC+TGG + chr3.3:72743984-72744003 MS.gene75475:CDS 35.0%
!! AGTTTGTTGATATGCTGGAT+GGG + chr3.3:72743989-72744008 MS.gene75475:CDS 35.0%
!! GAGGATGCTTTAAAATTCCA+GGG - chr3.3:72745599-72745618 None:intergenic 35.0%
!! GTTTTCAGGGTAAACAAAGT+TGG - chr3.3:72747542-72747561 None:intergenic 35.0%
!! TACAGCTCATTTTAACCATG+AGG - chr3.3:72746102-72746121 None:intergenic 35.0%
!! TGAGGATGCTTTAAAATTCC+AGG - chr3.3:72745600-72745619 None:intergenic 35.0%
AAACACTCCTACCACAAAAG+AGG + chr3.3:72747558-72747577 MS.gene75475:CDS 40.0%
AACACTCCTACCACAAAAGA+GGG + chr3.3:72747559-72747578 MS.gene75475:CDS 40.0%
ACATGTCCAAAATGCATCTC+TGG - chr3.3:72744223-72744242 None:intergenic 40.0%
ACCCTTAATTGCATAGCACA+TGG + chr3.3:72744572-72744591 MS.gene75475:intron 40.0%
AGAACCAGTGCTGTCAATTA+TGG - chr3.3:72745533-72745552 None:intergenic 40.0%
AGCACCCTGTTGAAATGAAA+TGG - chr3.3:72747754-72747773 None:intergenic 40.0%
ATAACAACACCAAGCAGAAC+TGG - chr3.3:72745348-72745367 None:intergenic 40.0%
ATCAACACGCTATGATCCAA+CGG + chr3.3:72745243-72745262 MS.gene75475:CDS 40.0%
ATGATGACTGATGTACCCTT+TGG + chr3.3:72745939-72745958 MS.gene75475:CDS 40.0%
ATGGTTCATGCATAGTCAAG+TGG - chr3.3:72747735-72747754 None:intergenic 40.0%
CATTCCATAATTGACAGCAC+TGG + chr3.3:72745526-72745545 MS.gene75475:intron 40.0%
CCAATAAATCAACTTCGGCT+TGG + chr3.3:72746758-72746777 MS.gene75475:CDS 40.0%
CGAACTTCATTTCACAGTTC+AGG + chr3.3:72746252-72746271 MS.gene75475:CDS 40.0%
GAACTGTGAAATGAAGTTCG+TGG - chr3.3:72746252-72746271 None:intergenic 40.0%
GATACGTACGGTGACAATAA+CGG - chr3.3:72743662-72743681 None:intergenic 40.0%
GATCATGCTAACGAACAAGT+AGG + chr3.3:72747414-72747433 MS.gene75475:intron 40.0%
GCTATAGGCTGTCTTATGAT+TGG + chr3.3:72746917-72746936 MS.gene75475:intron 40.0%
GGGGATAAGCACAAGAATTA+TGG - chr3.3:72746607-72746626 None:intergenic 40.0%
GTGCTGTCAATTATGGAATG+CGG - chr3.3:72745526-72745545 None:intergenic 40.0%
TAATGCCTGTGTATGCTAGA+GGG - chr3.3:72744795-72744814 None:intergenic 40.0%
TACTGCAAAAGCTGTGGAAT+GGG + chr3.3:72747815-72747834 MS.gene75475:CDS 40.0%
TCATGCATAGTCAAGTGGTT+TGG - chr3.3:72747730-72747749 None:intergenic 40.0%
TCTTTGCAGGAGGATTAAGA+AGG + chr3.3:72745185-72745204 MS.gene75475:intron 40.0%
TGATGAAGCTCTTCCTTGTT+AGG - chr3.3:72746560-72746579 None:intergenic 40.0%
TGCAGTGGCCAATAGATATT+TGG + chr3.3:72746001-72746020 MS.gene75475:CDS 40.0%
TGCTTGTTCGTATGTCTTGA+AGG + chr3.3:72747288-72747307 MS.gene75475:intron 40.0%
TGGCATTACCCCTCTTTATT+TGG + chr3.3:72744074-72744093 MS.gene75475:CDS 40.0%
TTAATGCCTGTGTATGCTAG+AGG - chr3.3:72744796-72744815 None:intergenic 40.0%
TTAGAATGTCCAGTTCTGCT+TGG + chr3.3:72745336-72745355 MS.gene75475:intron 40.0%
TTGCTGGAATATATATGCCC+TGG - chr3.3:72745022-72745041 None:intergenic 40.0%
! AAAATGGTTCTGTCTGGAGA+AGG + chr3.3:72746491-72746510 MS.gene75475:CDS 40.0%
! AGACTATTTTCAACTCTCCC+TGG + chr3.3:72745579-72745598 MS.gene75475:intron 40.0%
! CAGTTGGATTGATGGTTTGA+AGG + chr3.3:72747392-72747411 MS.gene75475:CDS 40.0%
! CCAAGCCGAAGTTGATTTAT+TGG - chr3.3:72746761-72746780 None:intergenic 40.0%
! CCAATTCCAGAGATGCATTT+TGG + chr3.3:72744214-72744233 MS.gene75475:intron 40.0%
! GACTTAATTTTCCCCCATTC+AGG + chr3.3:72746171-72746190 MS.gene75475:intron 40.0%
! GGCATTACCCCTCTTTATTT+GGG + chr3.3:72744075-72744094 MS.gene75475:CDS 40.0%
! TACCCCTCTTTATTTGGGTT+GGG + chr3.3:72744080-72744099 MS.gene75475:CDS 40.0%
! TTACCCCTCTTTATTTGGGT+TGG + chr3.3:72744079-72744098 MS.gene75475:CDS 40.0%
! TTCGGCAGTTGCATGATTTT+AGG + chr3.3:72744825-72744844 MS.gene75475:intron 40.0%
!! CCAAAATGCATCTCTGGAAT+TGG - chr3.3:72744217-72744236 None:intergenic 40.0%
!! GAGTTTGTTGATATGCTGGA+TGG + chr3.3:72743988-72744007 MS.gene75475:CDS 40.0%
!! TCATCAACGTCTTGCTATTG+TGG + chr3.3:72743594-72743613 MS.gene75475:CDS 40.0%
!! TGCTTGGTGTTGTTATGTAG+TGG + chr3.3:72745352-72745371 MS.gene75475:intron 40.0%
!!! TTGTGGTAGGAGTGTTTTCA+GGG - chr3.3:72747555-72747574 None:intergenic 40.0%
!!! TTTGTGGTAGGAGTGTTTTC+AGG - chr3.3:72747556-72747575 None:intergenic 40.0%
AATGCCTGTGTATGCTAGAG+GGG - chr3.3:72744794-72744813 None:intergenic 45.0%
AGCATAAGAGGCTGAGCTAT+AGG + chr3.3:72746902-72746921 MS.gene75475:intron 45.0%
ATCTCGTCATGCAGCATAAG+AGG + chr3.3:72746890-72746909 MS.gene75475:intron 45.0%
ATGCAGTACTGCAAAAGCTG+TGG + chr3.3:72747809-72747828 MS.gene75475:CDS 45.0%
ATTGCTGCTCGTGATGCTAT+TGG + chr3.3:72744054-72744073 MS.gene75475:CDS 45.0%
CAAAAGAGGGATACCACTAC+AGG + chr3.3:72747572-72747591 MS.gene75475:CDS 45.0%
CAATGCAAACCACTCCAATC+AGG - chr3.3:72743553-72743572 None:intergenic 45.0%
CGAATTCCGCTACAAAACAG+TGG - chr3.3:72745487-72745506 None:intergenic 45.0%
CTCGTCTGCTCAAGGTAAAA+TGG - chr3.3:72746300-72746319 None:intergenic 45.0%
CTGGAATATATATGCCCTGG+AGG - chr3.3:72745019-72745038 None:intergenic 45.0%
CTGTGAAATGAAGTTCGTGG+TGG - chr3.3:72746249-72746268 None:intergenic 45.0%
GCACATATTGTACAGGCAGA+AGG + chr3.3:72747344-72747363 MS.gene75475:intron 45.0%
GGAATAGCTAACCCTCTCAA+AGG - chr3.3:72745281-72745300 None:intergenic 45.0%
GTACTGCAAAAGCTGTGGAA+TGG + chr3.3:72747814-72747833 MS.gene75475:CDS 45.0%
GTCGGATACAGTTGGATTGA+TGG + chr3.3:72747384-72747403 MS.gene75475:CDS 45.0%
GTTGGATCATAGCGTGTTGA+TGG - chr3.3:72745244-72745263 None:intergenic 45.0%
TAGGCGCCTTATGGAAATAC+AGG - chr3.3:72746541-72746560 None:intergenic 45.0%
TATCGATCCGGAGTGGAAAA+TGG + chr3.3:72746837-72746856 MS.gene75475:CDS 45.0%
TCCAAAAATCTGGACCCTTC+AGG + chr3.3:72747849-72747868 MS.gene75475:CDS 45.0%
TGCAGCATGGTCCAAAAATC+TGG + chr3.3:72747839-72747858 MS.gene75475:CDS 45.0%
TGCCGATGCTTCTAATGTAG+AGG + chr3.3:72744714-72744733 MS.gene75475:intron 45.0%
TGCGGAATCTTAGCAGTGTT+GGG + chr3.3:72743457-72743476 MS.gene75475:CDS 45.0%
TGTTCATGCAGCTGCATACA+AGG + chr3.3:72747887-72747906 MS.gene75475:CDS 45.0%
TTGCAGGAGGATTAAGAAGG+TGG + chr3.3:72745188-72745207 MS.gene75475:intron 45.0%
! AACTTTGCTGTCTTTGCAGG+AGG + chr3.3:72745175-72745194 MS.gene75475:intron 45.0%
! AATCTTAGCAGTGTTGGGTG+TGG + chr3.3:72743462-72743481 MS.gene75475:CDS 45.0%
! ACCTGAAGGGTCCAGATTTT+TGG - chr3.3:72747853-72747872 None:intergenic 45.0%
! AGAGGTTGATCTCCAGAAGT+AGG - chr3.3:72743622-72743641 None:intergenic 45.0%
! GAGGTTGATCTCCAGAAGTA+GGG - chr3.3:72743621-72743640 None:intergenic 45.0%
! GCTATGCCACTGTTTTGTAG+CGG + chr3.3:72745478-72745497 MS.gene75475:intron 45.0%
! GGAAGGTATAGATGCACTTG+AGG + chr3.3:72746373-72746392 MS.gene75475:intron 45.0%
! GGAGTGAAAATGGTTCTGTC+TGG + chr3.3:72746485-72746504 MS.gene75475:CDS 45.0%
! GTAGTGGTATCCCTCTTTTG+TGG - chr3.3:72747572-72747591 None:intergenic 45.0%
! TCTGCATTGGTATAGAGGTC+TGG + chr3.3:72746069-72746088 MS.gene75475:intron 45.0%
! TCTTTTGCGGCTCTCAAATC+CGG - chr3.3:72746202-72746221 None:intergenic 45.0%
! TGGTATCCCTCTTTTGTGGT+AGG - chr3.3:72747568-72747587 None:intergenic 45.0%
! TTTCCATAAGGCGCCTAACA+AGG + chr3.3:72746544-72746563 MS.gene75475:CDS 45.0%
!! ACCCCTCTTTATTTGGGTTG+GGG + chr3.3:72744081-72744100 MS.gene75475:CDS 45.0%
!! ATTTGCTCTGAGAACCATGG+TGG - chr3.3:72745220-72745239 None:intergenic 45.0%
!! CGTTTTAACCTCAACCTCGT+TGG + chr3.3:72744147-72744166 MS.gene75475:intron 45.0%
!! GGAAGGGCTGATTATTTTGC+AGG + chr3.3:72744929-72744948 MS.gene75475:intron 45.0%
!! GGAATTTGCTCTGAGAACCA+TGG - chr3.3:72745223-72745242 None:intergenic 45.0%
!! ATAATAATTACATAAAAATA+TGG - chr3.3:72746628-72746647 None:intergenic 5.0%
!! TAATAATTACATAAAAATAT+GGG - chr3.3:72746627-72746646 None:intergenic 5.0%
AAATCCGGAGAGCCCTGAAT+GGG - chr3.3:72746187-72746206 None:intergenic 50.0%
AGGTCTGGACTATTCCCTCA+TGG + chr3.3:72746084-72746103 MS.gene75475:intron 50.0%
ATGCCTGTGTATGCTAGAGG+GGG - chr3.3:72744793-72744812 None:intergenic 50.0%
CACTGCCATGGATATCGATC+CGG + chr3.3:72746825-72746844 MS.gene75475:CDS 50.0%
CAGAAGGAACAGTTCAGCGA+TGG + chr3.3:72747360-72747379 MS.gene75475:CDS 50.0%
CAGTACTGCATGCCACACTA+GGG - chr3.3:72747800-72747819 None:intergenic 50.0%
CATAGAGGACCTGATTGGAG+TGG + chr3.3:72743541-72743560 MS.gene75475:CDS 50.0%
CCGGACAACAGAACACCAAA+GGG - chr3.3:72745957-72745976 None:intergenic 50.0%
CTGTGATATCATGCAGGCTG+TGG + chr3.3:72745908-72745927 MS.gene75475:intron 50.0%
CTTAGACACCAACGAGGTTG+AGG - chr3.3:72744158-72744177 None:intergenic 50.0%
CTTCCTTGTTAGGCGCCTTA+TGG - chr3.3:72746550-72746569 None:intergenic 50.0%
GAACAGTTCAGCGATGGTGT+CGG + chr3.3:72747366-72747385 MS.gene75475:CDS 50.0%
GAAGGTGGTACAATCCACCA+TGG + chr3.3:72745203-72745222 MS.gene75475:CDS 50.0%
GCATCATCGAATTGTCTCGC+AGG + chr3.3:72743512-72743531 MS.gene75475:CDS 50.0%
GCCCCAACCCAAATAAAGAG+GGG - chr3.3:72744085-72744104 None:intergenic 50.0%
GCTATTGTGGACCCTACTTC+TGG + chr3.3:72743607-72743626 MS.gene75475:CDS 50.0%
GGATTTGAGAGCCGCAAAAG+AGG + chr3.3:72746201-72746220 MS.gene75475:CDS 50.0%
GGCCCCAACCCAAATAAAGA+GGG - chr3.3:72744086-72744105 None:intergenic 50.0%
GTAACTGTGATCCCCACTGA+CGG - chr3.3:72746043-72746062 None:intergenic 50.0%
GTGCGGAATCTTAGCAGTGT+TGG + chr3.3:72743456-72743475 MS.gene75475:CDS 50.0%
TAACTGTGATCCCCACTGAC+GGG - chr3.3:72746042-72746061 None:intergenic 50.0%
TCCGGACAACAGAACACCAA+AGG - chr3.3:72745958-72745977 None:intergenic 50.0%
TGCGACATAGAGGACCTGAT+TGG + chr3.3:72743536-72743555 MS.gene75475:CDS 50.0%
TGGCCCCAACCCAAATAAAG+AGG - chr3.3:72744087-72744106 None:intergenic 50.0%
! TAGCAAGACGTTGATGAGCG+AGG - chr3.3:72743591-72743610 None:intergenic 50.0%
! TGATCCAACGGTTTTGCGTG+AGG + chr3.3:72745255-72745274 MS.gene75475:CDS 50.0%
! TTTGCGTGAGGCCTTTGAGA+GGG + chr3.3:72745267-72745286 MS.gene75475:CDS 50.0%
! TTTTGCGTGAGGCCTTTGAG+AGG + chr3.3:72745266-72745285 MS.gene75475:CDS 50.0%
!! AACTTCGGCTTGGGGTATAG+AGG + chr3.3:72746768-72746787 MS.gene75475:CDS 50.0%
!! CCCTTTGGTGTTCTGTTGTC+CGG + chr3.3:72745954-72745973 MS.gene75475:CDS 50.0%
!! TATTTGGGTTGGGGCCATGA+TGG + chr3.3:72744090-72744109 MS.gene75475:CDS 50.0%
!! TTTGGTGTTCTGTTGTCCGG+AGG + chr3.3:72745957-72745976 MS.gene75475:CDS 50.0%
AAGGCCTCACGCAAAACCGT+TGG - chr3.3:72745262-72745281 None:intergenic 55.0%
AAGTGACGAGTCCAGTCCTC+CGG - chr3.3:72745976-72745995 None:intergenic 55.0%
AATCCGGAGAGCCCTGAATG+GGG - chr3.3:72746186-72746205 None:intergenic 55.0%
AGCTGCATGAACACCAAGCG+CGG - chr3.3:72747880-72747899 None:intergenic 55.0%
ATACTGACACTGCCCGTCAG+TGG + chr3.3:72746027-72746046 MS.gene75475:CDS 55.0%
CAAATCCGGAGAGCCCTGAA+TGG - chr3.3:72746188-72746207 None:intergenic 55.0%
CCACTCCGGATCGATATCCA+TGG - chr3.3:72746833-72746852 None:intergenic 55.0%
CCATGGATATCGATCCGGAG+TGG + chr3.3:72746830-72746849 MS.gene75475:CDS 55.0%
CTGTGGAATGGGATGCAGCA+TGG + chr3.3:72747826-72747845 MS.gene75475:CDS 55.0%
GCAGTACTGCATGCCACACT+AGG - chr3.3:72747801-72747820 None:intergenic 55.0%
GTTGGGGCCATGATGGTATG+TGG + chr3.3:72744097-72744116 MS.gene75475:intron 55.0%
TACTGACACTGCCCGTCAGT+GGG + chr3.3:72746028-72746047 MS.gene75475:CDS 55.0%
TCAGCATTGCGTCTGTGACC+TGG - chr3.3:72747513-72747532 None:intergenic 55.0%
TCTCGCAGGTTGCGACATAG+AGG + chr3.3:72743526-72743545 MS.gene75475:CDS 55.0%
TGCCTGTGTATGCTAGAGGG+GGG - chr3.3:72744792-72744811 None:intergenic 55.0%
TGTTCTGTTGTCCGGAGGAC+TGG + chr3.3:72745962-72745981 MS.gene75475:CDS 55.0%
TTCGATGATGCGAGCGCGTT+TGG - chr3.3:72743503-72743522 None:intergenic 55.0%
! AGAGGCACGTGTACCGTTCT+TGG + chr3.3:72746786-72746805 MS.gene75475:CDS 55.0%
! CTCGTCACTTGTTGCTGCAG+TGG + chr3.3:72745986-72746005 MS.gene75475:CDS 55.0%
! GCGATGGTGTCGGATACAGT+TGG + chr3.3:72747376-72747395 MS.gene75475:CDS 55.0%
!! CATTTCAACAGGGTGCTGCC+AGG + chr3.3:72747757-72747776 MS.gene75475:intron 55.0%
ACTGACACTGCCCGTCAGTG+GGG + chr3.3:72746029-72746048 MS.gene75475:CDS 60.0%
AGTTCCAGGAGGCCCTAGTG+TGG + chr3.3:72747785-72747804 MS.gene75475:CDS 60.0%
ATCCGGAGAGCCCTGAATGG+GGG - chr3.3:72746185-72746204 None:intergenic 60.0%
GAGCGGCTTAGACACCAACG+AGG - chr3.3:72744164-72744183 None:intergenic 60.0%
GCCAGGTCAACAGTTCCAGG+AGG + chr3.3:72747774-72747793 MS.gene75475:CDS 60.0%
GCCTCCTGGAACTGTTGACC+TGG - chr3.3:72747778-72747797 None:intergenic 60.0%
GCCTGTGTATGCTAGAGGGG+GGG - chr3.3:72744791-72744810 None:intergenic 60.0%
GCGGCAGCCACATACCATCA+TGG - chr3.3:72744107-72744126 None:intergenic 60.0%
GCTGCCAGGTCAACAGTTCC+AGG + chr3.3:72747771-72747790 MS.gene75475:CDS 60.0%
TCCCCCCCTCTAGCATACAC+AGG + chr3.3:72744787-72744806 MS.gene75475:intron 60.0%
TTCCCCCATTCAGGGCTCTC+CGG + chr3.3:72746180-72746199 MS.gene75475:intron 60.0%
CAAGCGCGGCACGACCTGAA+GGG - chr3.3:72747866-72747885 None:intergenic 65.0%
CATGCCACACTAGGGCCTCC+TGG - chr3.3:72747792-72747811 None:intergenic 65.0%
CCAAGCGCGGCACGACCTGA+AGG - chr3.3:72747867-72747886 None:intergenic 70.0%
CCTTCAGGTCGTGCCGCGCT+TGG + chr3.3:72747864-72747883 MS.gene75475:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 72743454 72747956 72743454 ID=MS.gene75475
chr3.3 mRNA 72743454 72747956 72743454 ID=MS.gene75475.t1;Parent=MS.gene75475
chr3.3 exon 72743454 72743672 72743454 ID=MS.gene75475.t1.exon1;Parent=MS.gene75475.t1
chr3.3 CDS 72743454 72743672 72743454 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72743787 72743882 72743787 ID=MS.gene75475.t1.exon2;Parent=MS.gene75475.t1
chr3.3 CDS 72743787 72743882 72743787 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72743970 72744111 72743970 ID=MS.gene75475.t1.exon3;Parent=MS.gene75475.t1
chr3.3 CDS 72743970 72744111 72743970 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72744951 72745046 72744951 ID=MS.gene75475.t1.exon4;Parent=MS.gene75475.t1
chr3.3 CDS 72744951 72745046 72744951 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72745194 72745288 72745194 ID=MS.gene75475.t1.exon5;Parent=MS.gene75475.t1
chr3.3 CDS 72745194 72745288 72745194 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72745924 72746085 72745924 ID=MS.gene75475.t1.exon6;Parent=MS.gene75475.t1
chr3.3 CDS 72745924 72746085 72745924 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72746193 72746273 72746193 ID=MS.gene75475.t1.exon7;Parent=MS.gene75475.t1
chr3.3 CDS 72746193 72746273 72746193 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72746374 72746595 72746374 ID=MS.gene75475.t1.exon8;Parent=MS.gene75475.t1
chr3.3 CDS 72746374 72746595 72746374 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72746724 72746858 72746724 ID=MS.gene75475.t1.exon9;Parent=MS.gene75475.t1
chr3.3 CDS 72746724 72746858 72746724 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72747181 72747261 72747181 ID=MS.gene75475.t1.exon10;Parent=MS.gene75475.t1
chr3.3 CDS 72747181 72747261 72747181 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72747345 72747431 72747345 ID=MS.gene75475.t1.exon11;Parent=MS.gene75475.t1
chr3.3 CDS 72747345 72747431 72747345 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72747514 72747621 72747514 ID=MS.gene75475.t1.exon12;Parent=MS.gene75475.t1
chr3.3 CDS 72747514 72747621 72747514 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
chr3.3 exon 72747768 72747956 72747768 ID=MS.gene75475.t1.exon13;Parent=MS.gene75475.t1
chr3.3 CDS 72747768 72747956 72747768 ID=cds.MS.gene75475.t1;Parent=MS.gene75475.t1
Gene Sequence

>MS.gene75475

ATGTGCGGAATCTTAGCAGTGTTGGGTGTGGTCGACAATTCTCAGTCCAAACGCGCTCGCATCATCGAATTGTCTCGCAGGTTGCGACATAGAGGACCTGATTGGAGTGGTTTGCATTGTCATCAAGATTGTTACCTCGCTCATCAACGTCTTGCTATTGTGGACCCTACTTCTGGAGATCAACCTCTTTACAACTATGACAAGACCGTTATTGTCACCGTACGTATCTTATCTTCTATCTAATCTGCACGTTTTTTTTTTTTTTTTATTAAATTGTTTATAATTTGCATGCAGAATTTTGATTTTGTCACATTTTCTGTTCTATGGCATTAGGTTAATGGGGAGATATACAACCACAAAAAATTGAGACAGAAACTGAAATCTCATCAATTTCGAACTGGTAGTGATTGTGAAGTCATTGCTCATCTTGTAAGTGTTTTCTAGAAGGATTATGTTTATTTTACTGTTTTTCATATTATTATGACGAATGATGACTAACTATTTCGATGTGATTAGTATGAAGAATATGGAGAAGAGTTTGTTGATATGCTGGATGGGATGTTCTCATTTGTGCTTCTTGATACTAGAGATAAAAGTTTTATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTATTTGGGTTGGGGCCATGATGGTATGTGGCTGCCGCTTCTTATTGTAACATTTTTACGTTTTAACCTCAACCTCGTTGGTGTCTAAGCCGCTCGAATTGAACCATTTATTGTGCAATTTAAAGCCAATTCCAGAGATGCATTTTGGACATGTAGTGTGCTAAATTGCTAAACTGAAGTGAATTTTATTCGTATAGATTGCCTGTGTAATTTTTTTAAACTGTTAACCAATTGTGATTGTCAGATGATTAAAAACATTTGACTTTCATAACTAATTTCAAAGTCATACATTTAATTGGCAGTGATTTGTTGACAGTGTAAAACTTTTTACATTGAAATTGAAATAAATCATTAATGTATGAGTTCCTATATAAAATTTGTAGCTTCAAATCAATGTATTTTTGTCGTATGTTTTGTAGTATTAGACTATTAGTAAACTTGATGTTGTTTACCCTTTTTTTTTTGAATAAATTGATGTTGTTTACCCTTAATTGCATAGCACATGGATTTTTATAACTCAAGTGAATGTACTAAAGATTGAAAGTAAAATACTAATTTCTTACTAAATTATGAATGATATCCTGCTACATATCTGTATAAACATTAAGGATGACTTTGTTATATCTGCCGATGCTTCTAATGTAGAGGAACATGTCCTAGTTTTTTCAAGGAAATGTAATGAAGCATCTCTTTATCTCTCCCCCCCTCTAGCATACACAGGCATTAATCTTTTACATTCGGCAGTTGCATGATTTTAGGATAGAAAATAAAGAGTTGTCTATACATTTGGTTATGTATTCATGGTATGATTGTTGTTCTTGAATTAGATATATCATTTATGGAAGGGCTGATTATTTTGCAGGATCAATATGGTTTGCGTCTGAAATGAAAGCGCTGATTGATGATTGTGAGCAATTTATATCTTTTCCTCCAGGGCATATATATTCCAGCAAACAGGGTAAAAATAATGCAACTCGTTATTTTTTCCGATTATGGTTACTCTTGTAAACTCAATTCCATTTGTTTTTCTCCTTCTACTGTCTAAATTTTACTCCAAGATAAGATACACACTTACATATCCTGTTAAACTTTGCTGTCTTTGCAGGAGGATTAAGAAGGTGGTACAATCCACCATGGTTCTCAGAGCAAATTCCATCAACACGCTATGATCCAACGGTTTTGCGTGAGGCCTTTGAGAGGGTTAGCTATTCCTGTCTCATCCATTGAATTATTTCATCGTTTGAACTTTAGAATGTCCAGTTCTGCTTGGTGTTGTTATGTAGTGGCTATAGCACATTAGCATAGTTGAATTTGAACAAATCACTATCGTTTCACAATACACTATCTGTCTATTTAGCACAAAATGTTGTCAAATAGCGGCAAAAGTGAGCTATGCCACTGTTTTGTAGCGGAATTCGAACAAACTGCTATTTTCCGCATTCCATAATTGACAGCACTGGTTCTACTGCATTTTCTTAAAGAACTGCTTCAGACTATTTTCAACTCTCCCTGGAATTTTAAAGCATCCTCACTTTTATTTTGTCTATAATATCATTTGCAACAAACTTAGGAGTGTTATGTCATAACTAGAGGTGTTGAAACTGAAATACACCATGAAATGCAACTTAATGCCTTTTGAGAAATTATACGTAAATTCCCATAAGCTCATGATTGGAATTTGGAGCTGATTACTATGTTCTAGTTGGTGAAGAAAAAATAATATCATTTTTATTCTTTTCACATTTAGTGACTTCCTTTGATGTAGTTGATACTAAGTCATAACTCTACGAACATCCTTTTTAACTTTTTCTTGGTTATACTGTGATATCATGCAGGCTGTGGTTAAGAGAATGATGACTGATGTACCCTTTGGTGTTCTGTTGTCCGGAGGACTGGACTCGTCACTTGTTGCTGCAGTGGCCAATAGATATTTGGCTGATACTGACACTGCCCGTCAGTGGGGATCACAGTTACATACTTTCTGCATTGGTATAGAGGTCTGGACTATTCCCTCATGGTTAAAATGAGCTGTATTATACTTCTTCAGTCCATAAGTAATAGTAGTTATATGCTTCATGACATGACTTAATTTTCCCCCATTCAGGGCTCTCCGGATTTGAGAGCCGCAAAAGAGGTAGCAAATTATCTTGGCACTTGCCACCACGAACTTCATTTCACAGTTCAGGTGACGATTTCTCCCTTTATCTACCATTTTACCTTGAGCAGACGAGATTTTTATTGCTAGCTCGAAGGTAATCTAATATTCTATTTTCGCTATATATCAGGAAGGTATAGATGCACTTGAGGAAGTCATTTACCATATTGAAACATATGATGTAACGACTGTCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATCAAATCATTGGGAGTGAAAATGGTTCTGTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCGCCTAACAAGGAAGAGCTTCATCAAGAAACATGCCGAAAAGTAATATACCATAATTCTTGTGCTTATCCCCATATTTTTATGTAATTATTATGTGCATCTTTATCTCTTCATTCCTGTGTACTTTTACCCGTTTATTCAAGTTTTTGGTGTCTTTGATGATTTGACAGATTAAAGCACTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACTTCGGCTTGGGGTATAGAGGCACGTGTACCGTTCTTGGATAAAGAATTTATCAACACTGCCATGGATATCGATCCGGAGTGGAAAATGGTATTGTAACTTTACTTCTTTCTTGGTGTTCATCTCGTCATGCAGCATAAGAGGCTGAGCTATAGGCTGTCTTATGATTGGGCTGCCTGCATTGTTGATTGAACATTGAGATTATGTTAACTTGCAGTTAAATAAATTCATATGTCATTTCAACTTTCTGCTTTTGTTTAAATGTTCCAGTTTTCTTGTAAAATAAATTTGTCTGTGGACAGTTCTAAGTTTCTAACAGATCTTTGTGAAATTGAATTTACTAGTTAGTGAAGTTAATCTTATTAACTTCATTTTTTTTATCACCTCATGAAATTAACGACAAATTGCACAGATAAAGCCTGATATTGAAAGGATAGAGAAATGGGTATTGCGCAATGCATTTGATGATGATGAGAATCCATATTTGCCAAAGGTTTGTATCAATCAACTTCTGCATTATGCTTGTTCGTATGTCTTGAAGGATTTCTGAAATAATTTTATTCTTCTATTTTTCAGCACATATTGTACAGGCAGAAGGAACAGTTCAGCGATGGTGTCGGATACAGTTGGATTGATGGTTTGAAGGATCATGCTAACGAACAAGTAGGCTCTAACCTGTGACATTGAACTGAATAACTCATTTTTATAGAATTCCATTGACATTATATACTTGATAAATGGCCAGGTCACAGACGCAATGCTGAAGCATGCCAACTTTGTTTACCCTGAAAACACTCCTACCACAAAAGAGGGATACCACTACAGGACAATTTTTGAGAAGTTATTTCCAAAGGTGAATTGTATAGTCTTTTGCATCTTAAAATAATATATACCTTTTCATCATAACCTTGACCAATTTTAAATTTGAACATGAACTTGTTTACAAATTTCGATCATGCCAAACCACTTGACTATGCATGAACCATTTCATTTCAACAGGGTGCTGCCAGGTCAACAGTTCCAGGAGGCCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCAGCATGGTCCAAAAATCTGGACCCTTCAGGTCGTGCCGCGCTTGGTGTTCATGCAGCTGCATACAAGGATGCAGTAGATATCAAAATAAAAGAGCCCGACAATGGATCCCTCTAA

Protein sequence

>MS.gene75475.t1

MCGILAVLGVVDNSQSKRARIIELSRRLRHRGPDWSGLHCHQDCYLAHQRLAIVDPTSGDQPLYNYDKTVIVTVNGEIYNHKKLRQKLKSHQFRTGSDCEVIAHLYEEYGEEFVDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYLGWGHDGSIWFASEMKALIDDCEQFISFPPGHIYSSKQGGLRRWYNPPWFSEQIPSTRYDPTVLREAFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVANRYLADTDTARQWGSQLHTFCIGIEGSPDLRAAKEVANYLGTCHHELHFTVQEGIDALEEVIYHIETYDVTTVRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHQETCRKIKALHLYDCLRANKSTSAWGIEARVPFLDKEFINTAMDIDPEWKMIKPDIERIEKWVLRNAFDDDENPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANEQVTDAMLKHANFVYPENTPTTKEGYHYRTIFEKLFPKGAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHAAAYKDAVDIKIKEPDNGSL