Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79217.t1 | XP_003601953.1 | 98.6 | 570 | 8 | 0 | 1 | 570 | 1 | 570 | 0.00E+00 | 1180.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79217.t1 | Q9LV77 | 85.3 | 556 | 82 | 0 | 1 | 556 | 1 | 556 | 1.3e-299 | 1029.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79217.t1 | G7J3R9 | 98.6 | 570 | 8 | 0 | 1 | 570 | 1 | 570 | 0.0e+00 | 1180.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049233 | MS.gene79217 | 0.807024 | 6.19E-50 | -1.69E-46 |
| MS.gene049260 | MS.gene79217 | 0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene049297 | MS.gene79217 | 0.82151 | 3.89E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene79217 | 0.809323 | 2.00E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene79217 | 0.844924 | 5.59E-59 | -1.69E-46 |
| MS.gene049389 | MS.gene79217 | 0.812127 | 4.96E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene79217 | 0.824536 | 7.65E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene79217 | 0.803875 | 2.83E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene79217 | 0.872602 | 2.80E-67 | -1.69E-46 |
| MS.gene050076 | MS.gene79217 | 0.828374 | 9.32E-55 | -1.69E-46 |
| MS.gene050099 | MS.gene79217 | 0.841256 | 5.31E-58 | -1.69E-46 |
| MS.gene050301 | MS.gene79217 | 0.903322 | 3.91E-79 | -1.69E-46 |
| MS.gene050319 | MS.gene79217 | -0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene050432 | MS.gene79217 | 0.813268 | 2.79E-51 | -1.69E-46 |
| MS.gene050516 | MS.gene79217 | 0.832147 | 1.12E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene79217 | 0.861316 | 1.12E-63 | -1.69E-46 |
| MS.gene050560 | MS.gene79217 | 0.807225 | 5.61E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene79217 | 0.807148 | 5.82E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene79217 | 0.859063 | 5.36E-63 | -1.69E-46 |
| MS.gene05119 | MS.gene79217 | -0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene79217 | 0.81678 | 4.63E-52 | -1.69E-46 |
| MS.gene051662 | MS.gene79217 | 0.825529 | 4.46E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene79217 | 0.868403 | 6.70E-66 | -1.69E-46 |
| MS.gene051860 | MS.gene79217 | 0.855257 | 7.12E-62 | -1.69E-46 |
| MS.gene051877 | MS.gene79217 | 0.80051 | 1.39E-48 | -1.69E-46 |
| MS.gene052078 | MS.gene79217 | 0.824484 | 7.87E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene79217 | 0.839497 | 1.53E-57 | -1.69E-46 |
| MS.gene052207 | MS.gene79217 | 0.93644 | 1.73E-97 | -1.69E-46 |
| MS.gene052253 | MS.gene79217 | 0.824829 | 6.53E-54 | -1.69E-46 |
| MS.gene052287 | MS.gene79217 | 0.851924 | 6.46E-61 | -1.69E-46 |
| MS.gene052326 | MS.gene79217 | 0.833167 | 6.23E-56 | -1.69E-46 |
| MS.gene052340 | MS.gene79217 | 0.809852 | 1.54E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene79217 | 0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene053520 | MS.gene79217 | 0.808691 | 2.73E-50 | -1.69E-46 |
| MS.gene053559 | MS.gene79217 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene79217 | 0.896253 | 4.40E-76 | -1.69E-46 |
| MS.gene054011 | MS.gene79217 | 0.815503 | 8.94E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene79217 | 0.801427 | 9.05E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene79217 | 0.829228 | 5.79E-55 | -1.69E-46 |
| MS.gene054473 | MS.gene79217 | 0.883296 | 5.06E-71 | -1.69E-46 |
| MS.gene05455 | MS.gene79217 | 0.869586 | 2.77E-66 | -1.69E-46 |
| MS.gene054930 | MS.gene79217 | 0.817991 | 2.47E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene79217 | 0.829055 | 6.38E-55 | -1.69E-46 |
| MS.gene054983 | MS.gene79217 | 0.810409 | 1.17E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene79217 | 0.863482 | 2.41E-64 | -1.69E-46 |
| MS.gene055303 | MS.gene79217 | 0.832737 | 7.97E-56 | -1.69E-46 |
| MS.gene055358 | MS.gene79217 | 0.803171 | 3.96E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene79217 | 0.893843 | 4.31E-75 | -1.69E-46 |
| MS.gene055422 | MS.gene79217 | 0.884508 | 1.81E-71 | -1.69E-46 |
| MS.gene055428 | MS.gene79217 | 0.859938 | 2.92E-63 | -1.69E-46 |
| MS.gene055604 | MS.gene79217 | 0.848735 | 5.07E-60 | -1.69E-46 |
| MS.gene056069 | MS.gene79217 | -0.815351 | 9.67E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene79217 | 0.824482 | 7.88E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene79217 | 0.812898 | 3.36E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene79217 | 0.807026 | 6.18E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene79217 | 0.853782 | 1.90E-61 | -1.69E-46 |
| MS.gene056875 | MS.gene79217 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene79217 | 0.811732 | 6.04E-51 | -1.69E-46 |
| MS.gene056931 | MS.gene79217 | 0.86888 | 4.70E-66 | -1.69E-46 |
| MS.gene056933 | MS.gene79217 | 0.871063 | 9.09E-67 | -1.69E-46 |
| MS.gene056935 | MS.gene79217 | 0.85982 | 3.17E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene79217 | 0.806699 | 7.25E-50 | -1.69E-46 |
| MS.gene057121 | MS.gene79217 | 0.881593 | 2.11E-70 | -1.69E-46 |
| MS.gene057245 | MS.gene79217 | 0.847038 | 1.49E-59 | -1.69E-46 |
| MS.gene05733 | MS.gene79217 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene79217 | 0.852866 | 3.48E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene79217 | 0.828038 | 1.12E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene79217 | 0.803097 | 4.10E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene79217 | 0.833579 | 4.92E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene79217 | 0.876003 | 1.97E-68 | -1.69E-46 |
| MS.gene058002 | MS.gene79217 | 0.877417 | 6.39E-69 | -1.69E-46 |
| MS.gene05811 | MS.gene79217 | 0.886962 | 2.17E-72 | -1.69E-46 |
| MS.gene058142 | MS.gene79217 | 0.818777 | 1.64E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene79217 | 0.813273 | 2.78E-51 | -1.69E-46 |
| MS.gene058365 | MS.gene79217 | 0.800735 | 1.25E-48 | -1.69E-46 |
| MS.gene05842 | MS.gene79217 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene79217 | 0.86912 | 3.93E-66 | -1.69E-46 |
| MS.gene058749 | MS.gene79217 | 0.824946 | 6.13E-54 | -1.69E-46 |
| MS.gene058845 | MS.gene79217 | 0.819276 | 1.26E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene79217 | 0.834107 | 3.63E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene79217 | 0.861334 | 1.10E-63 | -1.69E-46 |
| MS.gene059342 | MS.gene79217 | 0.808127 | 3.61E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene79217 | 0.848012 | 8.04E-60 | -1.69E-46 |
| MS.gene059597 | MS.gene79217 | 0.861652 | 8.82E-64 | -1.69E-46 |
| MS.gene059676 | MS.gene79217 | 0.82265 | 2.12E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene79217 | 0.828186 | 1.03E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene79217 | 0.831097 | 2.02E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene79217 | 0.835053 | 2.10E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene79217 | 0.853295 | 2.63E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene79217 | 0.827879 | 1.23E-54 | -1.69E-46 |
| MS.gene060314 | MS.gene79217 | 0.802891 | 4.52E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene79217 | 0.859409 | 4.22E-63 | -1.69E-46 |
| MS.gene060476 | MS.gene79217 | 0.833542 | 5.02E-56 | -1.69E-46 |
| MS.gene060559 | MS.gene79217 | 0.881312 | 2.66E-70 | -1.69E-46 |
| MS.gene061049 | MS.gene79217 | 0.847426 | 1.16E-59 | -1.69E-46 |
| MS.gene061051 | MS.gene79217 | -0.811648 | 6.30E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene79217 | 0.812687 | 3.74E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79217 | MS.gene009829 | PPI |
| MS.gene79217 | MS.gene072874 | PPI |
| MS.gene79217 | MS.gene035805 | PPI |
| MS.gene79217 | MS.gene53989 | PPI |
| MS.gene79217 | MS.gene50183 | PPI |
| MS.gene79217 | MS.gene008693 | PPI |
| MS.gene79217 | MS.gene57014 | PPI |
| MS.gene79217 | MS.gene064542 | PPI |
| MS.gene79217 | MS.gene32653 | PPI |
| MS.gene79217 | MS.gene05726 | PPI |
| MS.gene79217 | MS.gene80238 | PPI |
| MS.gene38765 | MS.gene79217 | PPI |
| MS.gene79217 | MS.gene048489 | PPI |
| MS.gene017760 | MS.gene79217 | PPI |
| MS.gene79217 | MS.gene75475 | PPI |
| MS.gene79217 | MS.gene73119 | PPI |
| MS.gene79217 | MS.gene045117 | PPI |
| MS.gene79217 | MS.gene03964 | PPI |
| MS.gene79217 | MS.gene014008 | PPI |
| MS.gene79217 | MS.gene052207 | PPI |
| MS.gene79217 | MS.gene014853 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79217.t1 | MTR_3g087220 | 98.596 | 570 | 8 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1182 |
| MS.gene79217.t1 | MTR_5g071360 | 78.058 | 556 | 122 | 0 | 1 | 556 | 1 | 556 | 0.0 | 940 |
| MS.gene79217.t1 | MTR_3g464580 | 74.868 | 569 | 140 | 2 | 1 | 566 | 1 | 569 | 0.0 | 917 |
| MS.gene79217.t1 | MTR_5g071360 | 77.451 | 510 | 115 | 0 | 1 | 510 | 1 | 510 | 0.0 | 856 |
| MS.gene79217.t1 | MTR_3g464580 | 75.835 | 509 | 122 | 1 | 1 | 508 | 1 | 509 | 0.0 | 834 |
| MS.gene79217.t1 | MTR_3g464580 | 76.786 | 448 | 102 | 2 | 1 | 447 | 1 | 447 | 0.0 | 737 |
| MS.gene79217.t1 | MTR_5g069310 | 69.298 | 114 | 35 | 0 | 443 | 556 | 2 | 115 | 1.55e-51 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79217.t1 | AT5G10240 | 85.379 | 554 | 81 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1023 |
| MS.gene79217.t1 | AT5G65010 | 85.636 | 550 | 79 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1021 |
| MS.gene79217.t1 | AT5G65010 | 85.481 | 551 | 79 | 1 | 1 | 550 | 1 | 551 | 0.0 | 1016 |
| MS.gene79217.t1 | AT5G10240 | 84.838 | 554 | 83 | 1 | 1 | 554 | 1 | 553 | 0.0 | 1013 |
| MS.gene79217.t1 | AT3G47340 | 75.575 | 565 | 137 | 1 | 1 | 565 | 1 | 564 | 0.0 | 936 |
| MS.gene79217.t1 | AT3G47340 | 76.575 | 508 | 119 | 0 | 1 | 508 | 1 | 508 | 0.0 | 857 |
| MS.gene79217.t1 | AT3G47340 | 77.458 | 417 | 94 | 0 | 1 | 417 | 1 | 417 | 0.0 | 716 |
| MS.gene79217.t1 | AT3G47340 | 77.815 | 302 | 67 | 0 | 116 | 417 | 1 | 302 | 0.0 | 522 |
Find 135 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCATTACCCCTCTTTATT+TGG | 0.114873 | 3.1:+70217285 | MS.gene79217:CDS |
| CCAAGCCGAAGTTGATTTAT+TGG | 0.156555 | 3.1:-70219971 | None:intergenic |
| ATACAAACCTTTGGCAAATA+TGG | 0.166150 | 3.1:-70221351 | None:intergenic |
| TTCTCTATCCTTTCAATATC+AGG | 0.209485 | 3.1:-70221291 | None:intergenic |
| GAAGGTTCAGATGAAATATT+TGG | 0.221785 | 3.1:+70219722 | MS.gene79217:CDS |
| CAAATCATTGGGAGTGAAAA+TGG | 0.232355 | 3.1:+70219688 | MS.gene79217:CDS |
| TACCCCTCTTTATTTGGGTT+GGG | 0.252968 | 3.1:+70217291 | MS.gene79217:CDS |
| GGCATTACCCCTCTTTATTT+GGG | 0.262355 | 3.1:+70217286 | MS.gene79217:CDS |
| CTTCCTTGTTAGGCGCCTTA+TGG | 0.267987 | 3.1:-70219760 | None:intergenic |
| TTCTATGGCGTTAGGTTAAT+GGG | 0.271922 | 3.1:+70216984 | MS.gene79217:intron |
| GTTCTATGGCGTTAGGTTAA+TGG | 0.276233 | 3.1:+70216983 | MS.gene79217:intron |
| GCTATTGTGGACCCTACTTC+TGG | 0.276442 | 3.1:+70216819 | MS.gene79217:CDS |
| TGATGAAGCTCTTCCTTGTT+AGG | 0.297491 | 3.1:-70219770 | None:intergenic |
| TGCAGTGGCCAATAGATATT+TGG | 0.298358 | 3.1:+70219214 | MS.gene79217:CDS |
| TTCGATGATGCGAGCGCGTT+TGG | 0.303802 | 3.1:-70216712 | None:intergenic |
| ATTGCTGCTCGTGATGCTAT+TGG | 0.320060 | 3.1:+70217265 | MS.gene79217:CDS |
| TGTGATTAGTATGAAGAATA+TGG | 0.322666 | 3.1:+70217172 | MS.gene79217:intron |
| CAATAAATCAACTTCGGCTT+GGG | 0.326748 | 3.1:+70219972 | MS.gene79217:CDS |
| TATCGATCCGGAGTGGAAAA+TGG | 0.332343 | 3.1:+70220050 | MS.gene79217:CDS |
| CGAACTTCATTTCACAGTTC+AGG | 0.340310 | 3.1:+70219465 | MS.gene79217:CDS |
| TTACCCCTCTTTATTTGGGT+TGG | 0.360345 | 3.1:+70217290 | MS.gene79217:CDS |
| GCATATATATTCCAGCAAAC+AGG | 0.371801 | 3.1:+70218237 | MS.gene79217:CDS |
| AGAGGCACGTGTACCGTTCT+TGG | 0.383283 | 3.1:+70219999 | MS.gene79217:CDS |
| ACCCCTCTTTATTTGGGTTG+GGG | 0.385041 | 3.1:+70217292 | MS.gene79217:CDS |
| TGTTCTGTTGTCCGGAGGAC+TGG | 0.389790 | 3.1:+70219175 | MS.gene79217:CDS |
| CCCTTTGGTGTTCTGTTGTC+CGG | 0.394985 | 3.1:+70219167 | MS.gene79217:CDS |
| TTACATCATATGTTTCAATA+TGG | 0.407697 | 3.1:-70219619 | None:intergenic |
| CCTTCAGGTCGTGCCGCGCT+TGG | 0.420882 | 3.1:+70221968 | MS.gene79217:CDS |
| GCTGCCAGGTCAACAGTTCC+AGG | 0.421132 | 3.1:+70221875 | MS.gene79217:CDS |
| TACTTTCTGCATTGGTATAG+AGG | 0.424643 | 3.1:+70219277 | MS.gene79217:CDS |
| CAGTTGGATTGATGGTTTGA+AGG | 0.424749 | 3.1:+70221496 | MS.gene79217:CDS |
| GTCGGATACAGTTGGATTGA+TGG | 0.430598 | 3.1:+70221488 | MS.gene79217:CDS |
| GTTGGATCATAGCGTGTTGA+TGG | 0.432444 | 3.1:-70218454 | None:intergenic |
| TCTTTAGAGGGATCCATTGT+CGG | 0.443265 | 3.1:-70222041 | None:intergenic |
| AGTATCAGCCAAATATCTAT+TGG | 0.448146 | 3.1:-70219222 | None:intergenic |
| TACTGACGCTGCCCGTCAGT+GGG | 0.449523 | 3.1:+70219241 | MS.gene79217:CDS |
| TATTGAAAGGATAGAGAAAT+GGG | 0.451135 | 3.1:+70221296 | MS.gene79217:CDS |
| CATGCCACACTAGGGCCTCC+TGG | 0.457389 | 3.1:-70221893 | None:intergenic |
| ATATTGAAAGGATAGAGAAA+TGG | 0.459884 | 3.1:+70221295 | MS.gene79217:CDS |
| TATTTGGGTTGGGGCCATGA+TGG | 0.462409 | 3.1:+70217301 | MS.gene79217:CDS |
| TACTGCAAAAGCTGTGGAAT+GGG | 0.464980 | 3.1:+70221919 | MS.gene79217:CDS |
| AGGTTACCTGTATTTCCATA+AGG | 0.465018 | 3.1:+70219745 | MS.gene79217:CDS |
| AAATCTCATCAATTTCGAAC+TGG | 0.470336 | 3.1:+70217043 | MS.gene79217:CDS |
| GCAGTACTGCATGCCACACT+AGG | 0.471392 | 3.1:-70221902 | None:intergenic |
| TAGGCGCCTTATGGAAATAC+AGG | 0.475864 | 3.1:-70219751 | None:intergenic |
| AGAAGAGTTTGTTGATATGC+TGG | 0.476984 | 3.1:+70217195 | MS.gene79217:CDS |
| ATACTGACGCTGCCCGTCAG+TGG | 0.477781 | 3.1:+70219240 | MS.gene79217:CDS |
| AAAGAGGTAGCAAATTATCT+TGG | 0.479356 | 3.1:+70219430 | MS.gene79217:CDS |
| AAGTTGATTTATTGGCTCTC+AGG | 0.481018 | 3.1:-70219963 | None:intergenic |
| CTCGTCACTTGTTGCTGCAG+TGG | 0.482865 | 3.1:+70219199 | MS.gene79217:CDS |
| CAATGCAAACCACTCCAATC+AGG | 0.489191 | 3.1:-70216762 | None:intergenic |
| CTTTAGAGGGATCCATTGTC+GGG | 0.500502 | 3.1:-70222040 | None:intergenic |
| AGAGGTTGATCTCCAGAAGT+AGG | 0.500746 | 3.1:-70216831 | None:intergenic |
| GATACGTACGGTGACAATAA+CGG | 0.505224 | 3.1:-70216871 | None:intergenic |
| CATTTCAACAGGGTGCTGCC+AGG | 0.506834 | 3.1:+70221861 | MS.gene79217:intron |
| CCAATAAATCAACTTCGGCT+TGG | 0.506921 | 3.1:+70219971 | MS.gene79217:CDS |
| GTGCGGAATCTTAGCAGTGT+TGG | 0.507911 | 3.1:+70216668 | MS.gene79217:CDS |
| TGCGGAATCTTAGCAGTGTT+GGG | 0.508911 | 3.1:+70216669 | MS.gene79217:CDS |
| CAGTTACATACTTTCTGCAT+TGG | 0.510357 | 3.1:+70219269 | MS.gene79217:CDS |
| AACTTCGGCTTGGGGTATAG+AGG | 0.510802 | 3.1:+70219981 | MS.gene79217:CDS |
| TCATCAACGTCTTGCTATTG+TGG | 0.511777 | 3.1:+70216806 | MS.gene79217:CDS |
| AGATTTGAGAGCCGCAAAAG+AGG | 0.512270 | 3.1:+70219414 | MS.gene79217:CDS |
| CACTGCCATGGATATCGATC+CGG | 0.514410 | 3.1:+70220038 | MS.gene79217:CDS |
| TGCGACATAGAGGACCTGAT+TGG | 0.528704 | 3.1:+70216748 | MS.gene79217:CDS |
| GTCTTGTCATAGTTGTAAAG+AGG | 0.529718 | 3.1:-70216849 | None:intergenic |
| GGAGTGAAAATGGTTCTGTC+TGG | 0.532933 | 3.1:+70219698 | MS.gene79217:CDS |
| TTTCTGGACATAAGAAACAT+TGG | 0.539930 | 3.1:-70219662 | None:intergenic |
| GCCTCCTGGAACTGTTGACC+TGG | 0.540604 | 3.1:-70221879 | None:intergenic |
| GGTTCAGATGAAATATTTGG+AGG | 0.542536 | 3.1:+70219725 | MS.gene79217:CDS |
| AGCTGCATGAACACCAAGCG+CGG | 0.545486 | 3.1:-70221981 | None:intergenic |
| ATAAATTCTTTATCCAAGAA+CGG | 0.547808 | 3.1:-70220012 | None:intergenic |
| TGGCCCCAACCCAAATAAAG+AGG | 0.550694 | 3.1:-70217295 | None:intergenic |
| AAGTGACGAGTCCAGTCCTC+CGG | 0.552950 | 3.1:-70219186 | None:intergenic |
| AAACACTCCTACCACAAAAG+AGG | 0.557038 | 3.1:+70221662 | MS.gene79217:CDS |
| AAAATAAAAGAGCCCGACAA+TGG | 0.557915 | 3.1:+70222028 | MS.gene79217:CDS |
| GAGGTTGATCTCCAGAAGTA+GGG | 0.558161 | 3.1:-70216830 | None:intergenic |
| TGTTCATGCAGCTGCATACA+AGG | 0.562587 | 3.1:+70221991 | MS.gene79217:CDS |
| AACACTCCTACCACAAAAGA+GGG | 0.564176 | 3.1:+70221663 | MS.gene79217:CDS |
| CCAAGCGCGGCACGACCTGA+AGG | 0.564595 | 3.1:-70221968 | None:intergenic |
| TTTGCGTGAGGCCTTTGAGA+GGG | 0.566242 | 3.1:+70218480 | MS.gene79217:CDS |
| ATGATGACTGATGTACCCTT+TGG | 0.566933 | 3.1:+70219152 | MS.gene79217:CDS |
| GGCCCCAACCCAAATAAAGA+GGG | 0.568153 | 3.1:-70217294 | None:intergenic |
| AGTTTGTTGATATGCTGGAT+GGG | 0.570850 | 3.1:+70217200 | MS.gene79217:CDS |
| AATCTTAGCAGTGTTGGGTG+TGG | 0.573813 | 3.1:+70216674 | MS.gene79217:CDS |
| AGAATTTATCAACACTGCCA+TGG | 0.574909 | 3.1:+70220026 | MS.gene79217:CDS |
| TTGCTGGAATATATATGCCC+TGG | 0.575185 | 3.1:-70218232 | None:intergenic |
| AAGGCCTCACGCAAAACCGT+TGG | 0.575646 | 3.1:-70218472 | None:intergenic |
| TAACTGTGATCCCCACTGAC+GGG | 0.578963 | 3.1:-70219252 | None:intergenic |
| GCGGCAGCCACATACCATCA+TGG | 0.580966 | 3.1:-70217315 | None:intergenic |
| CCGGACAACAGAACACCAAA+GGG | 0.583577 | 3.1:-70219167 | None:intergenic |
| AGATAAAGCCTGATATTGAA+AGG | 0.584487 | 3.1:+70221283 | MS.gene79217:intron |
| CATATATATTCCAGCAAACA+GGG | 0.584924 | 3.1:+70218238 | MS.gene79217:CDS |
| GCGATGGTGTCGGATACAGT+TGG | 0.589745 | 3.1:+70221480 | MS.gene79217:CDS |
| TTTCCATAAGGCGCCTAACA+AGG | 0.590033 | 3.1:+70219757 | MS.gene79217:CDS |
| CAAAAGAGGGATACCACTAC+AGG | 0.590975 | 3.1:+70221676 | MS.gene79217:CDS |
| GAGAGCCAATAAATCAACTT+CGG | 0.592271 | 3.1:+70219966 | MS.gene79217:CDS |
| AATAAATCAACTTCGGCTTG+GGG | 0.592392 | 3.1:+70219973 | MS.gene79217:CDS |
| GAGTTTGTTGATATGCTGGA+TGG | 0.592504 | 3.1:+70217199 | MS.gene79217:CDS |
| GTAACTGTGATCCCCACTGA+CGG | 0.594247 | 3.1:-70219253 | None:intergenic |
| TTGCAGGAGGATTAAGAAGG+TGG | 0.595137 | 3.1:+70218401 | MS.gene79217:intron |
| GGAAGGTATAGATGCACTTG+AGG | 0.595941 | 3.1:+70219586 | MS.gene79217:intron |
| ATCAACACGCTATGATCCAA+CGG | 0.596803 | 3.1:+70218456 | MS.gene79217:CDS |
| GCATCATCGAATTGTCTCGC+AGG | 0.596887 | 3.1:+70216724 | MS.gene79217:CDS |
| TCTCGCAGGTTGCGACATAG+AGG | 0.597101 | 3.1:+70216738 | MS.gene79217:CDS |
| CCACTCCGGATCGATATCCA+TGG | 0.600070 | 3.1:-70220043 | None:intergenic |
| TGAGAATCCATATTTGCCAA+AGG | 0.602556 | 3.1:+70221344 | MS.gene79217:CDS |
| AATCCAGCATGGTCTTTAGA+GGG | 0.604010 | 3.1:-70222053 | None:intergenic |
| AAAATGGTTCTGTCTGGAGA+AGG | 0.606208 | 3.1:+70219704 | MS.gene79217:CDS |
| GGAATAGCTAACCCTCTCAA+AGG | 0.609261 | 3.1:-70218491 | None:intergenic |
| TCCGGACAACAGAACACCAA+AGG | 0.611807 | 3.1:-70219168 | None:intergenic |
| GTACTGCAAAAGCTGTGGAA+TGG | 0.613846 | 3.1:+70221918 | MS.gene79217:CDS |
| GAACAGTTCAGCGATGGTGT+CGG | 0.616755 | 3.1:+70221470 | MS.gene79217:CDS |
| GCACATATTGTACAGGCAGA+AGG | 0.619788 | 3.1:+70221448 | MS.gene79217:intron |
| TCTTTGCAGGAGGATTAAGA+AGG | 0.620740 | 3.1:+70218398 | MS.gene79217:intron |
| CAGTACTGCATGCCACACTA+GGG | 0.621411 | 3.1:-70221901 | None:intergenic |
| CAGAAGGAACAGTTCAGCGA+TGG | 0.621633 | 3.1:+70221464 | MS.gene79217:CDS |
| CAAGCGCGGCACGACCTGAA+GGG | 0.622971 | 3.1:-70221967 | None:intergenic |
| TTTGGTGTTCTGTTGTCCGG+AGG | 0.633191 | 3.1:+70219170 | MS.gene79217:CDS |
| TTGTTGGCAGCCGTCATGTG+CGG | 0.647753 | 3.1:+70216651 | None:intergenic |
| CATAGAGGACCTGATTGGAG+TGG | 0.648591 | 3.1:+70216753 | MS.gene79217:CDS |
| AGTTCCAGGAGGCCCTAGTG+TGG | 0.651099 | 3.1:+70221889 | MS.gene79217:CDS |
| CTGGAATATATATGCCCTGG+AGG | 0.658198 | 3.1:-70218229 | None:intergenic |
| CTGTGGAATGGGATGCAGCA+TGG | 0.665004 | 3.1:+70221930 | MS.gene79217:CDS |
| TAGCAAGACGTTGATGAGCG+AGG | 0.666348 | 3.1:-70216800 | None:intergenic |
| CCATGGATATCGATCCGGAG+TGG | 0.674824 | 3.1:+70220043 | MS.gene79217:CDS |
| TCTATGGCGTTAGGTTAATG+GGG | 0.680597 | 3.1:+70216985 | MS.gene79217:intron |
| GCCCCAACCCAAATAAAGAG+GGG | 0.687236 | 3.1:-70217293 | None:intergenic |
| ACTGACGCTGCCCGTCAGTG+GGG | 0.690660 | 3.1:+70219242 | MS.gene79217:CDS |
| GAACTGTGAAATGAAGTTCG+TGG | 0.696854 | 3.1:-70219462 | None:intergenic |
| GCCAGGTCAACAGTTCCAGG+AGG | 0.705953 | 3.1:+70221878 | MS.gene79217:CDS |
| ATGCAGTACTGCAAAAGCTG+TGG | 0.707096 | 3.1:+70221913 | MS.gene79217:CDS |
| ATTTGCTCTGAGAACCATGG+TGG | 0.708717 | 3.1:-70218430 | None:intergenic |
| GGAATTTGCTCTGAGAACCA+TGG | 0.723639 | 3.1:-70218433 | None:intergenic |
| GAAGGTGGTACAATCCACCA+TGG | 0.728627 | 3.1:+70218416 | MS.gene79217:CDS |
| CTGTGAAATGAAGTTCGTGG+TGG | 0.746248 | 3.1:-70219459 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTACATAAAAATATG+GGG | - | chr3.1:70219839-70219858 | None:intergenic | 10.0% |
| !! | CAATTTATTCAAAAAAAAAA+AGG | - | chr3.1:70217756-70217775 | None:intergenic | 10.0% |
| !! | TGAATTAGATATATCATTTA+TGG | + | chr3.1:70218121-70218140 | MS.gene79217:intron | 15.0% |
| !!! | AATTATGGTATATTACTTTT+CGG | - | chr3.1:70219805-70219824 | None:intergenic | 15.0% |
| !!! | AATTTATTTTACAAGAAAAC+TGG | - | chr3.1:70221142-70221161 | None:intergenic | 15.0% |
| !!! | TTCATGTTCAAATTTAAAAT+TGG | - | chr3.1:70221788-70221807 | None:intergenic | 15.0% |
| !! | AAAAATGTTACAATAAGAAG+CGG | - | chr3.1:70217337-70217356 | None:intergenic | 20.0% |
| !! | ACAGTTTAAAAAAATTACAC+AGG | - | chr3.1:70217504-70217523 | None:intergenic | 20.0% |
| !! | ACATATCTGTATAAACATTA+AGG | + | chr3.1:70217888-70217907 | MS.gene79217:intron | 20.0% |
| !! | ATAAATTCTTTATCCAAGAA+CGG | - | chr3.1:70220015-70220034 | None:intergenic | 20.0% |
| !! | CATATAACTACTATTACTTA+TGG | - | chr3.1:70219353-70219372 | None:intergenic | 20.0% |
| !! | GACATTATATACTTGATAAA+TGG | + | chr3.1:70221591-70221610 | MS.gene79217:intron | 20.0% |
| !! | TAACCAAGAAAAAGTTAAAA+AGG | - | chr3.1:70219099-70219118 | None:intergenic | 20.0% |
| !! | TAGATATATCATTTATGGAA+GGG | + | chr3.1:70218126-70218145 | MS.gene79217:intron | 20.0% |
| !! | TATCAAGTATATAATGTCAA+TGG | - | chr3.1:70221589-70221608 | None:intergenic | 20.0% |
| !! | TATTAGACTATTAGTAAACT+TGG | + | chr3.1:70217720-70217739 | MS.gene79217:intron | 20.0% |
| !! | TTACATCATATGTTTCAATA+TGG | - | chr3.1:70219622-70219641 | None:intergenic | 20.0% |
| !! | TTAGATATATCATTTATGGA+AGG | + | chr3.1:70218125-70218144 | MS.gene79217:intron | 20.0% |
| !! | TTATAGACAAAATAAAAGTG+AGG | - | chr3.1:70218831-70218850 | None:intergenic | 20.0% |
| !! | TTGTAAAATAAATTTGTCTG+TGG | + | chr3.1:70221148-70221167 | MS.gene79217:intron | 20.0% |
| !! | TTTACGTATAATTTCTCAAA+AGG | - | chr3.1:70218936-70218955 | None:intergenic | 20.0% |
| !!! | GGTAATCTAATATTCTATTT+TGG | + | chr3.1:70219553-70219572 | MS.gene79217:intron | 20.0% |
| !!! | TGAAGCTACAAATTTTATAT+AGG | - | chr3.1:70217669-70217688 | None:intergenic | 20.0% |
| !!! | TTCAAATTTAAAATTGGTCA+AGG | - | chr3.1:70221782-70221801 | None:intergenic | 20.0% |
| ! | AAAATGCATCTTGTTGATAT+GGG | - | chr3.1:70220907-70220926 | None:intergenic | 25.0% |
| ! | AAGGTAAAATGGTAGATAAA+GGG | - | chr3.1:70219502-70219521 | None:intergenic | 25.0% |
| ! | AATTTGTCGTTAATTTCATG+AGG | - | chr3.1:70221259-70221278 | None:intergenic | 25.0% |
| ! | ACACCAAAAACTTGAATAAA+CGG | - | chr3.1:70219900-70219919 | None:intergenic | 25.0% |
| ! | AGTAAAATTTAGACAGTAGA+AGG | - | chr3.1:70218335-70218354 | None:intergenic | 25.0% |
| ! | ATATCATTTGCAACAAACTT+AGG | + | chr3.1:70218850-70218869 | MS.gene79217:intron | 25.0% |
| ! | ATATTGAAAGGATAGAGAAA+TGG | + | chr3.1:70221295-70221314 | MS.gene79217:CDS | 25.0% |
| ! | TAAAGAGTTGTCTATACATT+TGG | + | chr3.1:70218069-70218088 | MS.gene79217:intron | 25.0% |
| ! | TACATTTCCTTGAAAAAACT+AGG | - | chr3.1:70217960-70217979 | None:intergenic | 25.0% |
| ! | TACATTTGGTTATGTATTCA+TGG | + | chr3.1:70218083-70218102 | MS.gene79217:intron | 25.0% |
| ! | TATTGAAAGGATAGAGAAAT+GGG | + | chr3.1:70221296-70221315 | MS.gene79217:CDS | 25.0% |
| ! | TCCAGAAAAATCAAATCATT+GGG | + | chr3.1:70219677-70219696 | MS.gene79217:CDS | 25.0% |
| ! | TGTGATTAGTATGAAGAATA+TGG | + | chr3.1:70217172-70217191 | MS.gene79217:intron | 25.0% |
| ! | TTCGAAGTCATACATTTAAT+TGG | + | chr3.1:70217577-70217596 | MS.gene79217:intron | 25.0% |
| ! | TTGTAACTTTACTTCTTTCT+TGG | + | chr3.1:70220075-70220094 | MS.gene79217:intron | 25.0% |
| ! | TTTACAAGAGTAACCATAAT+CGG | - | chr3.1:70218291-70218310 | None:intergenic | 25.0% |
| !! | AACAAGATGCATTTTCTTTT+CGG | + | chr3.1:70220912-70220931 | MS.gene79217:intron | 25.0% |
| !! | AATTTATATCTTTTCCTCCA+GGG | + | chr3.1:70218215-70218234 | MS.gene79217:CDS | 25.0% |
| !! | AGGCATTAATCTTTTACATT+CGG | + | chr3.1:70218020-70218039 | MS.gene79217:intron | 25.0% |
| !! | GCTTTAAATTGCACAATAAA+TGG | - | chr3.1:70217406-70217425 | None:intergenic | 25.0% |
| !!! | ATTATTTTGCAGGATCAATA+TGG | + | chr3.1:70218152-70218171 | MS.gene79217:intron | 25.0% |
| !!! | CATCCTTTTTAACTTTTTCT+TGG | + | chr3.1:70219093-70219112 | MS.gene79217:intron | 25.0% |
| !!! | TTCTATTTTGGCTATATATC+AGG | + | chr3.1:70219565-70219584 | MS.gene79217:intron | 25.0% |
| !!! | TTTTGAGAAGTTATTTCCAA+AGG | + | chr3.1:70221704-70221723 | MS.gene79217:CDS | 25.0% |
| AAAGAGGTAGCAAATTATCT+TGG | + | chr3.1:70219430-70219449 | MS.gene79217:CDS | 30.0% | |
| AAATCTCATCAATTTCGAAC+TGG | + | chr3.1:70217043-70217062 | MS.gene79217:CDS | 30.0% | |
| AAATTCCAATCATGAGCTTA+TGG | - | chr3.1:70218962-70218981 | None:intergenic | 30.0% | |
| AAGACTATACAATTCACCTT+TGG | - | chr3.1:70221723-70221742 | None:intergenic | 30.0% | |
| AAGATGCATCTTGTTGATAT+GGG | - | chr3.1:70220429-70220448 | None:intergenic | 30.0% | |
| AATAAATGGTTCAATTCGAG+TGG | - | chr3.1:70217392-70217411 | None:intergenic | 30.0% | |
| AATCATCTGACAATCACAAT+TGG | - | chr3.1:70217531-70217550 | None:intergenic | 30.0% | |
| AATTCCAATCATGAGCTTAT+GGG | - | chr3.1:70218961-70218980 | None:intergenic | 30.0% | |
| AGATAAAGCCTGATATTGAA+AGG | + | chr3.1:70221283-70221302 | MS.gene79217:intron | 30.0% | |
| AGTAGAAGGAGAAAAACAAA+TGG | - | chr3.1:70218321-70218340 | None:intergenic | 30.0% | |
| AGTATCAGCCAAATATCTAT+TGG | - | chr3.1:70219225-70219244 | None:intergenic | 30.0% | |
| AGTTGATTGATACAAACCTT+TGG | - | chr3.1:70221363-70221382 | None:intergenic | 30.0% | |
| ATAAGCTCATGATTGGAATT+TGG | + | chr3.1:70218961-70218980 | MS.gene79217:intron | 30.0% | |
| ATACAAACCTTTGGCAAATA+TGG | - | chr3.1:70221354-70221373 | None:intergenic | 30.0% | |
| ATCATCTGACAATCACAATT+GGG | - | chr3.1:70217530-70217549 | None:intergenic | 30.0% | |
| ATGAACCATTTCATTTCAAC+AGG | + | chr3.1:70221850-70221869 | MS.gene79217:intron | 30.0% | |
| CAAACGATGAAATAACTCAA+TGG | - | chr3.1:70218525-70218544 | None:intergenic | 30.0% | |
| CAAGGTAAAATGGTAGATAA+AGG | - | chr3.1:70219503-70219522 | None:intergenic | 30.0% | |
| CACAAAATGTTGTCAAATAG+CGG | + | chr3.1:70218659-70218678 | MS.gene79217:intron | 30.0% | |
| CACCAAAAACTTGAATAAAC+GGG | - | chr3.1:70219899-70219918 | None:intergenic | 30.0% | |
| CATATATATTCCAGCAAACA+GGG | + | chr3.1:70218238-70218257 | MS.gene79217:CDS | 30.0% | |
| CTTAGTATCAACTACATCAA+AGG | - | chr3.1:70219058-70219077 | None:intergenic | 30.0% | |
| GAAAATGCATCTTGTTGATA+TGG | - | chr3.1:70220908-70220927 | None:intergenic | 30.0% | |
| GAAGGCTTATAAGAATTGTT+AGG | + | chr3.1:70220398-70220417 | MS.gene79217:intron | 30.0% | |
| GAAGGTTCAGATGAAATATT+TGG | + | chr3.1:70219722-70219741 | MS.gene79217:CDS | 30.0% | |
| GATAGAAGATAAGATACGTA+CGG | - | chr3.1:70216886-70216905 | None:intergenic | 30.0% | |
| GTCCAGAAAAATCAAATCAT+TGG | + | chr3.1:70219676-70219695 | MS.gene79217:CDS | 30.0% | |
| TATATACTTGATAAATGGCC+AGG | + | chr3.1:70221596-70221615 | MS.gene79217:intron | 30.0% | |
| TGAACCATTTCATTTCAACA+GGG | + | chr3.1:70221851-70221870 | MS.gene79217:intron | 30.0% | |
| TGTAAGTGTGTATCTTATCT+TGG | - | chr3.1:70218358-70218377 | None:intergenic | 30.0% | |
| TGTTTATACAGATATGTAGC+AGG | - | chr3.1:70217885-70217904 | None:intergenic | 30.0% | |
| TTCTCTATCCTTTCAATATC+AGG | - | chr3.1:70221294-70221313 | None:intergenic | 30.0% | |
| TTTCTGGACATAAGAAACAT+TGG | - | chr3.1:70219665-70219684 | None:intergenic | 30.0% | |
| ! | AACAAGATGCATCTTCTTTT+CGG | + | chr3.1:70220434-70220453 | MS.gene79217:intron | 30.0% |
| ! | CAATTTATATCTTTTCCTCC+AGG | + | chr3.1:70218214-70218233 | MS.gene79217:CDS | 30.0% |
| ! | TCTTGTAAGTGTTTTCTAGA+AGG | + | chr3.1:70217090-70217109 | MS.gene79217:intron | 30.0% |
| ! | TTGTCACATTTTCTGTTCTA+TGG | + | chr3.1:70216969-70216988 | MS.gene79217:intron | 30.0% |
| !! | TACCCGTTTATTCAAGTTTT+TGG | + | chr3.1:70219894-70219913 | MS.gene79217:intron | 30.0% |
| !! | TCCCAATGATTTGATTTTTC+TGG | - | chr3.1:70219681-70219700 | None:intergenic | 30.0% |
| !! | TTTTTCAGCACATATTGTAC+AGG | + | chr3.1:70221441-70221460 | MS.gene79217:intron | 30.0% |
| !!! | AACATGTCCTAGTTTTTTCA+AGG | + | chr3.1:70217950-70217969 | MS.gene79217:intron | 30.0% |
| !!! | ATAATTTGCTACCTCTTTTG+CGG | - | chr3.1:70219428-70219447 | None:intergenic | 30.0% |
| !!! | ATTATTTTTACCCTGTTTGC+TGG | - | chr3.1:70218251-70218270 | None:intergenic | 30.0% |
| !!! | ATTTTGGCTATATATCAGGA+AGG | + | chr3.1:70219569-70219588 | MS.gene79217:intron | 30.0% |
| !!! | CTCGTTATTTTTTCCGATTA+TGG | + | chr3.1:70218275-70218294 | MS.gene79217:intron | 30.0% |
| !!! | GTTTCTGTCTCAATTTTTTG+TGG | - | chr3.1:70217021-70217040 | None:intergenic | 30.0% |
| AAAATAAAAGAGCCCGACAA+TGG | + | chr3.1:70222028-70222047 | MS.gene79217:CDS | 35.0% | |
| AATAACTCAATGGATGAGAC+AGG | - | chr3.1:70218515-70218534 | None:intergenic | 35.0% | |
| AATTCCCATAAGCTCATGAT+TGG | + | chr3.1:70218954-70218973 | MS.gene79217:intron | 35.0% | |
| ACATTTCCAAAATGCATCTC+TGG | - | chr3.1:70217434-70217453 | None:intergenic | 35.0% | |
| AGAATTTATCAACACTGCCA+TGG | + | chr3.1:70220026-70220045 | MS.gene79217:CDS | 35.0% | |
| AGGTTACCTGTATTTCCATA+AGG | + | chr3.1:70219745-70219764 | MS.gene79217:CDS | 35.0% | |
| ATAAAAATCTCGTCTGCTCA+AGG | - | chr3.1:70219521-70219540 | None:intergenic | 35.0% | |
| ATCCATGTGCTATGCAATTA+AGG | - | chr3.1:70217790-70217809 | None:intergenic | 35.0% | |
| CAAAGACAGCAAAGTTTAAC+AGG | - | chr3.1:70218384-70218403 | None:intergenic | 35.0% | |
| CAAATCATTGGGAGTGAAAA+TGG | + | chr3.1:70219688-70219707 | MS.gene79217:CDS | 35.0% | |
| CAATAAATCAACTTCGGCTT+GGG | + | chr3.1:70219972-70219991 | MS.gene79217:CDS | 35.0% | |
| CAATGTTCAATCAACAATGC+AGG | - | chr3.1:70220160-70220179 | None:intergenic | 35.0% | |
| CAGTTACATACTTTCTGCAT+TGG | + | chr3.1:70219269-70219288 | MS.gene79217:CDS | 35.0% | |
| CTATAGGCTGTCTTATGATT+GGG | + | chr3.1:70220131-70220150 | MS.gene79217:intron | 35.0% | |
| GAAGATGCATCTTGTTGATA+TGG | - | chr3.1:70220430-70220449 | None:intergenic | 35.0% | |
| GAGAGCCAATAAATCAACTT+CGG | + | chr3.1:70219966-70219985 | MS.gene79217:CDS | 35.0% | |
| GAGTGTTATGTCATAACTAG+AGG | + | chr3.1:70218872-70218891 | MS.gene79217:intron | 35.0% | |
| GCATATATATTCCAGCAAAC+AGG | + | chr3.1:70218237-70218256 | MS.gene79217:CDS | 35.0% | |
| GCTGATTACTATGTTCTAGT+TGG | + | chr3.1:70218985-70219004 | MS.gene79217:intron | 35.0% | |
| GGTTCAGATGAAATATTTGG+AGG | + | chr3.1:70219725-70219744 | MS.gene79217:CDS | 35.0% | |
| GTCTTGTCATAGTTGTAAAG+AGG | - | chr3.1:70216852-70216871 | None:intergenic | 35.0% | |
| GTTATACTGTGATATCATGC+AGG | + | chr3.1:70219115-70219134 | MS.gene79217:intron | 35.0% | |
| GTTATTCAGTTCAATGTCAC+AGG | - | chr3.1:70221550-70221569 | None:intergenic | 35.0% | |
| TAATGCCTGTGTATACTAGA+GGG | - | chr3.1:70218008-70218027 | None:intergenic | 35.0% | |
| TCCATGTGCTATGCAATTAA+GGG | - | chr3.1:70217789-70217808 | None:intergenic | 35.0% | |
| TCTCAAAAATTGTCCTGTAG+TGG | - | chr3.1:70221692-70221711 | None:intergenic | 35.0% | |
| TGAGAATCCATATTTGCCAA+AGG | + | chr3.1:70221344-70221363 | MS.gene79217:CDS | 35.0% | |
| TGGTCAAGGTTATGATGAAA+AGG | - | chr3.1:70221768-70221787 | None:intergenic | 35.0% | |
| TTAATGCCTGTGTATACTAG+AGG | - | chr3.1:70218009-70218028 | None:intergenic | 35.0% | |
| TTCTATGGCGTTAGGTTAAT+GGG | + | chr3.1:70216984-70217003 | MS.gene79217:intron | 35.0% | |
| ! | AATAAATCAACTTCGGCTTG+GGG | + | chr3.1:70219973-70219992 | MS.gene79217:CDS | 35.0% |
| ! | ACTTAATTTTCCCCCATTCA+GGG | + | chr3.1:70219385-70219404 | MS.gene79217:intron | 35.0% |
| ! | ATAAACGGGTAAAAGTACAC+AGG | - | chr3.1:70219885-70219904 | None:intergenic | 35.0% |
| ! | ATTTTCTGTTCTATGGCGTT+AGG | + | chr3.1:70216976-70216995 | MS.gene79217:intron | 35.0% |
| ! | GATTTTTATTGCTAGCTCGA+AGG | + | chr3.1:70219532-70219551 | MS.gene79217:intron | 35.0% |
| ! | GCTTGACTTAGAGCAATTTT+GGG | + | chr3.1:70220969-70220988 | MS.gene79217:intron | 35.0% |
| ! | TACAATACCATTTTCCACTC+CGG | - | chr3.1:70220060-70220079 | None:intergenic | 35.0% |
| ! | TACTTTCTGCATTGGTATAG+AGG | + | chr3.1:70219277-70219296 | MS.gene79217:CDS | 35.0% |
| ! | TGCTTGACTTAGAGCAATTT+TGG | + | chr3.1:70220968-70220987 | MS.gene79217:intron | 35.0% |
| ! | TTAAACTTTGCTGTCTTTGC+AGG | + | chr3.1:70218385-70218404 | MS.gene79217:intron | 35.0% |
| ! | TTCCTCTACATTAGAAGCAT+CGG | - | chr3.1:70217932-70217951 | None:intergenic | 35.0% |
| !! | AAAAAACTCGTGTTGGTTTG+TGG | + | chr3.1:70220572-70220591 | MS.gene79217:intron | 35.0% |
| !! | AAAAACTCGTGTTGGTTTGT+GGG | + | chr3.1:70220573-70220592 | MS.gene79217:intron | 35.0% |
| !! | AAGTTGATTTATTGGCTCTC+AGG | - | chr3.1:70219966-70219985 | None:intergenic | 35.0% |
| !! | AATTGGCAGTGATTTGTTGA+CGG | + | chr3.1:70217594-70217613 | MS.gene79217:intron | 35.0% |
| !! | ACAGCTCATTTTAACCATGA+GGG | - | chr3.1:70219314-70219333 | None:intergenic | 35.0% |
| !! | AGAAGAGTTTGTTGATATGC+TGG | + | chr3.1:70217195-70217214 | MS.gene79217:CDS | 35.0% |
| !! | AGTTTGTTGATATGCTGGAT+GGG | + | chr3.1:70217200-70217219 | MS.gene79217:CDS | 35.0% |
| !! | GAGGATGCTTTAAAATTCCA+GGG | - | chr3.1:70218812-70218831 | None:intergenic | 35.0% |
| !! | GTTTTCAGGGTAAACAAAGT+TGG | - | chr3.1:70221646-70221665 | None:intergenic | 35.0% |
| !! | TACAGCTCATTTTAACCATG+AGG | - | chr3.1:70219315-70219334 | None:intergenic | 35.0% |
| !! | TGAGGATGCTTTAAAATTCC+AGG | - | chr3.1:70218813-70218832 | None:intergenic | 35.0% |
| !!! | ACTTAGAGCAATTTTGGGAT+GGG | + | chr3.1:70220974-70220993 | MS.gene79217:intron | 35.0% |
| AAACACTCCTACCACAAAAG+AGG | + | chr3.1:70221662-70221681 | MS.gene79217:CDS | 40.0% | |
| AACACTCCTACCACAAAAGA+GGG | + | chr3.1:70221663-70221682 | MS.gene79217:CDS | 40.0% | |
| AATGCCTGTGTATACTAGAG+GGG | - | chr3.1:70218007-70218026 | None:intergenic | 40.0% | |
| ACCCTTAATTGCATAGCACA+TGG | + | chr3.1:70217785-70217804 | MS.gene79217:intron | 40.0% | |
| AGAACCAGTGCTGTCAATTA+TGG | - | chr3.1:70218746-70218765 | None:intergenic | 40.0% | |
| AGCACCCTGTTGAAATGAAA+TGG | - | chr3.1:70221858-70221877 | None:intergenic | 40.0% | |
| AGGCACTAAGTTGCATTTCA+TGG | - | chr3.1:70218916-70218935 | None:intergenic | 40.0% | |
| ATAACAACACCAAGCAGAAC+TGG | - | chr3.1:70218561-70218580 | None:intergenic | 40.0% | |
| ATCAACACGCTATGATCCAA+CGG | + | chr3.1:70218456-70218475 | MS.gene79217:CDS | 40.0% | |
| ATGATGACTGATGTACCCTT+TGG | + | chr3.1:70219152-70219171 | MS.gene79217:CDS | 40.0% | |
| ATGGTTCATGCATAGTCAAG+TGG | - | chr3.1:70221839-70221858 | None:intergenic | 40.0% | |
| CATGCTGAAAAAACTCGTGT+TGG | + | chr3.1:70220565-70220584 | MS.gene79217:intron | 40.0% | |
| CATTCCATAATTGACAGCAC+TGG | + | chr3.1:70218739-70218758 | MS.gene79217:intron | 40.0% | |
| CCAATAAATCAACTTCGGCT+TGG | + | chr3.1:70219971-70219990 | MS.gene79217:CDS | 40.0% | |
| CGAACTTCATTTCACAGTTC+AGG | + | chr3.1:70219465-70219484 | MS.gene79217:CDS | 40.0% | |
| GAACTGTGAAATGAAGTTCG+TGG | - | chr3.1:70219465-70219484 | None:intergenic | 40.0% | |
| GATACGTACGGTGACAATAA+CGG | - | chr3.1:70216874-70216893 | None:intergenic | 40.0% | |
| GATCATGCTAACGAACAAGT+AGG | + | chr3.1:70221518-70221537 | MS.gene79217:intron | 40.0% | |
| GCTATAGGCTGTCTTATGAT+TGG | + | chr3.1:70220130-70220149 | MS.gene79217:intron | 40.0% | |
| GCTTAACTGTGGAGTTCTTA+TGG | - | chr3.1:70220469-70220488 | None:intergenic | 40.0% | |
| GGGGATAAGCACAAGAATTA+TGG | - | chr3.1:70219820-70219839 | None:intergenic | 40.0% | |
| GTGCTGTCAATTATGGAATG+CGG | - | chr3.1:70218739-70218758 | None:intergenic | 40.0% | |
| GTTCTATGGCGTTAGGTTAA+TGG | + | chr3.1:70216983-70217002 | MS.gene79217:intron | 40.0% | |
| TAAGAGGAACCGAATCACAT+CGG | + | chr3.1:70220326-70220345 | MS.gene79217:intron | 40.0% | |
| TACTGCAAAAGCTGTGGAAT+GGG | + | chr3.1:70221919-70221938 | MS.gene79217:CDS | 40.0% | |
| TCATGCATAGTCAAGTGGTT+TGG | - | chr3.1:70221834-70221853 | None:intergenic | 40.0% | |
| TCGGTTCCTCTTATTAACGT+GGG | - | chr3.1:70220319-70220338 | None:intergenic | 40.0% | |
| TCTATGGCGTTAGGTTAATG+GGG | + | chr3.1:70216985-70217004 | MS.gene79217:intron | 40.0% | |
| TCTTTGCAGGAGGATTAAGA+AGG | + | chr3.1:70218398-70218417 | MS.gene79217:intron | 40.0% | |
| TGATGAAGCTCTTCCTTGTT+AGG | - | chr3.1:70219773-70219792 | None:intergenic | 40.0% | |
| TGCAGTGGCCAATAGATATT+TGG | + | chr3.1:70219214-70219233 | MS.gene79217:CDS | 40.0% | |
| TGCTTGTTCGTATGTCTTGA+AGG | + | chr3.1:70221392-70221411 | MS.gene79217:intron | 40.0% | |
| TGGCATTACCCCTCTTTATT+TGG | + | chr3.1:70217285-70217304 | MS.gene79217:CDS | 40.0% | |
| TTAGAATGTCCAGTTCTGCT+TGG | + | chr3.1:70218549-70218568 | MS.gene79217:intron | 40.0% | |
| TTCGGTTCCTCTTATTAACG+TGG | - | chr3.1:70220320-70220339 | None:intergenic | 40.0% | |
| TTGCTGGAATATATATGCCC+TGG | - | chr3.1:70218235-70218254 | None:intergenic | 40.0% | |
| ! | AAAATGGTTCTGTCTGGAGA+AGG | + | chr3.1:70219704-70219723 | MS.gene79217:CDS | 40.0% |
| ! | AGACTATTTTCAACTCTCCC+TGG | + | chr3.1:70218792-70218811 | MS.gene79217:intron | 40.0% |
| ! | CAGTTGGATTGATGGTTTGA+AGG | + | chr3.1:70221496-70221515 | MS.gene79217:CDS | 40.0% |
| ! | CCAAGCCGAAGTTGATTTAT+TGG | - | chr3.1:70219974-70219993 | None:intergenic | 40.0% |
| ! | CCAATTCCAGAGATGCATTT+TGG | + | chr3.1:70217425-70217444 | MS.gene79217:intron | 40.0% |
| ! | GACTTAATTTTCCCCCATTC+AGG | + | chr3.1:70219384-70219403 | MS.gene79217:intron | 40.0% |
| ! | GGCATTACCCCTCTTTATTT+GGG | + | chr3.1:70217286-70217305 | MS.gene79217:CDS | 40.0% |
| ! | TACCCCTCTTTATTTGGGTT+GGG | + | chr3.1:70217291-70217310 | MS.gene79217:CDS | 40.0% |
| ! | TTACCCCTCTTTATTTGGGT+TGG | + | chr3.1:70217290-70217309 | MS.gene79217:CDS | 40.0% |
| ! | TTCGGCAGTTGCATGATTTT+AGG | + | chr3.1:70218038-70218057 | MS.gene79217:intron | 40.0% |
| !! | AAAACTCGTGTTGGTTTGTG+GGG | + | chr3.1:70220574-70220593 | MS.gene79217:intron | 40.0% |
| !! | AAAAGACTCGTGTTGGTTTG+TGG | + | chr3.1:70221050-70221069 | MS.gene79217:intron | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+GGG | + | chr3.1:70221051-70221070 | MS.gene79217:intron | 40.0% |
| !! | CCAAAATGCATCTCTGGAAT+TGG | - | chr3.1:70217428-70217447 | None:intergenic | 40.0% |
| !! | GACTTAGAGCAATTTTGGGA+TGG | + | chr3.1:70220973-70220992 | MS.gene79217:intron | 40.0% |
| !! | GAGTTTGTTGATATGCTGGA+TGG | + | chr3.1:70217199-70217218 | MS.gene79217:CDS | 40.0% |
| !! | TCATCAACGTCTTGCTATTG+TGG | + | chr3.1:70216806-70216825 | MS.gene79217:CDS | 40.0% |
| !! | TGCTTGGTGTTGTTATGTAG+TGG | + | chr3.1:70218565-70218584 | MS.gene79217:intron | 40.0% |
| !!! | ACTTGGAGCAATTTTGGGAT+GGG | + | chr3.1:70220496-70220515 | MS.gene79217:intron | 40.0% |
| !!! | GCTTGACTTGGAGCAATTTT+GGG | + | chr3.1:70220491-70220510 | MS.gene79217:intron | 40.0% |
| !!! | TGCTTGACTTGGAGCAATTT+TGG | + | chr3.1:70220490-70220509 | MS.gene79217:intron | 40.0% |
| !!! | TTGTGGTAGGAGTGTTTTCA+GGG | - | chr3.1:70221659-70221678 | None:intergenic | 40.0% |
| !!! | TTTGTGGTAGGAGTGTTTTC+AGG | - | chr3.1:70221660-70221679 | None:intergenic | 40.0% |
| AAATCTGGAGAGCCCTGAAT+GGG | - | chr3.1:70219400-70219419 | None:intergenic | 45.0% | |
| AACCTTTCGTATCCAACTGG+CGG | - | chr3.1:70220259-70220278 | None:intergenic | 45.0% | |
| AAGTCAAGCACGCTTAACTG+TGG | - | chr3.1:70220480-70220499 | None:intergenic | 45.0% | |
| ACAGTTAAGCGTGCTTGACT+TGG | + | chr3.1:70220479-70220498 | MS.gene79217:intron | 45.0% | |
| AGATTTGAGAGCCGCAAAAG+AGG | + | chr3.1:70219414-70219433 | MS.gene79217:CDS | 45.0% | |
| AGCATAAGAGGCTGAGCTAT+AGG | + | chr3.1:70220115-70220134 | MS.gene79217:intron | 45.0% | |
| ATCTCGTCATGCAGCATAAG+AGG | + | chr3.1:70220103-70220122 | MS.gene79217:intron | 45.0% | |
| ATGCAGTACTGCAAAAGCTG+TGG | + | chr3.1:70221913-70221932 | MS.gene79217:CDS | 45.0% | |
| ATGCCTGTGTATACTAGAGG+GGG | - | chr3.1:70218006-70218025 | None:intergenic | 45.0% | |
| ATGTTTACCGGGAAACTTCC+CGG | - | chr3.1:70220529-70220548 | None:intergenic | 45.0% | |
| ATTGCTGCTCGTGATGCTAT+TGG | + | chr3.1:70217265-70217284 | MS.gene79217:CDS | 45.0% | |
| CAAAAGAGGGATACCACTAC+AGG | + | chr3.1:70221676-70221695 | MS.gene79217:CDS | 45.0% | |
| CAATGCAAACCACTCCAATC+AGG | - | chr3.1:70216765-70216784 | None:intergenic | 45.0% | |
| CATGCTGAAAAGACTCGTGT+TGG | + | chr3.1:70221043-70221062 | MS.gene79217:intron | 45.0% | |
| CATGTAGTCCCATACCTACA+CGG | - | chr3.1:70220371-70220390 | None:intergenic | 45.0% | |
| CCTCTCATTCCGATGTGATT+CGG | - | chr3.1:70220338-70220357 | None:intergenic | 45.0% | |
| CGAATCACATCGGAATGAGA+GGG | + | chr3.1:70220336-70220355 | MS.gene79217:intron | 45.0% | |
| CGAATTCCGCTACAAAACAG+TGG | - | chr3.1:70218700-70218719 | None:intergenic | 45.0% | |
| CGATTTAACCTCAACCTCGT+TGG | + | chr3.1:70217358-70217377 | MS.gene79217:intron | 45.0% | |
| CGGTTCCTCTTATTAACGTG+GGG | - | chr3.1:70220318-70220337 | None:intergenic | 45.0% | |
| CTCGTCTGCTCAAGGTAAAA+TGG | - | chr3.1:70219513-70219532 | None:intergenic | 45.0% | |
| CTGGAATATATATGCCCTGG+AGG | - | chr3.1:70218232-70218251 | None:intergenic | 45.0% | |
| CTGTGAAATGAAGTTCGTGG+TGG | - | chr3.1:70219462-70219481 | None:intergenic | 45.0% | |
| GATATCGAAAGCCACGTTGT+GGG | - | chr3.1:70220236-70220255 | None:intergenic | 45.0% | |
| GATGACCCCACGTTAATAAG+AGG | + | chr3.1:70220310-70220329 | MS.gene79217:intron | 45.0% | |
| GCACATATTGTACAGGCAGA+AGG | + | chr3.1:70221448-70221467 | MS.gene79217:intron | 45.0% | |
| GGAATAGCTAACCCTCTCAA+AGG | - | chr3.1:70218494-70218513 | None:intergenic | 45.0% | |
| GTACTGCAAAAGCTGTGGAA+TGG | + | chr3.1:70221918-70221937 | MS.gene79217:CDS | 45.0% | |
| GTATGGGACTACATGGTTGA+AGG | + | chr3.1:70220376-70220395 | MS.gene79217:intron | 45.0% | |
| GTCGGATACAGTTGGATTGA+TGG | + | chr3.1:70221488-70221507 | MS.gene79217:CDS | 45.0% | |
| GTTGGATCATAGCGTGTTGA+TGG | - | chr3.1:70218457-70218476 | None:intergenic | 45.0% | |
| TAACATCCCAGACTGCTTTC+AGG | - | chr3.1:70220612-70220631 | None:intergenic | 45.0% | |
| TAGGCGCCTTATGGAAATAC+AGG | - | chr3.1:70219754-70219773 | None:intergenic | 45.0% | |
| TATCGATCCGGAGTGGAAAA+TGG | + | chr3.1:70220050-70220069 | MS.gene79217:CDS | 45.0% | |
| TCCAAAAATCTGGACCCTTC+AGG | + | chr3.1:70221953-70221972 | MS.gene79217:CDS | 45.0% | |
| TGCAGCATGGTCCAAAAATC+TGG | + | chr3.1:70221943-70221962 | MS.gene79217:CDS | 45.0% | |
| TGCCGATGCTTCTAATGTAG+AGG | + | chr3.1:70217927-70217946 | MS.gene79217:intron | 45.0% | |
| TGCGGAATCTTAGCAGTGTT+GGG | + | chr3.1:70216669-70216688 | MS.gene79217:CDS | 45.0% | |
| TGTTCATGCAGCTGCATACA+AGG | + | chr3.1:70221991-70222010 | MS.gene79217:CDS | 45.0% | |
| TTAACGTGGGGTCATCCTTA+CGG | - | chr3.1:70220306-70220325 | None:intergenic | 45.0% | |
| TTGCAGGAGGATTAAGAAGG+TGG | + | chr3.1:70218401-70218420 | MS.gene79217:intron | 45.0% | |
| ! | AACTTTGCTGTCTTTGCAGG+AGG | + | chr3.1:70218388-70218407 | MS.gene79217:intron | 45.0% |
| ! | AATCTTAGCAGTGTTGGGTG+TGG | + | chr3.1:70216674-70216693 | MS.gene79217:CDS | 45.0% |
| ! | ACCTGAAGGGTCCAGATTTT+TGG | - | chr3.1:70221957-70221976 | None:intergenic | 45.0% |
| ! | AGAGGTTGATCTCCAGAAGT+AGG | - | chr3.1:70216834-70216853 | None:intergenic | 45.0% |
| ! | GAGGTTGATCTCCAGAAGTA+GGG | - | chr3.1:70216833-70216852 | None:intergenic | 45.0% |
| ! | GCAGTCTGGGATGTTACAAA+TGG | + | chr3.1:70220616-70220635 | MS.gene79217:intron | 45.0% |
| ! | GCTATGCCACTGTTTTGTAG+CGG | + | chr3.1:70218691-70218710 | MS.gene79217:intron | 45.0% |
| ! | GGAAGGTATAGATGCACTTG+AGG | + | chr3.1:70219586-70219605 | MS.gene79217:intron | 45.0% |
| ! | GGAGTGAAAATGGTTCTGTC+TGG | + | chr3.1:70219698-70219717 | MS.gene79217:CDS | 45.0% |
| ! | GTAGTGGTATCCCTCTTTTG+TGG | - | chr3.1:70221676-70221695 | None:intergenic | 45.0% |
| ! | TCTGCATTGGTATAGAGGTC+TGG | + | chr3.1:70219282-70219301 | MS.gene79217:intron | 45.0% |
| ! | TCTTTTGCGGCTCTCAAATC+TGG | - | chr3.1:70219415-70219434 | None:intergenic | 45.0% |
| ! | TGGTATCCCTCTTTTGTGGT+AGG | - | chr3.1:70221672-70221691 | None:intergenic | 45.0% |
| ! | TTTCCATAAGGCGCCTAACA+AGG | + | chr3.1:70219757-70219776 | MS.gene79217:CDS | 45.0% |
| !! | AAGACTCGTGTTGGTTTGTG+GGG | + | chr3.1:70221052-70221071 | MS.gene79217:intron | 45.0% |
| !! | ACCCCTCTTTATTTGGGTTG+GGG | + | chr3.1:70217292-70217311 | MS.gene79217:CDS | 45.0% |
| !! | ATTTGCTCTGAGAACCATGG+TGG | - | chr3.1:70218433-70218452 | None:intergenic | 45.0% |
| !! | GACTTGGAGCAATTTTGGGA+TGG | + | chr3.1:70220495-70220514 | MS.gene79217:intron | 45.0% |
| !! | GGAAGGGCTGATTATTTTGC+AGG | + | chr3.1:70218142-70218161 | MS.gene79217:intron | 45.0% |
| !! | GGAATTTGCTCTGAGAACCA+TGG | - | chr3.1:70218436-70218455 | None:intergenic | 45.0% |
| !! | TGTTGGTTTGTGGGGTTAGT+CGG | + | chr3.1:70220582-70220601 | MS.gene79217:intron | 45.0% |
| !! | TGTTGGTTTGTGGGGTTAGT+TGG | + | chr3.1:70220582-70220601 | MS.gene79217:intron | 45.0% |
| !! | AATTTATTCAAAAAAAAAAA+GGG | - | chr3.1:70217755-70217774 | None:intergenic | 5.0% |
| !! | ATAATAATTACATAAAAATA+TGG | - | chr3.1:70219841-70219860 | None:intergenic | 5.0% |
| !! | TAATAATTACATAAAAATAT+GGG | - | chr3.1:70219840-70219859 | None:intergenic | 5.0% |
| AATCTGGAGAGCCCTGAATG+GGG | - | chr3.1:70219399-70219418 | None:intergenic | 50.0% | |
| ACATCGGAATGAGAGGGATC+CGG | + | chr3.1:70220342-70220361 | MS.gene79217:intron | 50.0% | |
| ACCTTTCGTATCCAACTGGC+AGG | - | chr3.1:70220258-70220277 | None:intergenic | 50.0% | |
| ACCTTTCGTATCCAACTGGC+GGG | - | chr3.1:70220258-70220277 | None:intergenic | 50.0% | |
| AGGTCTGGACTATTCCCTCA+TGG | + | chr3.1:70219297-70219316 | MS.gene79217:intron | 50.0% | |
| ATGCTTACCGGGAAACTTCC+CGG | - | chr3.1:70221007-70221026 | None:intergenic | 50.0% | |
| CAAATCTGGAGAGCCCTGAA+TGG | - | chr3.1:70219401-70219420 | None:intergenic | 50.0% | |
| CAACTGTAACACCCACAACG+TGG | + | chr3.1:70220222-70220241 | MS.gene79217:intron | 50.0% | |
| CACTGCCATGGATATCGATC+CGG | + | chr3.1:70220038-70220057 | MS.gene79217:CDS | 50.0% | |
| CAGAAGGAACAGTTCAGCGA+TGG | + | chr3.1:70221464-70221483 | MS.gene79217:CDS | 50.0% | |
| CAGTACTGCATGCCACACTA+GGG | - | chr3.1:70221904-70221923 | None:intergenic | 50.0% | |
| CATAGAGGACCTGATTGGAG+TGG | + | chr3.1:70216753-70216772 | MS.gene79217:CDS | 50.0% | |
| CCGAATCACATCGGAATGAG+AGG | + | chr3.1:70220335-70220354 | MS.gene79217:intron | 50.0% | |
| CCGGACAACAGAACACCAAA+GGG | - | chr3.1:70219170-70219189 | None:intergenic | 50.0% | |
| CGTGTAGGTATGGGACTACA+TGG | + | chr3.1:70220369-70220388 | MS.gene79217:intron | 50.0% | |
| CTGTGATATCATGCAGGCTG+TGG | + | chr3.1:70219121-70219140 | MS.gene79217:intron | 50.0% | |
| CTTAGACACCAACGAGGTTG+AGG | - | chr3.1:70217369-70217388 | None:intergenic | 50.0% | |
| CTTCCTTGTTAGGCGCCTTA+TGG | - | chr3.1:70219763-70219782 | None:intergenic | 50.0% | |
| GAACAGTTCAGCGATGGTGT+CGG | + | chr3.1:70221470-70221489 | MS.gene79217:CDS | 50.0% | |
| GAAGGTGGTACAATCCACCA+TGG | + | chr3.1:70218416-70218435 | MS.gene79217:CDS | 50.0% | |
| GCATCATCGAATTGTCTCGC+AGG | + | chr3.1:70216724-70216743 | MS.gene79217:CDS | 50.0% | |
| GCCCCAACCCAAATAAAGAG+GGG | - | chr3.1:70217296-70217315 | None:intergenic | 50.0% | |
| GCTATTGTGGACCCTACTTC+TGG | + | chr3.1:70216819-70216838 | MS.gene79217:CDS | 50.0% | |
| GCTTTCGATATCCTGCCAGT+TGG | + | chr3.1:70220244-70220263 | MS.gene79217:intron | 50.0% | |
| GGATATCGAAAGCCACGTTG+TGG | - | chr3.1:70220237-70220256 | None:intergenic | 50.0% | |
| GGCAATCCTGAAAGCAGTCT+GGG | + | chr3.1:70220603-70220622 | MS.gene79217:intron | 50.0% | |
| GGCCCCAACCCAAATAAAGA+GGG | - | chr3.1:70217297-70217316 | None:intergenic | 50.0% | |
| GGGAACCTTTCGTATCCAAC+TGG | - | chr3.1:70220262-70220281 | None:intergenic | 50.0% | |
| GGGACTACATGGTTGAAGGA+AGG | + | chr3.1:70220380-70220399 | MS.gene79217:intron | 50.0% | |
| GTAACTGTGATCCCCACTGA+CGG | - | chr3.1:70219256-70219275 | None:intergenic | 50.0% | |
| GTCCTCACTCGCATGTTTAC+CGG | - | chr3.1:70220541-70220560 | None:intergenic | 50.0% | |
| GTGCGGAATCTTAGCAGTGT+TGG | + | chr3.1:70216668-70216687 | MS.gene79217:CDS | 50.0% | |
| TAACTGTGATCCCCACTGAC+GGG | - | chr3.1:70219255-70219274 | None:intergenic | 50.0% | |
| TCCGGACAACAGAACACCAA+AGG | - | chr3.1:70219171-70219190 | None:intergenic | 50.0% | |
| TCCTCACTCGCATGTTTACC+GGG | - | chr3.1:70220540-70220559 | None:intergenic | 50.0% | |
| TCCTGCCAGTTGGATACGAA+AGG | + | chr3.1:70220254-70220273 | MS.gene79217:intron | 50.0% | |
| TGCCTGTGTATACTAGAGGG+GGG | - | chr3.1:70218005-70218024 | None:intergenic | 50.0% | |
| TGCGACATAGAGGACCTGAT+TGG | + | chr3.1:70216748-70216767 | MS.gene79217:CDS | 50.0% | |
| TGGCAATCCTGAAAGCAGTC+TGG | + | chr3.1:70221080-70221099 | MS.gene79217:intron | 50.0% | |
| TGGCCCCAACCCAAATAAAG+AGG | - | chr3.1:70217298-70217317 | None:intergenic | 50.0% | |
| ! | TAGCAAGACGTTGATGAGCG+AGG | - | chr3.1:70216803-70216822 | None:intergenic | 50.0% |
| ! | TGATCCAACGGTTTTGCGTG+AGG | + | chr3.1:70218468-70218487 | MS.gene79217:CDS | 50.0% |
| ! | TTTGCGTGAGGCCTTTGAGA+GGG | + | chr3.1:70218480-70218499 | MS.gene79217:CDS | 50.0% |
| ! | TTTTGCGTGAGGCCTTTGAG+AGG | + | chr3.1:70218479-70218498 | MS.gene79217:CDS | 50.0% |
| !! | AACTTCGGCTTGGGGTATAG+AGG | + | chr3.1:70219981-70220000 | MS.gene79217:CDS | 50.0% |
| !! | CCCTTTGGTGTTCTGTTGTC+CGG | + | chr3.1:70219167-70219186 | MS.gene79217:CDS | 50.0% |
| !! | TATTTGGGTTGGGGCCATGA+TGG | + | chr3.1:70217301-70217320 | MS.gene79217:CDS | 50.0% |
| !! | TTTGGTGTTCTGTTGTCCGG+AGG | + | chr3.1:70219170-70219189 | MS.gene79217:CDS | 50.0% |
| !!! | TTTTGGGATGGGTGACCTAC+CGG | + | chr3.1:70220507-70220526 | MS.gene79217:intron | 50.0% |
| AAGGCCTCACGCAAAACCGT+TGG | - | chr3.1:70218475-70218494 | None:intergenic | 55.0% | |
| AAGGTTCCCGCCAGTTGGAA+CGG | + | chr3.1:70220273-70220292 | MS.gene79217:intron | 55.0% | |
| AAGTGACGAGTCCAGTCCTC+CGG | - | chr3.1:70219189-70219208 | None:intergenic | 55.0% | |
| AGCTGCATGAACACCAAGCG+CGG | - | chr3.1:70221984-70222003 | None:intergenic | 55.0% | |
| ATAGTGCCCGTTCCAACTGG+CGG | - | chr3.1:70220283-70220302 | None:intergenic | 55.0% | |
| ATCTGGAGAGCCCTGAATGG+GGG | - | chr3.1:70219398-70219417 | None:intergenic | 55.0% | |
| CCACTCCGGATCGATATCCA+TGG | - | chr3.1:70220046-70220065 | None:intergenic | 55.0% | |
| CCATGGATATCGATCCGGAG+TGG | + | chr3.1:70220043-70220062 | MS.gene79217:CDS | 55.0% | |
| CGGCAATCCTGAAAGCAGTC+TGG | + | chr3.1:70220602-70220621 | MS.gene79217:intron | 55.0% | |
| CTGTGGAATGGGATGCAGCA+TGG | + | chr3.1:70221930-70221949 | MS.gene79217:CDS | 55.0% | |
| GAGTGGCTTAGACACCAACG+AGG | - | chr3.1:70217375-70217394 | None:intergenic | 55.0% | |
| GCAGTACTGCATGCCACACT+AGG | - | chr3.1:70221905-70221924 | None:intergenic | 55.0% | |
| GCCTGTGTATACTAGAGGGG+GGG | - | chr3.1:70218004-70218023 | None:intergenic | 55.0% | |
| GCTTTCGATATCCCGCCAGT+TGG | + | chr3.1:70220722-70220741 | MS.gene79217:intron | 55.0% | |
| GGCATGTAACACCCACAACG+TGG | + | chr3.1:70220700-70220719 | MS.gene79217:intron | 55.0% | |
| GTCCTCACTCGCATGCTTAC+CGG | - | chr3.1:70221019-70221038 | None:intergenic | 55.0% | |
| GTTGGGGCCATGATGGTATG+TGG | + | chr3.1:70217308-70217327 | MS.gene79217:intron | 55.0% | |
| TACGAAAGGTTCCCGCCAGT+TGG | + | chr3.1:70220268-70220287 | MS.gene79217:intron | 55.0% | |
| TCAGCATTGCGTCTGTGACC+TGG | - | chr3.1:70221617-70221636 | None:intergenic | 55.0% | |
| TCCCCCCCTCTAGTATACAC+AGG | + | chr3.1:70218000-70218019 | MS.gene79217:intron | 55.0% | |
| TCCCGCCAGTTGGATACGAA+AGG | + | chr3.1:70220732-70220751 | MS.gene79217:intron | 55.0% | |
| TCCCGGTAAACATGCGAGTG+AGG | + | chr3.1:70220536-70220555 | MS.gene79217:intron | 55.0% | |
| TCCTCACTCGCATGCTTACC+GGG | - | chr3.1:70221018-70221037 | None:intergenic | 55.0% | |
| TCTCGCAGGTTGCGACATAG+AGG | + | chr3.1:70216738-70216757 | MS.gene79217:CDS | 55.0% | |
| TGACCTACCGGGAAGTTTCC+CGG | + | chr3.1:70220519-70220538 | MS.gene79217:intron | 55.0% | |
| TGGAACGGGCACTATCCGTA+AGG | + | chr3.1:70220288-70220307 | MS.gene79217:intron | 55.0% | |
| TGTTCTGTTGTCCGGAGGAC+TGG | + | chr3.1:70219175-70219194 | MS.gene79217:CDS | 55.0% | |
| TTACCGGGAAACTTCCCGGT+AGG | - | chr3.1:70220525-70220544 | None:intergenic | 55.0% | |
| TTCGATGATGCGAGCGCGTT+TGG | - | chr3.1:70216715-70216734 | None:intergenic | 55.0% | |
| ! | AGAGGCACGTGTACCGTTCT+TGG | + | chr3.1:70219999-70220018 | MS.gene79217:CDS | 55.0% |
| ! | CTCGTCACTTGTTGCTGCAG+TGG | + | chr3.1:70219199-70219218 | MS.gene79217:CDS | 55.0% |
| ! | GCGATGGTGTCGGATACAGT+TGG | + | chr3.1:70221480-70221499 | MS.gene79217:CDS | 55.0% |
| ! | TTTGGGATGGGTGACCTACC+GGG | + | chr3.1:70220508-70220527 | MS.gene79217:intron | 55.0% |
| !! | CATTTCAACAGGGTGCTGCC+AGG | + | chr3.1:70221861-70221880 | MS.gene79217:intron | 55.0% |
| ACAAACCAGGCGGAAGCTGG+TGG | + | chr3.1:70220678-70220697 | MS.gene79217:intron | 60.0% | |
| AGGTTCCCGCCAGTTGGAAC+GGG | + | chr3.1:70220274-70220293 | MS.gene79217:intron | 60.0% | |
| AGTTCCAGGAGGCCCTAGTG+TGG | + | chr3.1:70221889-70221908 | MS.gene79217:CDS | 60.0% | |
| ATACTGACGCTGCCCGTCAG+TGG | + | chr3.1:70219240-70219259 | MS.gene79217:CDS | 60.0% | |
| ATCCGGAGGCCGTGTAGGTA+TGG | + | chr3.1:70220359-70220378 | MS.gene79217:intron | 60.0% | |
| CAAACCAGGCGGAAGCTGGT+GGG | + | chr3.1:70220679-70220698 | MS.gene79217:intron | 60.0% | |
| CGGATAGTGCCCGTTCCAAC+TGG | - | chr3.1:70220286-70220305 | None:intergenic | 60.0% | |
| GCCAGGTCAACAGTTCCAGG+AGG | + | chr3.1:70221878-70221897 | MS.gene79217:CDS | 60.0% | |
| GCCTCCTGGAACTGTTGACC+TGG | - | chr3.1:70221882-70221901 | None:intergenic | 60.0% | |
| GCGGCAGCCACATACCATCA+TGG | - | chr3.1:70217318-70217337 | None:intergenic | 60.0% | |
| GCTGCCAGGTCAACAGTTCC+AGG | + | chr3.1:70221875-70221894 | MS.gene79217:CDS | 60.0% | |
| TACTGACGCTGCCCGTCAGT+GGG | + | chr3.1:70219241-70219260 | MS.gene79217:CDS | 60.0% | |
| TAGTGCCCGTTCCAACTGGC+GGG | - | chr3.1:70220282-70220301 | None:intergenic | 60.0% | |
| TCCCATACCTACACGGCCTC+CGG | - | chr3.1:70220364-70220383 | None:intergenic | 60.0% | |
| TCCCGGTAAGCATGCGAGTG+AGG | + | chr3.1:70221014-70221033 | MS.gene79217:intron | 60.0% | |
| TCCGGAGGCCGTGTAGGTAT+GGG | + | chr3.1:70220360-70220379 | MS.gene79217:intron | 60.0% | |
| TCGGAATGAGAGGGATCCGG+AGG | + | chr3.1:70220345-70220364 | MS.gene79217:intron | 60.0% | |
| ! | TGGTTCGGGGACAAACCAGG+CGG | + | chr3.1:70220668-70220687 | MS.gene79217:intron | 60.0% |
| ACTGACGCTGCCCGTCAGTG+GGG | + | chr3.1:70219242-70219261 | MS.gene79217:CDS | 65.0% | |
| CAAGCGCGGCACGACCTGAA+GGG | - | chr3.1:70221970-70221989 | None:intergenic | 65.0% | |
| CATGCCACACTAGGGCCTCC+TGG | - | chr3.1:70221896-70221915 | None:intergenic | 65.0% | |
| GGGACAAACCAGGCGGAAGC+TGG | + | chr3.1:70220675-70220694 | MS.gene79217:intron | 65.0% | |
| CATGCCCACCAGCTTCCGCC+TGG | - | chr3.1:70220686-70220705 | None:intergenic | 70.0% | |
| CCAAGCGCGGCACGACCTGA+AGG | - | chr3.1:70221971-70221990 | None:intergenic | 70.0% | |
| CCTTCAGGTCGTGCCGCGCT+TGG | + | chr3.1:70221968-70221987 | MS.gene79217:CDS | 70.0% | |
| GAGGGATCCGGAGGCCGTGT+AGG | + | chr3.1:70220354-70220373 | MS.gene79217:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 70216666 | 70222060 | 70216666 | ID=MS.gene79217 |
| chr3.1 | mRNA | 70216666 | 70222060 | 70216666 | ID=MS.gene79217.t1;Parent=MS.gene79217 |
| chr3.1 | exon | 70216666 | 70216884 | 70216666 | ID=MS.gene79217.t1.exon1;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70216666 | 70216884 | 70216666 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70216998 | 70217093 | 70216998 | ID=MS.gene79217.t1.exon2;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70216998 | 70217093 | 70216998 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70217181 | 70217322 | 70217181 | ID=MS.gene79217.t1.exon3;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70217181 | 70217322 | 70217181 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70218164 | 70218259 | 70218164 | ID=MS.gene79217.t1.exon4;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70218164 | 70218259 | 70218164 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70218407 | 70218501 | 70218407 | ID=MS.gene79217.t1.exon5;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70218407 | 70218501 | 70218407 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70219137 | 70219298 | 70219137 | ID=MS.gene79217.t1.exon6;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70219137 | 70219298 | 70219137 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70219406 | 70219486 | 70219406 | ID=MS.gene79217.t1.exon7;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70219406 | 70219486 | 70219406 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70219587 | 70219808 | 70219587 | ID=MS.gene79217.t1.exon8;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70219587 | 70219808 | 70219587 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70219937 | 70220071 | 70219937 | ID=MS.gene79217.t1.exon9;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70219937 | 70220071 | 70219937 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70221285 | 70221365 | 70221285 | ID=MS.gene79217.t1.exon10;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70221285 | 70221365 | 70221285 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70221449 | 70221535 | 70221449 | ID=MS.gene79217.t1.exon11;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70221449 | 70221535 | 70221449 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70221618 | 70221725 | 70221618 | ID=MS.gene79217.t1.exon12;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70221618 | 70221725 | 70221618 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| chr3.1 | exon | 70221872 | 70222060 | 70221872 | ID=MS.gene79217.t1.exon13;Parent=MS.gene79217.t1 |
| chr3.1 | CDS | 70221872 | 70222060 | 70221872 | ID=cds.MS.gene79217.t1;Parent=MS.gene79217.t1 |
| Gene Sequence |
| Protein sequence |
