Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009829.t1 | XP_003615711.1 | 99.6 | 557 | 2 | 0 | 3 | 559 | 28 | 584 | 0.00E+00 | 1157.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009829.t1 | P19252 | 94.8 | 556 | 28 | 1 | 3 | 558 | 28 | 582 | 0.0e+00 | 1103.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009829.t1 | G7JZK0 | 99.6 | 557 | 2 | 0 | 3 | 559 | 28 | 584 | 0.0e+00 | 1157.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009829 | MS.gene41176 | PPI |
| MS.gene79217 | MS.gene009829 | PPI |
| MS.gene009829 | MS.gene052122 | PPI |
| MS.gene009829 | MS.gene45489 | PPI |
| MS.gene009829 | MS.gene004045 | PPI |
| MS.gene009829 | MS.gene052207 | PPI |
| MS.gene009829 | MS.gene071169 | PPI |
| MS.gene009829 | MS.gene75475 | PPI |
| MS.gene009829 | MS.gene30955 | PPI |
| MS.gene009829 | MS.gene045117 | PPI |
| MS.gene021114 | MS.gene009829 | PPI |
| MS.gene009829 | MS.gene31156 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009829.t1 | MTR_5g071360 | 99.641 | 557 | 2 | 0 | 3 | 559 | 28 | 584 | 0.0 | 1160 |
| MS.gene009829.t1 | MTR_5g071360 | 99.586 | 483 | 2 | 0 | 3 | 485 | 28 | 510 | 0.0 | 1012 |
| MS.gene009829.t1 | MTR_3g464580 | 86.225 | 559 | 75 | 2 | 3 | 559 | 28 | 586 | 0.0 | 1011 |
| MS.gene009829.t1 | MTR_3g087220 | 78.450 | 529 | 114 | 0 | 3 | 531 | 28 | 556 | 0.0 | 900 |
| MS.gene009829.t1 | MTR_3g464580 | 87.759 | 482 | 58 | 1 | 3 | 483 | 28 | 509 | 0.0 | 898 |
| MS.gene009829.t1 | MTR_3g464580 | 87.411 | 421 | 51 | 2 | 3 | 422 | 28 | 447 | 0.0 | 776 |
| MS.gene009829.t1 | MTR_5g069310 | 93.662 | 142 | 9 | 0 | 418 | 559 | 2 | 143 | 2.86e-93 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009829.t1 | AT3G47340 | 83.060 | 549 | 86 | 1 | 2 | 550 | 27 | 568 | 0.0 | 974 |
| MS.gene009829.t1 | AT5G10240 | 79.190 | 543 | 113 | 0 | 3 | 545 | 28 | 570 | 0.0 | 929 |
| MS.gene009829.t1 | AT5G10240 | 78.637 | 543 | 115 | 1 | 3 | 545 | 28 | 569 | 0.0 | 918 |
| MS.gene009829.t1 | AT5G65010 | 80.115 | 523 | 104 | 0 | 3 | 525 | 28 | 550 | 0.0 | 912 |
| MS.gene009829.t1 | AT5G65010 | 80.153 | 524 | 103 | 1 | 3 | 525 | 28 | 551 | 0.0 | 910 |
| MS.gene009829.t1 | AT3G47340 | 85.447 | 481 | 70 | 0 | 3 | 483 | 28 | 508 | 0.0 | 885 |
| MS.gene009829.t1 | AT3G47340 | 85.166 | 391 | 58 | 0 | 2 | 392 | 27 | 417 | 0.0 | 720 |
| MS.gene009829.t1 | AT3G47340 | 86.711 | 301 | 40 | 0 | 92 | 392 | 2 | 302 | 0.0 | 562 |
Find 141 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGCAAAAGTTGATTTAT+TGG | 0.146655 | 5.3:+56631165 | None:intergenic |
| GCCATAGTTGATCCTGCTTC+TGG | 0.190792 | 5.3:-56633562 | MS.gene009829:CDS |
| TAGTATGCTTCCTTGGTGTT+TGG | 0.294339 | 5.3:+56630500 | None:intergenic |
| CTTGGTGTTTGGGGTGTTGT+GGG | 0.299374 | 5.3:+56630511 | None:intergenic |
| AGTATGCTTCCTTGGTGTTT+GGG | 0.315403 | 5.3:+56630501 | None:intergenic |
| TGGTGAAACTCTTCCTTGTT+TGG | 0.317778 | 5.3:+56631327 | None:intergenic |
| CCAATCCCCAACCAATGTAT+AGG | 0.322005 | 5.3:+56632787 | None:intergenic |
| CTGTTGAGTGGGATGCTTCT+TGG | 0.325762 | 5.3:-56630097 | MS.gene009829:CDS |
| TCCCCATTGCTCAGCAGCTT+TGG | 0.326885 | 5.3:+56632021 | None:intergenic |
| CCTTGGTGTTTGGGGTGTTG+TGG | 0.329281 | 5.3:+56630510 | None:intergenic |
| AGAAGCCAGAGTTCCATTCT+TGG | 0.330224 | 5.3:-56631137 | MS.gene009829:CDS |
| TGGCTCTCTGGCAATCATAT+TGG | 0.332558 | 5.3:+56631185 | None:intergenic |
| TGAGTTTACCTTTACTGTTC+AGG | 0.336514 | 5.3:-56631791 | MS.gene009829:intron |
| GAAGGATCTGATGAGATATT+TGG | 0.338455 | 5.3:-56631375 | MS.gene009829:CDS |
| CCTATACATTGGTTGGGGAT+TGG | 0.339541 | 5.3:-56632787 | MS.gene009829:CDS |
| GCTGCTTCCTGAGAGCTTCA+TGG | 0.346516 | 5.3:+56633072 | None:intergenic |
| GTTGGTTATAGTTGGATTGA+TGG | 0.352635 | 5.3:-56630699 | MS.gene009829:CDS |
| CTCTGAATGGCAACCTCAAC+AGG | 0.354874 | 5.3:+56629951 | None:intergenic |
| CTTGATTAGTATGAGGAATA+TGG | 0.356630 | 5.3:-56632912 | MS.gene009829:intron |
| TGACCTTGCGGCATGTTTCT+TGG | 0.358607 | 5.3:+56631307 | None:intergenic |
| ACCTGAAGGATCAAGGTTCT+TGG | 0.360091 | 5.3:+56630073 | None:intergenic |
| TCAGCAAGGCTAACTGTTCC+TGG | 0.360471 | 5.3:-56630152 | MS.gene009829:CDS |
| CCAGTTTGAAATGGAATTAT+CGG | 0.364832 | 5.3:-56634059 | None:intergenic |
| CCATAGTTGATCCTGCTTCT+GGG | 0.367703 | 5.3:-56633561 | MS.gene009829:CDS |
| CACCAAAGCTGCTGAGCAAT+GGG | 0.378159 | 5.3:-56632023 | MS.gene009829:CDS |
| CTTATGATCCTCTAGCTTTG+AGG | 0.378272 | 5.3:-56632518 | MS.gene009829:CDS |
| TGTTCTACTATCTGGAGGTT+TGG | 0.381315 | 5.3:-56632089 | MS.gene009829:CDS |
| TCCAAGAACCTTGATCCTTC+AGG | 0.384997 | 5.3:-56630074 | MS.gene009829:CDS |
| TGGTGGAGCCCACTCCAGTC+AGG | 0.386539 | 5.3:+56633619 | None:intergenic |
| TTGATGACTGATGTGCCTTT+TGG | 0.392532 | 5.3:-56632112 | MS.gene009829:CDS |
| GTCTGGATTCAGGTTCTGTT+TGG | 0.394150 | 5.3:-56632683 | MS.gene009829:intron |
| CTTTGAGAGGTTCTTCCCTC+AGG | 0.394486 | 5.3:-56630465 | MS.gene009829:intron |
| AACTTCCCTATACATTGGTT+GGG | 0.395146 | 5.3:-56632793 | MS.gene009829:CDS |
| TTAAATCACTTGGTGTCAAA+TGG | 0.396039 | 5.3:-56631410 | MS.gene009829:CDS |
| CCATTGCTCAGCAGCTTTGG+TGG | 0.397285 | 5.3:+56632024 | None:intergenic |
| TATTGATCCCGAGAACAAAA+TGG | 0.398992 | 5.3:-56631086 | MS.gene009829:intron |
| TGGAGGTTTGGACTCATCAT+TGG | 0.403230 | 5.3:-56632077 | MS.gene009829:CDS |
| CTTAGTACCTTTGGCAGGTA+AGG | 0.415335 | 5.3:+56630837 | None:intergenic |
| AAGTTGATTTATTGGCTCTC+TGG | 0.421158 | 5.3:+56631173 | None:intergenic |
| GTGATGGTGTTGGTTATAGT+TGG | 0.421617 | 5.3:-56630707 | MS.gene009829:CDS |
| CAGCAGCTTTGGTGGTTGCT+AGG | 0.422326 | 5.3:+56632032 | None:intergenic |
| TCTGTAGTAGTATGCTTCCT+TGG | 0.425516 | 5.3:+56630493 | None:intergenic |
| CAATCCCCAACCAATGTATA+GGG | 0.426353 | 5.3:+56632788 | None:intergenic |
| TGAAGCACCGTGGCCCTGAC+TGG | 0.426940 | 5.3:-56633633 | MS.gene009829:intron |
| CCCAGAAGCAGGATCAACTA+TGG | 0.430437 | 5.3:+56633561 | None:intergenic |
| TCCAGTTCGGAATGTGTGAT+TGG | 0.438995 | 5.3:+56633046 | None:intergenic |
| GTAGGGCTCGCCTGATCTTA+AGG | 0.439940 | 5.3:-56631854 | MS.gene009829:intron |
| ATAAACTCCTTGTCCAAGAA+TGG | 0.445681 | 5.3:+56631124 | None:intergenic |
| CTCATTCTGTGTTGGACTTG+AGG | 0.467729 | 5.3:-56631987 | MS.gene009829:intron |
| GGAATATGGCGAAGACTTTG+TGG | 0.468334 | 5.3:-56632898 | MS.gene009829:CDS |
| CATGCAACAGTTGGTCCTCC+AGG | 0.472328 | 5.3:+56630134 | None:intergenic |
| TAACTTCCCTATACATTGGT+TGG | 0.473236 | 5.3:-56632794 | MS.gene009829:CDS |
| ATTTGAGAAGATTATACCAT+TGG | 0.476016 | 5.3:-56629982 | MS.gene009829:CDS |
| TCCAATCACACATTCCGAAC+TGG | 0.478845 | 5.3:-56633047 | MS.gene009829:CDS |
| TAAATCACTTGGTGTCAAAT+GGG | 0.481025 | 5.3:-56631409 | MS.gene009829:CDS |
| ATTGGAAGCTTCTCCTGTTG+AGG | 0.481461 | 5.3:-56629964 | MS.gene009829:CDS |
| CTCAAAGCTAGAGGATCATA+AGG | 0.487494 | 5.3:+56632519 | None:intergenic |
| ATAGTGGCTAGAGATGCTAT+TGG | 0.494639 | 5.3:-56632819 | MS.gene009829:CDS |
| GGCTCGCCTGATCTTAAGGC+TGG | 0.495183 | 5.3:-56631850 | MS.gene009829:CDS |
| AATTACTTAGTACCTTTGGC+AGG | 0.501660 | 5.3:+56630832 | None:intergenic |
| AGAGGTTGATCCCCAGAAGC+AGG | 0.502947 | 5.3:+56633550 | None:intergenic |
| TTTACAACCATGAAGCTCTC+AGG | 0.505927 | 5.3:-56633079 | MS.gene009829:CDS |
| AAACTACACTCATTCTGTGT+TGG | 0.506077 | 5.3:-56631995 | MS.gene009829:CDS |
| CACCGTGGCCCTGACTGGAG+TGG | 0.507750 | 5.3:-56633628 | MS.gene009829:CDS |
| CCACCAAAGCTGCTGAGCAA+TGG | 0.508023 | 5.3:-56632024 | MS.gene009829:CDS |
| ACCGTGGCCCTGACTGGAGT+GGG | 0.511159 | 5.3:-56633627 | MS.gene009829:CDS |
| AAGATGGTGGATTTCGAAGA+TGG | 0.512006 | 5.3:-56632581 | MS.gene009829:CDS |
| CATCACAATCACTTCCAGTT+CGG | 0.516313 | 5.3:+56633033 | None:intergenic |
| CATAGTTGATCCTGCTTCTG+GGG | 0.518463 | 5.3:-56633560 | MS.gene009829:CDS |
| CACCTATGTTTCTTATGTCA+AGG | 0.519137 | 5.3:-56631437 | MS.gene009829:CDS |
| TGGTGTTTGGGGTGTTGTGG+GGG | 0.523651 | 5.3:+56630513 | None:intergenic |
| CTGCTCTACCTGAAGGATCA+AGG | 0.523757 | 5.3:+56630066 | None:intergenic |
| AGAGGATCATAAGGAGCTGA+TGG | 0.524528 | 5.3:+56632528 | None:intergenic |
| GATTACAGGCAGTGATAAAG+AGG | 0.524836 | 5.3:-56632135 | MS.gene009829:intron |
| GGTGGAGCCCACTCCAGTCA+GGG | 0.525107 | 5.3:+56633620 | None:intergenic |
| TACATTGGTTGGGGATTGGA+TGG | 0.526541 | 5.3:-56632783 | MS.gene009829:intron |
| AGCAGTTACCTGAACAGTAA+AGG | 0.527338 | 5.3:+56631783 | None:intergenic |
| CATTTGTACTCTAGCAAAGA+TGG | 0.527462 | 5.3:-56632597 | MS.gene009829:CDS |
| GAAGATGGTACAATCCTCCT+TGG | 0.531078 | 5.3:-56632566 | MS.gene009829:CDS |
| ACTTCCCTATACATTGGTTG+GGG | 0.533129 | 5.3:-56632792 | MS.gene009829:CDS |
| CTTGTCCAAGAATGGAACTC+TGG | 0.535205 | 5.3:+56631132 | None:intergenic |
| CGAAGACTTTGTGGACAAGT+TGG | 0.538479 | 5.3:-56632889 | MS.gene009829:CDS |
| TTGTGATGTTATTGCACACT+TGG | 0.539309 | 5.3:-56633018 | MS.gene009829:intron |
| CCAGATAGTAGAACACCAAA+AGG | 0.540119 | 5.3:+56632097 | None:intergenic |
| GCCCACTCCAGTCAGGGCCA+CGG | 0.540446 | 5.3:+56633626 | None:intergenic |
| AAAAGCAGTCACCATGTTGG+TGG | 0.543353 | 5.3:+56633602 | None:intergenic |
| TTTGGTGTTCTACTATCTGG+AGG | 0.543498 | 5.3:-56632094 | MS.gene009829:CDS |
| CAGCTCAAACTAGCTCTGAA+TGG | 0.544212 | 5.3:+56629938 | None:intergenic |
| GGAGTAACTTCCCTATACAT+TGG | 0.550845 | 5.3:-56632798 | MS.gene009829:CDS |
| CAGAGTTCCATTCTTGGACA+AGG | 0.551331 | 5.3:-56631131 | MS.gene009829:CDS |
| TTGGTGTTTGGGGTGTTGTG+GGG | 0.552196 | 5.3:+56630512 | None:intergenic |
| CACAGCAAAAGCTGTTGAGT+GGG | 0.555110 | 5.3:-56630108 | MS.gene009829:CDS |
| ACTCATGGTGAACAGTTCCT+AGG | 0.556585 | 5.3:+56631809 | None:intergenic |
| GCTGTGCTGCATGCAACAGT+TGG | 0.559213 | 5.3:+56630125 | None:intergenic |
| GACTTTGTGGACAAGTTGGA+TGG | 0.567027 | 5.3:-56632885 | MS.gene009829:CDS |
| TTCCTTGACATAAGAAACAT+AGG | 0.569230 | 5.3:+56631435 | None:intergenic |
| AGGATTCTCTTCATCATCAA+AGG | 0.569332 | 5.3:+56630857 | None:intergenic |
| TTTGAGGCATGCCTTTGAGA+AGG | 0.570418 | 5.3:-56632502 | MS.gene009829:intron |
| GGTGTCAAATGGGTAATCTC+TGG | 0.572109 | 5.3:-56631399 | MS.gene009829:CDS |
| GAACAATTCAGTGATGGTGT+TGG | 0.577943 | 5.3:-56630717 | MS.gene009829:CDS |
| GTATGCTTCCTTGGTGTTTG+GGG | 0.580346 | 5.3:+56630502 | None:intergenic |
| TATGAATCATACCTTCTCAA+AGG | 0.580405 | 5.3:+56632491 | None:intergenic |
| CTTTCACAAAGCACCAAACA+AGG | 0.587961 | 5.3:-56631340 | MS.gene009829:CDS |
| GATAGGATGATGCTTAATGC+TGG | 0.589317 | 5.3:-56630545 | MS.gene009829:CDS |
| AAATGGGTAATCTCTGGTGA+AGG | 0.594753 | 5.3:-56631393 | MS.gene009829:CDS |
| GCACAGCAAAAGCTGTTGAG+TGG | 0.598571 | 5.3:-56630109 | MS.gene009829:CDS |
| GGATGGTATAGATGCAATTG+AGG | 0.599373 | 5.3:-56631511 | MS.gene009829:CDS |
| TGAGAAGTATATTCTGAGGA+AGG | 0.602559 | 5.3:-56630880 | MS.gene009829:CDS |
| CCTTCAGGTAGAGCAGCACT+TGG | 0.604084 | 5.3:-56630059 | MS.gene009829:CDS |
| GAACAGTAAAGGTAAACTCA+TGG | 0.604362 | 5.3:+56631794 | None:intergenic |
| AAAGAAGTTGCAGACTACCT+AGG | 0.604439 | 5.3:-56631826 | MS.gene009829:CDS |
| TCGTGATAACAGTTACATAG+TGG | 0.611665 | 5.3:-56632835 | MS.gene009829:CDS |
| ACTACAGAATGATCTTTGAG+AGG | 0.611737 | 5.3:-56630478 | MS.gene009829:CDS |
| TCAAGGAAGATTAAATCACT+TGG | 0.611830 | 5.3:-56631420 | MS.gene009829:CDS |
| GGATCTGATGAGATATTTGG+TGG | 0.613587 | 5.3:-56631372 | MS.gene009829:CDS |
| TTATGAAAACCAGAAAACCT+TGG | 0.617746 | 5.3:-56630021 | MS.gene009829:CDS |
| CAGAAGGAACAATTCAGTGA+TGG | 0.617988 | 5.3:-56630723 | MS.gene009829:CDS |
| TTGTACTCTAGCAAAGATGG+TGG | 0.620516 | 5.3:-56632594 | MS.gene009829:CDS |
| AGGTGTGCTTGCTCTAATTG+TGG | 0.620797 | 5.3:+56631455 | None:intergenic |
| CCACAACACCCCAAACACCA+AGG | 0.622582 | 5.3:-56630510 | MS.gene009829:CDS |
| GATTTGTCTTCATTAAAGAG+AGG | 0.625391 | 5.3:+56633532 | None:intergenic |
| TTGCTAGAGTACAAATGACC+AGG | 0.627197 | 5.3:+56632603 | None:intergenic |
| CCAAGTGCTGCTCTACCTGA+AGG | 0.631267 | 5.3:+56630059 | None:intergenic |
| AGAGAATCCTTACCTGCCAA+AGG | 0.637793 | 5.3:-56630844 | MS.gene009829:intron |
| AAGGCATGCCTCAAAGCTAG+AGG | 0.643083 | 5.3:+56632510 | None:intergenic |
| ACGAGTATCCAATAGAACAA+AGG | 0.647672 | 5.3:+56632854 | None:intergenic |
| GATCAACTATGGCTAACCGT+TGG | 0.653817 | 5.3:+56633572 | None:intergenic |
| AGACAAATCTGTCATTGTCA+CGG | 0.657965 | 5.3:-56633518 | MS.gene009829:intron |
| CAATCCTCCTTGGTACTCTG+AGG | 0.659380 | 5.3:-56632556 | MS.gene009829:CDS |
| TCACCAAGAAACATGCCGCA+AGG | 0.661739 | 5.3:-56631310 | MS.gene009829:intron |
| GAATTGAGAAGTATATTCTG+AGG | 0.663370 | 5.3:-56630884 | MS.gene009829:CDS |
| CTAGAGTACAAATGACCAGG+TGG | 0.679392 | 5.3:+56632606 | None:intergenic |
| TCAACAGGAGAAGCTTCCAA+TGG | 0.679614 | 5.3:+56629966 | None:intergenic |
| TAGAGTACAAATGACCAGGT+GGG | 0.692112 | 5.3:+56632607 | None:intergenic |
| TGGAGTGGGCTCCACCAACA+TGG | 0.697527 | 5.3:-56633613 | MS.gene009829:CDS |
| GGAATAGCCTCAGAGTACCA+AGG | 0.698225 | 5.3:+56632549 | None:intergenic |
| TCACATCATAAGTTTCAACA+TGG | 0.707488 | 5.3:+56631478 | None:intergenic |
| ACCAAAGCTGCTGAGCAATG+GGG | 0.728934 | 5.3:-56632022 | MS.gene009829:CDS |
| GCAAGGCTAACTGTTCCTGG+AGG | 0.745250 | 5.3:-56630149 | MS.gene009829:CDS |
| CGTAACAGATTGAAGCACCG+TGG | 0.776414 | 5.3:-56633643 | MS.gene009829:intron |
| ATAGCCTCAGAGTACCAAGG+AGG | 0.789643 | 5.3:+56632552 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCCATAAATTAAATTATA+AGG | + | chr5.3:56631259-56631278 | None:intergenic | 10.0% |
| !! | ATTATGAAATCAATAATATA+TGG | - | chr5.3:56632448-56632467 | MS.gene009829:intron | 10.0% |
| !!! | TTACCTTATAATTTAATTTA+TGG | - | chr5.3:56631253-56631272 | MS.gene009829:intron | 10.0% |
| !! | AATATAATCATATATGTCAA+TGG | + | chr5.3:56633664-56633683 | None:intergenic | 15.0% |
| !! | GTAATTTATAAAAAAATAGG+TGG | - | chr5.3:56630236-56630255 | MS.gene009829:intron | 15.0% |
| !! | TAACATAATCATTATTGTTA+CGG | + | chr5.3:56630856-56630875 | None:intergenic | 15.0% |
| !! | TTATCAAAAACAAAATATTG+AGG | + | chr5.3:56630122-56630141 | None:intergenic | 15.0% |
| !! | TTTAGTATATGTCATATAAA+TGG | + | chr5.3:56630508-56630527 | None:intergenic | 15.0% |
| !!! | AAAAACAACTATTTTGTTTT+CGG | + | chr5.3:56632985-56633004 | None:intergenic | 15.0% |
| !!! | AAGTTTATGTTACTTATAAT+TGG | - | chr5.3:56633402-56633421 | MS.gene009829:intron | 15.0% |
| !!! | ACTATTTTATCTTACAATTA+GGG | - | chr5.3:56632401-56632420 | MS.gene009829:intron | 15.0% |
| !!! | ATTGATTATTGATTATTTGT+TGG | - | chr5.3:56630326-56630345 | MS.gene009829:intron | 15.0% |
| !!! | CTATTTTCTTAAATTATTAC+CGG | - | chr5.3:56633693-56633712 | MS.gene009829:intron | 15.0% |
| !!! | CTTTGATTTAATAATTTGTT+CGG | - | chr5.3:56631009-56631028 | MS.gene009829:intron | 15.0% |
| !!! | TACTATTTTATCTTACAATT+AGG | - | chr5.3:56632400-56632419 | MS.gene009829:intron | 15.0% |
| !!! | TGTTTTTGATAAACTAATAT+TGG | - | chr5.3:56630130-56630149 | MS.gene009829:CDS | 15.0% |
| !! | AAAACAAAATATTGAGGTTA+TGG | + | chr5.3:56630116-56630135 | None:intergenic | 20.0% |
| !! | ATTGAACAACAAAGATTAAA+AGG | - | chr5.3:56630006-56630025 | MS.gene009829:CDS | 20.0% |
| !! | TTATTGAAAAATCAGGTAAA+TGG | - | chr5.3:56630889-56630908 | MS.gene009829:CDS | 20.0% |
| !! | TTCATGCAATTATATTCATA+TGG | - | chr5.3:56630733-56630752 | MS.gene009829:CDS | 20.0% |
| !! | TTTGTCATTATTGAAAAATC+AGG | - | chr5.3:56630882-56630901 | MS.gene009829:CDS | 20.0% |
| !!! | ATTATCGGTAAATTTTTTAG+TGG | - | chr5.3:56629952-56629971 | MS.gene009829:CDS | 20.0% |
| !!! | CTAATTTTAATATGCAAAAC+TGG | - | chr5.3:56630764-56630783 | MS.gene009829:intron | 20.0% |
| !!! | TCTATTGATTTATGCAAAAT+TGG | - | chr5.3:56633197-56633216 | MS.gene009829:intron | 20.0% |
| !!! | TTATCGGTAAATTTTTTAGT+GGG | - | chr5.3:56629953-56629972 | MS.gene009829:CDS | 20.0% |
| ! | AAATTGTAGAGTTAAAAGGT+TGG | + | chr5.3:56633357-56633376 | None:intergenic | 25.0% |
| ! | AAGACGACATAATTTAACAA+GGG | - | chr5.3:56633780-56633799 | MS.gene009829:intron | 25.0% |
| ! | AATATTAAGACCGACATTAA+AGG | + | chr5.3:56632105-56632124 | None:intergenic | 25.0% |
| ! | AATGATTTAATCGGTTGAAT+TGG | - | chr5.3:56632300-56632319 | MS.gene009829:intron | 25.0% |
| ! | AGTTTCCAATCAAAACAAAA+TGG | + | chr5.3:56631810-56631829 | None:intergenic | 25.0% |
| ! | ATTCAGACACATTAAACTAA+AGG | + | chr5.3:56630295-56630314 | None:intergenic | 25.0% |
| ! | ATTTGAGAAGATTATACCAT+TGG | - | chr5.3:56634014-56634033 | MS.gene009829:intron | 25.0% |
| ! | CATGGTTCAAATGATTTAAT+CGG | - | chr5.3:56632291-56632310 | MS.gene009829:intron | 25.0% |
| ! | CTAGAACAGATAAAATGTAT+TGG | - | chr5.3:56631688-56631707 | MS.gene009829:intron | 25.0% |
| ! | GTTTCCAATCAAAACAAAAT+GGG | + | chr5.3:56631809-56631828 | None:intergenic | 25.0% |
| ! | TAAGACGACATAATTTAACA+AGG | - | chr5.3:56633779-56633798 | MS.gene009829:intron | 25.0% |
| ! | TAGTTTAATGTGTCTGAATA+TGG | - | chr5.3:56630296-56630315 | MS.gene009829:intron | 25.0% |
| ! | TGAAAAAAGACCTTTAATGT+CGG | - | chr5.3:56632092-56632111 | MS.gene009829:CDS | 25.0% |
| ! | TGTTAAATTATGTCGTCTTA+TGG | + | chr5.3:56633779-56633798 | None:intergenic | 25.0% |
| ! | TGTTAATCTTGATTAGTATG+AGG | - | chr5.3:56631077-56631096 | MS.gene009829:intron | 25.0% |
| ! | TTAATGTCGGTCTTAATATT+TGG | - | chr5.3:56632105-56632124 | MS.gene009829:CDS | 25.0% |
| ! | TTCGAATAAGTATTAGCATA+AGG | + | chr5.3:56630064-56630083 | None:intergenic | 25.0% |
| !! | AATAAATCAACTTTTGCTTG+GGG | - | chr5.3:56632833-56632852 | MS.gene009829:CDS | 25.0% |
| !! | CAATAAATCAACTTTTGCTT+GGG | - | chr5.3:56632832-56632851 | MS.gene009829:CDS | 25.0% |
| !! | GTTAAATTTTACATACCTCT+TGG | - | chr5.3:56631753-56631772 | MS.gene009829:intron | 25.0% |
| !! | GTTTGTATTTGAACATGTTT+TGG | - | chr5.3:56631285-56631304 | MS.gene009829:intron | 25.0% |
| !! | TATCTTTTCCTTTGTTCTAT+TGG | - | chr5.3:56631134-56631153 | MS.gene009829:CDS | 25.0% |
| !! | TTTAGCGAAAACAATAGTTT+TGG | - | chr5.3:56631628-56631647 | MS.gene009829:intron | 25.0% |
| !! | TTTCTGAACGAAACAATTTT+TGG | - | chr5.3:56631731-56631750 | MS.gene009829:intron | 25.0% |
| !!! | ACAATAGTTTTGGTTTATGT+CGG | - | chr5.3:56631638-56631657 | MS.gene009829:intron | 25.0% |
| !!! | TATATGGCTTTATGTTATGT+AGG | - | chr5.3:56632464-56632483 | MS.gene009829:intron | 25.0% |
| !!! | TGGTATTCTAATTTTGAGTA+GGG | - | chr5.3:56632125-56632144 | MS.gene009829:CDS | 25.0% |
| !!! | TGTTGATTCAATAATTCTAC+AGG | - | chr5.3:56632954-56632973 | MS.gene009829:intron | 25.0% |
| !!! | TTGGTATTCTAATTTTGAGT+AGG | - | chr5.3:56632124-56632143 | MS.gene009829:CDS | 25.0% |
| AAATGTCTCGGTACATAATT+GGG | - | chr5.3:56631527-56631546 | MS.gene009829:intron | 30.0% | |
| AAATGTTTCCGCAAAGTAAA+CGG | - | chr5.3:56633036-56633055 | MS.gene009829:CDS | 30.0% | |
| ACTGGAATATGAATTGTACT+TGG | - | chr5.3:56630782-56630801 | MS.gene009829:intron | 30.0% | |
| AGCAAATTACTTAGTACCTT+TGG | + | chr5.3:56633171-56633190 | None:intergenic | 30.0% | |
| AGTGTTTCTTGTACAAATCT+TGG | - | chr5.3:56633005-56633024 | MS.gene009829:intron | 30.0% | |
| CACGAAATTGTAGAGTTAAA+AGG | + | chr5.3:56633361-56633380 | None:intergenic | 30.0% | |
| CATGATTTCAAATGACACAT+TGG | - | chr5.3:56631834-56631853 | MS.gene009829:CDS | 30.0% | |
| CATGTCTATGTGTATTTCAT+AGG | - | chr5.3:56630698-56630717 | MS.gene009829:CDS | 30.0% | |
| CTTGATTAGTATGAGGAATA+TGG | - | chr5.3:56631084-56631103 | MS.gene009829:intron | 30.0% | |
| GATTTGTCTTCATTAAAGAG+AGG | + | chr5.3:56630467-56630486 | None:intergenic | 30.0% | |
| GGTATGATTCATAAATGTCT+CGG | - | chr5.3:56631515-56631534 | MS.gene009829:intron | 30.0% | |
| GTCCAGATAAAAAAAGATGA+AGG | - | chr5.3:56633087-56633106 | MS.gene009829:CDS | 30.0% | |
| TAAATGTCTCGGTACATAAT+TGG | - | chr5.3:56631526-56631545 | MS.gene009829:intron | 30.0% | |
| TAAGTGCGTGTTTAGATTTA+CGG | - | chr5.3:56631563-56631582 | MS.gene009829:intron | 30.0% | |
| TATGAATCATACCTTCTCAA+AGG | + | chr5.3:56631508-56631527 | None:intergenic | 30.0% | |
| TATGTGTATTTCATAGGACA+TGG | - | chr5.3:56630704-56630723 | MS.gene009829:CDS | 30.0% | |
| TCAAGGAAGATTAAATCACT+TGG | - | chr5.3:56632576-56632595 | MS.gene009829:CDS | 30.0% | |
| TCACATCATAAGTTTCAACA+TGG | + | chr5.3:56632521-56632540 | None:intergenic | 30.0% | |
| TCATAATTCTAATGACCTTG+CGG | + | chr5.3:56632704-56632723 | None:intergenic | 30.0% | |
| TTAACTCTACAATTTCGTGA+TGG | - | chr5.3:56633362-56633381 | MS.gene009829:intron | 30.0% | |
| TTATGAAAACCAGAAAACCT+TGG | - | chr5.3:56633975-56633994 | MS.gene009829:intron | 30.0% | |
| TTCCTTGACATAAGAAACAT+AGG | + | chr5.3:56632564-56632583 | None:intergenic | 30.0% | |
| TTGTACAAATCTTGGAAAAC+AGG | - | chr5.3:56633013-56633032 | MS.gene009829:intron | 30.0% | |
| ! | ATCAATCGACTCTTCTTAAT+CGG | - | chr5.3:56633561-56633580 | MS.gene009829:CDS | 30.0% |
| ! | CATTTTATATGAGCTGAGTT+TGG | + | chr5.3:56630217-56630236 | None:intergenic | 30.0% |
| ! | CCAAGCAAAAGTTGATTTAT+TGG | + | chr5.3:56632834-56632853 | None:intergenic | 30.0% |
| ! | CCAATAAATCAACTTTTGCT+TGG | - | chr5.3:56632831-56632850 | MS.gene009829:CDS | 30.0% |
| ! | GAATTGAGAAGTATATTCTG+AGG | - | chr5.3:56633112-56633131 | MS.gene009829:intron | 30.0% |
| ! | TACTCATACCATTTTGTTCT+CGG | + | chr5.3:56632921-56632940 | None:intergenic | 30.0% |
| !! | GCATCGACATTTTATATTGA+AGG | - | chr5.3:56630550-56630569 | MS.gene009829:CDS | 30.0% |
| !! | TAAATCACTTGGTGTCAAAT+GGG | - | chr5.3:56632587-56632606 | MS.gene009829:CDS | 30.0% |
| !! | TTAAATCACTTGGTGTCAAA+TGG | - | chr5.3:56632586-56632605 | MS.gene009829:CDS | 30.0% |
| !!! | GTCCTTCATCTTTTTTTATC+TGG | + | chr5.3:56633092-56633111 | None:intergenic | 30.0% |
| !!! | TATGCCCATTTTGTTTTGAT+TGG | - | chr5.3:56631802-56631821 | MS.gene009829:CDS | 30.0% |
| AAAATGGGCATAAGTTGCTT+TGG | + | chr5.3:56631794-56631813 | None:intergenic | 35.0% | |
| AAACTACACTCATTCTGTGT+TGG | - | chr5.3:56632001-56632020 | MS.gene009829:CDS | 35.0% | |
| AAGCTAAAGAAACATCATGC+TGG | + | chr5.3:56630809-56630828 | None:intergenic | 35.0% | |
| AATGTTTCCGCAAAGTAAAC+GGG | - | chr5.3:56633037-56633056 | MS.gene009829:CDS | 35.0% | |
| AATTACTTAGTACCTTTGGC+AGG | + | chr5.3:56633167-56633186 | None:intergenic | 35.0% | |
| ACGAGTATCCAATAGAACAA+AGG | + | chr5.3:56631145-56631164 | None:intergenic | 35.0% | |
| ACTACAGAATGATCTTTGAG+AGG | - | chr5.3:56633518-56633537 | MS.gene009829:intron | 35.0% | |
| AGACAAATCTGTCATTGTCA+CGG | - | chr5.3:56630478-56630497 | MS.gene009829:CDS | 35.0% | |
| AGGATTCTCTTCATCATCAA+AGG | + | chr5.3:56633142-56633161 | None:intergenic | 35.0% | |
| ATAAACTCCTTGTCCAAGAA+TGG | + | chr5.3:56632875-56632894 | None:intergenic | 35.0% | |
| CACCTATGTTTCTTATGTCA+AGG | - | chr5.3:56632559-56632578 | MS.gene009829:CDS | 35.0% | |
| CATTTGTACTCTAGCAAAGA+TGG | - | chr5.3:56631399-56631418 | MS.gene009829:CDS | 35.0% | |
| GAACAGTAAAGGTAAACTCA+TGG | + | chr5.3:56632205-56632224 | None:intergenic | 35.0% | |
| GAAGGATCTGATGAGATATT+TGG | - | chr5.3:56632621-56632640 | MS.gene009829:CDS | 35.0% | |
| GTTGGTTATAGTTGGATTGA+TGG | - | chr5.3:56633297-56633316 | MS.gene009829:intron | 35.0% | |
| TAACTTCCCTATACATTGGT+TGG | - | chr5.3:56631202-56631221 | MS.gene009829:CDS | 35.0% | |
| TATTGATCCCGAGAACAAAA+TGG | - | chr5.3:56632910-56632929 | MS.gene009829:intron | 35.0% | |
| TCGTGATAACAGTTACATAG+TGG | - | chr5.3:56631161-56631180 | MS.gene009829:CDS | 35.0% | |
| TGAGTTTACCTTTACTGTTC+AGG | - | chr5.3:56632205-56632224 | MS.gene009829:intron | 35.0% | |
| TGATATTGACACGTAAACAC+CGG | + | chr5.3:56633715-56633734 | None:intergenic | 35.0% | |
| TGTCAATATCAGGTCGTATT+TGG | - | chr5.3:56633724-56633743 | MS.gene009829:intron | 35.0% | |
| TTGACATATTGATACAACGC+TGG | - | chr5.3:56630597-56630616 | MS.gene009829:intron | 35.0% | |
| TTGTGATGTTATTGCACACT+TGG | - | chr5.3:56630978-56630997 | MS.gene009829:intron | 35.0% | |
| ! | AACTTCCCTATACATTGGTT+GGG | - | chr5.3:56631203-56631222 | MS.gene009829:intron | 35.0% |
| ! | ACTCATACCATTTTGTTCTC+GGG | + | chr5.3:56632920-56632939 | None:intergenic | 35.0% |
| ! | CTTCAGGTTAAAGGTGTATA+TGG | - | chr5.3:56633615-56633634 | MS.gene009829:CDS | 35.0% |
| ! | TCATGCAGCACATTTTATAC+AGG | - | chr5.3:56633250-56633269 | MS.gene009829:intron | 35.0% |
| ! | TGAGAAGTATATTCTGAGGA+AGG | - | chr5.3:56633116-56633135 | MS.gene009829:intron | 35.0% |
| ! | TTTTGTTGACCAAGGTTTTC+TGG | + | chr5.3:56633987-56634006 | None:intergenic | 35.0% |
| !! | AAGTTGATTTATTGGCTCTC+TGG | + | chr5.3:56632826-56632845 | None:intergenic | 35.0% |
| !! | TGCTTTGGAAATCCAAAGTT+CGG | + | chr5.3:56631779-56631798 | None:intergenic | 35.0% |
| !! | TGGCTTTATGTTATGTAGGA+TGG | - | chr5.3:56632468-56632487 | MS.gene009829:intron | 35.0% |
| !!! | AACATGTTTTGGAATGTGTC+TGG | - | chr5.3:56631296-56631315 | MS.gene009829:intron | 35.0% |
| !!! | TTCTACAGTTTTGTTGACCA+AGG | + | chr5.3:56633995-56634014 | None:intergenic | 35.0% |
| AAAGAAGTTGCAGACTACCT+AGG | - | chr5.3:56632170-56632189 | MS.gene009829:intron | 40.0% | |
| AAATCTGTCATTGTCACGGT+AGG | - | chr5.3:56630482-56630501 | MS.gene009829:CDS | 40.0% | |
| AAATGGGTAATCTCTGGTGA+AGG | - | chr5.3:56632603-56632622 | MS.gene009829:CDS | 40.0% | |
| AGCAGTTACCTGAACAGTAA+AGG | + | chr5.3:56632216-56632235 | None:intergenic | 40.0% | |
| ATAGTGGCTAGAGATGCTAT+TGG | - | chr5.3:56631177-56631196 | MS.gene009829:CDS | 40.0% | |
| ATATGGTGTTTGACACGTGA+CGG | - | chr5.3:56633632-56633651 | MS.gene009829:intron | 40.0% | |
| CAATCCCCAACCAATGTATA+GGG | + | chr5.3:56631211-56631230 | None:intergenic | 40.0% | |
| CAGAAGGAACAATTCAGTGA+TGG | - | chr5.3:56633273-56633292 | MS.gene009829:intron | 40.0% | |
| CATCACAATCACTTCCAGTT+CGG | + | chr5.3:56630966-56630985 | None:intergenic | 40.0% | |
| CATGAACATCAGATACGACA+AGG | + | chr5.3:56630682-56630701 | None:intergenic | 40.0% | |
| CCAGATAGTAGAACACCAAA+AGG | + | chr5.3:56631902-56631921 | None:intergenic | 40.0% | |
| CTCAAAGCTAGAGGATCATA+AGG | + | chr5.3:56631480-56631499 | None:intergenic | 40.0% | |
| GATAGGATGATGCTTAATGC+TGG | - | chr5.3:56633451-56633470 | MS.gene009829:intron | 40.0% | |
| GATTACAGGCAGTGATAAAG+AGG | - | chr5.3:56631861-56631880 | MS.gene009829:intron | 40.0% | |
| GCAGTGCTACAAAGCTTATA+TGG | + | chr5.3:56633593-56633612 | None:intergenic | 40.0% | |
| GGAGTAACTTCCCTATACAT+TGG | - | chr5.3:56631198-56631217 | MS.gene009829:CDS | 40.0% | |
| GGATCTGATGAGATATTTGG+TGG | - | chr5.3:56632624-56632643 | MS.gene009829:CDS | 40.0% | |
| GGATGGTATAGATGCAATTG+AGG | - | chr5.3:56632485-56632504 | MS.gene009829:intron | 40.0% | |
| GGGAGCTATGAACAATTCAA+AGG | - | chr5.3:56629973-56629992 | MS.gene009829:CDS | 40.0% | |
| GGTGTTTACGTGTCAATATC+AGG | - | chr5.3:56633714-56633733 | MS.gene009829:intron | 40.0% | |
| GTTATTGCCCGTTTACTTTG+CGG | + | chr5.3:56633047-56633066 | None:intergenic | 40.0% | |
| TAAACGGGCAATAACTAAGC+TGG | - | chr5.3:56633052-56633071 | MS.gene009829:CDS | 40.0% | |
| TAGAGTACAAATGACCAGGT+GGG | + | chr5.3:56631392-56631411 | None:intergenic | 40.0% | |
| TCATTTGAACCATGACCTAG+AGG | + | chr5.3:56632285-56632304 | None:intergenic | 40.0% | |
| TCTGTAGTAGTATGCTTCCT+TGG | + | chr5.3:56633506-56633525 | None:intergenic | 40.0% | |
| TGGTGAAACTCTTCCTTGTT+TGG | + | chr5.3:56632672-56632691 | None:intergenic | 40.0% | |
| TGTTCTACTATCTGGAGGTT+TGG | - | chr5.3:56631907-56631926 | MS.gene009829:intron | 40.0% | |
| TTGCTAGAGTACAAATGACC+AGG | + | chr5.3:56631396-56631415 | None:intergenic | 40.0% | |
| TTGTACTCTAGCAAAGATGG+TGG | - | chr5.3:56631402-56631421 | MS.gene009829:CDS | 40.0% | |
| TTTACAACCATGAAGCTCTC+AGG | - | chr5.3:56630917-56630936 | MS.gene009829:intron | 40.0% | |
| ! | ACTTCCCTATACATTGGTTG+GGG | - | chr5.3:56631204-56631223 | MS.gene009829:intron | 40.0% |
| ! | CTTTCACAAAGCACCAAACA+AGG | - | chr5.3:56632656-56632675 | MS.gene009829:CDS | 40.0% |
| ! | GAACAATTCAGTGATGGTGT+TGG | - | chr5.3:56633279-56633298 | MS.gene009829:intron | 40.0% |
| ! | GACACATTGGTTGTGATTAC+AGG | - | chr5.3:56631847-56631866 | MS.gene009829:CDS | 40.0% |
| ! | GCACATTTTATACAGGCAGA+AGG | - | chr5.3:56633257-56633276 | MS.gene009829:intron | 40.0% |
| ! | GGTTCTTCACATTTTCCACT+AGG | - | chr5.3:56633423-56633442 | MS.gene009829:intron | 40.0% |
| ! | GTTTTGCAGCATGAGCTTTA+AGG | + | chr5.3:56633323-56633342 | None:intergenic | 40.0% |
| ! | TCTTTTCCAGCCTTAAGATC+AGG | + | chr5.3:56632155-56632174 | None:intergenic | 40.0% |
| ! | TGTTTTCAGAACCAGACTGT+CGG | + | chr5.3:56632367-56632386 | None:intergenic | 40.0% |
| ! | TTTGGAATGTGTCTGGATTC+AGG | - | chr5.3:56631303-56631322 | MS.gene009829:intron | 40.0% |
| ! | TTTTCCACTAGGTGACTGAT+AGG | - | chr5.3:56633434-56633453 | MS.gene009829:intron | 40.0% |
| !! | AAGATGGTGGATTTCGAAGA+TGG | - | chr5.3:56631415-56631434 | MS.gene009829:CDS | 40.0% |
| !! | AGTATGCTTCCTTGGTGTTT+GGG | + | chr5.3:56633498-56633517 | None:intergenic | 40.0% |
| !! | CGATTGATTAACTTGCCTGA+GGG | + | chr5.3:56633549-56633568 | None:intergenic | 40.0% |
| !! | CTTATGATCCTCTAGCTTTG+AGG | - | chr5.3:56631478-56631497 | MS.gene009829:CDS | 40.0% |
| !! | GTGATGGTGTTGGTTATAGT+TGG | - | chr5.3:56633289-56633308 | MS.gene009829:intron | 40.0% |
| !! | TAGTATGCTTCCTTGGTGTT+TGG | + | chr5.3:56633499-56633518 | None:intergenic | 40.0% |
| !! | TCGATTGATTAACTTGCCTG+AGG | + | chr5.3:56633550-56633569 | None:intergenic | 40.0% |
| !! | TTGATGACTGATGTGCCTTT+TGG | - | chr5.3:56631884-56631903 | MS.gene009829:intron | 40.0% |
| !! | TTGTTTTGCAGAACTCAGCA+AGG | - | chr5.3:56633830-56633849 | MS.gene009829:intron | 40.0% |
| !! | TTTGGTGTTCTACTATCTGG+AGG | - | chr5.3:56631902-56631921 | MS.gene009829:intron | 40.0% |
| !!! | CCTTTTGGTGTTCTACTATC+TGG | - | chr5.3:56631899-56631918 | MS.gene009829:intron | 40.0% |
| AAAAGCAGTCACCATGTTGG+TGG | + | chr5.3:56630397-56630416 | None:intergenic | 45.0% | |
| AAATCCAAAGTTCGGCCAAG+AGG | + | chr5.3:56631771-56631790 | None:intergenic | 45.0% | |
| ACCTGAAGGATCAAGGTTCT+TGG | + | chr5.3:56633926-56633945 | None:intergenic | 45.0% | |
| ACTCATGGTGAACAGTTCCT+AGG | + | chr5.3:56632190-56632209 | None:intergenic | 45.0% | |
| AGAAGCCAGAGTTCCATTCT+TGG | - | chr5.3:56632859-56632878 | MS.gene009829:CDS | 45.0% | |
| AGAGAATCCTTACCTGCCAA+AGG | - | chr5.3:56633152-56633171 | MS.gene009829:intron | 45.0% | |
| AGAGGATCATAAGGAGCTGA+TGG | + | chr5.3:56631471-56631490 | None:intergenic | 45.0% | |
| AGGTGTGCTTGCTCTAATTG+TGG | + | chr5.3:56632544-56632563 | None:intergenic | 45.0% | |
| ATCAAGCCGATGAAACCTCT+AGG | - | chr5.3:56632267-56632286 | MS.gene009829:intron | 45.0% | |
| ATTGGAAGCTTCTCCTGTTG+AGG | - | chr5.3:56634032-56634051 | MS.gene009829:intron | 45.0% | |
| CACAGCAAAAGCTGTTGAGT+GGG | - | chr5.3:56633888-56633907 | MS.gene009829:intron | 45.0% | |
| CAGAGTTCCATTCTTGGACA+AGG | - | chr5.3:56632865-56632884 | MS.gene009829:CDS | 45.0% | |
| CATAGTTGATCCTGCTTCTG+GGG | - | chr5.3:56630436-56630455 | MS.gene009829:intron | 45.0% | |
| CCAAAAAGCAGTCACCATGT+TGG | + | chr5.3:56630400-56630419 | None:intergenic | 45.0% | |
| CCAATCCCCAACCAATGTAT+AGG | + | chr5.3:56631212-56631231 | None:intergenic | 45.0% | |
| CCATAGTTGATCCTGCTTCT+GGG | - | chr5.3:56630435-56630454 | MS.gene009829:intron | 45.0% | |
| CCATGACCTAGAGGTTTCAT+CGG | + | chr5.3:56632276-56632295 | None:intergenic | 45.0% | |
| CGAAGACTTTGTGGACAAGT+TGG | - | chr5.3:56631107-56631126 | MS.gene009829:CDS | 45.0% | |
| CTAGAGTACAAATGACCAGG+TGG | + | chr5.3:56631393-56631412 | None:intergenic | 45.0% | |
| CTCATTCTGTGTTGGACTTG+AGG | - | chr5.3:56632009-56632028 | MS.gene009829:CDS | 45.0% | |
| CTTAGTACCTTTGGCAGGTA+AGG | + | chr5.3:56633162-56633181 | None:intergenic | 45.0% | |
| CTTGTCCAAGAATGGAACTC+TGG | + | chr5.3:56632867-56632886 | None:intergenic | 45.0% | |
| GAAGATGGTACAATCCTCCT+TGG | - | chr5.3:56631430-56631449 | MS.gene009829:CDS | 45.0% | |
| GATCAACTATGGCTAACCGT+TGG | + | chr5.3:56630427-56630446 | None:intergenic | 45.0% | |
| GGAATATGGCGAAGACTTTG+TGG | - | chr5.3:56631098-56631117 | MS.gene009829:CDS | 45.0% | |
| GGTGTCAAATGGGTAATCTC+TGG | - | chr5.3:56632597-56632616 | MS.gene009829:CDS | 45.0% | |
| TCAACAGGAGAAGCTTCCAA+TGG | + | chr5.3:56634033-56634052 | None:intergenic | 45.0% | |
| TCATCCTATCAGTCACCTAG+TGG | + | chr5.3:56633441-56633460 | None:intergenic | 45.0% | |
| TCCAAGAACCTTGATCCTTC+AGG | - | chr5.3:56633922-56633941 | MS.gene009829:intron | 45.0% | |
| TCCAATCACACATTCCGAAC+TGG | - | chr5.3:56630949-56630968 | MS.gene009829:intron | 45.0% | |
| TCCAGTTCGGAATGTGTGAT+TGG | + | chr5.3:56630953-56630972 | None:intergenic | 45.0% | |
| TGGAGGTTTGGACTCATCAT+TGG | - | chr5.3:56631919-56631938 | MS.gene009829:intron | 45.0% | |
| TGGCTCTCTGGCAATCATAT+TGG | + | chr5.3:56632814-56632833 | None:intergenic | 45.0% | |
| ! | AGACTGTCGGTTGGTTCAAT+CGG | + | chr5.3:56632354-56632373 | None:intergenic | 45.0% |
| ! | CCTATACATTGGTTGGGGAT+TGG | - | chr5.3:56631209-56631228 | MS.gene009829:intron | 45.0% |
| ! | CTTTGTAGCACTGCTACTTC+AGG | - | chr5.3:56633599-56633618 | MS.gene009829:CDS | 45.0% |
| ! | GACTTTGTGGACAAGTTGGA+TGG | - | chr5.3:56631111-56631130 | MS.gene009829:CDS | 45.0% |
| ! | GCACTGCTACTTCAGGTTAA+AGG | - | chr5.3:56633606-56633625 | MS.gene009829:CDS | 45.0% |
| ! | GTCTGGATTCAGGTTCTGTT+TGG | - | chr5.3:56631313-56631332 | MS.gene009829:CDS | 45.0% |
| ! | TACATTGGTTGGGGATTGGA+TGG | - | chr5.3:56631213-56631232 | MS.gene009829:intron | 45.0% |
| ! | TTTGAGGCATGCCTTTGAGA+AGG | - | chr5.3:56631494-56631513 | MS.gene009829:CDS | 45.0% |
| !! | CATTTTGAGTGTTTCCCACC+TGG | - | chr5.3:56631375-56631394 | MS.gene009829:CDS | 45.0% |
| !! | CCAACATGGTGACTGCTTTT+TGG | - | chr5.3:56630397-56630416 | MS.gene009829:intron | 45.0% |
| !! | GTATGCTTCCTTGGTGTTTG+GGG | + | chr5.3:56633497-56633516 | None:intergenic | 45.0% |
| !! | TCATCGGCTTGATCTCTAGT+CGG | + | chr5.3:56632260-56632279 | None:intergenic | 45.0% |
| !!! | ACTGCTTTTTGGCACACCAA+CGG | - | chr5.3:56630408-56630427 | MS.gene009829:intron | 45.0% |
| !! | AATGTAATTTATAAAAAAAT+AGG | - | chr5.3:56630233-56630252 | MS.gene009829:intron | 5.0% |
| AAGGCATGCCTCAAAGCTAG+AGG | + | chr5.3:56631489-56631508 | None:intergenic | 50.0% | |
| ACCAAAGCTGCTGAGCAATG+GGG | - | chr5.3:56631974-56631993 | MS.gene009829:intron | 50.0% | |
| CAATCCTCCTTGGTACTCTG+AGG | - | chr5.3:56631440-56631459 | MS.gene009829:CDS | 50.0% | |
| CACCAAAGCTGCTGAGCAAT+GGG | - | chr5.3:56631973-56631992 | MS.gene009829:intron | 50.0% | |
| CATACCTCTTGGCCGAACTT+TGG | - | chr5.3:56631764-56631783 | MS.gene009829:intron | 50.0% | |
| CCCAGAAGCAGGATCAACTA+TGG | + | chr5.3:56630438-56630457 | None:intergenic | 50.0% | |
| CCGATGAAACCTCTAGGTCA+TGG | - | chr5.3:56632273-56632292 | MS.gene009829:intron | 50.0% | |
| CTCTGAATGGCAACCTCAAC+AGG | + | chr5.3:56634048-56634067 | None:intergenic | 50.0% | |
| CTGTTGAGTGGGATGCTTCT+TGG | - | chr5.3:56633899-56633918 | MS.gene009829:intron | 50.0% | |
| GATTGAACCAACCGACAGTC+TGG | - | chr5.3:56632353-56632372 | MS.gene009829:intron | 50.0% | |
| GCACAGCAAAAGCTGTTGAG+TGG | - | chr5.3:56633887-56633906 | MS.gene009829:intron | 50.0% | |
| GCCATAGTTGATCCTGCTTC+TGG | - | chr5.3:56630434-56630453 | MS.gene009829:intron | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr5.3:56632686-56632705 | MS.gene009829:intron | 50.0% | |
| TCAGCAAGGCTAACTGTTCC+TGG | - | chr5.3:56633844-56633863 | MS.gene009829:intron | 50.0% | |
| TGACCTTGCGGCATGTTTCT+TGG | + | chr5.3:56632692-56632711 | None:intergenic | 50.0% | |
| TGAGGTTGCCATTCAGAGCT+AGG | - | chr5.3:56634050-56634069 | MS.gene009829:intron | 50.0% | |
| TGTTTGACACGTGACGGTGT+TGG | - | chr5.3:56633638-56633657 | MS.gene009829:intron | 50.0% | |
| TTCAGAACCAGACTGTCGGT+TGG | + | chr5.3:56632363-56632382 | None:intergenic | 50.0% | |
| ! | ATAGCCTCAGAGTACCAAGG+AGG | + | chr5.3:56631447-56631466 | None:intergenic | 50.0% |
| ! | CTTTGAGAGGTTCTTCCCTC+AGG | - | chr5.3:56633531-56633550 | MS.gene009829:CDS | 50.0% |
| ! | GGAATAGCCTCAGAGTACCA+AGG | + | chr5.3:56631450-56631469 | None:intergenic | 50.0% |
| !! | CGTAACAGATTGAAGCACCG+TGG | - | chr5.3:56630353-56630372 | MS.gene009829:intron | 50.0% |
| !! | CTTGGTGTTTGGGGTGTTGT+GGG | + | chr5.3:56633488-56633507 | None:intergenic | 50.0% |
| !! | TTGGTGTTTGGGGTGTTGTG+GGG | + | chr5.3:56633487-56633506 | None:intergenic | 50.0% |
| CATGCAACAGTTGGTCCTCC+AGG | + | chr5.3:56633865-56633884 | None:intergenic | 55.0% | |
| CCACAACACCCCAAACACCA+AGG | - | chr5.3:56633486-56633505 | MS.gene009829:intron | 55.0% | |
| CCACCAAAGCTGCTGAGCAA+TGG | - | chr5.3:56631972-56631991 | MS.gene009829:intron | 55.0% | |
| GCAAGGCTAACTGTTCCTGG+AGG | - | chr5.3:56633847-56633866 | MS.gene009829:intron | 55.0% | |
| GCTGCTTCCTGAGAGCTTCA+TGG | + | chr5.3:56630927-56630946 | None:intergenic | 55.0% | |
| GCTGTGCTGCATGCAACAGT+TGG | + | chr5.3:56633874-56633893 | None:intergenic | 55.0% | |
| GTAGGGCTCGCCTGATCTTA+AGG | - | chr5.3:56632142-56632161 | MS.gene009829:intron | 55.0% | |
| TCCCCATTGCTCAGCAGCTT+TGG | + | chr5.3:56631978-56631997 | None:intergenic | 55.0% | |
| ! | AGAGGTTGATCCCCAGAAGC+AGG | + | chr5.3:56630449-56630468 | None:intergenic | 55.0% |
| ! | CAGCAGCTTTGGTGGTTGCT+AGG | + | chr5.3:56631967-56631986 | None:intergenic | 55.0% |
| ! | CCATTGCTCAGCAGCTTTGG+TGG | + | chr5.3:56631975-56631994 | None:intergenic | 55.0% |
| !! | CCTTGGTGTTTGGGGTGTTG+TGG | + | chr5.3:56633489-56633508 | None:intergenic | 55.0% |
| !! | TGGTGTTTGGGGTGTTGTGG+GGG | + | chr5.3:56633486-56633505 | None:intergenic | 55.0% |
| GGCTCGCCTGATCTTAAGGC+TGG | - | chr5.3:56632146-56632165 | MS.gene009829:intron | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr5.3:56630383-56630402 | MS.gene009829:intron | 60.0% |
| ACCGTGGCCCTGACTGGAGT+GGG | - | chr5.3:56630369-56630388 | MS.gene009829:intron | 65.0% | |
| GGTGGAGCCCACTCCAGTCA+GGG | + | chr5.3:56630379-56630398 | None:intergenic | 65.0% | |
| TGGTGGAGCCCACTCCAGTC+AGG | + | chr5.3:56630380-56630399 | None:intergenic | 65.0% | |
| !! | TGAAGCACCGTGGCCCTGAC+TGG | - | chr5.3:56630363-56630382 | MS.gene009829:intron | 65.0% |
| CACCGTGGCCCTGACTGGAG+TGG | - | chr5.3:56630368-56630387 | MS.gene009829:intron | 70.0% | |
| GCCCACTCCAGTCAGGGCCA+CGG | + | chr5.3:56630373-56630392 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 56629947 | 56634071 | 56629947 | ID=MS.gene009829 |
| chr5.3 | mRNA | 56629947 | 56634071 | 56629947 | ID=MS.gene009829.t1;Parent=MS.gene009829 |
| chr5.3 | exon | 56634060 | 56634071 | 56634060 | ID=MS.gene009829.t1.exon1;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56634060 | 56634071 | 56634060 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56633519 | 56633650 | 56633519 | ID=MS.gene009829.t1.exon2;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56633519 | 56633650 | 56633519 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56633019 | 56633114 | 56633019 | ID=MS.gene009829.t1.exon3;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56633019 | 56633114 | 56633019 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56632784 | 56632925 | 56632784 | ID=MS.gene009829.t1.exon4;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56632784 | 56632925 | 56632784 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56632503 | 56632693 | 56632503 | ID=MS.gene009829.t1.exon5;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56632503 | 56632693 | 56632503 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56631988 | 56632149 | 56631988 | ID=MS.gene009829.t1.exon6;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56631988 | 56632149 | 56631988 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56631792 | 56631872 | 56631792 | ID=MS.gene009829.t1.exon7;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56631792 | 56631872 | 56631792 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56631311 | 56631532 | 56631311 | ID=MS.gene009829.t1.exon8;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56631311 | 56631532 | 56631311 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56631087 | 56631221 | 56631087 | ID=MS.gene009829.t1.exon9;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56631087 | 56631221 | 56631087 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56630845 | 56630925 | 56630845 | ID=MS.gene009829.t1.exon10;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56630845 | 56630925 | 56630845 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56630674 | 56630760 | 56630674 | ID=MS.gene009829.t1.exon11;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56630674 | 56630760 | 56630674 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56630466 | 56630573 | 56630466 | ID=MS.gene009829.t1.exon12;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56630466 | 56630573 | 56630466 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| chr5.3 | exon | 56629947 | 56630177 | 56629947 | ID=MS.gene009829.t1.exon13;Parent=MS.gene009829.t1 |
| chr5.3 | CDS | 56629947 | 56630177 | 56629947 | ID=cds.MS.gene009829.t1;Parent=MS.gene009829.t1 |
| Gene Sequence |
| Protein sequence |
