Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045117.t1 | XP_003601953.1 | 98.6 | 570 | 8 | 0 | 1 | 570 | 1 | 570 | 0.00E+00 | 1181 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045117.t1 | Q9LV77 | 85.1 | 556 | 83 | 0 | 1 | 556 | 1 | 556 | 3.8e-299 | 1028.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045117.t1 | G7J3R9 | 98.6 | 570 | 8 | 0 | 1 | 570 | 1 | 570 | 0.0e+00 | 1181.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32653 | MS.gene045117 | PPI |
| MS.gene014853 | MS.gene045117 | PPI |
| MS.gene045117 | MS.gene03964 | PPI |
| MS.gene50183 | MS.gene045117 | PPI |
| MS.gene57014 | MS.gene045117 | PPI |
| MS.gene75475 | MS.gene045117 | PPI |
| MS.gene045117 | MS.gene072874 | PPI |
| MS.gene045117 | MS.gene80238 | PPI |
| MS.gene064542 | MS.gene045117 | PPI |
| MS.gene53989 | MS.gene045117 | PPI |
| MS.gene045117 | MS.gene048489 | PPI |
| MS.gene045117 | MS.gene008693 | PPI |
| MS.gene017760 | MS.gene045117 | PPI |
| MS.gene045117 | MS.gene73119 | PPI |
| MS.gene38765 | MS.gene045117 | PPI |
| MS.gene014008 | MS.gene045117 | PPI |
| MS.gene79217 | MS.gene045117 | PPI |
| MS.gene05726 | MS.gene045117 | PPI |
| MS.gene052207 | MS.gene045117 | PPI |
| MS.gene009829 | MS.gene045117 | PPI |
| MS.gene035805 | MS.gene045117 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045117.t1 | MTR_3g087220 | 98.596 | 570 | 8 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1182 |
| MS.gene045117.t1 | MTR_5g071360 | 77.878 | 556 | 123 | 0 | 1 | 556 | 1 | 556 | 0.0 | 938 |
| MS.gene045117.t1 | MTR_3g464580 | 74.517 | 569 | 142 | 2 | 1 | 566 | 1 | 569 | 0.0 | 913 |
| MS.gene045117.t1 | MTR_5g071360 | 77.255 | 510 | 116 | 0 | 1 | 510 | 1 | 510 | 0.0 | 855 |
| MS.gene045117.t1 | MTR_3g464580 | 75.639 | 509 | 123 | 1 | 1 | 508 | 1 | 509 | 0.0 | 833 |
| MS.gene045117.t1 | MTR_3g464580 | 76.562 | 448 | 103 | 2 | 1 | 447 | 1 | 447 | 0.0 | 736 |
| MS.gene045117.t1 | MTR_5g069310 | 69.298 | 114 | 35 | 0 | 443 | 556 | 2 | 115 | 1.67e-51 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045117.t1 | AT5G10240 | 85.199 | 554 | 82 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1021 |
| MS.gene045117.t1 | AT5G65010 | 85.455 | 550 | 80 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1018 |
| MS.gene045117.t1 | AT5G65010 | 85.299 | 551 | 80 | 1 | 1 | 550 | 1 | 551 | 0.0 | 1015 |
| MS.gene045117.t1 | AT5G10240 | 84.657 | 554 | 84 | 1 | 1 | 554 | 1 | 553 | 0.0 | 1010 |
| MS.gene045117.t1 | AT3G47340 | 75.221 | 565 | 139 | 1 | 1 | 565 | 1 | 564 | 0.0 | 934 |
| MS.gene045117.t1 | AT3G47340 | 76.378 | 508 | 120 | 0 | 1 | 508 | 1 | 508 | 0.0 | 856 |
| MS.gene045117.t1 | AT3G47340 | 77.218 | 417 | 95 | 0 | 1 | 417 | 1 | 417 | 0.0 | 714 |
| MS.gene045117.t1 | AT3G47340 | 77.483 | 302 | 68 | 0 | 116 | 417 | 1 | 302 | 0.0 | 520 |
Find 135 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCATTACCCCTCTTTATT+TGG | 0.114873 | 3.4:+81034041 | MS.gene045117:CDS |
| CCAAGCCGAAGTTGATTTAT+TGG | 0.156555 | 3.4:-81036730 | None:intergenic |
| ATACAAACCTTTGGCAAATA+TGG | 0.166150 | 3.4:-81037219 | None:intergenic |
| TTCTCTATCCTTTCAATATC+AGG | 0.209485 | 3.4:-81037159 | None:intergenic |
| GAAGGTTCAGATGAAATATT+TGG | 0.221785 | 3.4:+81036481 | MS.gene045117:CDS |
| CAAATCATTGGGAGTGAAAA+TGG | 0.232355 | 3.4:+81036447 | MS.gene045117:CDS |
| TACCCCTCTTTATTTGGGTT+GGG | 0.252968 | 3.4:+81034047 | MS.gene045117:CDS |
| GGCATTACCCCTCTTTATTT+GGG | 0.262355 | 3.4:+81034042 | MS.gene045117:CDS |
| CTTCCTTGTTAGGCGCCTTA+TGG | 0.267987 | 3.4:-81036519 | None:intergenic |
| TTCTATGGCGTTAGGTTAAT+GGG | 0.271922 | 3.4:+81033740 | MS.gene045117:intron |
| GTTCTATGGCGTTAGGTTAA+TGG | 0.276233 | 3.4:+81033739 | MS.gene045117:intron |
| GCTATTGTGGACCCTACTTC+TGG | 0.276442 | 3.4:+81033575 | MS.gene045117:CDS |
| TGATGAAGCTCTTCCTTGTT+AGG | 0.297491 | 3.4:-81036529 | None:intergenic |
| TGCAGTGGCCAATAGATATT+TGG | 0.298358 | 3.4:+81035973 | MS.gene045117:CDS |
| TTCGATGATGCGAGCGCGTT+TGG | 0.303802 | 3.4:-81033468 | None:intergenic |
| ATTGCTGCTCGTGATGCTAT+TGG | 0.320060 | 3.4:+81034021 | MS.gene045117:CDS |
| TGTGATTAGTATGAAGAATA+TGG | 0.322666 | 3.4:+81033928 | MS.gene045117:intron |
| CAATAAATCAACTTCGGCTT+GGG | 0.326748 | 3.4:+81036731 | MS.gene045117:CDS |
| TATCGATCCGGAGTGGAAAA+TGG | 0.332343 | 3.4:+81036809 | MS.gene045117:CDS |
| CGAACTTCATTTCACAGTTC+AGG | 0.340310 | 3.4:+81036224 | MS.gene045117:CDS |
| TTACCCCTCTTTATTTGGGT+TGG | 0.360345 | 3.4:+81034046 | MS.gene045117:CDS |
| GCATATATATTCCAGCAAAC+AGG | 0.371801 | 3.4:+81034996 | MS.gene045117:CDS |
| AGAGGCACGTGTACCGTTCT+TGG | 0.383283 | 3.4:+81036758 | MS.gene045117:CDS |
| ACCCCTCTTTATTTGGGTTG+GGG | 0.385041 | 3.4:+81034048 | MS.gene045117:CDS |
| TGTTCTGTTGTCCGGAGGAC+TGG | 0.389790 | 3.4:+81035934 | MS.gene045117:CDS |
| CCCTTTGGTGTTCTGTTGTC+CGG | 0.394985 | 3.4:+81035926 | MS.gene045117:CDS |
| TTACATCATATGTTTCAATA+TGG | 0.407697 | 3.4:-81036378 | None:intergenic |
| CCTTCAGGTCGTGCCGCGCT+TGG | 0.420882 | 3.4:+81037836 | MS.gene045117:CDS |
| GCTGCCAGGTCAACAGTTCC+AGG | 0.421132 | 3.4:+81037743 | MS.gene045117:CDS |
| TACTTTCTGCATTGGTATAG+AGG | 0.424643 | 3.4:+81036036 | MS.gene045117:CDS |
| CAGTTGGATTGATGGTTTGA+AGG | 0.424749 | 3.4:+81037364 | MS.gene045117:CDS |
| GTCGGATACAGTTGGATTGA+TGG | 0.430598 | 3.4:+81037356 | MS.gene045117:CDS |
| GTTGGATCATAGCGTGTTGA+TGG | 0.432444 | 3.4:-81035213 | None:intergenic |
| AGTATCAGCCAAATATCTAT+TGG | 0.434666 | 3.4:-81035981 | None:intergenic |
| TCTTTAGAGGGATCCATTGT+CGG | 0.443265 | 3.4:-81037909 | None:intergenic |
| TATTGAAAGGATAGAGAAAT+GGG | 0.451135 | 3.4:+81037164 | MS.gene045117:CDS |
| CATGCCACACTAGGGCCTCC+TGG | 0.457389 | 3.4:-81037761 | None:intergenic |
| ATATTGAAAGGATAGAGAAA+TGG | 0.459884 | 3.4:+81037163 | MS.gene045117:CDS |
| TATTTGGGTTGGGGCCATGA+TGG | 0.462409 | 3.4:+81034057 | MS.gene045117:CDS |
| TACTGCAAAAGCTGTGGAAT+GGG | 0.464980 | 3.4:+81037787 | MS.gene045117:CDS |
| AGGTTACCTGTATTTCCATA+AGG | 0.465018 | 3.4:+81036504 | MS.gene045117:CDS |
| AAATCTCATCAATTTCGAAC+TGG | 0.470336 | 3.4:+81033799 | MS.gene045117:CDS |
| GCAGTACTGCATGCCACACT+AGG | 0.471392 | 3.4:-81037770 | None:intergenic |
| TAGGCGCCTTATGGAAATAC+AGG | 0.475864 | 3.4:-81036510 | None:intergenic |
| AGAAGAGTTTGTTGATATGC+TGG | 0.476984 | 3.4:+81033951 | MS.gene045117:CDS |
| AAAGAGGTAGCAAATTATCT+TGG | 0.479356 | 3.4:+81036189 | MS.gene045117:CDS |
| AAGTTGATTTATTGGCTCTC+AGG | 0.481018 | 3.4:-81036722 | None:intergenic |
| CTCGTCACTTGTTGCTGCAG+TGG | 0.482865 | 3.4:+81035958 | MS.gene045117:CDS |
| CAATGCAAACCACTCCAATC+AGG | 0.489191 | 3.4:-81033518 | None:intergenic |
| TACTGACACTGCCCGTCAGT+GGG | 0.497561 | 3.4:+81036000 | MS.gene045117:CDS |
| CTTTAGAGGGATCCATTGTC+GGG | 0.500502 | 3.4:-81037908 | None:intergenic |
| AGAGGTTGATCTCCAGAAGT+AGG | 0.500746 | 3.4:-81033587 | None:intergenic |
| GATACGTACGGTGACAATAA+CGG | 0.505224 | 3.4:-81033627 | None:intergenic |
| CATTTCAACAGGGTGCTGCC+AGG | 0.506834 | 3.4:+81037729 | MS.gene045117:intron |
| CCAATAAATCAACTTCGGCT+TGG | 0.506921 | 3.4:+81036730 | MS.gene045117:CDS |
| GTGCGGAATCTTAGCAGTGT+TGG | 0.507911 | 3.4:+81033424 | MS.gene045117:CDS |
| TGCGGAATCTTAGCAGTGTT+GGG | 0.508911 | 3.4:+81033425 | MS.gene045117:CDS |
| CAGTTACATACTTTCTGCAT+TGG | 0.510357 | 3.4:+81036028 | MS.gene045117:CDS |
| AACTTCGGCTTGGGGTATAG+AGG | 0.510802 | 3.4:+81036740 | MS.gene045117:CDS |
| TCATCAACGTCTTGCTATTG+TGG | 0.511777 | 3.4:+81033562 | MS.gene045117:CDS |
| CACTGCCATGGATATCGATC+CGG | 0.514410 | 3.4:+81036797 | MS.gene045117:CDS |
| TGCGACATAGAGGACCTGAT+TGG | 0.528704 | 3.4:+81033504 | MS.gene045117:CDS |
| GTCTTGTCATAGTTGTAAAG+AGG | 0.529718 | 3.4:-81033605 | None:intergenic |
| GGAGTGAAAATGGTTCTGTC+TGG | 0.532933 | 3.4:+81036457 | MS.gene045117:CDS |
| TTTCTGGACATAAGAAACAT+TGG | 0.539930 | 3.4:-81036421 | None:intergenic |
| GCCTCCTGGAACTGTTGACC+TGG | 0.540604 | 3.4:-81037747 | None:intergenic |
| GGTTCAGATGAAATATTTGG+AGG | 0.542536 | 3.4:+81036484 | MS.gene045117:CDS |
| AGCTGCATGAACACCAAGCG+CGG | 0.545486 | 3.4:-81037849 | None:intergenic |
| ATAAATTCTTTATCCAAGAA+CGG | 0.547808 | 3.4:-81036771 | None:intergenic |
| TGGCCCCAACCCAAATAAAG+AGG | 0.550694 | 3.4:-81034051 | None:intergenic |
| AAGTGACGAGTCCAGTCCTC+CGG | 0.552950 | 3.4:-81035945 | None:intergenic |
| AAACACTCCTACCACAAAAG+AGG | 0.557038 | 3.4:+81037530 | MS.gene045117:CDS |
| AAAATAAAAGAGCCCGACAA+TGG | 0.557915 | 3.4:+81037896 | MS.gene045117:CDS |
| GAGGTTGATCTCCAGAAGTA+GGG | 0.558161 | 3.4:-81033586 | None:intergenic |
| TGTTCATGCAGCTGCATACA+AGG | 0.562587 | 3.4:+81037859 | MS.gene045117:CDS |
| AACACTCCTACCACAAAAGA+GGG | 0.564176 | 3.4:+81037531 | MS.gene045117:CDS |
| CCAAGCGCGGCACGACCTGA+AGG | 0.564595 | 3.4:-81037836 | None:intergenic |
| TTTGCGTGAGGCCTTTGAGA+GGG | 0.566242 | 3.4:+81035239 | MS.gene045117:CDS |
| ATGATGACTGATGTACCCTT+TGG | 0.566933 | 3.4:+81035911 | MS.gene045117:CDS |
| GGCCCCAACCCAAATAAAGA+GGG | 0.568153 | 3.4:-81034050 | None:intergenic |
| AGTTTGTTGATATGCTGGAT+GGG | 0.570850 | 3.4:+81033956 | MS.gene045117:CDS |
| AATCTTAGCAGTGTTGGGTG+TGG | 0.573813 | 3.4:+81033430 | MS.gene045117:CDS |
| AGAATTTATCAACACTGCCA+TGG | 0.574909 | 3.4:+81036785 | MS.gene045117:CDS |
| TTGCTGGAATATATATGCCC+TGG | 0.575185 | 3.4:-81034991 | None:intergenic |
| AAGGCCTCACGCAAAACCGT+TGG | 0.575646 | 3.4:-81035231 | None:intergenic |
| TAACTGTGATCCCCACTGAC+GGG | 0.578963 | 3.4:-81036011 | None:intergenic |
| CCGGACAACAGAACACCAAA+GGG | 0.583577 | 3.4:-81035926 | None:intergenic |
| AGATAAAGCCTGATATTGAA+AGG | 0.584487 | 3.4:+81037151 | MS.gene045117:intron |
| CATATATATTCCAGCAAACA+GGG | 0.584924 | 3.4:+81034997 | MS.gene045117:CDS |
| GGATTTGAGAGCCGCAAAAG+AGG | 0.588975 | 3.4:+81036173 | MS.gene045117:CDS |
| ATACTGACACTGCCCGTCAG+TGG | 0.589598 | 3.4:+81035999 | MS.gene045117:CDS |
| GCGATGGTGTCGGATACAGT+TGG | 0.589745 | 3.4:+81037348 | MS.gene045117:CDS |
| TTTCCATAAGGCGCCTAACA+AGG | 0.590033 | 3.4:+81036516 | MS.gene045117:CDS |
| CAAAAGAGGGATACCACTAC+AGG | 0.590975 | 3.4:+81037544 | MS.gene045117:CDS |
| GAGAGCCAATAAATCAACTT+CGG | 0.592271 | 3.4:+81036725 | MS.gene045117:CDS |
| AATAAATCAACTTCGGCTTG+GGG | 0.592392 | 3.4:+81036732 | MS.gene045117:CDS |
| GAGTTTGTTGATATGCTGGA+TGG | 0.592504 | 3.4:+81033955 | MS.gene045117:CDS |
| GTAACTGTGATCCCCACTGA+CGG | 0.594247 | 3.4:-81036012 | None:intergenic |
| TTGCAGGAGGATTAAGAAGG+TGG | 0.595137 | 3.4:+81035160 | MS.gene045117:intron |
| GGAAGGTATAGATGCACTTG+AGG | 0.595941 | 3.4:+81036345 | MS.gene045117:intron |
| ATCAACACGCTATGATCCAA+CGG | 0.596803 | 3.4:+81035215 | MS.gene045117:CDS |
| GCATCATCGAATTGTCTCGC+AGG | 0.596887 | 3.4:+81033480 | MS.gene045117:CDS |
| TCTCGCAGGTTGCGACATAG+AGG | 0.597101 | 3.4:+81033494 | MS.gene045117:CDS |
| CCACTCCGGATCGATATCCA+TGG | 0.600070 | 3.4:-81036802 | None:intergenic |
| TGAGAATCCATATTTGCCAA+AGG | 0.602556 | 3.4:+81037212 | MS.gene045117:CDS |
| AATCCAGCATGGTCTTTAGA+GGG | 0.604010 | 3.4:-81037921 | None:intergenic |
| AAAATGGTTCTGTCTGGAGA+AGG | 0.606208 | 3.4:+81036463 | MS.gene045117:CDS |
| GGAATAGCTAACCCTCTCAA+AGG | 0.609261 | 3.4:-81035250 | None:intergenic |
| TCCGGACAACAGAACACCAA+AGG | 0.611807 | 3.4:-81035927 | None:intergenic |
| GTACTGCAAAAGCTGTGGAA+TGG | 0.613846 | 3.4:+81037786 | MS.gene045117:CDS |
| GAACAGTTCAGCGATGGTGT+CGG | 0.616755 | 3.4:+81037338 | MS.gene045117:CDS |
| GCACATATTGTACAGGCAGA+AGG | 0.619788 | 3.4:+81037316 | MS.gene045117:intron |
| TCTTTGCAGGAGGATTAAGA+AGG | 0.620740 | 3.4:+81035157 | MS.gene045117:intron |
| CAGTACTGCATGCCACACTA+GGG | 0.621411 | 3.4:-81037769 | None:intergenic |
| CAGAAGGAACAGTTCAGCGA+TGG | 0.621633 | 3.4:+81037332 | MS.gene045117:CDS |
| CAAGCGCGGCACGACCTGAA+GGG | 0.622971 | 3.4:-81037835 | None:intergenic |
| GCAGCAACCACATACCATCA+TGG | 0.631607 | 3.4:-81034071 | None:intergenic |
| TTTGGTGTTCTGTTGTCCGG+AGG | 0.633191 | 3.4:+81035929 | MS.gene045117:CDS |
| TTGTTGGCAGCCGTCATGTG+CGG | 0.647753 | 3.4:+81033407 | None:intergenic |
| CATAGAGGACCTGATTGGAG+TGG | 0.648591 | 3.4:+81033509 | MS.gene045117:CDS |
| AGTTCCAGGAGGCCCTAGTG+TGG | 0.651099 | 3.4:+81037757 | MS.gene045117:CDS |
| CTGGAATATATATGCCCTGG+AGG | 0.658198 | 3.4:-81034988 | None:intergenic |
| CTGTGGAATGGGATGCAGCA+TGG | 0.665004 | 3.4:+81037798 | MS.gene045117:CDS |
| TAGCAAGACGTTGATGAGCG+AGG | 0.666348 | 3.4:-81033556 | None:intergenic |
| CCATGGATATCGATCCGGAG+TGG | 0.674824 | 3.4:+81036802 | MS.gene045117:CDS |
| TCTATGGCGTTAGGTTAATG+GGG | 0.680597 | 3.4:+81033741 | MS.gene045117:intron |
| GCCCCAACCCAAATAAAGAG+GGG | 0.687236 | 3.4:-81034049 | None:intergenic |
| GAACTGTGAAATGAAGTTCG+TGG | 0.696854 | 3.4:-81036221 | None:intergenic |
| GCCAGGTCAACAGTTCCAGG+AGG | 0.705953 | 3.4:+81037746 | MS.gene045117:CDS |
| ATGCAGTACTGCAAAAGCTG+TGG | 0.707096 | 3.4:+81037781 | MS.gene045117:CDS |
| ATTTGCTCTGAGAACCATGG+TGG | 0.708717 | 3.4:-81035189 | None:intergenic |
| GGAATTTGCTCTGAGAACCA+TGG | 0.723639 | 3.4:-81035192 | None:intergenic |
| ACTGACACTGCCCGTCAGTG+GGG | 0.727167 | 3.4:+81036001 | MS.gene045117:CDS |
| GAAGGTGGTACAATCCACCA+TGG | 0.728627 | 3.4:+81035175 | MS.gene045117:CDS |
| CTGTGAAATGAAGTTCGTGG+TGG | 0.746248 | 3.4:-81036218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTACATAAAAATATG+GGG | - | chr3.4:81036598-81036617 | None:intergenic | 10.0% |
| !! | CAATTTATTCAAAAAAAAAA+AGG | - | chr3.4:81034515-81034534 | None:intergenic | 10.0% |
| !! | TGAATTAGATATATCATTTA+TGG | + | chr3.4:81034880-81034899 | MS.gene045117:intron | 15.0% |
| !!! | AATTATGGTATATTACTTTT+CGG | - | chr3.4:81036564-81036583 | None:intergenic | 15.0% |
| !!! | AATTTATTTTACAAGAAAAC+TGG | - | chr3.4:81037010-81037029 | None:intergenic | 15.0% |
| !!! | TTCATGTTCAAATTTAAAAT+TGG | - | chr3.4:81037656-81037675 | None:intergenic | 15.0% |
| !! | ACAGTTTAAAAAAATTACAC+AGG | - | chr3.4:81034260-81034279 | None:intergenic | 20.0% |
| !! | ACATATCTGTATAAACATTA+AGG | + | chr3.4:81034647-81034666 | MS.gene045117:intron | 20.0% |
| !! | ATAAATTCTTTATCCAAGAA+CGG | - | chr3.4:81036774-81036793 | None:intergenic | 20.0% |
| !! | CAAATGATGAAATAATTCAA+TGG | - | chr3.4:81035284-81035303 | None:intergenic | 20.0% |
| !! | CATATAACTACTATTACTTA+TGG | - | chr3.4:81036112-81036131 | None:intergenic | 20.0% |
| !! | GACATTATATACTTGATAAA+TGG | + | chr3.4:81037459-81037478 | MS.gene045117:intron | 20.0% |
| !! | TAACCAAGAAAAAGTTAAAA+AGG | - | chr3.4:81035858-81035877 | None:intergenic | 20.0% |
| !! | TACATTTCCTTGAAAAAATT+AGG | - | chr3.4:81034719-81034738 | None:intergenic | 20.0% |
| !! | TAGATATATCATTTATGGAA+GGG | + | chr3.4:81034885-81034904 | MS.gene045117:intron | 20.0% |
| !! | TATCAAGTATATAATGTCAA+TGG | - | chr3.4:81037457-81037476 | None:intergenic | 20.0% |
| !! | TTACATCATATGTTTCAATA+TGG | - | chr3.4:81036381-81036400 | None:intergenic | 20.0% |
| !! | TTAGATATATCATTTATGGA+AGG | + | chr3.4:81034884-81034903 | MS.gene045117:intron | 20.0% |
| !! | TTATAGACAAAATAAAAGTG+AGG | - | chr3.4:81035590-81035609 | None:intergenic | 20.0% |
| !! | TTCAAAGTCATACATTTAAT+TGG | + | chr3.4:81034336-81034355 | MS.gene045117:intron | 20.0% |
| !! | TTGTAAAATAAATTTGTCTG+TGG | + | chr3.4:81037016-81037035 | MS.gene045117:intron | 20.0% |
| !! | TTTACGTATAATTTCTCAAA+AGG | - | chr3.4:81035695-81035714 | None:intergenic | 20.0% |
| !!! | TGAAGCTACAAATTTTATAT+AGG | - | chr3.4:81034428-81034447 | None:intergenic | 20.0% |
| !!! | TTCAAATTTAAAATTGGTCA+AGG | - | chr3.4:81037650-81037669 | None:intergenic | 20.0% |
| ! | AAGGTAAAATGGTAGATAAA+GGG | - | chr3.4:81036261-81036280 | None:intergenic | 25.0% |
| ! | AATTTGTCGTTAATTTCATG+AGG | - | chr3.4:81037127-81037146 | None:intergenic | 25.0% |
| ! | ACACCAAAAACTTGAATAAA+CGG | - | chr3.4:81036659-81036678 | None:intergenic | 25.0% |
| ! | AGTAAAATTTAGACAGTAGA+AGG | - | chr3.4:81035094-81035113 | None:intergenic | 25.0% |
| ! | ATATCATTTGCAACAAACTT+AGG | + | chr3.4:81035609-81035628 | MS.gene045117:intron | 25.0% |
| ! | ATATTGAAAGGATAGAGAAA+TGG | + | chr3.4:81037163-81037182 | MS.gene045117:CDS | 25.0% |
| ! | TAAAGAGTTGTCTATACATT+TGG | + | chr3.4:81034828-81034847 | MS.gene045117:intron | 25.0% |
| ! | TACATTTGGTTATGTATTCA+TGG | + | chr3.4:81034842-81034861 | MS.gene045117:intron | 25.0% |
| ! | TATTGAAAGGATAGAGAAAT+GGG | + | chr3.4:81037164-81037183 | MS.gene045117:CDS | 25.0% |
| ! | TCCAGAAAAATCAAATCATT+GGG | + | chr3.4:81036436-81036455 | MS.gene045117:CDS | 25.0% |
| ! | TGTGATTAGTATGAAGAATA+TGG | + | chr3.4:81033928-81033947 | MS.gene045117:intron | 25.0% |
| ! | TTGTAACTTTACTTCTTTCT+TGG | + | chr3.4:81036834-81036853 | MS.gene045117:intron | 25.0% |
| ! | TTTACAAGAGTAACCATAAT+CGG | - | chr3.4:81035050-81035069 | None:intergenic | 25.0% |
| !! | AATTTATATCTTTTCCTCCA+GGG | + | chr3.4:81034974-81034993 | MS.gene045117:CDS | 25.0% |
| !! | AGGCATTAATCTTTTACATT+CGG | + | chr3.4:81034779-81034798 | MS.gene045117:intron | 25.0% |
| !! | GCTTTAAATTGCACAATAAA+TGG | - | chr3.4:81034162-81034181 | None:intergenic | 25.0% |
| !! | TTCTATTTTCGCTATATATC+AGG | + | chr3.4:81036324-81036343 | MS.gene045117:intron | 25.0% |
| !!! | AACATGTCCTAATTTTTTCA+AGG | + | chr3.4:81034709-81034728 | MS.gene045117:intron | 25.0% |
| !!! | ATTATTTTGCAGGATCAATA+TGG | + | chr3.4:81034911-81034930 | MS.gene045117:intron | 25.0% |
| !!! | CATCCTTTTTAACTTTTTCT+TGG | + | chr3.4:81035852-81035871 | MS.gene045117:intron | 25.0% |
| !!! | TTTTGAGAAGTTATTTCCAA+AGG | + | chr3.4:81037572-81037591 | MS.gene045117:CDS | 25.0% |
| AAAGAGGTAGCAAATTATCT+TGG | + | chr3.4:81036189-81036208 | MS.gene045117:CDS | 30.0% | |
| AAATCTCATCAATTTCGAAC+TGG | + | chr3.4:81033799-81033818 | MS.gene045117:CDS | 30.0% | |
| AAATTCCAATCATGAGCTTA+TGG | - | chr3.4:81035721-81035740 | None:intergenic | 30.0% | |
| AAGACTATACAATTCACCTT+TGG | - | chr3.4:81037591-81037610 | None:intergenic | 30.0% | |
| AATAAATGGTTCAATTCGAG+CGG | - | chr3.4:81034148-81034167 | None:intergenic | 30.0% | |
| AATAATTCAATGGATGAGAC+AGG | - | chr3.4:81035274-81035293 | None:intergenic | 30.0% | |
| AATCATCTGACAATCACAAT+TGG | - | chr3.4:81034286-81034305 | None:intergenic | 30.0% | |
| AATTCCAATCATGAGCTTAT+GGG | - | chr3.4:81035720-81035739 | None:intergenic | 30.0% | |
| AGATAAAGCCTGATATTGAA+AGG | + | chr3.4:81037151-81037170 | MS.gene045117:intron | 30.0% | |
| AGTAGAAGGAGAAAAACAAA+TGG | - | chr3.4:81035080-81035099 | None:intergenic | 30.0% | |
| AGTATCAGCCAAATATCTAT+TGG | - | chr3.4:81035984-81036003 | None:intergenic | 30.0% | |
| AGTTGATTGATACAAACCTT+TGG | - | chr3.4:81037231-81037250 | None:intergenic | 30.0% | |
| ATAAGCTCATGATTGGAATT+TGG | + | chr3.4:81035720-81035739 | MS.gene045117:intron | 30.0% | |
| ATACAAACCTTTGGCAAATA+TGG | - | chr3.4:81037222-81037241 | None:intergenic | 30.0% | |
| ATGAACCATTTCATTTCAAC+AGG | + | chr3.4:81037718-81037737 | MS.gene045117:intron | 30.0% | |
| CAAGGTAAAATGGTAGATAA+AGG | - | chr3.4:81036262-81036281 | None:intergenic | 30.0% | |
| CACAAAATGTTGTCAAATAG+CGG | + | chr3.4:81035418-81035437 | MS.gene045117:intron | 30.0% | |
| CACCAAAAACTTGAATAAAC+GGG | - | chr3.4:81036658-81036677 | None:intergenic | 30.0% | |
| CATATATATTCCAGCAAACA+GGG | + | chr3.4:81034997-81035016 | MS.gene045117:CDS | 30.0% | |
| CTTAGTATCAACTACATCAA+AGG | - | chr3.4:81035817-81035836 | None:intergenic | 30.0% | |
| GAAGGTTCAGATGAAATATT+TGG | + | chr3.4:81036481-81036500 | MS.gene045117:CDS | 30.0% | |
| GATAGAAGATAAGATACGTA+CGG | - | chr3.4:81033642-81033661 | None:intergenic | 30.0% | |
| GTCCAGAAAAATCAAATCAT+TGG | + | chr3.4:81036435-81036454 | MS.gene045117:CDS | 30.0% | |
| TATATACTTGATAAATGGCC+AGG | + | chr3.4:81037464-81037483 | MS.gene045117:intron | 30.0% | |
| TGAACCATTTCATTTCAACA+GGG | + | chr3.4:81037719-81037738 | MS.gene045117:intron | 30.0% | |
| TGTAAGTGTGTATCTTATCT+TGG | - | chr3.4:81035117-81035136 | None:intergenic | 30.0% | |
| TGTTTATACAGATATGTAGC+AGG | - | chr3.4:81034644-81034663 | None:intergenic | 30.0% | |
| TTCTCTATCCTTTCAATATC+AGG | - | chr3.4:81037162-81037181 | None:intergenic | 30.0% | |
| TTTCTGGACATAAGAAACAT+TGG | - | chr3.4:81036424-81036443 | None:intergenic | 30.0% | |
| ! | ATTTTCGCTATATATCAGGA+AGG | + | chr3.4:81036328-81036347 | MS.gene045117:intron | 30.0% |
| ! | CAATTTATATCTTTTCCTCC+AGG | + | chr3.4:81034973-81034992 | MS.gene045117:CDS | 30.0% |
| ! | TCTTGTAAGTGTTTTCTAGA+AGG | + | chr3.4:81033846-81033865 | MS.gene045117:intron | 30.0% |
| ! | TTGTCACATTTTCTGTTCTA+TGG | + | chr3.4:81033725-81033744 | MS.gene045117:intron | 30.0% |
| !! | TACCCGTTTATTCAAGTTTT+TGG | + | chr3.4:81036653-81036672 | MS.gene045117:intron | 30.0% |
| !! | TCCCAATGATTTGATTTTTC+TGG | - | chr3.4:81036440-81036459 | None:intergenic | 30.0% |
| !! | TTTTTCAGCACATATTGTAC+AGG | + | chr3.4:81037309-81037328 | MS.gene045117:intron | 30.0% |
| !!! | ATAATTTGCTACCTCTTTTG+CGG | - | chr3.4:81036187-81036206 | None:intergenic | 30.0% |
| !!! | ATTATTTTTACCCTGTTTGC+TGG | - | chr3.4:81035010-81035029 | None:intergenic | 30.0% |
| !!! | CTCGTTATTTTTTCCGATTA+TGG | + | chr3.4:81035034-81035053 | MS.gene045117:intron | 30.0% |
| !!! | GTTTCTGTCTCAATTTTTTG+TGG | - | chr3.4:81033777-81033796 | None:intergenic | 30.0% |
| AAAATAAAAGAGCCCGACAA+TGG | + | chr3.4:81037896-81037915 | MS.gene045117:CDS | 35.0% | |
| AATTCCCATAAGCTCATGAT+TGG | + | chr3.4:81035713-81035732 | MS.gene045117:intron | 35.0% | |
| AGAATTTATCAACACTGCCA+TGG | + | chr3.4:81036785-81036804 | MS.gene045117:CDS | 35.0% | |
| AGGTTACCTGTATTTCCATA+AGG | + | chr3.4:81036504-81036523 | MS.gene045117:CDS | 35.0% | |
| ATAAAAATCTCGTCTGCTCA+AGG | - | chr3.4:81036280-81036299 | None:intergenic | 35.0% | |
| ATCCATGTGCTATGCAATTA+AGG | - | chr3.4:81034549-81034568 | None:intergenic | 35.0% | |
| CAAAGACAGCAAAGTTTAAC+AGG | - | chr3.4:81035143-81035162 | None:intergenic | 35.0% | |
| CAAATCATTGGGAGTGAAAA+TGG | + | chr3.4:81036447-81036466 | MS.gene045117:CDS | 35.0% | |
| CAATAAATCAACTTCGGCTT+GGG | + | chr3.4:81036731-81036750 | MS.gene045117:CDS | 35.0% | |
| CAATGTTCAATCAACAATGC+AGG | - | chr3.4:81036919-81036938 | None:intergenic | 35.0% | |
| CAGTTACATACTTTCTGCAT+TGG | + | chr3.4:81036028-81036047 | MS.gene045117:CDS | 35.0% | |
| CTATAGGCTGTCTTATGATT+GGG | + | chr3.4:81036890-81036909 | MS.gene045117:intron | 35.0% | |
| GAGAGCCAATAAATCAACTT+CGG | + | chr3.4:81036725-81036744 | MS.gene045117:CDS | 35.0% | |
| GAGTGTTATGTCATAACTAG+AGG | + | chr3.4:81035631-81035650 | MS.gene045117:intron | 35.0% | |
| GCATATATATTCCAGCAAAC+AGG | + | chr3.4:81034996-81035015 | MS.gene045117:CDS | 35.0% | |
| GCTGATTACTATGTTCTAGT+TGG | + | chr3.4:81035744-81035763 | MS.gene045117:intron | 35.0% | |
| GGTTCAGATGAAATATTTGG+AGG | + | chr3.4:81036484-81036503 | MS.gene045117:CDS | 35.0% | |
| GTCTTGTCATAGTTGTAAAG+AGG | - | chr3.4:81033608-81033627 | None:intergenic | 35.0% | |
| GTTATACTGTGATATCATGC+AGG | + | chr3.4:81035874-81035893 | MS.gene045117:intron | 35.0% | |
| TCCATGTGCTATGCAATTAA+GGG | - | chr3.4:81034548-81034567 | None:intergenic | 35.0% | |
| TCTCAAAAATTGTCCTGTAG+TGG | - | chr3.4:81037560-81037579 | None:intergenic | 35.0% | |
| TGAGAATCCATATTTGCCAA+AGG | + | chr3.4:81037212-81037231 | MS.gene045117:CDS | 35.0% | |
| TGGTCAAGGTTATGATGAAA+AGG | - | chr3.4:81037636-81037655 | None:intergenic | 35.0% | |
| TTCTATGGCGTTAGGTTAAT+GGG | + | chr3.4:81033740-81033759 | MS.gene045117:intron | 35.0% | |
| ! | AATAAATCAACTTCGGCTTG+GGG | + | chr3.4:81036732-81036751 | MS.gene045117:CDS | 35.0% |
| ! | ACTTAATTTTCCCCCATTCA+GGG | + | chr3.4:81036144-81036163 | MS.gene045117:intron | 35.0% |
| ! | AGGCATTAAGTTGCATTTCA+TGG | - | chr3.4:81035675-81035694 | None:intergenic | 35.0% |
| ! | ATAAACGGGTAAAAGTACAC+AGG | - | chr3.4:81036644-81036663 | None:intergenic | 35.0% |
| ! | ATTTTCTGTTCTATGGCGTT+AGG | + | chr3.4:81033732-81033751 | MS.gene045117:intron | 35.0% |
| ! | GATTTTTATTGCTAGCTCGA+AGG | + | chr3.4:81036291-81036310 | MS.gene045117:intron | 35.0% |
| ! | TACAATACCATTTTCCACTC+CGG | - | chr3.4:81036819-81036838 | None:intergenic | 35.0% |
| ! | TACTTTCTGCATTGGTATAG+AGG | + | chr3.4:81036036-81036055 | MS.gene045117:CDS | 35.0% |
| ! | TTAAACTTTGCTGTCTTTGC+AGG | + | chr3.4:81035144-81035163 | MS.gene045117:intron | 35.0% |
| ! | TTCCTCTACATTAGAAGCAT+CGG | - | chr3.4:81034691-81034710 | None:intergenic | 35.0% |
| !! | AAGTTGATTTATTGGCTCTC+AGG | - | chr3.4:81036725-81036744 | None:intergenic | 35.0% |
| !! | ACAGCTCATTTTAACCATGA+GGG | - | chr3.4:81036073-81036092 | None:intergenic | 35.0% |
| !! | AGAAGAGTTTGTTGATATGC+TGG | + | chr3.4:81033951-81033970 | MS.gene045117:CDS | 35.0% |
| !! | AGTTTGTTGATATGCTGGAT+GGG | + | chr3.4:81033956-81033975 | MS.gene045117:CDS | 35.0% |
| !! | GAGGATGCTTTAAAATTCCA+GGG | - | chr3.4:81035571-81035590 | None:intergenic | 35.0% |
| !! | GTTTTCAGGGTAAACAAAGT+TGG | - | chr3.4:81037514-81037533 | None:intergenic | 35.0% |
| !! | TACAGCTCATTTTAACCATG+AGG | - | chr3.4:81036074-81036093 | None:intergenic | 35.0% |
| !! | TGAGGATGCTTTAAAATTCC+AGG | - | chr3.4:81035572-81035591 | None:intergenic | 35.0% |
| AAACACTCCTACCACAAAAG+AGG | + | chr3.4:81037530-81037549 | MS.gene045117:CDS | 40.0% | |
| AACACTCCTACCACAAAAGA+GGG | + | chr3.4:81037531-81037550 | MS.gene045117:CDS | 40.0% | |
| ACATGTCCAAAATGCATCTC+TGG | - | chr3.4:81034190-81034209 | None:intergenic | 40.0% | |
| ACCCTTAATTGCATAGCACA+TGG | + | chr3.4:81034544-81034563 | MS.gene045117:intron | 40.0% | |
| AGAACCAGTGCTGTCAATTA+TGG | - | chr3.4:81035505-81035524 | None:intergenic | 40.0% | |
| AGCACCCTGTTGAAATGAAA+TGG | - | chr3.4:81037726-81037745 | None:intergenic | 40.0% | |
| ATAACAACACCAAGCAGAAC+TGG | - | chr3.4:81035320-81035339 | None:intergenic | 40.0% | |
| ATCAACACGCTATGATCCAA+CGG | + | chr3.4:81035215-81035234 | MS.gene045117:CDS | 40.0% | |
| ATGATGACTGATGTACCCTT+TGG | + | chr3.4:81035911-81035930 | MS.gene045117:CDS | 40.0% | |
| ATGGTTCATGCATAGTCAAG+TGG | - | chr3.4:81037707-81037726 | None:intergenic | 40.0% | |
| CATTCCATAATTGACAGCAC+TGG | + | chr3.4:81035498-81035517 | MS.gene045117:intron | 40.0% | |
| CCAATAAATCAACTTCGGCT+TGG | + | chr3.4:81036730-81036749 | MS.gene045117:CDS | 40.0% | |
| CGAACTTCATTTCACAGTTC+AGG | + | chr3.4:81036224-81036243 | MS.gene045117:CDS | 40.0% | |
| GAACTGTGAAATGAAGTTCG+TGG | - | chr3.4:81036224-81036243 | None:intergenic | 40.0% | |
| GATACGTACGGTGACAATAA+CGG | - | chr3.4:81033630-81033649 | None:intergenic | 40.0% | |
| GATCATGCTAACGAACAAGT+AGG | + | chr3.4:81037386-81037405 | MS.gene045117:intron | 40.0% | |
| GCTATAGGCTGTCTTATGAT+TGG | + | chr3.4:81036889-81036908 | MS.gene045117:intron | 40.0% | |
| GGGGATAAGCACAAGAATTA+TGG | - | chr3.4:81036579-81036598 | None:intergenic | 40.0% | |
| GTGCTGTCAATTATGGAATG+CGG | - | chr3.4:81035498-81035517 | None:intergenic | 40.0% | |
| GTTCTATGGCGTTAGGTTAA+TGG | + | chr3.4:81033739-81033758 | MS.gene045117:intron | 40.0% | |
| TAATGCCTGTGTATGCTAGA+GGG | - | chr3.4:81034767-81034786 | None:intergenic | 40.0% | |
| TACTGCAAAAGCTGTGGAAT+GGG | + | chr3.4:81037787-81037806 | MS.gene045117:CDS | 40.0% | |
| TCATGCATAGTCAAGTGGTT+TGG | - | chr3.4:81037702-81037721 | None:intergenic | 40.0% | |
| TCTATGGCGTTAGGTTAATG+GGG | + | chr3.4:81033741-81033760 | MS.gene045117:intron | 40.0% | |
| TCTTTGCAGGAGGATTAAGA+AGG | + | chr3.4:81035157-81035176 | MS.gene045117:intron | 40.0% | |
| TGATGAAGCTCTTCCTTGTT+AGG | - | chr3.4:81036532-81036551 | None:intergenic | 40.0% | |
| TGCAGTGGCCAATAGATATT+TGG | + | chr3.4:81035973-81035992 | MS.gene045117:CDS | 40.0% | |
| TGCTTGTTCGTATGTCTTGA+AGG | + | chr3.4:81037260-81037279 | MS.gene045117:intron | 40.0% | |
| TGGCATTACCCCTCTTTATT+TGG | + | chr3.4:81034041-81034060 | MS.gene045117:CDS | 40.0% | |
| TTAATGCCTGTGTATGCTAG+AGG | - | chr3.4:81034768-81034787 | None:intergenic | 40.0% | |
| TTAGAATGTCCAGTTCTGCT+TGG | + | chr3.4:81035308-81035327 | MS.gene045117:intron | 40.0% | |
| TTGCTGGAATATATATGCCC+TGG | - | chr3.4:81034994-81035013 | None:intergenic | 40.0% | |
| ! | AAAATGGTTCTGTCTGGAGA+AGG | + | chr3.4:81036463-81036482 | MS.gene045117:CDS | 40.0% |
| ! | AGACTATTTTCAACTCTCCC+TGG | + | chr3.4:81035551-81035570 | MS.gene045117:intron | 40.0% |
| ! | CAGTTGGATTGATGGTTTGA+AGG | + | chr3.4:81037364-81037383 | MS.gene045117:CDS | 40.0% |
| ! | CCAAGCCGAAGTTGATTTAT+TGG | - | chr3.4:81036733-81036752 | None:intergenic | 40.0% |
| ! | CCAATTCCAGAGATGCATTT+TGG | + | chr3.4:81034181-81034200 | MS.gene045117:intron | 40.0% |
| ! | GACTTAATTTTCCCCCATTC+AGG | + | chr3.4:81036143-81036162 | MS.gene045117:intron | 40.0% |
| ! | GGCATTACCCCTCTTTATTT+GGG | + | chr3.4:81034042-81034061 | MS.gene045117:CDS | 40.0% |
| ! | TACCCCTCTTTATTTGGGTT+GGG | + | chr3.4:81034047-81034066 | MS.gene045117:CDS | 40.0% |
| ! | TTACCCCTCTTTATTTGGGT+TGG | + | chr3.4:81034046-81034065 | MS.gene045117:CDS | 40.0% |
| ! | TTCGGCAGTTGCATGATTTT+AGG | + | chr3.4:81034797-81034816 | MS.gene045117:intron | 40.0% |
| !! | CCAAAATGCATCTCTGGAAT+TGG | - | chr3.4:81034184-81034203 | None:intergenic | 40.0% |
| !! | GAGTTTGTTGATATGCTGGA+TGG | + | chr3.4:81033955-81033974 | MS.gene045117:CDS | 40.0% |
| !! | TCATCAACGTCTTGCTATTG+TGG | + | chr3.4:81033562-81033581 | MS.gene045117:CDS | 40.0% |
| !! | TGCTTGGTGTTGTTATGTAG+TGG | + | chr3.4:81035324-81035343 | MS.gene045117:intron | 40.0% |
| !!! | TTGTGGTAGGAGTGTTTTCA+GGG | - | chr3.4:81037527-81037546 | None:intergenic | 40.0% |
| !!! | TTTGTGGTAGGAGTGTTTTC+AGG | - | chr3.4:81037528-81037547 | None:intergenic | 40.0% |
| AATGCCTGTGTATGCTAGAG+GGG | - | chr3.4:81034766-81034785 | None:intergenic | 45.0% | |
| AGCATAAGAGGCTGAGCTAT+AGG | + | chr3.4:81036874-81036893 | MS.gene045117:intron | 45.0% | |
| ATCTCGTCATGCAGCATAAG+AGG | + | chr3.4:81036862-81036881 | MS.gene045117:intron | 45.0% | |
| ATGCAGTACTGCAAAAGCTG+TGG | + | chr3.4:81037781-81037800 | MS.gene045117:CDS | 45.0% | |
| ATTGCTGCTCGTGATGCTAT+TGG | + | chr3.4:81034021-81034040 | MS.gene045117:CDS | 45.0% | |
| CAAAAGAGGGATACCACTAC+AGG | + | chr3.4:81037544-81037563 | MS.gene045117:CDS | 45.0% | |
| CAATGCAAACCACTCCAATC+AGG | - | chr3.4:81033521-81033540 | None:intergenic | 45.0% | |
| CGAATTCCGCTACAAAACAG+TGG | - | chr3.4:81035459-81035478 | None:intergenic | 45.0% | |
| CTCGTCTGCTCAAGGTAAAA+TGG | - | chr3.4:81036272-81036291 | None:intergenic | 45.0% | |
| CTGGAATATATATGCCCTGG+AGG | - | chr3.4:81034991-81035010 | None:intergenic | 45.0% | |
| CTGTGAAATGAAGTTCGTGG+TGG | - | chr3.4:81036221-81036240 | None:intergenic | 45.0% | |
| GCACATATTGTACAGGCAGA+AGG | + | chr3.4:81037316-81037335 | MS.gene045117:intron | 45.0% | |
| GGAATAGCTAACCCTCTCAA+AGG | - | chr3.4:81035253-81035272 | None:intergenic | 45.0% | |
| GTACTGCAAAAGCTGTGGAA+TGG | + | chr3.4:81037786-81037805 | MS.gene045117:CDS | 45.0% | |
| GTCGGATACAGTTGGATTGA+TGG | + | chr3.4:81037356-81037375 | MS.gene045117:CDS | 45.0% | |
| GTTGGATCATAGCGTGTTGA+TGG | - | chr3.4:81035216-81035235 | None:intergenic | 45.0% | |
| TAGGCGCCTTATGGAAATAC+AGG | - | chr3.4:81036513-81036532 | None:intergenic | 45.0% | |
| TATCGATCCGGAGTGGAAAA+TGG | + | chr3.4:81036809-81036828 | MS.gene045117:CDS | 45.0% | |
| TCCAAAAATCTGGACCCTTC+AGG | + | chr3.4:81037821-81037840 | MS.gene045117:CDS | 45.0% | |
| TGCAGCATGGTCCAAAAATC+TGG | + | chr3.4:81037811-81037830 | MS.gene045117:CDS | 45.0% | |
| TGCCGATGCTTCTAATGTAG+AGG | + | chr3.4:81034686-81034705 | MS.gene045117:intron | 45.0% | |
| TGCGGAATCTTAGCAGTGTT+GGG | + | chr3.4:81033425-81033444 | MS.gene045117:CDS | 45.0% | |
| TGTTCATGCAGCTGCATACA+AGG | + | chr3.4:81037859-81037878 | MS.gene045117:CDS | 45.0% | |
| TTGCAGGAGGATTAAGAAGG+TGG | + | chr3.4:81035160-81035179 | MS.gene045117:intron | 45.0% | |
| ! | AACTTTGCTGTCTTTGCAGG+AGG | + | chr3.4:81035147-81035166 | MS.gene045117:intron | 45.0% |
| ! | AATCTTAGCAGTGTTGGGTG+TGG | + | chr3.4:81033430-81033449 | MS.gene045117:CDS | 45.0% |
| ! | ACCTGAAGGGTCCAGATTTT+TGG | - | chr3.4:81037825-81037844 | None:intergenic | 45.0% |
| ! | AGAGGTTGATCTCCAGAAGT+AGG | - | chr3.4:81033590-81033609 | None:intergenic | 45.0% |
| ! | GAGGTTGATCTCCAGAAGTA+GGG | - | chr3.4:81033589-81033608 | None:intergenic | 45.0% |
| ! | GCTATGCCACTGTTTTGTAG+CGG | + | chr3.4:81035450-81035469 | MS.gene045117:intron | 45.0% |
| ! | GGAAGGTATAGATGCACTTG+AGG | + | chr3.4:81036345-81036364 | MS.gene045117:intron | 45.0% |
| ! | GGAGTGAAAATGGTTCTGTC+TGG | + | chr3.4:81036457-81036476 | MS.gene045117:CDS | 45.0% |
| ! | GTAGTGGTATCCCTCTTTTG+TGG | - | chr3.4:81037544-81037563 | None:intergenic | 45.0% |
| ! | TCTGCATTGGTATAGAGGTC+TGG | + | chr3.4:81036041-81036060 | MS.gene045117:intron | 45.0% |
| ! | TCTTTTGCGGCTCTCAAATC+CGG | - | chr3.4:81036174-81036193 | None:intergenic | 45.0% |
| ! | TGGTATCCCTCTTTTGTGGT+AGG | - | chr3.4:81037540-81037559 | None:intergenic | 45.0% |
| ! | TTTCCATAAGGCGCCTAACA+AGG | + | chr3.4:81036516-81036535 | MS.gene045117:CDS | 45.0% |
| !! | ACCCCTCTTTATTTGGGTTG+GGG | + | chr3.4:81034048-81034067 | MS.gene045117:CDS | 45.0% |
| !! | ATTTGCTCTGAGAACCATGG+TGG | - | chr3.4:81035192-81035211 | None:intergenic | 45.0% |
| !! | CGTTTTAACCTCAACCTCGT+TGG | + | chr3.4:81034114-81034133 | MS.gene045117:intron | 45.0% |
| !! | GGAAGGGCTGATTATTTTGC+AGG | + | chr3.4:81034901-81034920 | MS.gene045117:intron | 45.0% |
| !! | GGAATTTGCTCTGAGAACCA+TGG | - | chr3.4:81035195-81035214 | None:intergenic | 45.0% |
| !! | AATTTATTCAAAAAAAAAAA+GGG | - | chr3.4:81034514-81034533 | None:intergenic | 5.0% |
| !! | ATAATAATTACATAAAAATA+TGG | - | chr3.4:81036600-81036619 | None:intergenic | 5.0% |
| !! | TAATAATTACATAAAAATAT+GGG | - | chr3.4:81036599-81036618 | None:intergenic | 5.0% |
| AAATCCGGAGAGCCCTGAAT+GGG | - | chr3.4:81036159-81036178 | None:intergenic | 50.0% | |
| AGGTCTGGACTATTCCCTCA+TGG | + | chr3.4:81036056-81036075 | MS.gene045117:intron | 50.0% | |
| ATGCCTGTGTATGCTAGAGG+GGG | - | chr3.4:81034765-81034784 | None:intergenic | 50.0% | |
| CACTGCCATGGATATCGATC+CGG | + | chr3.4:81036797-81036816 | MS.gene045117:CDS | 50.0% | |
| CAGAAGGAACAGTTCAGCGA+TGG | + | chr3.4:81037332-81037351 | MS.gene045117:CDS | 50.0% | |
| CAGTACTGCATGCCACACTA+GGG | - | chr3.4:81037772-81037791 | None:intergenic | 50.0% | |
| CATAGAGGACCTGATTGGAG+TGG | + | chr3.4:81033509-81033528 | MS.gene045117:CDS | 50.0% | |
| CCGGACAACAGAACACCAAA+GGG | - | chr3.4:81035929-81035948 | None:intergenic | 50.0% | |
| CTGTGATATCATGCAGGCTG+TGG | + | chr3.4:81035880-81035899 | MS.gene045117:intron | 50.0% | |
| CTTAGACACCAACGAGGTTG+AGG | - | chr3.4:81034125-81034144 | None:intergenic | 50.0% | |
| CTTCCTTGTTAGGCGCCTTA+TGG | - | chr3.4:81036522-81036541 | None:intergenic | 50.0% | |
| GAACAGTTCAGCGATGGTGT+CGG | + | chr3.4:81037338-81037357 | MS.gene045117:CDS | 50.0% | |
| GAAGGTGGTACAATCCACCA+TGG | + | chr3.4:81035175-81035194 | MS.gene045117:CDS | 50.0% | |
| GCAGCAACCACATACCATCA+TGG | - | chr3.4:81034074-81034093 | None:intergenic | 50.0% | |
| GCATCATCGAATTGTCTCGC+AGG | + | chr3.4:81033480-81033499 | MS.gene045117:CDS | 50.0% | |
| GCCCCAACCCAAATAAAGAG+GGG | - | chr3.4:81034052-81034071 | None:intergenic | 50.0% | |
| GCTATTGTGGACCCTACTTC+TGG | + | chr3.4:81033575-81033594 | MS.gene045117:CDS | 50.0% | |
| GGATTTGAGAGCCGCAAAAG+AGG | + | chr3.4:81036173-81036192 | MS.gene045117:CDS | 50.0% | |
| GGCCCCAACCCAAATAAAGA+GGG | - | chr3.4:81034053-81034072 | None:intergenic | 50.0% | |
| GTAACTGTGATCCCCACTGA+CGG | - | chr3.4:81036015-81036034 | None:intergenic | 50.0% | |
| GTGCGGAATCTTAGCAGTGT+TGG | + | chr3.4:81033424-81033443 | MS.gene045117:CDS | 50.0% | |
| TAACTGTGATCCCCACTGAC+GGG | - | chr3.4:81036014-81036033 | None:intergenic | 50.0% | |
| TCCGGACAACAGAACACCAA+AGG | - | chr3.4:81035930-81035949 | None:intergenic | 50.0% | |
| TGCGACATAGAGGACCTGAT+TGG | + | chr3.4:81033504-81033523 | MS.gene045117:CDS | 50.0% | |
| TGGCCCCAACCCAAATAAAG+AGG | - | chr3.4:81034054-81034073 | None:intergenic | 50.0% | |
| ! | TAGCAAGACGTTGATGAGCG+AGG | - | chr3.4:81033559-81033578 | None:intergenic | 50.0% |
| ! | TGATCCAACGGTTTTGCGTG+AGG | + | chr3.4:81035227-81035246 | MS.gene045117:CDS | 50.0% |
| ! | TTTGCGTGAGGCCTTTGAGA+GGG | + | chr3.4:81035239-81035258 | MS.gene045117:CDS | 50.0% |
| ! | TTTTGCGTGAGGCCTTTGAG+AGG | + | chr3.4:81035238-81035257 | MS.gene045117:CDS | 50.0% |
| !! | AACTTCGGCTTGGGGTATAG+AGG | + | chr3.4:81036740-81036759 | MS.gene045117:CDS | 50.0% |
| !! | CCCTTTGGTGTTCTGTTGTC+CGG | + | chr3.4:81035926-81035945 | MS.gene045117:CDS | 50.0% |
| !! | TATTTGGGTTGGGGCCATGA+TGG | + | chr3.4:81034057-81034076 | MS.gene045117:CDS | 50.0% |
| !! | TTTGGTGTTCTGTTGTCCGG+AGG | + | chr3.4:81035929-81035948 | MS.gene045117:CDS | 50.0% |
| AAGGCCTCACGCAAAACCGT+TGG | - | chr3.4:81035234-81035253 | None:intergenic | 55.0% | |
| AAGTGACGAGTCCAGTCCTC+CGG | - | chr3.4:81035948-81035967 | None:intergenic | 55.0% | |
| AATCCGGAGAGCCCTGAATG+GGG | - | chr3.4:81036158-81036177 | None:intergenic | 55.0% | |
| AGCTGCATGAACACCAAGCG+CGG | - | chr3.4:81037852-81037871 | None:intergenic | 55.0% | |
| ATACTGACACTGCCCGTCAG+TGG | + | chr3.4:81035999-81036018 | MS.gene045117:CDS | 55.0% | |
| CAAATCCGGAGAGCCCTGAA+TGG | - | chr3.4:81036160-81036179 | None:intergenic | 55.0% | |
| CCACTCCGGATCGATATCCA+TGG | - | chr3.4:81036805-81036824 | None:intergenic | 55.0% | |
| CCATGGATATCGATCCGGAG+TGG | + | chr3.4:81036802-81036821 | MS.gene045117:CDS | 55.0% | |
| CTGTGGAATGGGATGCAGCA+TGG | + | chr3.4:81037798-81037817 | MS.gene045117:CDS | 55.0% | |
| GCAGTACTGCATGCCACACT+AGG | - | chr3.4:81037773-81037792 | None:intergenic | 55.0% | |
| GTTGGGGCCATGATGGTATG+TGG | + | chr3.4:81034064-81034083 | MS.gene045117:intron | 55.0% | |
| TACTGACACTGCCCGTCAGT+GGG | + | chr3.4:81036000-81036019 | MS.gene045117:CDS | 55.0% | |
| TCAGCATTGCGTCTGTGACC+TGG | - | chr3.4:81037485-81037504 | None:intergenic | 55.0% | |
| TCTCGCAGGTTGCGACATAG+AGG | + | chr3.4:81033494-81033513 | MS.gene045117:CDS | 55.0% | |
| TGCCTGTGTATGCTAGAGGG+GGG | - | chr3.4:81034764-81034783 | None:intergenic | 55.0% | |
| TGTTCTGTTGTCCGGAGGAC+TGG | + | chr3.4:81035934-81035953 | MS.gene045117:CDS | 55.0% | |
| TTCGATGATGCGAGCGCGTT+TGG | - | chr3.4:81033471-81033490 | None:intergenic | 55.0% | |
| ! | AGAGGCACGTGTACCGTTCT+TGG | + | chr3.4:81036758-81036777 | MS.gene045117:CDS | 55.0% |
| ! | CTCGTCACTTGTTGCTGCAG+TGG | + | chr3.4:81035958-81035977 | MS.gene045117:CDS | 55.0% |
| ! | GCGATGGTGTCGGATACAGT+TGG | + | chr3.4:81037348-81037367 | MS.gene045117:CDS | 55.0% |
| !! | CATTTCAACAGGGTGCTGCC+AGG | + | chr3.4:81037729-81037748 | MS.gene045117:intron | 55.0% |
| ACTGACACTGCCCGTCAGTG+GGG | + | chr3.4:81036001-81036020 | MS.gene045117:CDS | 60.0% | |
| AGTTCCAGGAGGCCCTAGTG+TGG | + | chr3.4:81037757-81037776 | MS.gene045117:CDS | 60.0% | |
| ATCCGGAGAGCCCTGAATGG+GGG | - | chr3.4:81036157-81036176 | None:intergenic | 60.0% | |
| GAGCGGCTTAGACACCAACG+AGG | - | chr3.4:81034131-81034150 | None:intergenic | 60.0% | |
| GCCAGGTCAACAGTTCCAGG+AGG | + | chr3.4:81037746-81037765 | MS.gene045117:CDS | 60.0% | |
| GCCTCCTGGAACTGTTGACC+TGG | - | chr3.4:81037750-81037769 | None:intergenic | 60.0% | |
| GCCTGTGTATGCTAGAGGGG+GGG | - | chr3.4:81034763-81034782 | None:intergenic | 60.0% | |
| GCTGCCAGGTCAACAGTTCC+AGG | + | chr3.4:81037743-81037762 | MS.gene045117:CDS | 60.0% | |
| TCCCCCCCTCTAGCATACAC+AGG | + | chr3.4:81034759-81034778 | MS.gene045117:intron | 60.0% | |
| TTCCCCCATTCAGGGCTCTC+CGG | + | chr3.4:81036152-81036171 | MS.gene045117:intron | 60.0% | |
| CAAGCGCGGCACGACCTGAA+GGG | - | chr3.4:81037838-81037857 | None:intergenic | 65.0% | |
| CATGCCACACTAGGGCCTCC+TGG | - | chr3.4:81037764-81037783 | None:intergenic | 65.0% | |
| CCAAGCGCGGCACGACCTGA+AGG | - | chr3.4:81037839-81037858 | None:intergenic | 70.0% | |
| CCTTCAGGTCGTGCCGCGCT+TGG | + | chr3.4:81037836-81037855 | MS.gene045117:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 81033422 | 81037928 | 81033422 | ID=MS.gene045117 |
| chr3.4 | mRNA | 81033422 | 81037928 | 81033422 | ID=MS.gene045117.t1;Parent=MS.gene045117 |
| chr3.4 | exon | 81033422 | 81033640 | 81033422 | ID=MS.gene045117.t1.exon1;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81033422 | 81033640 | 81033422 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81033754 | 81033849 | 81033754 | ID=MS.gene045117.t1.exon2;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81033754 | 81033849 | 81033754 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81033937 | 81034078 | 81033937 | ID=MS.gene045117.t1.exon3;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81033937 | 81034078 | 81033937 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81034923 | 81035018 | 81034923 | ID=MS.gene045117.t1.exon4;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81034923 | 81035018 | 81034923 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81035166 | 81035260 | 81035166 | ID=MS.gene045117.t1.exon5;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81035166 | 81035260 | 81035166 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81035896 | 81036057 | 81035896 | ID=MS.gene045117.t1.exon6;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81035896 | 81036057 | 81035896 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81036165 | 81036245 | 81036165 | ID=MS.gene045117.t1.exon7;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81036165 | 81036245 | 81036165 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81036346 | 81036567 | 81036346 | ID=MS.gene045117.t1.exon8;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81036346 | 81036567 | 81036346 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81036696 | 81036830 | 81036696 | ID=MS.gene045117.t1.exon9;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81036696 | 81036830 | 81036696 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81037153 | 81037233 | 81037153 | ID=MS.gene045117.t1.exon10;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81037153 | 81037233 | 81037153 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81037317 | 81037403 | 81037317 | ID=MS.gene045117.t1.exon11;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81037317 | 81037403 | 81037317 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81037486 | 81037593 | 81037486 | ID=MS.gene045117.t1.exon12;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81037486 | 81037593 | 81037486 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| chr3.4 | exon | 81037740 | 81037928 | 81037740 | ID=MS.gene045117.t1.exon13;Parent=MS.gene045117.t1 |
| chr3.4 | CDS | 81037740 | 81037928 | 81037740 | ID=cds.MS.gene045117.t1;Parent=MS.gene045117.t1 |
| Gene Sequence |
| Protein sequence |
