AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28922


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28922.t1 MTR_4g076210 98.146 809 5 1 1 809 1 799 0.0 1615
MS.gene28922.t1 MTR_3g109922 33.702 724 405 16 12 679 18 722 7.14e-111 358
MS.gene28922.t1 MTR_5g079920 34.389 221 128 4 24 243 41 245 2.36e-29 126
MS.gene28922.t1 MTR_5g079920 29.697 330 201 7 238 547 322 640 1.30e-22 104
MS.gene28922.t1 MTR_4g008250 21.218 476 312 12 19 466 21 461 8.43e-15 79.3
MS.gene28922.t1 MTR_1g040420 100.000 29 0 0 1 29 1 29 5.44e-13 65.1
MS.gene28922.t1 MTR_3g118335 96.552 29 1 0 1 29 1 29 2.37e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28922.t1 AT4G23460 87.331 813 82 4 1 809 1 796 0.0 1415
MS.gene28922.t1 AT4G11380 87.531 810 87 3 1 809 1 797 0.0 1391
MS.gene28922.t1 AT4G11380 85.216 832 87 4 1 809 1 819 0.0 1377
MS.gene28922.t1 AT4G23460 87.147 708 80 3 106 809 2 702 0.0 1237
MS.gene28922.t1 AT5G11490 35.430 604 354 13 12 595 17 604 2.02e-106 346
MS.gene28922.t1 AT5G11490 35.430 604 354 13 12 595 17 604 2.29e-106 347
MS.gene28922.t1 AT5G11490 35.866 566 334 12 43 595 1 550 2.78e-101 332
MS.gene28922.t1 AT3G55480 36.199 221 124 4 24 243 41 245 2.99e-28 122
MS.gene28922.t1 AT3G55480 28.399 331 203 9 251 558 339 658 3.34e-22 103
MS.gene28922.t1 AT3G55480 28.399 331 203 9 251 558 211 530 4.22e-22 102

Find 184 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTGCTCTCTCTAATTTAA+TGG 0.158134 4.4:+34237853 None:intergenic
CAAATGTGTTCTTGTTAAAT+TGG 0.165232 4.4:+34235010 None:intergenic
TTGCATGCAAACAGAAAATT+TGG 0.170636 4.4:-34241863 MS.gene28922:CDS
CGAGCTTCTTGAAAGTTTCT+TGG 0.175476 4.4:-34237414 MS.gene28922:CDS
GACCAGCCAGCTGCTCCTTC+AGG 0.234375 4.4:-34235992 MS.gene28922:CDS
CTCACAAAGAGTTGCAATTA+TGG 0.248644 4.4:+34237606 None:intergenic
AATTCTTGCACATGAAATTA+AGG 0.258946 4.4:-34238721 MS.gene28922:intron
ACATTTGGTCTTGCAGCTGC+TGG 0.280676 4.4:-34234994 MS.gene28922:CDS
TGATCCTATATATGTGAAAA+TGG 0.282338 4.4:-34238558 MS.gene28922:CDS
TTGGACTAGCGCAGGTTCTT+CGG 0.290227 4.4:+34237382 None:intergenic
AATTCTCAAGTTCCACTTGA+TGG 0.296428 4.4:-34235042 MS.gene28922:CDS
TTAAGCTCTTCTTTGAGTTC+AGG 0.296920 4.4:+34243260 None:intergenic
ACAGCTAAGGCACGAATTAA+AGG 0.297318 4.4:+34241469 None:intergenic
AAGGCACGAATTAAAGGATT+TGG 0.302488 4.4:+34241475 None:intergenic
TGGACTAGCGCAGGTTCTTC+GGG 0.303916 4.4:+34237383 None:intergenic
TGCGGCACTCGCTGAAATTC+AGG 0.309014 4.4:-34241084 MS.gene28922:CDS
GCATCAATGATCTGGATAAT+TGG 0.309591 4.4:-34237467 MS.gene28922:CDS
AGCTTACCTGGTCTATATTT+CGG 0.310084 4.4:+34238501 None:intergenic
GCGGACCTTGGGACATGTTC+TGG 0.317144 4.4:+34234822 None:intergenic
GGCCCTCAGTTGGCTTCTTA+AGG 0.329378 4.4:+34237327 None:intergenic
GGGCCCACAGCAGATGATTC+AGG 0.341638 4.4:-34237309 MS.gene28922:intron
TGCAGCTGCTGGGCCCCTGC+AGG 0.346760 4.4:-34234983 MS.gene28922:intron
AAATCAGTGCACAGCTTACT+AGG 0.371520 4.4:-34235104 MS.gene28922:CDS
ACTGCCTGCTTCAACTGGTC+AGG 0.372776 4.4:-34235133 MS.gene28922:CDS
AGAAAGGCTGTTCGTGCAAT+TGG 0.378274 4.4:-34237884 MS.gene28922:CDS
CAATTTAACAAGAACACATT+TGG 0.378772 4.4:-34235009 MS.gene28922:CDS
GTGCGGGTAACAAATGCTTC+AGG 0.379627 4.4:+34236232 None:intergenic
ATCAAATCACCAAGTAAATC+TGG 0.390549 4.4:+34236046 None:intergenic
GAAAGAAAACAATACGTGTT+GGG 0.396780 4.4:+34237731 None:intergenic
ACCAGCCAGCTGCTCCTTCA+GGG 0.397538 4.4:-34235991 MS.gene28922:intron
CGACAGTACAACTGCACAAT+TGG 0.398220 4.4:+34239033 None:intergenic
AGTGTCCTAGCTGATGTTCC+AGG 0.404154 4.4:+34234863 None:intergenic
AGATTTACTTGGTGATTTGA+TGG 0.408236 4.4:-34236044 MS.gene28922:CDS
TATGCACGATCTCGCAAATC+AGG 0.410180 4.4:+34236703 None:intergenic
TGTTACCCGCACACTTGCTT+CGG 0.411432 4.4:-34236221 MS.gene28922:CDS
TAAGCTCTTCTTTGAGTTCA+GGG 0.415409 4.4:+34243261 None:intergenic
GAGATCGTGCATACATATAT+TGG 0.416999 4.4:-34236693 MS.gene28922:CDS
ATTTCATGTGCAAGAATTGT+CGG 0.420714 4.4:+34238726 None:intergenic
CTGGACAGGCATCAATGATC+TGG 0.425383 4.4:-34237475 MS.gene28922:intron
GCCTTAGCTGTGCGAACAAT+GGG 0.427730 4.4:-34241457 MS.gene28922:CDS
ATCTGCTGTGGGCCCTCAGT+TGG 0.429553 4.4:+34237317 None:intergenic
AGTTGTACTGTCGGCTGTTA+AGG 0.429858 4.4:-34239023 MS.gene28922:intron
GTTGTACTGCCTGCTTCAAC+TGG 0.430164 4.4:-34235138 MS.gene28922:CDS
GCTGCTGTCTTGCGAACATA+TGG 0.433079 4.4:+34241224 None:intergenic
TCATCTGTAAATCCTGCTAA+TGG 0.446043 4.4:-34236151 MS.gene28922:CDS
CTTCGTGGTGGAGAAGTACT+TGG 0.446421 4.4:+34243295 None:intergenic
GACAACATATACCTTGGCTT+CGG 0.450600 4.4:+34237561 None:intergenic
CATTTGGTCTTGCAGCTGCT+GGG 0.453532 4.4:-34234993 MS.gene28922:CDS
GTTGAAGCAGGCAGTACAAC+GGG 0.454683 4.4:+34235141 None:intergenic
GTAGATGATCCTTCAACAAA+TGG 0.459935 4.4:-34238883 MS.gene28922:intron
GCACCTTTAGACATCTTTGA+AGG 0.459959 4.4:+34241392 None:intergenic
GTAAATCCTGCTAATGGCCC+TGG 0.460366 4.4:-34236145 MS.gene28922:CDS
ACAACATATACCTTGGCTTC+GGG 0.464005 4.4:+34237562 None:intergenic
AGATGCAGGTATTGTATAGC+TGG 0.467714 4.4:+34236108 None:intergenic
AGGGCAACATATTGTATCTC+AGG 0.473365 4.4:+34238780 None:intergenic
AACTGAGCTAGGCGGACCTT+GGG 0.475776 4.4:+34234811 None:intergenic
GATTTACTTGGTGATTTGAT+GGG 0.477092 4.4:-34236043 MS.gene28922:CDS
GAAGCTGGTGCCACAGATGC+AGG 0.477195 4.4:+34236094 None:intergenic
ACCCTGAAGGAGCAGCTGGC+TGG 0.481300 4.4:+34235990 None:intergenic
CGCAGTAAATACATTTGTAA+AGG 0.483737 4.4:-34241773 MS.gene28922:CDS
GTACTTCTCCACCACGAAGA+AGG 0.486120 4.4:-34243291 MS.gene28922:CDS
GTGAAAAGAGATCAAATGAA+TGG 0.487560 4.4:+34234662 None:intergenic
AACAACCATTGGATTATTGT+CGG 0.490394 4.4:+34241118 None:intergenic
CGAGTATAGCAAGGTCCGGC+TGG 0.491866 4.4:+34241794 None:intergenic
CTGCCTGCTTCAACTGGTCA+GGG 0.498842 4.4:-34235132 MS.gene28922:CDS
GCACCAGTGCCAGATTTACT+TGG 0.499633 4.4:-34236055 MS.gene28922:CDS
CACCTTTAGACATCTTTGAA+GGG 0.501807 4.4:+34241393 None:intergenic
CAGGTTCCACAATTGCAACC+TGG 0.502234 4.4:-34234881 MS.gene28922:CDS
GGTGACCCAGGGCCATTAGC+AGG 0.502483 4.4:+34236139 None:intergenic
ACTCACCCTGAAGGAGCAGC+TGG 0.503317 4.4:+34235986 None:intergenic
ATACAGCTTTGCAACACAAA+TGG 0.504157 4.4:+34241202 None:intergenic
TGCGGGTAACAAATGCTTCA+GGG 0.508754 4.4:+34236233 None:intergenic
ATGCAGAGTTAGTTGAGGAC+AGG 0.508869 4.4:-34241172 MS.gene28922:CDS
AAACTGAGCTAGGCGGACCT+TGG 0.509914 4.4:+34234810 None:intergenic
TCAATCTTATTGTACAAAGA+AGG 0.511281 4.4:-34238749 MS.gene28922:CDS
CAATAAGATTGATATTTCGC+AGG 0.512583 4.4:+34238760 None:intergenic
GCAACCTGTAAAACTGAGCT+AGG 0.514067 4.4:+34234800 None:intergenic
AGCTAGGACACTCCTTCCTA+TGG 0.514389 4.4:-34234852 MS.gene28922:CDS
ACAGCATTAGCAACAACCAT+TGG 0.514656 4.4:+34241107 None:intergenic
GCAGAAGGTGGAGGTGAAGC+TGG 0.515961 4.4:+34236079 None:intergenic
TGATGAGTTCCATTTGTTGA+AGG 0.516207 4.4:+34238874 None:intergenic
GACTCGGATTCACTTCCATC+AGG 0.516290 4.4:+34236172 None:intergenic
ATGACTAGTGATCTCAAAGA+TGG 0.516546 4.4:+34241046 None:intergenic
TCACCAGCACTGATGTGGTC+CGG 0.520844 4.4:-34238854 MS.gene28922:CDS
TGCCTTAGCTGTGCGAACAA+TGG 0.521875 4.4:-34241458 MS.gene28922:CDS
CAATTGGCATGCTGTAACCG+TGG 0.521968 4.4:+34239049 None:intergenic
TTTGAGTCATCAGTTATCAC+AGG 0.523584 4.4:+34236328 None:intergenic
AGGGATTTCACCCTTCTTCG+TGG 0.524514 4.4:+34243280 None:intergenic
TAGCTGTCAGCAATTGTAGT+TGG 0.528611 4.4:+34237363 None:intergenic
ACTTGGTGATTTGATGGGCA+TGG 0.533230 4.4:-34236038 MS.gene28922:CDS
TCCCATTGTTCGCACAGCTA+AGG 0.534752 4.4:+34241456 None:intergenic
ATTCCGGACCACATCAGTGC+TGG 0.535891 4.4:+34238851 None:intergenic
AGAGCTTAATTCTCAGTACA+AGG 0.537889 4.4:-34243246 MS.gene28922:intron
AGCAGGATTTACAGATGACT+CGG 0.538019 4.4:+34236156 None:intergenic
TACTTCTCCACCACGAAGAA+GGG 0.538973 4.4:-34243290 MS.gene28922:CDS
AGAAGCTCGTCAAGTAGAGA+AGG 0.541367 4.4:+34236295 None:intergenic
ATTGTATAGCTGGAAGTAGG+AGG 0.543155 4.4:+34236118 None:intergenic
CTTGGCTTCGGGCTCATCCA+AGG 0.543269 4.4:+34237573 None:intergenic
TCCCCTTCAAAGATGTCTAA+AGG 0.544453 4.4:-34241395 MS.gene28922:intron
GTGATTGCTGCTATGACGGT+TGG 0.547275 4.4:-34241922 MS.gene28922:CDS
GGCAGTACAACGGGCAAAGG+AGG 0.547858 4.4:+34235150 None:intergenic
CAGTGCACAGCTTACTAGGC+GGG 0.548300 4.4:-34235100 MS.gene28922:CDS
CTGGAAGTAGGAGGTGACCC+AGG 0.552629 4.4:+34236127 None:intergenic
AGTAAATTATGTGGTTCAAG+AGG 0.554444 4.4:-34237789 MS.gene28922:CDS
TCTGGCACTGGTGCAGCAGA+AGG 0.554699 4.4:+34236064 None:intergenic
AATTGTAGTTGGACTAGCGC+AGG 0.556300 4.4:+34237374 None:intergenic
AATAAGATTGATATTTCGCA+GGG 0.557713 4.4:+34238761 None:intergenic
GCAGGCAGTACAACGGGCAA+AGG 0.558226 4.4:+34235147 None:intergenic
AAAATATACAGACAAAAGAA+TGG 0.558273 4.4:+34241735 None:intergenic
ACTGCGAGTATAGCAAGGTC+CGG 0.558284 4.4:+34241790 None:intergenic
TGCAGAGTTAGTTGAGGACA+GGG 0.558569 4.4:-34241171 MS.gene28922:CDS
TTGTCTTCTCCAGGCAGCTA+AGG 0.559259 4.4:-34236371 MS.gene28922:intron
CTGGGCCGAAGCAAGTGTGC+GGG 0.559342 4.4:+34236216 None:intergenic
GGCACTGGTGCAGCAGAAGG+TGG 0.559619 4.4:+34236067 None:intergenic
AAACCCTGACCAGTTGAAGC+AGG 0.559737 4.4:+34235129 None:intergenic
AATTGGCATGCTGTAACCGT+GGG 0.561317 4.4:+34239050 None:intergenic
GGTATTGTATAGCTGGAAGT+AGG 0.565421 4.4:+34236115 None:intergenic
TTGTGAGAGCTTAGACACCT+TGG 0.567706 4.4:-34237590 MS.gene28922:CDS
CTTGGATGAGCCCGAAGCCA+AGG 0.568294 4.4:-34237572 MS.gene28922:intron
GGAGCAGCTGGCTGGTCAAG+AGG 0.568350 4.4:+34235998 None:intergenic
TTCCTTAAGAAGCCAACTGA+GGG 0.569283 4.4:-34237329 MS.gene28922:CDS
TCACCAAGTAAATCTGGCAC+TGG 0.569726 4.4:+34236052 None:intergenic
TAAATCCTGCTAATGGCCCT+GGG 0.570659 4.4:-34236144 MS.gene28922:CDS
TCTGGGCCGAAGCAAGTGTG+CGG 0.572053 4.4:+34236215 None:intergenic
CAAGATAAAAGTAAATTATG+TGG 0.572985 4.4:-34237798 MS.gene28922:CDS
GATGTTCCAGGTTGCAATTG+TGG 0.573549 4.4:+34234875 None:intergenic
AGGACCTGAATCATCTGCTG+TGG 0.575338 4.4:+34237305 None:intergenic
GAGAGTAATGTCACAAGAGG+AGG 0.579273 4.4:+34238810 None:intergenic
ACCTTTAGACATCTTTGAAG+GGG 0.581523 4.4:+34241394 None:intergenic
TGCTGCTATGACGGTTGGAA+AGG 0.583395 4.4:-34241917 MS.gene28922:CDS
GGACCTGAATCATCTGCTGT+GGG 0.583785 4.4:+34237306 None:intergenic
TGGATCATGAATCCATCAAG+TGG 0.585680 4.4:+34235030 None:intergenic
AAGAGATCAAATGAATGGAA+AGG 0.586119 4.4:+34234667 None:intergenic
GTATGCAATATTAACCTGCA+GGG 0.586830 4.4:+34234969 None:intergenic
CTATACAATACCTGCATCTG+TGG 0.587131 4.4:-34236104 MS.gene28922:CDS
GATATCCGACAATAATCCAA+TGG 0.589535 4.4:-34241123 MS.gene28922:CDS
GAAGATGATGACTATCCTGA+TGG 0.589822 4.4:-34236187 MS.gene28922:CDS
GGTTGTTGCTAATGCTGTTG+CGG 0.590538 4.4:-34241102 MS.gene28922:CDS
AAAGAAAACAATACGTGTTG+GGG 0.594450 4.4:+34237732 None:intergenic
AAATTATGCAAAGAGCCAGC+CGG 0.594573 4.4:-34241809 MS.gene28922:CDS
AAACCTCAGGGTCAGTTGAG+AGG 0.598260 4.4:+34236665 None:intergenic
ATGGAAAGGTATATACCTCA+AGG 0.599552 4.4:+34234681 None:intergenic
CAAGGCTGCTGATGCACGTG+AGG 0.600260 4.4:-34239098 MS.gene28922:CDS
ACGCTCCATTCTACCATCCT+CGG 0.600658 4.4:+34234712 None:intergenic
GGACGCTCTTTCTAGATACA+AGG 0.603895 4.4:-34239116 MS.gene28922:CDS
TGAAATACCACACAGGCTGT+TGG 0.604545 4.4:+34234765 None:intergenic
ACTGGTGCAGCAGAAGGTGG+AGG 0.605496 4.4:+34236070 None:intergenic
GATTTCACCCTTCTTCGTGG+TGG 0.607571 4.4:+34243283 None:intergenic
AGGACGGAGCAAAGATGAGT+CGG 0.608099 4.4:-34243325 None:intergenic
AAAAGTGATTGCTGCTATGA+CGG 0.608991 4.4:-34241926 MS.gene28922:CDS
TGGAAGTAGGAGGTGACCCA+GGG 0.612011 4.4:+34236128 None:intergenic
TGACTAGTGATCTCAAAGAT+GGG 0.615432 4.4:+34241047 None:intergenic
GGTATATACCTCAAGGAAAG+CGG 0.620389 4.4:+34234688 None:intergenic
GGAGCGTGCCGCTTTCCTTG+AGG 0.622922 4.4:-34234696 MS.gene28922:CDS
ACTCATCACCAGCACTGATG+TGG 0.625166 4.4:-34238859 MS.gene28922:CDS
GCACAGCTTACTAGGCGGGA+TGG 0.629272 4.4:-34235096 MS.gene28922:CDS
ATGTTCTGGAACATAACCAT+AGG 0.629968 4.4:+34234836 None:intergenic
TTTCCTTAAGAAGCCAACTG+AGG 0.630085 4.4:-34237330 MS.gene28922:CDS
CAATTGTGCAGTTGTACTGT+CGG 0.632558 4.4:-34239032 MS.gene28922:CDS
GCTGAGAGTAATGTCACAAG+AGG 0.637155 4.4:+34238807 None:intergenic
CATAAATGCAGAGTTAGTTG+AGG 0.639011 4.4:-34241177 MS.gene28922:CDS
TATTTACTGCGAGTATAGCA+AGG 0.641042 4.4:+34241785 None:intergenic
GCGGGTAACAAATGCTTCAG+GGG 0.645661 4.4:+34236234 None:intergenic
TCTGGAACATAACCATAGGA+AGG 0.648359 4.4:+34234840 None:intergenic
TATGCAATATTAACCTGCAG+GGG 0.649782 4.4:+34234970 None:intergenic
CTGGATAATTGGTGAATATG+CGG 0.650182 4.4:-34237456 MS.gene28922:CDS
TACATTCATTTAATGCAGTG+AGG 0.651493 4.4:+34241009 None:intergenic
TCTCCTCTCAACTGACCCTG+AGG 0.655441 4.4:-34236668 MS.gene28922:intron
CGGGTAACAAATGCTTCAGG+GGG 0.655514 4.4:+34236235 None:intergenic
AAAACAACCAACAGCCTGTG+TGG 0.657599 4.4:-34234772 MS.gene28922:CDS
AAGGGGATCACATAGATACT+CGG 0.661548 4.4:+34241411 None:intergenic
ATGTTCCAGAACATGTCCCA+AGG 0.663630 4.4:-34234827 MS.gene28922:CDS
AGTTGAAGCAGGCAGTACAA+CGG 0.667803 4.4:+34235140 None:intergenic
TTCAGACCGAAATATAGACC+AGG 0.671852 4.4:-34238507 MS.gene28922:intron
AACAATGGGATGCATTCGTG+TGG 0.671970 4.4:-34241443 MS.gene28922:CDS
GGACTAGCGCAGGTTCTTCG+GGG 0.672753 4.4:+34237384 None:intergenic
TGCAACCTGGAACATCAGCT+AGG 0.680770 4.4:-34234868 MS.gene28922:CDS
CGTCAAGTAGAGAAGGATCG+AGG 0.683311 4.4:+34236302 None:intergenic
GCAGAGTTAGTTGAGGACAG+GGG 0.685720 4.4:-34241170 MS.gene28922:CDS
TTGTAGAAAGAGTTACCCCA+CGG 0.695569 4.4:-34239066 MS.gene28922:CDS
ACCTGTAAAACTGAGCTAGG+CGG 0.713408 4.4:+34234803 None:intergenic
ATTGGCATGCTGTAACCGTG+GGG 0.715992 4.4:+34239051 None:intergenic
TCAGTGCACAGCTTACTAGG+CGG 0.719987 4.4:-34235101 MS.gene28922:CDS
TTATCGTTGAAATACCACAC+AGG 0.723681 4.4:+34234758 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.4 gene 34234673 34243333 34234673 ID=MS.gene28922
chr4.4 mRNA 34234673 34243333 34234673 ID=MS.gene28922.t1;Parent=MS.gene28922
chr4.4 exon 34243247 34243333 34243247 ID=MS.gene28922.t1.exon1;Parent=MS.gene28922.t1
chr4.4 CDS 34243247 34243333 34243247 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34241744 34241971 34241744 ID=MS.gene28922.t1.exon2;Parent=MS.gene28922.t1
chr4.4 CDS 34241744 34241971 34241744 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34241396 34241509 34241396 ID=MS.gene28922.t1.exon3;Parent=MS.gene28922.t1
chr4.4 CDS 34241396 34241509 34241396 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34241005 34241255 34241005 ID=MS.gene28922.t1.exon4;Parent=MS.gene28922.t1
chr4.4 CDS 34241005 34241255 34241005 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34239024 34239159 34239024 ID=MS.gene28922.t1.exon5;Parent=MS.gene28922.t1
chr4.4 CDS 34239024 34239159 34239024 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34238722 34238901 34238722 ID=MS.gene28922.t1.exon6;Parent=MS.gene28922.t1
chr4.4 CDS 34238722 34238901 34238722 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34238508 34238600 34238508 ID=MS.gene28922.t1.exon7;Parent=MS.gene28922.t1
chr4.4 CDS 34238508 34238600 34238508 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34237746 34237957 34237746 ID=MS.gene28922.t1.exon8;Parent=MS.gene28922.t1
chr4.4 CDS 34237746 34237957 34237746 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34237573 34237636 34237573 ID=MS.gene28922.t1.exon9;Parent=MS.gene28922.t1
chr4.4 CDS 34237573 34237636 34237573 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34237310 34237489 34237310 ID=MS.gene28922.t1.exon10;Parent=MS.gene28922.t1
chr4.4 CDS 34237310 34237489 34237310 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34236669 34236761 34236669 ID=MS.gene28922.t1.exon11;Parent=MS.gene28922.t1
chr4.4 CDS 34236669 34236761 34236669 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34235992 34236380 34235992 ID=MS.gene28922.t1.exon12;Parent=MS.gene28922.t1
chr4.4 CDS 34235992 34236380 34235992 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34234984 34235173 34234984 ID=MS.gene28922.t1.exon13;Parent=MS.gene28922.t1
chr4.4 CDS 34234984 34235173 34234984 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
chr4.4 exon 34234673 34234900 34234673 ID=MS.gene28922.t1.exon14;Parent=MS.gene28922.t1
chr4.4 CDS 34234673 34234900 34234673 ID=cds.MS.gene28922.t1;Parent=MS.gene28922.t1
Gene Sequence

>MS.gene28922

ATGAGTCGGAACGACTCCAAGTACTTCTCCACCACGAAGAAGGGTGAAATCCCTGAACTCAAAGAAGAGCTTAATTCTCAGTACAAGGTTCCTTTCCCTCAGATCCCGATCCGTTTTCTCTTTTTTCATAATTTCCATTTCTAGATCCGATTTCACTTCCTTCATCTTTTTCTACCTCCGTATTTCTGATCTGGATAATTAGGTGTTTACGATTCGTGGATGCGTACATAATTCAATTACCGAACCAATTATGCAAATGTTGATGATGCACAATTGTAGATTAATGATTCTCAGTTATTTACTGATTCACCTTTAAACTGTTTGTTATTACTCAGTTAATAGCTTATTAAAATTCTTTGTACTTGTGTTTTGTTCATGTTTCCTATTTCTGAATTTCGTTTCTAGCTTAACATATTTGATTTTTGTATTATTTATTCTATCAGTTAGATTCCAGGAAATTTAGTATTACATTGAAAATTATGAATATTTTACATTTAGAAAAGATGGTGGGGTAGATTCTGTAGTAAGGAGAGTAGAGTAGATCAGATGGGTAGTAGGCAAATCACTGGAGGCAGATGATGCCGTAGAAAAACTGTAGGAGAAACTATTAAAAAGTATCTAGAGATTAATGAGTTGGATGGAGATCTAATATACAATAGAACTTTATGGCGTCGTTCGATCCATGCAGCCTGTCTCACTTAGTGGGATTAGACTTTATTATTTTTTGTATTAAGAATATTTACATTATTATCGTGGTGCGATTTGTTTATACTCTCATTAACAACTCATTATTATAATAGAAATACGTGTTTGGTTGTTTTTAATTTGTTAGAGTGTTTGTCTTACTTTTTATTGTAGTCACTTTAATTTTCCATTGTCAAGGATTGTGTGTAAGGTGTCTGGGTAGTTAAAATCTCGATTTGAATCATAGAGTCTCAAGATTTTGTGGTTATGCTTGCCCTCAGCGATTAAGAATATACACTGAATCCTATTTTGGTGAAATTGGGTGGAATCACCCTTTGTTGATCGTTGAATTGTATATTCTATTATCTTCAAAACGTTTCTGCGATTATGTTTTCGAATGAATTTAAATTTGTGTTAGTATTTGAAGTGTGATTTAAGGTAACTACCATAGATGTCAGCTATTTCAAGTGATTTAATGTTTTCTTTGTCTTATGAATGCTATTATATATGCATTTATGTGAATTTATATGCATATATATGAGTTTTATTAATTTTGCATAATTTTACAATTAGTGTTACGGTTCTACAATTTACGATTTTATTTCCCCTTCCCGATTTTGTGTAAAATCTCGATTTGACTACCTCGAGTCTAACTTCTATTTATTTTATGTTTTTTAGGATAAGAGAAAAGATGCAGTGAAAAAAGTGATTGCTGCTATGACGGTTGGAAAGGATGTGTCATCACTGTTTACAGATGTAGTGAATTGCATGCAAACAGAAAATTTGGAGCTGAAAAAGTTGGTATACTTGTATCTGATAAATTATGCAAAGAGCCAGCCGGACCTTGCTATACTCGCAGTAAATACATTTGTAAAGGTGAAAGCTCGAATGACCATTCTTTTGTCTGTATATTTTCCTTACTTTCATTCAATGTCTTTTTGTATCATTTCTTTTTTTACTCTTTGCTATTGCTAATTTCTTGGATTTTGAGGTTCTCGAGTCTATATAATACTATATATGTTTTCCCTCCCCATCTTGTGCTCCCAATTTATGTTTAGAATAACTTATTGTTCCCCAACTCTTACTCATGGCAGTTGAATGTTGTATGACAAAATTTTCATTTTATGAAATGCTGCTCAGGATTCACAAGATCCAAATCCTTTAATTCGTGCCTTAGCTGTGCGAACAATGGGATGCATTCGTGTGGATAAAATTACCGAGTATCTATGTGATCCCCTTCAAAGATGTCTAAAGGTGCATATACACAATTCTTTTATAATTCTCCCATGTCTATTTTTTAGTTTGATTTTATTTCTTATTGTGTTGATTCCGGTGACATTCGTATTTGGACTAACTATTTGTAATCCGTGCTTGTGTTTGATATATATTGACAGGACGATGATCCATATGTTCGCAAGACAGCAGCCATTTGTGTTGCAAAGCTGTATGACATAAATGCAGAGTTAGTTGAGGACAGGGGTTTTTTGGAATCACTGAAGGATTTGATATCCGACAATAATCCAATGGTTGTTGCTAATGCTGTTGCGGCACTCGCTGAAATTCAGGACAATAGCACTAGACCCATCTTTGAGATCACTAGTCATACACTGTCAAAGCTCCTCACTGCATTAAATGAATGTACAGAGTAAGTCTGTGTTTTGAAATTTTGTTCTTATAATTGAGATTTAAAATACTTTCGACTTTATAGTGCAACTCCTCTGATAGGTACTGTTTCAGAATATAGAAGAAAACAGTGTTCGTTGGTAGAAACTTGATTACATTCCAAGTATTTGAGTGACTTAGTTCTCCCCCTGCTCTAAGATCCTCTCCAAAACTAATGATGTCCCCTCTAATAAAACAGTGTTTATTGGTTAAACCTCTATTACATTCCAGGTATTTGAGTGACCTAGTCTCTCCTCCTCTTAGATCCTCTCCAAAATTAATTGTGTCCCCTCTAATAAATCTTCTGTTTCTCTTATTTATAACCTACCATCTCTCACTACCTAACCAACTAACTATTCAACTGCTCCCCCCATTTCATATTGACTGTCACTCTTAGGGATGGCAATTGGACCCAGGCCCGATGGGCACCCGCAAAAAATACCCGCAATGGGTAGGGTAAAACCCCGCTTTTATAGGTATGGGTTTGGGTCCGGGTAATTACCTGCAAATTTAGATGGGTATGGGTGCGGGTAAGGGCACTATACTACCCATCCCCGCAACCCGCATATACATATTTATATAATATAGTAAATATTTTATTTATTTTTGGTGTACAATTATTTAATTTATTTAGCTATTTAAGGATATACATAAACCTAAAAACTAATACGGTAATCGTTTCATCCTTACCTTCATAAGCTCACTAGCCAAAAATTTTGATTTAAATCAATTTGATGTTTATTTTAGCATGCACTTTTTTATATGTATTTTGAATGTTTTTATTTTAATTTTTGAGAAATATTTTGGATGTTTTTTTATTTGGTTAAATACTATGATTTCTACTATTTTATGAGTTTCTTTAAAAAAAAAGGATCATAGTTTTATTTCAATTGTGATGTTTTTTATTGTCTTTTTATAATTAAAGTGCGGGTAATGGGTACGGGTATGGGCACTTAGGTGCCCACAGGGTATGGGGAAGGGCACTAAAGTTGTTACCCACGAGGGTATGGGCTCGGGTATGGGCATTTTTTACAAACGCGGGTATGGGGATGGGTACTGTACTACCCTACCCATTGGATACCCATTGCCATCCCTAGTCACTCTAAGAAGATGATAAAAAAGCATATTACGTGTCATTTTATCTTTTCAATGTAACTTTAATTTTTGATTTCAATTTTACCCGTCTTTACCGTGCATTTATAACAATGACCAATACTCCATTAATTATGAGGACAATTTAGTAAGTTTTATCCACTTATCAAGTCTTTTGTTGCTTTTCTTAAACCTTGTGGAAAACCTTAAACGACACTCAATTTGAAATGGAAGGTGTATCTAACAAAGGGAGTTACCTTACAATATTCTCTCCCTAAACATTCACCTTGTCCTCAAGCTGAACAGCTTGTAGTTGCTTAAAACAAAACCCTGTTAGGGTCCCACTGTTTGAAATATTATAACCATGATACAAATGAAAGACAATACCCTGCCTCTAAGATCAAGAGTTCAAATTGCCATAGTTGATTGTAGAATTTGATGCTATCCTTAATAGCTGATTTTCATGATGATTTTGATCCCTTTGGAGAAATATATTTTGGTAAAACATCTTTGTAGAGATTGTATCTTAGAGAAATATATGTTAGTAGTAACTAATATGCATCTTGATGACGACATAAAACATGAAACCAAAAAATATCAAGTTATTTTGTCCAGTTGATTGTGCAGTATTGTAATTTTTTAGCCACTGTTTCAGCTGTCATCATCCTGTCTTTCCTTGCCCATCTTTTAACATGTTGTTTCAATCAATCTAACACAACTTGGTTTCACTTACCAGATGGGGTCAAGTTTTTATACTGGACGCTCTTTCTAGATACAAGGCTGCTGATGCACGTGAGGCAGAAAACATTGTAGAAAGAGTTACCCCACGGTTACAGCATGCCAATTGTGCAGTTGTACTGTCGGCTGTTAAGGTGATTCTACTGCCCTTACGTGTAACTTATTATCTTGCAGACCATTTGTCAATATTAATGCATCGGTAATCACTAATCACATTCTGCCTGGTGTGCTAACCACAATTTATAATGACATGTAGATGATCCTTCAACAAATGGAACTCATCACCAGCACTGATGTGGTCCGGAATCTTTGCAAAAAGATGGCTCCTCCTCTTGTGACATTACTCTCAGCAGAACCTGAGATACAATATGTTGCCCTGCGAAATATCAATCTTATTGTACAAAGAAGGCCGACAATTCTTGCACATGAAATTAAGGTATTTGATCTAAATTTTATTGTGAACTTGTCACTTAGTTATAAACAAACTAGGTCACCGGATTATGGGCCTCTTTTATTTTAGACGCCAAATGATTATGGGCCTCCTGTTCTATATGTAGGTGTTCTTCTGCAAATACAATGATCCTATATATGTGAAAATGGAGAAATTAGAAATCATGATAAAACTTGCTTCAGACCGAAATATAGACCAGGTAAGCTTTTACATTATACAGCTTTCAGTTCAATAATTTCCTTCCCTCCCCATTTTTTTATTTTTTTTGTGAATAAAAAATAATTTTGTTTTGTTAAAAGTGAGCTCCAGTGATTTTAGTGAACACTACACACTATGAAATGAATTGGTAGATCGATTGAAACAACTGAAAATAAGTGAACATTTTTATTGAATGATCAAAAAAAGAAGAGAGGCTTTCCAACAAGGGTTTCCTTTCACAAAGGATTTCTGCATTCACACAAACTTTCTAATTCACATAATGAATATAATTTACTATTTTTCTCTAATGAGTCTCCCCTATCTAGTGAAGTTCCCTTACTAATTCTAACTATAACTCCCCTTATTCATTATCCTAACAGGCTCACCTTTCTTTTATTAATTTGACACAGAACTGCTGTTTACTATGTGCATACATATTTAATATTTAATTTGCCAGAACAATTTTTCTCATGAAACTTTAAATCGTTGCAGCTATTCTATAAACAATTTTTCTCACCTTTTTTTTGACCCATTGGTTACAACATTGGCAGGTTTTGTTGGAATTTAAGGAGTATGCTACTGAAGTTGACGTAGATTTTGTTAGAAAGGCTGTTCGTGCAATTGGTCGTTGTGCCATTAAATTAGAGAGAGCAGCTGAAAGATGCATTAGTGTTTTGCTAGAGCTGATCAAGATAAAAGTAAATTATGTGGTTCAAGAGGCAATCATTGTTATCAAAGACATATTTAGACGATACCCCAACACGTATTGTTTTCTTTCCTCATCTTTTTTTTTTTTTGGGAGGTGGGGGATAGAGAAGTTGGTGATTAAGCATTACTTGAAACTTTATTTGAAAATTTGTTTCATTTTGCAGATATGAGTCCATAATTGCAACTCTTTGTGAGAGCTTAGACACCTTGGATGAGCCCGAAGCCAAGGTATATGTTGTCTGAGTGCTTTTGTAATTGACAGTTTTCATCAGCATGCTTATACCTTTTCATCCACTTTCCTATCTGGACAGGCATCAATGATCTGGATAATTGGTGAATATGCGGAAAGAATTGACAATGCTGACGAGCTTCTTGAAAGTTTCTTGGAAAGTTTCCCCGAAGAACCTGCGCTAGTCCAACTACAATTGCTGACAGCTACTGTTAAACTTTTCCTTAAGAAGCCAACTGAGGGCCCACAGCAGATGATTCAGGTCCTTCCTCATAACACATTTGTTCAAATGCATTGCTTTAATGTTTTTTTAATTCCAAATGGATATCAAATGCGTGACTCGTTTTAATGTCCTCAGAATCCTGTTCATAAATTATAGATAAATTAGCTTGAAGATATAGCAATATTTTTCTACCGAAATCTAGTAGGACAACCCTTTCACTAAGTATGTAAATCCGTGCAGTCCTTTCCCTCTTTCTTCAAGTGGTCTATATAAGCAACTTCTCTTTTTACTATCAATTGTTGTATATCTTAAATTAAACAACTGTGTGCGTTCACCATTATTGGTTTTACAAATCTTTGATAAATATTTTTTCAAAGTGAAAGATAGAAAACCTAGCAAATTTGAGCTTATATCTGGAACAATTCCTAAAATTATTGGAACCAAAACTGAAAGACAAATTTTCCGTCCTTTGCTATCTATTTGTTTATAGAGCCTTCTTTATATTGTTTCATAAAATTATCTATAGCCGTTTAATTTACATTCTTTAAATCCTTCGATGTTAGTTTCACTCTAGCTAATCTTTACAGGTTGTTTTGAACAATGCGACTATGGAGACAGATAATCCTGATTTGCGAGATCGTGCATACATATATTGGCGTCTCCTCTCAACTGACCCTGAGGTTTGATTTCTTGAATTGAAATCCAGTTTCTTCAGTTCAATATGTAGCTAATTAGTTGAGGTGGATACCTGGCTGTAGATTGTATACCTAAACTGAATTTATCAATTTAACTCTTTACAGAGAAGTTTTTAATATGTTTTATCATTCTCTTTAAAGTATAAGGTACAATACACTTAATATGATTGATCATTTGTCTAGCCACATGGAAATAACAACTTTCTCTCAGAAATTGTGTGTTAGAAACAAATTTTGTCCCTCCCTTTGATGTACCTAGCTTGTCTTCTCCAGGCAGCTAAGGATGTCGTGTTAGCTGAGAAGCCTGTGATAACTGATGACTCAAACAACCTCGATCCTTCTCTACTTGACGAGCTTCTAGTCAATATTGCTACATTATCTTCCGTTTATCACAAGCCCCCTGAAGCATTTGTTACCCGCACACTTGCTTCGGCCCAGAAAACTGAAGATGATGACTATCCTGATGGAAGTGAATCCGAGTCATCTGTAAATCCTGCTAATGGCCCTGGGTCACCTCCTACTTCCAGCTATACAATACCTGCATCTGTGGCACCAGCTTCACCTCCACCTTCTGCTGCACCAGTGCCAGATTTACTTGGTGATTTGATGGGCATGGATAATAGTTCTATTGTTCCTCTTGACCAGCCAGCTGCTCCTTCAGGGTGAGTAAAATTAAGTATTGTGGGTTACTTTTAAAATGGCTTACTGCTATCTGTTATGCATTTTAGAAGAGTTGCATATGATTTGTCATGCGATAAAAAAAGAGAATGGTTAAATATGTTTTTTAAGTCCCCCTAAAACTTGGTTTAAGTCCCTCATTGAAAAATTGGTGTCTTTTTGTCCCGCAACTTTTGAAATATATTGTTCATGGTCTTTGTATGGCGTTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAACTAAAACACAACTTCAGGGACAAAATATATTGTTCATGGTCTTTGTATGGGGTTAAAGGGGCGGGGGACTAAAACACAACTTCAGGGACAAAAATTGACATTTCAAAAGTTGGGCAGTGAAAACACGTTACTTTTTAGTTGGGGAGGGGGCATGTCATCTGTGGTCCTTGTGGTAGAAATCAAAGGGGCGGGGGTACTGAAACCCAATTTCAGGGATAAAAAATTGTCATATTTCTAAAATTGGGGGTCGGAAACACGTTACTTTTCAAAGGCAAGATTGAAACAAGTTTTGAGAATTTCTAGGGGACAATAGTATTTAACCAAAAAGATTTTTATTTTTTTTTTGTATTGAATTGTGATTGATGATAATATGTGAGTTTTTTTTATTGACATGAATAATATGTGATGTTGTAATTTGTTAATAAATATTAAAACATGTTCACATGACTTTGGGATGGCCTATCAACACATATAATTGTTGAGCAATTTCTGAAAGCTTCATTACCTTGCAATTTACATAATAATGCTTGATTATATCCTCCTCTGTCCTGATTGCAGGCCTCCTTTGCCCGTTGTACTGCCTGCTTCAACTGGTCAGGGTTTACAAATCAGTGCACAGCTTACTAGGCGGGATGGTCAAGTATTCTACAATATGTTATTTGAGAACAATTCTCAAGTTCCACTTGATGGATTCATGATCCAATTTAACAAGAACACATTTGGTCTTGCAGCTGCTGGGCCCCTGCAGGTTAATATTGCATACAATGGCTTTTTACTTGAATATTTTGATAGAAATTCAGTTCTACTAATAGATGGCTTATTGCTTTTCAGGTTCCACAATTGCAACCTGGAACATCAGCTAGGACACTCCTTCCTATGGTTATGTTCCAGAACATGTCCCAAGGTCCGCCTAGCTCAGTTTTACAGGTTGCCTTAAAAAACAACCAACAGCCTGTGTGGTATTTCAACGATAAAATCTTATTCCAAGCATTTTTTACCGAGGATGGTAGAATGGAGCGTGCCGCTTTCCTTGAGGTATATACCTTTCCATTCATTTGA

Protein sequence

>MS.gene28922.t1

MSRNDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKVKARMTILLSDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVANAVAALAEIQDNSTRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPALVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATMETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNNLDPSLLDELLVNIATLSSVYHKPPEAFVTRTLASAQKTEDDDYPDGSESESSVNPANGPGSPPTSSYTIPASVAPASPPPSAAPVPDLLGDLMGMDNSSIVPLDQPAAPSGPPLPVVLPASTGQGLQISAQLTRRDGQVFYNMLFENNSQVPLDGFMIQFNKNTFGLAAAGPLQVPQLQPGTSARTLLPMVMFQNMSQGPPSSVLQVALKNNQQPVWYFNDKILFQAFFTEDGRMERAAFLEVYTFPFI