AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013180.t1 MTR_3g098730 97.653 554 12 1 1 554 2 554 0.0 1097
MS.gene013180.t1 MTR_8g032570 35.250 539 320 13 29 553 37 560 1.83e-83 270
MS.gene013180.t1 MTR_8g032570 35.250 539 320 13 29 553 60 583 4.76e-83 270
MS.gene013180.t1 MTR_7g076220 32.963 540 333 10 29 553 34 559 1.25e-80 263
MS.gene013180.t1 MTR_4g091320 28.195 532 358 12 28 542 38 562 4.48e-45 168
MS.gene013180.t1 MTR_3g466220 32.338 201 128 5 156 355 568 761 1.10e-13 74.7
MS.gene013180.t1 MTR_3g466220 32.338 201 128 5 156 355 547 740 1.46e-13 74.3
MS.gene013180.t1 MTR_4g063800 32.558 215 139 4 138 350 348 558 3.00e-13 72.8
MS.gene013180.t1 MTR_7g097020 31.429 210 140 3 146 355 485 690 5.28e-13 72.4
MS.gene013180.t1 MTR_1g069845 31.429 210 140 3 146 355 443 648 1.85e-12 70.5
MS.gene013180.t1 MTR_1g069845 31.429 210 140 3 146 355 447 652 2.51e-12 70.1
MS.gene013180.t1 MTR_1g069845 31.429 210 140 3 146 355 326 531 3.17e-12 69.7
MS.gene013180.t1 MTR_4g485520 29.817 218 146 4 138 355 372 582 1.31e-11 67.8
MS.gene013180.t1 MTR_4g485520 29.817 218 146 4 138 355 204 414 1.38e-11 67.4
MS.gene013180.t1 MTR_5g083030 29.134 254 154 9 134 382 396 628 2.89e-11 66.6
MS.gene013180.t1 MTR_4g007850 35.043 117 74 2 418 532 380 496 5.49e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013180.t1 AT5G50900 58.748 543 212 6 19 554 18 555 0.0 615
MS.gene013180.t1 AT2G45720 34.644 534 324 13 28 553 36 552 2.67e-86 278
MS.gene013180.t1 AT2G45720 34.644 534 324 13 28 553 36 552 2.67e-86 278
MS.gene013180.t1 AT2G45720 34.644 534 324 13 28 553 36 552 2.67e-86 278
MS.gene013180.t1 AT2G45720 34.644 534 324 13 28 553 36 552 2.67e-86 278
MS.gene013180.t1 AT2G45720 34.644 534 324 13 28 553 36 552 2.67e-86 278
MS.gene013180.t1 AT1G01830 34.470 557 329 17 15 553 36 574 1.57e-70 237
MS.gene013180.t1 AT1G01830 34.470 557 329 17 15 553 36 574 1.57e-70 237
MS.gene013180.t1 AT1G01830 34.470 557 329 17 15 553 36 574 1.57e-70 237
MS.gene013180.t1 AT1G61350 27.206 544 364 14 32 552 34 568 7.37e-46 170
MS.gene013180.t1 AT2G05810 28.425 489 328 10 83 554 93 576 2.59e-39 151
MS.gene013180.t1 AT2G05810 28.425 489 328 10 83 554 93 576 2.59e-39 151
MS.gene013180.t1 AT1G23030 30.939 181 123 1 141 321 331 509 8.41e-13 71.6
MS.gene013180.t1 AT2G23140 28.571 217 151 3 139 355 539 751 7.88e-12 68.6
MS.gene013180.t1 AT2G23140 28.571 217 151 3 139 355 539 751 7.88e-12 68.6
MS.gene013180.t1 AT2G23140 28.571 217 151 3 139 355 542 754 7.96e-12 68.6
MS.gene013180.t1 AT2G23140 28.571 217 151 3 139 355 350 562 2.58e-11 67.0
MS.gene013180.t1 AT2G23140 28.571 217 151 3 139 355 350 562 2.58e-11 67.0

Find 172 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTACCGTGGGGTAAAATT+TGG 0.152310 3.3:-81245892 None:intergenic
GAATCATTTGGTTAGGGTTT+TGG 0.180873 3.3:+81246306 MS.gene013180:CDS
GAACCCTGCTTTGGTTAATT+TGG 0.181771 3.3:+81247080 MS.gene013180:CDS
GGTTGAAATGTTGAGGTATT+TGG 0.223216 3.3:+81246735 MS.gene013180:CDS
GGCTAAGTTTAATGAAATTA+AGG 0.251879 3.3:+81246504 MS.gene013180:CDS
TTGAGTGTTTGAAGAATTAT+TGG 0.266104 3.3:+81246677 MS.gene013180:CDS
GCTTGTTGAGTTGGATATTC+CGG 0.273134 3.3:+81247200 MS.gene013180:CDS
GAAATACCCTGTTTCGGTTC+TGG 0.283357 3.3:+81247107 MS.gene013180:CDS
ATTGCAGTGGCGCGTGATTC+TGG 0.283476 3.3:-81246085 None:intergenic
AGAAATCGGTGAGGTGGTTT+TGG 0.290234 3.3:-81245760 None:intergenic
TGAGTTGGTGGTGGAGGATT+TGG 0.294911 3.3:-81245795 None:intergenic
GAAAGCTTGTATTGCGCTTC+AGG 0.297814 3.3:+81246354 MS.gene013180:CDS
CTTTCAATAGAAGGATCTTT+AGG 0.301417 3.3:+81247019 MS.gene013180:CDS
GACTTGGTCGTGGTAAGATT+TGG 0.304663 3.3:+81247244 MS.gene013180:CDS
GGGTTGGCTTCGTCTGGAAC+GGG 0.312249 3.3:+81246565 MS.gene013180:CDS
AATCGATTTGGCTTTGAGTT+TGG 0.314588 3.3:-81245916 None:intergenic
GGGTTTGTTGGGAGGGTGAT+TGG 0.317282 3.3:+81246796 MS.gene013180:CDS
ACTTGGTCGTGGTAAGATTT+GGG 0.323155 3.3:+81247245 MS.gene013180:CDS
TGCAGCACCCTTTCAATAGA+AGG 0.329460 3.3:+81247010 MS.gene013180:CDS
AGATCGAACGGCTTCACGTT+TGG 0.340147 3.3:-81246023 None:intergenic
GGATGAGAGTATGAGGGTTT+TGG 0.343750 3.3:+81246636 MS.gene013180:CDS
TGTTGTTGAATCATTTGGTT+AGG 0.343807 3.3:+81246299 MS.gene013180:CDS
TTGTTAGGGTTGGCTTCGTC+TGG 0.344793 3.3:+81246559 MS.gene013180:CDS
GGATGGAGTGGAGGAGGTGA+AGG 0.346870 3.3:-81245823 None:intergenic
AAACGGCGTCGTTGAGGGTT+TGG 0.352514 3.3:-81245847 None:intergenic
GTTGTTGTTGTTGAATCATT+TGG 0.357475 3.3:+81246294 MS.gene013180:CDS
GGTGGAATTTCGTCTCTGTT+AGG 0.358232 3.3:+81246421 MS.gene013180:CDS
TTTACCGTGGGGTAAAATTT+GGG 0.360306 3.3:-81245891 None:intergenic
GACTCCGAAGATTGACCATT+TGG 0.363460 3.3:-81245723 None:intergenic
CTTGTTGAGTTGGATATTCC+GGG 0.366525 3.3:+81247201 MS.gene013180:CDS
TGGTGAAGGGTTTGTTGGGA+GGG 0.366712 3.3:+81246789 MS.gene013180:CDS
TAACCAAAGCAGGGTTCAAT+AGG 0.373568 3.3:-81247074 None:intergenic
AGTGAAACCAGAACCGAAAC+AGG 0.386932 3.3:-81247114 None:intergenic
AGGTTCAGACAAACGCTGAT+AGG 0.387176 3.3:-81245650 None:intergenic
AGGGTTGGCTTCGTCTGGAA+CGG 0.394672 3.3:+81246564 MS.gene013180:CDS
TGCGAGGGCTGTTTATGCTA+TGG 0.395074 3.3:+81246858 MS.gene013180:CDS
TTTGAAGAATTATTGGGATT+CGG 0.396056 3.3:+81246684 MS.gene013180:CDS
CCAACTAAAACCTCATCAAT+TGG 0.397057 3.3:-81246769 None:intergenic
TTAGTTGGTGAAGGGTTTGT+TGG 0.400245 3.3:+81246784 MS.gene013180:CDS
TCACCTATTGAACCCTGCTT+TGG 0.400666 3.3:+81247071 MS.gene013180:CDS
GGAGAGTGAGTTGGTGGTGG+AGG 0.401750 3.3:-81245801 None:intergenic
TAGTTGGTGAAGGGTTTGTT+GGG 0.401880 3.3:+81246785 MS.gene013180:CDS
TGGCGATAAGTGAATCGATT+TGG 0.404988 3.3:-81245928 None:intergenic
CGGAAACAAATGGTGGCTGC+TGG 0.406988 3.3:+81247156 MS.gene013180:CDS
GGATAAGAAATACCCTGTTT+CGG 0.411451 3.3:+81247101 MS.gene013180:CDS
TTGTGTGGCAAATTTGATTT+CGG 0.412915 3.3:+81246612 MS.gene013180:CDS
AAGGGAGAGTGAGTTGGTGG+TGG 0.415218 3.3:-81245804 None:intergenic
GCGAGGGCTGTTTATGCTAT+GGG 0.416753 3.3:+81246859 MS.gene013180:CDS
AAATAAGACGAGAAAGGAAA+TGG 0.420093 3.3:+81246894 MS.gene013180:CDS
TCCTTCTTTGATTAAGATGT+TGG 0.421703 3.3:+81246933 MS.gene013180:CDS
GTGTAGTTCCGGTGCTGGTT+CGG 0.423585 3.3:+81246170 MS.gene013180:CDS
GGCTTCGTCTGGAACGGGGT+TGG 0.429253 3.3:+81246570 MS.gene013180:CDS
TTATCCAAATTAACCAAAGC+AGG 0.430725 3.3:-81247084 None:intergenic
TTTCGGAGGATGAGAGTATG+AGG 0.432008 3.3:+81246629 MS.gene013180:CDS
CTCATCGCACGGTTGCAAAT+CGG 0.432560 3.3:+81246058 MS.gene013180:CDS
CTCCTTCATATCAGAGGAGC+TGG 0.435157 3.3:-81246203 None:intergenic
GTGGAATTTCGTCTCTGTTA+GGG 0.438416 3.3:+81246422 MS.gene013180:CDS
GCAAGGTGTAGTTCCGGTGC+TGG 0.439174 3.3:+81246165 MS.gene013180:CDS
GTTTATGCTATGGGTTTGAA+TGG 0.440282 3.3:+81246868 MS.gene013180:CDS
GGAATATTCAGTGGAGAAAT+CGG 0.443636 3.3:-81245774 None:intergenic
TGAAATTAAGGAGAATTTCG+TGG 0.448289 3.3:+81246516 MS.gene013180:CDS
ATCTGCTGCAATGGCGTTGT+CGG 0.448484 3.3:+81246981 MS.gene013180:CDS
GGTTCAAAGAAATTGTTAGA+TGG 0.449366 3.3:+81247222 MS.gene013180:CDS
GAGTGAAACGGCGTCGTTGA+GGG 0.451125 3.3:-81245852 None:intergenic
TTGGTGAAGGGTTTGTTGGG+AGG 0.455506 3.3:+81246788 MS.gene013180:CDS
AAGAAATTGTTAGATGGACT+TGG 0.456660 3.3:+81247228 MS.gene013180:CDS
TTTGGAGGATGGAGTGGAGG+AGG 0.460053 3.3:-81245829 None:intergenic
TAAAGATCCTTCTATTGAAA+GGG 0.462836 3.3:-81247017 None:intergenic
CTAAAGATCCTTCTATTGAA+AGG 0.463381 3.3:-81247018 None:intergenic
GTTGTTGAATCATTTGGTTA+GGG 0.469282 3.3:+81246300 MS.gene013180:CDS
GTGAAGGGAGAGTGAGTTGG+TGG 0.471053 3.3:-81245807 None:intergenic
CGCAGTCGGTGACGTGGCGG+TGG 0.472374 3.3:-81245955 None:intergenic
TACGCAGAAGCTTGTTGAGT+TGG 0.472425 3.3:+81247191 MS.gene013180:CDS
AATAAGACGAGAAAGGAAAT+GGG 0.475260 3.3:+81246895 MS.gene013180:CDS
AAAACCAAATGGTCAATCTT+CGG 0.476063 3.3:+81245719 MS.gene013180:CDS
GTCGTTGAGGGTTTGGAGGA+TGG 0.478197 3.3:-81245840 None:intergenic
CGGCGTCGTTGAGGGTTTGG+AGG 0.482940 3.3:-81245844 None:intergenic
TCTTTGATTAAGATGTTGGA+TGG 0.483116 3.3:+81246937 MS.gene013180:CDS
GGTGAGGATTGCGGCTGCGA+GGG 0.490524 3.3:+81246843 MS.gene013180:CDS
TGAGTGTTTGAAGAATTATT+GGG 0.492153 3.3:+81246678 MS.gene013180:CDS
TGATTCAGAGTCTTGAAGTA+GGG 0.493354 3.3:+81246713 MS.gene013180:CDS
TCCAACATCTTAATCAAAGA+AGG 0.499119 3.3:-81246934 None:intergenic
GGAAACAAATGGTGGCTGCT+GGG 0.501374 3.3:+81247157 MS.gene013180:CDS
TGAGGGTTTGGAGGATGGAG+TGG 0.501954 3.3:-81245835 None:intergenic
AGGGACAATGCTAGAGCGAT+TGG 0.504635 3.3:+81246391 MS.gene013180:CDS
GGGTTTGGAGGATGGAGTGG+AGG 0.505537 3.3:-81245832 None:intergenic
GATGGAGTGGAGGAGGTGAA+GGG 0.509401 3.3:-81245822 None:intergenic
TTGTTAGATGGACTTGGTCG+TGG 0.511994 3.3:+81247234 MS.gene013180:CDS
TTCCAGCTCCTCTGATATGA+AGG 0.514211 3.3:+81246201 MS.gene013180:CDS
TTTCGAGGAGGAGGCCGCTA+CGG 0.514584 3.3:-81245988 None:intergenic
GCTGCATAACCTTGTGAACC+TGG 0.516453 3.3:-81246463 None:intergenic
GCTTCACGTTTGGAGAAAGC+GGG 0.517549 3.3:-81246013 None:intergenic
TGCTATTTCGAGAGTTTCCA+CGG 0.517769 3.3:+81246237 MS.gene013180:CDS
GAGGTGAAGGGAGAGTGAGT+TGG 0.520380 3.3:-81245810 None:intergenic
ATTAAGATGTTGGATGGGAA+AGG 0.520569 3.3:+81246943 MS.gene013180:CDS
TTCAGGCGTTGAGTTTGACT+AGG 0.520825 3.3:+81246371 MS.gene013180:CDS
CGTCGCGCAAGGTGTAGTTC+CGG 0.521124 3.3:+81246159 MS.gene013180:CDS
ATTTGTCAAGGCGGAACACC+AGG 0.523455 3.3:+81246445 MS.gene013180:CDS
GGTGACGTGGCGGTGGAGAG+TGG 0.523638 3.3:-81245948 None:intergenic
GAAGACTTGTCGGAAACAAA+TGG 0.525091 3.3:+81247146 MS.gene013180:CDS
TCTAACAATTTCTTTGAACC+CGG 0.526693 3.3:-81247219 None:intergenic
GGATCTTTAGGAAGGATGAG+AGG 0.530549 3.3:+81247031 MS.gene013180:CDS
ATGATTCAGAGTCTTGAAGT+AGG 0.530753 3.3:+81246712 MS.gene013180:CDS
GGCTTCACGTTTGGAGAAAG+CGG 0.535924 3.3:-81246014 None:intergenic
TTCGGAGGATGAGAGTATGA+GGG 0.538974 3.3:+81246630 MS.gene013180:CDS
CTTTGATTAAGATGTTGGAT+GGG 0.539664 3.3:+81246938 MS.gene013180:CDS
GATCTTTAGGAAGGATGAGA+GGG 0.541790 3.3:+81247032 MS.gene013180:CDS
CTTGGTCGTGGTAAGATTTG+GGG 0.544253 3.3:+81247246 MS.gene013180:CDS
TTGAGGTATTTGGCTATGAC+TGG 0.545352 3.3:+81246745 MS.gene013180:CDS
TTGAGTTTGGAGTTTACCGT+GGG 0.545419 3.3:-81245903 None:intergenic
GAAACAAATGGTGGCTGCTG+GGG 0.546643 3.3:+81247158 MS.gene013180:CDS
CAATAGAAGGATCTTTAGGA+AGG 0.547514 3.3:+81247023 MS.gene013180:CDS
AAGTAGGGGTTGAAATGTTG+AGG 0.549591 3.3:+81246728 MS.gene013180:CDS
AAGAATAATTTACTTGCGGA+GGG 0.550763 3.3:+81246271 MS.gene013180:CDS
CGGTGAGGATTGCGGCTGCG+AGG 0.553805 3.3:+81246842 MS.gene013180:CDS
TCGAGTAACCGAACCAGCAC+CGG 0.554153 3.3:-81246178 None:intergenic
ATCTTTAGGAAGGATGAGAG+GGG 0.554644 3.3:+81247033 MS.gene013180:CDS
TTGGCACGAGAAAATGCGAT+TGG 0.565368 3.3:+81246589 MS.gene013180:CDS
TCAGGCGTTGAGTTTGACTA+GGG 0.566469 3.3:+81246372 MS.gene013180:CDS
GGAGAAAGAATCTGCTGCAA+TGG 0.567130 3.3:+81246972 MS.gene013180:CDS
AGAGTTTCCACGGTGGAGAG+TGG 0.573107 3.3:+81246247 MS.gene013180:CDS
GAGTTTCCACGGTGGAGAGT+GGG 0.574172 3.3:+81246248 MS.gene013180:CDS
GGTTCAGACAAACGCTGATA+GGG 0.575676 3.3:-81245649 None:intergenic
TATCCAAATTAACCAAAGCA+GGG 0.575946 3.3:-81247083 None:intergenic
ATTTCTCGTTAGAGATCGAA+CGG 0.576485 3.3:-81246035 None:intergenic
TGGCGGAAATAAGACGAGAA+AGG 0.576753 3.3:+81246888 MS.gene013180:CDS
TTTCTATGAGTGAATTGGTG+AGG 0.582509 3.3:-81245670 None:intergenic
GGAGGATTTGGAATATTCAG+TGG 0.587898 3.3:-81245783 None:intergenic
GGTTGGCTTCGTCTGGAACG+GGG 0.590269 3.3:+81246566 MS.gene013180:CDS
TTTGAGTTTGGAGTTTACCG+TGG 0.593684 3.3:-81245904 None:intergenic
GAAGAATAATTTACTTGCGG+AGG 0.596771 3.3:+81246270 MS.gene013180:CDS
GATGTTGGATGGGAAAGGCG+TGG 0.603804 3.3:+81246948 MS.gene013180:CDS
TCTCTGTTAGGGATTTGTCA+AGG 0.604955 3.3:+81246433 MS.gene013180:CDS
GGCGGAACACCAGGTTCACA+AGG 0.606227 3.3:+81246454 MS.gene013180:CDS
GTAAAATTTGGGATTGACAG+TGG 0.606793 3.3:-81245880 None:intergenic
ATAAGACGAGAAAGGAAATG+GGG 0.610635 3.3:+81246896 MS.gene013180:CDS
CTTCACGTTTGGAGAAAGCG+GGG 0.611057 3.3:-81246012 None:intergenic
TAAGACGAGAAAGGAAATGG+GGG 0.612886 3.3:+81246897 MS.gene013180:CDS
TTCACAAGGTTATGCAGCAG+CGG 0.614157 3.3:+81246468 MS.gene013180:CDS
CAGTGGAGAAATCGGTGAGG+TGG 0.614649 3.3:-81245766 None:intergenic
GATTCAGAGTCTTGAAGTAG+GGG 0.614676 3.3:+81246714 MS.gene013180:CDS
TGGGAAGAATAATTTACTTG+CGG 0.619324 3.3:+81246267 MS.gene013180:CDS
CGGAACTACACCTTGCGCGA+CGG 0.625906 3.3:-81246158 None:intergenic
GTTACAATAGCCGTCGCGCA+AGG 0.626258 3.3:+81246148 MS.gene013180:CDS
TGTGGCAAATTTGATTTCGG+AGG 0.627323 3.3:+81246615 MS.gene013180:CDS
AGAGTGAAACGGCGTCGTTG+AGG 0.630604 3.3:-81245853 None:intergenic
AGAAAATGCGATTGGTTGTG+TGG 0.632842 3.3:+81246597 MS.gene013180:CDS
GCTAGAGCGATTGGATCTAG+AGG 0.633516 3.3:+81246400 MS.gene013180:CDS
AGAATAATTTACTTGCGGAG+GGG 0.633658 3.3:+81246272 MS.gene013180:CDS
GAAGGAATCAACAACAGAAG+CGG 0.633808 3.3:+81245625 MS.gene013180:CDS
GAATTTCGTGGAGGAGAATG+CGG 0.638789 3.3:+81246528 MS.gene013180:CDS
TATGCTATGGGTTTGAATGG+CGG 0.640687 3.3:+81246871 MS.gene013180:CDS
GTTGGATGGGAAAGGCGTGG+AGG 0.641910 3.3:+81246951 MS.gene013180:CDS
GAACATCGCAGTCGGTGACG+TGG 0.642100 3.3:-81245961 None:intergenic
TCCTCACCGTTAAAACATCA+CGG 0.642520 3.3:-81246828 None:intergenic
TTCACGTTTGGAGAAAGCGG+GGG 0.645949 3.3:-81246011 None:intergenic
TAACGAGAAATCTCATCGCA+CGG 0.653102 3.3:+81246047 MS.gene013180:CDS
AGAGCGATTGGATCTAGAGG+TGG 0.653759 3.3:+81246403 MS.gene013180:CDS
TATGACTGGTCCAATTGATG+AGG 0.665742 3.3:+81246759 MS.gene013180:CDS
ACGGAAGAGAACATCGCAGT+CGG 0.666690 3.3:-81245969 None:intergenic
TAAGAGTGAGTCGATTGCAG+TGG 0.671105 3.3:-81246098 None:intergenic
GACTTGTCGGAAACAAATGG+TGG 0.684138 3.3:+81247149 MS.gene013180:CDS
GTGAAACCAGAACCGAAACA+GGG 0.684741 3.3:-81247113 None:intergenic
CATCGCAGTCGGTGACGTGG+CGG 0.687454 3.3:-81245958 None:intergenic
AATTAAGGAGAATTTCGTGG+AGG 0.696109 3.3:+81246519 MS.gene013180:CDS
ACAGTGGTGAGAGAGTGAAA+CGG 0.701293 3.3:-81245864 None:intergenic
ATTCTTCCCACTCTCCACCG+TGG 0.707457 3.3:-81246254 None:intergenic
TGCGATGTTCTCTTCCGTAG+CGG 0.716213 3.3:+81245974 MS.gene013180:CDS
CTGTTAGGGATTTGTCAAGG+CGG 0.747669 3.3:+81246436 MS.gene013180:CDS
TGAGTTTGGAGTTTACCGTG+GGG 0.758546 3.3:-81245902 None:intergenic
ATTCAGTGGAGAAATCGGTG+AGG 0.771367 3.3:-81245769 None:intergenic
TATTTCGAGAGTTTCCACGG+TGG 0.826858 3.3:+81246240 MS.gene013180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GGCTAAGTTTAATGAAATTA+AGG + chr3.3:81246504-81246523 MS.gene013180:CDS 25.0%
! TAAAGATCCTTCTATTGAAA+GGG - chr3.3:81247020-81247039 None:intergenic 25.0%
! TGAGTGTTTGAAGAATTATT+GGG + chr3.3:81246678-81246697 MS.gene013180:CDS 25.0%
! TTGAGTGTTTGAAGAATTAT+TGG + chr3.3:81246677-81246696 MS.gene013180:CDS 25.0%
! TTTGAAGAATTATTGGGATT+CGG + chr3.3:81246684-81246703 MS.gene013180:CDS 25.0%
AAAACCAAATGGTCAATCTT+CGG + chr3.3:81245719-81245738 MS.gene013180:CDS 30.0%
AAATAAGACGAGAAAGGAAA+TGG + chr3.3:81246894-81246913 MS.gene013180:CDS 30.0%
AAGAATAATTTACTTGCGGA+GGG + chr3.3:81246271-81246290 MS.gene013180:CDS 30.0%
AATAAGACGAGAAAGGAAAT+GGG + chr3.3:81246895-81246914 MS.gene013180:CDS 30.0%
CTAAAGATCCTTCTATTGAA+AGG - chr3.3:81247021-81247040 None:intergenic 30.0%
CTTTCAATAGAAGGATCTTT+AGG + chr3.3:81247019-81247038 MS.gene013180:CDS 30.0%
CTTTGATTAAGATGTTGGAT+GGG + chr3.3:81246938-81246957 MS.gene013180:CDS 30.0%
GGTTCAAAGAAATTGTTAGA+TGG + chr3.3:81247222-81247241 MS.gene013180:CDS 30.0%
GTTGTTGAATCATTTGGTTA+GGG + chr3.3:81246300-81246319 MS.gene013180:CDS 30.0%
TATCCAAATTAACCAAAGCA+GGG - chr3.3:81247086-81247105 None:intergenic 30.0%
TCCAACATCTTAATCAAAGA+AGG - chr3.3:81246937-81246956 None:intergenic 30.0%
TCCATCACTTAAAAACCAAA+TGG + chr3.3:81245708-81245727 MS.gene013180:CDS 30.0%
TCCTTCTTTGATTAAGATGT+TGG + chr3.3:81246933-81246952 MS.gene013180:CDS 30.0%
TCTAACAATTTCTTTGAACC+CGG - chr3.3:81247222-81247241 None:intergenic 30.0%
TCTTTGATTAAGATGTTGGA+TGG + chr3.3:81246937-81246956 MS.gene013180:CDS 30.0%
TGAAATTAAGGAGAATTTCG+TGG + chr3.3:81246516-81246535 MS.gene013180:CDS 30.0%
TGGGAAGAATAATTTACTTG+CGG + chr3.3:81246267-81246286 MS.gene013180:CDS 30.0%
TGTTGTTGAATCATTTGGTT+AGG + chr3.3:81246299-81246318 MS.gene013180:CDS 30.0%
TTATCCAAATTAACCAAAGC+AGG - chr3.3:81247087-81247106 None:intergenic 30.0%
! AAGAAATTGTTAGATGGACT+TGG + chr3.3:81247228-81247247 MS.gene013180:CDS 30.0%
! GTTGTTGTTGTTGAATCATT+TGG + chr3.3:81246294-81246313 MS.gene013180:CDS 30.0%
! TTCGTTTTCTATGAGTGAAT+TGG - chr3.3:81245678-81245697 None:intergenic 30.0%
! TTGTGTGGCAAATTTGATTT+CGG + chr3.3:81246612-81246631 MS.gene013180:CDS 30.0%
!! AATGCGGTTATTGTTTTGTT+AGG + chr3.3:81246544-81246563 MS.gene013180:CDS 30.0%
!! ATGCGGTTATTGTTTTGTTA+GGG + chr3.3:81246545-81246564 MS.gene013180:CDS 30.0%
!!! ACCATTTGGTTTTTAAGTGA+TGG - chr3.3:81245712-81245731 None:intergenic 30.0%
!!! TTTGGTTTTTAAGTGATGGA+CGG - chr3.3:81245708-81245727 None:intergenic 30.0%
AATTAAGGAGAATTTCGTGG+AGG + chr3.3:81246519-81246538 MS.gene013180:CDS 35.0%
AGAATAATTTACTTGCGGAG+GGG + chr3.3:81246272-81246291 MS.gene013180:CDS 35.0%
ATAAGACGAGAAAGGAAATG+GGG + chr3.3:81246896-81246915 MS.gene013180:CDS 35.0%
ATGATTCAGAGTCTTGAAGT+AGG + chr3.3:81246712-81246731 MS.gene013180:CDS 35.0%
ATTAAGATGTTGGATGGGAA+AGG + chr3.3:81246943-81246962 MS.gene013180:CDS 35.0%
ATTTCTCGTTAGAGATCGAA+CGG - chr3.3:81246038-81246057 None:intergenic 35.0%
CCAACTAAAACCTCATCAAT+TGG - chr3.3:81246772-81246791 None:intergenic 35.0%
GAAGAATAATTTACTTGCGG+AGG + chr3.3:81246270-81246289 MS.gene013180:CDS 35.0%
GGAATATTCAGTGGAGAAAT+CGG - chr3.3:81245777-81245796 None:intergenic 35.0%
GGATAAGAAATACCCTGTTT+CGG + chr3.3:81247101-81247120 MS.gene013180:CDS 35.0%
GTTTATGCTATGGGTTTGAA+TGG + chr3.3:81246868-81246887 MS.gene013180:CDS 35.0%
TGATTCAGAGTCTTGAAGTA+GGG + chr3.3:81246713-81246732 MS.gene013180:CDS 35.0%
TTTACCGTGGGGTAAAATTT+GGG - chr3.3:81245894-81245913 None:intergenic 35.0%
TTTCTATGAGTGAATTGGTG+AGG - chr3.3:81245673-81245692 None:intergenic 35.0%
! CAATAGAAGGATCTTTAGGA+AGG + chr3.3:81247023-81247042 MS.gene013180:CDS 35.0%
! GAATCATTTGGTTAGGGTTT+TGG + chr3.3:81246306-81246325 MS.gene013180:CDS 35.0%
! GGTTGAAATGTTGAGGTATT+TGG + chr3.3:81246735-81246754 MS.gene013180:CDS 35.0%
! GTAAAATTTGGGATTGACAG+TGG - chr3.3:81245883-81245902 None:intergenic 35.0%
! TGTTTTCTCCTTCATATCAG+AGG - chr3.3:81246212-81246231 None:intergenic 35.0%
! TTTTGCATTCGAAGACTTGT+CGG + chr3.3:81247136-81247155 MS.gene013180:CDS 35.0%
!! AATCGATTTGGCTTTGAGTT+TGG - chr3.3:81245919-81245938 None:intergenic 35.0%
!! CCAATTGATGAGGTTTTAGT+TGG + chr3.3:81246769-81246788 MS.gene013180:CDS 35.0%
!! GGTTATTGTTTTGTTAGGGT+TGG + chr3.3:81246549-81246568 MS.gene013180:CDS 35.0%
!! GTTGAACCGTGATGTTTTAA+CGG + chr3.3:81246822-81246841 MS.gene013180:CDS 35.0%
!!! ATGAGGTTTTAGTTGGTGAA+GGG + chr3.3:81246776-81246795 MS.gene013180:CDS 35.0%
!!! TTTGGTTAGGGTTTTGGATT+CGG + chr3.3:81246312-81246331 MS.gene013180:CDS 35.0%
AAGTAGGGGTTGAAATGTTG+AGG + chr3.3:81246728-81246747 MS.gene013180:CDS 40.0%
ACTTGGTCGTGGTAAGATTT+GGG + chr3.3:81247245-81247264 MS.gene013180:CDS 40.0%
GAACCCTGCTTTGGTTAATT+TGG + chr3.3:81247080-81247099 MS.gene013180:CDS 40.0%
GAAGACTTGTCGGAAACAAA+TGG + chr3.3:81247146-81247165 MS.gene013180:CDS 40.0%
GAAGGAATCAACAACAGAAG+CGG + chr3.3:81245625-81245644 MS.gene013180:CDS 40.0%
GATTCAGAGTCTTGAAGTAG+GGG + chr3.3:81246714-81246733 MS.gene013180:CDS 40.0%
GTGGAATTTCGTCTCTGTTA+GGG + chr3.3:81246422-81246441 MS.gene013180:CDS 40.0%
GTTTACCGTGGGGTAAAATT+TGG - chr3.3:81245895-81245914 None:intergenic 40.0%
TAACCAAAGCAGGGTTCAAT+AGG - chr3.3:81247077-81247096 None:intergenic 40.0%
TAACGAGAAATCTCATCGCA+CGG + chr3.3:81246047-81246066 MS.gene013180:CDS 40.0%
TAAGACGAGAAAGGAAATGG+GGG + chr3.3:81246897-81246916 MS.gene013180:CDS 40.0%
TATGCTATGGGTTTGAATGG+CGG + chr3.3:81246871-81246890 MS.gene013180:CDS 40.0%
TCCTCACCGTTAAAACATCA+CGG - chr3.3:81246831-81246850 None:intergenic 40.0%
TCTCTGTTAGGGATTTGTCA+AGG + chr3.3:81246433-81246452 MS.gene013180:CDS 40.0%
TGGCGATAAGTGAATCGATT+TGG - chr3.3:81245931-81245950 None:intergenic 40.0%
! AGAAAATGCGATTGGTTGTG+TGG + chr3.3:81246597-81246616 MS.gene013180:CDS 40.0%
! ATCTTTAGGAAGGATGAGAG+GGG + chr3.3:81247033-81247052 MS.gene013180:CDS 40.0%
! CAATCCCAAATTTTACCCCA+CGG + chr3.3:81245887-81245906 MS.gene013180:CDS 40.0%
! GATCTTTAGGAAGGATGAGA+GGG + chr3.3:81247032-81247051 MS.gene013180:CDS 40.0%
! GGAGGATTTGGAATATTCAG+TGG - chr3.3:81245786-81245805 None:intergenic 40.0%
! TATGACTGGTCCAATTGATG+AGG + chr3.3:81246759-81246778 MS.gene013180:CDS 40.0%
! TGTGGCAAATTTGATTTCGG+AGG + chr3.3:81246615-81246634 MS.gene013180:CDS 40.0%
! TTGAGGTATTTGGCTATGAC+TGG + chr3.3:81246745-81246764 MS.gene013180:CDS 40.0%
! TTGAGTTTGGAGTTTACCGT+GGG - chr3.3:81245906-81245925 None:intergenic 40.0%
! TTTGAGTTTGGAGTTTACCG+TGG - chr3.3:81245907-81245926 None:intergenic 40.0%
!! CTTGTTGAGTTGGATATTCC+GGG + chr3.3:81247201-81247220 MS.gene013180:CDS 40.0%
!! GCTTGTTGAGTTGGATATTC+CGG + chr3.3:81247200-81247219 MS.gene013180:CDS 40.0%
!! TAGTTGGTGAAGGGTTTGTT+GGG + chr3.3:81246785-81246804 MS.gene013180:CDS 40.0%
!! TGCTATTTCGAGAGTTTCCA+CGG + chr3.3:81246237-81246256 MS.gene013180:CDS 40.0%
!! TTAGTTGGTGAAGGGTTTGT+TGG + chr3.3:81246784-81246803 MS.gene013180:CDS 40.0%
!!! GATGAGGTTTTAGTTGGTGA+AGG + chr3.3:81246775-81246794 MS.gene013180:CDS 40.0%
!!! GTTTTTAAGTGATGGACGGT+GGG - chr3.3:81245704-81245723 None:intergenic 40.0%
!!! TGTTTTAACGGTGAGGATTG+CGG + chr3.3:81246834-81246853 MS.gene013180:CDS 40.0%
!!! TTGGTTAGGGTTTTGGATTC+GGG + chr3.3:81246313-81246332 MS.gene013180:CDS 40.0%
!!! TTTTTAAGTGATGGACGGTG+GGG - chr3.3:81245703-81245722 None:intergenic 40.0%
ACAGTGGTGAGAGAGTGAAA+CGG - chr3.3:81245867-81245886 None:intergenic 45.0%
AGAAAGGAAATGGGGGAATG+TGG + chr3.3:81246904-81246923 MS.gene013180:CDS 45.0%
AGGTTCAGACAAACGCTGAT+AGG - chr3.3:81245653-81245672 None:intergenic 45.0%
AGTGAAACCAGAACCGAAAC+AGG - chr3.3:81247117-81247136 None:intergenic 45.0%
ATTCAGTGGAGAAATCGGTG+AGG - chr3.3:81245772-81245791 None:intergenic 45.0%
CTGTTAGGGATTTGTCAAGG+CGG + chr3.3:81246436-81246455 MS.gene013180:CDS 45.0%
CTTGGTCGTGGTAAGATTTG+GGG + chr3.3:81247246-81247265 MS.gene013180:CDS 45.0%
GAAAGCTTGTATTGCGCTTC+AGG + chr3.3:81246354-81246373 MS.gene013180:CDS 45.0%
GAAAGGAAATGGGGGAATGT+GGG + chr3.3:81246905-81246924 MS.gene013180:CDS 45.0%
GAAATACCCTGTTTCGGTTC+TGG + chr3.3:81247107-81247126 MS.gene013180:CDS 45.0%
GAATTTCGTGGAGGAGAATG+CGG + chr3.3:81246528-81246547 MS.gene013180:CDS 45.0%
GACTCCGAAGATTGACCATT+TGG - chr3.3:81245726-81245745 None:intergenic 45.0%
GACTTGTCGGAAACAAATGG+TGG + chr3.3:81247149-81247168 MS.gene013180:CDS 45.0%
GGAGAAAGAATCTGCTGCAA+TGG + chr3.3:81246972-81246991 MS.gene013180:CDS 45.0%
GGTGGAATTTCGTCTCTGTT+AGG + chr3.3:81246421-81246440 MS.gene013180:CDS 45.0%
GGTTCAGACAAACGCTGATA+GGG - chr3.3:81245652-81245671 None:intergenic 45.0%
GTGAAACCAGAACCGAAACA+GGG - chr3.3:81247116-81247135 None:intergenic 45.0%
TAAGAGTGAGTCGATTGCAG+TGG - chr3.3:81246101-81246120 None:intergenic 45.0%
TATTTCGAGAGTTTCCACGG+TGG + chr3.3:81246240-81246259 MS.gene013180:CDS 45.0%
TCACCTATTGAACCCTGCTT+TGG + chr3.3:81247071-81247090 MS.gene013180:CDS 45.0%
TGCAGCACCCTTTCAATAGA+AGG + chr3.3:81247010-81247029 MS.gene013180:CDS 45.0%
TGGCGGAAATAAGACGAGAA+AGG + chr3.3:81246888-81246907 MS.gene013180:CDS 45.0%
TTCACAAGGTTATGCAGCAG+CGG + chr3.3:81246468-81246487 MS.gene013180:CDS 45.0%
TTCCAGCTCCTCTGATATGA+AGG + chr3.3:81246201-81246220 MS.gene013180:CDS 45.0%
TTGGCACGAGAAAATGCGAT+TGG + chr3.3:81246589-81246608 MS.gene013180:CDS 45.0%
! AGAAATCGGTGAGGTGGTTT+TGG - chr3.3:81245763-81245782 None:intergenic 45.0%
! GACTTGGTCGTGGTAAGATT+TGG + chr3.3:81247244-81247263 MS.gene013180:CDS 45.0%
! GGATCTTTAGGAAGGATGAG+AGG + chr3.3:81247031-81247050 MS.gene013180:CDS 45.0%
! TGAGTTTGGAGTTTACCGTG+GGG - chr3.3:81245905-81245924 None:intergenic 45.0%
! TTCGGAGGATGAGAGTATGA+GGG + chr3.3:81246630-81246649 MS.gene013180:CDS 45.0%
! TTGTTAGATGGACTTGGTCG+TGG + chr3.3:81247234-81247253 MS.gene013180:CDS 45.0%
! TTTCGGAGGATGAGAGTATG+AGG + chr3.3:81246629-81246648 MS.gene013180:CDS 45.0%
!! GGATGAGAGTATGAGGGTTT+TGG + chr3.3:81246636-81246655 MS.gene013180:CDS 45.0%
!! TACGCAGAAGCTTGTTGAGT+TGG + chr3.3:81247191-81247210 MS.gene013180:CDS 45.0%
!! TCAGGCGTTGAGTTTGACTA+GGG + chr3.3:81246372-81246391 MS.gene013180:CDS 45.0%
!! TTCAGGCGTTGAGTTTGACT+AGG + chr3.3:81246371-81246390 MS.gene013180:CDS 45.0%
!!! ACCGTGATGTTTTAACGGTG+AGG + chr3.3:81246827-81246846 MS.gene013180:CDS 45.0%
!!! GGTTTTTAAGTGATGGACGG+TGG - chr3.3:81245705-81245724 None:intergenic 45.0%
!!! TATGAGGGTTTTGGCTGTGA+AGG + chr3.3:81246645-81246664 MS.gene013180:CDS 45.0%
ACGGAAGAGAACATCGCAGT+CGG - chr3.3:81245972-81245991 None:intergenic 50.0%
AGAGCGATTGGATCTAGAGG+TGG + chr3.3:81246403-81246422 MS.gene013180:CDS 50.0%
AGATCGAACGGCTTCACGTT+TGG - chr3.3:81246026-81246045 None:intergenic 50.0%
AGGGACAATGCTAGAGCGAT+TGG + chr3.3:81246391-81246410 MS.gene013180:CDS 50.0%
ATCTGCTGCAATGGCGTTGT+CGG + chr3.3:81246981-81247000 MS.gene013180:CDS 50.0%
ATTTGTCAAGGCGGAACACC+AGG + chr3.3:81246445-81246464 MS.gene013180:CDS 50.0%
CTCATCGCACGGTTGCAAAT+CGG + chr3.3:81246058-81246077 MS.gene013180:CDS 50.0%
CTCCTTCATATCAGAGGAGC+TGG - chr3.3:81246206-81246225 None:intergenic 50.0%
CTTCACGTTTGGAGAAAGCG+GGG - chr3.3:81246015-81246034 None:intergenic 50.0%
GAAACAAATGGTGGCTGCTG+GGG + chr3.3:81247158-81247177 MS.gene013180:CDS 50.0%
GCGAGGGCTGTTTATGCTAT+GGG + chr3.3:81246859-81246878 MS.gene013180:CDS 50.0%
GCTAGAGCGATTGGATCTAG+AGG + chr3.3:81246400-81246419 MS.gene013180:CDS 50.0%
GCTGCATAACCTTGTGAACC+TGG - chr3.3:81246466-81246485 None:intergenic 50.0%
GCTTCACGTTTGGAGAAAGC+GGG - chr3.3:81246016-81246035 None:intergenic 50.0%
GGAAACAAATGGTGGCTGCT+GGG + chr3.3:81247157-81247176 MS.gene013180:CDS 50.0%
GGCTTCACGTTTGGAGAAAG+CGG - chr3.3:81246017-81246036 None:intergenic 50.0%
TGCGAGGGCTGTTTATGCTA+TGG + chr3.3:81246858-81246877 MS.gene013180:CDS 50.0%
TGCGATGTTCTCTTCCGTAG+CGG + chr3.3:81245974-81245993 MS.gene013180:CDS 50.0%
TTCACGTTTGGAGAAAGCGG+GGG - chr3.3:81246014-81246033 None:intergenic 50.0%
! GTTATGCAGCAGCGGTTTTG+AGG + chr3.3:81246476-81246495 MS.gene013180:CDS 50.0%
!! TGAGTTGGTGGTGGAGGATT+TGG - chr3.3:81245798-81245817 None:intergenic 50.0%
!! TGGTGAAGGGTTTGTTGGGA+GGG + chr3.3:81246789-81246808 MS.gene013180:CDS 50.0%
!! TTGGTGAAGGGTTTGTTGGG+AGG + chr3.3:81246788-81246807 MS.gene013180:CDS 50.0%
!! TTGTTAGGGTTGGCTTCGTC+TGG + chr3.3:81246559-81246578 MS.gene013180:CDS 50.0%
!!! AGCAGCGGTTTTGAGGAATC+TGG + chr3.3:81246483-81246502 MS.gene013180:CDS 50.0%
!!! AGGGTTTTGGATTCGGGAAG+TGG + chr3.3:81246319-81246338 MS.gene013180:CDS 50.0%
!!! AGGGTTTTGGCTGTGAAGGA+AGG + chr3.3:81246649-81246668 MS.gene013180:CDS 50.0%
!!! GGTGAGGTGGTTTTGGAGTT+GGG - chr3.3:81245756-81245775 None:intergenic 50.0%
!!! GTTTTGGCTGTGAAGGAAGG+TGG + chr3.3:81246652-81246671 MS.gene013180:CDS 50.0%
AAACGGCGTCGTTGAGGGTT+TGG - chr3.3:81245850-81245869 None:intergenic 55.0%
AGAGTGAAACGGCGTCGTTG+AGG - chr3.3:81245856-81245875 None:intergenic 55.0%
AGAGTTTCCACGGTGGAGAG+TGG + chr3.3:81246247-81246266 MS.gene013180:CDS 55.0%
ATTCTTCCCACTCTCCACCG+TGG - chr3.3:81246257-81246276 None:intergenic 55.0%
ATTGCAGTGGCGCGTGATTC+TGG - chr3.3:81246088-81246107 None:intergenic 55.0%
CAGTGGAGAAATCGGTGAGG+TGG - chr3.3:81245769-81245788 None:intergenic 55.0%
CGGAAACAAATGGTGGCTGC+TGG + chr3.3:81247156-81247175 MS.gene013180:CDS 55.0%
GAGGTGAAGGGAGAGTGAGT+TGG - chr3.3:81245813-81245832 None:intergenic 55.0%
GAGTGAAACGGCGTCGTTGA+GGG - chr3.3:81245855-81245874 None:intergenic 55.0%
GAGTTTCCACGGTGGAGAGT+GGG + chr3.3:81246248-81246267 MS.gene013180:CDS 55.0%
GATGGAGTGGAGGAGGTGAA+GGG - chr3.3:81245825-81245844 None:intergenic 55.0%
GATGTTGGATGGGAAAGGCG+TGG + chr3.3:81246948-81246967 MS.gene013180:CDS 55.0%
GTCGTTGAGGGTTTGGAGGA+TGG - chr3.3:81245843-81245862 None:intergenic 55.0%
GTTACAATAGCCGTCGCGCA+AGG + chr3.3:81246148-81246167 MS.gene013180:CDS 55.0%
TCGAGTAACCGAACCAGCAC+CGG - chr3.3:81246181-81246200 None:intergenic 55.0%
TGAGGGTTTGGAGGATGGAG+TGG - chr3.3:81245838-81245857 None:intergenic 55.0%
TTTGGAGGATGGAGTGGAGG+AGG - chr3.3:81245832-81245851 None:intergenic 55.0%
! GTGAAGGGAGAGTGAGTTGG+TGG - chr3.3:81245810-81245829 None:intergenic 55.0%
!! AAGGGAGAGTGAGTTGGTGG+TGG - chr3.3:81245807-81245826 None:intergenic 55.0%
!! AGGGTTGGCTTCGTCTGGAA+CGG + chr3.3:81246564-81246583 MS.gene013180:CDS 55.0%
!! GGGTTTGTTGGGAGGGTGAT+TGG + chr3.3:81246796-81246815 MS.gene013180:CDS 55.0%
!! GTGTAGTTCCGGTGCTGGTT+CGG + chr3.3:81246170-81246189 MS.gene013180:CDS 55.0%
!!! CGGTGAGGTGGTTTTGGAGT+TGG - chr3.3:81245757-81245776 None:intergenic 55.0%
AGAAAGCGGGGGTTTCGAGG+AGG - chr3.3:81246003-81246022 None:intergenic 60.0%
CGGAACTACACCTTGCGCGA+CGG - chr3.3:81246161-81246180 None:intergenic 60.0%
CGTCGCGCAAGGTGTAGTTC+CGG + chr3.3:81246159-81246178 MS.gene013180:CDS 60.0%
GAACATCGCAGTCGGTGACG+TGG - chr3.3:81245964-81245983 None:intergenic 60.0%
GCAAGGTGTAGTTCCGGTGC+TGG + chr3.3:81246165-81246184 MS.gene013180:CDS 60.0%
GGATGGAGTGGAGGAGGTGA+AGG - chr3.3:81245826-81245845 None:intergenic 60.0%
GGCGGAACACCAGGTTCACA+AGG + chr3.3:81246454-81246473 MS.gene013180:CDS 60.0%
GGGTTTGGAGGATGGAGTGG+AGG - chr3.3:81245835-81245854 None:intergenic 60.0%
TGGAGAAAGCGGGGGTTTCG+AGG - chr3.3:81246006-81246025 None:intergenic 60.0%
TTTCGAGGAGGAGGCCGCTA+CGG - chr3.3:81245991-81246010 None:intergenic 60.0%
! GTTGGATGGGAAAGGCGTGG+AGG + chr3.3:81246951-81246970 MS.gene013180:CDS 60.0%
!! GGAGAGTGAGTTGGTGGTGG+AGG - chr3.3:81245804-81245823 None:intergenic 60.0%
!! GGGTTGGCTTCGTCTGGAAC+GGG + chr3.3:81246565-81246584 MS.gene013180:CDS 60.0%
!! GGTTGGCTTCGTCTGGAACG+GGG + chr3.3:81246566-81246585 MS.gene013180:CDS 60.0%
AAGCGGGGGTTTCGAGGAGG+AGG - chr3.3:81246000-81246019 None:intergenic 65.0%
CATCGCAGTCGGTGACGTGG+CGG - chr3.3:81245961-81245980 None:intergenic 65.0%
CGGCGTCGTTGAGGGTTTGG+AGG - chr3.3:81245847-81245866 None:intergenic 65.0%
GGTGAGGATTGCGGCTGCGA+GGG + chr3.3:81246843-81246862 MS.gene013180:CDS 65.0%
! GGCTTCGTCTGGAACGGGGT+TGG + chr3.3:81246570-81246589 MS.gene013180:CDS 65.0%
CGGTGAGGATTGCGGCTGCG+AGG + chr3.3:81246842-81246861 MS.gene013180:CDS 70.0%
GGTGACGTGGCGGTGGAGAG+TGG - chr3.3:81245951-81245970 None:intergenic 70.0%
CGCAGTCGGTGACGTGGCGG+TGG - chr3.3:81245958-81245977 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 81245623 81247287 81245623 ID=MS.gene013180
chr3.3 mRNA 81245623 81247287 81245623 ID=MS.gene013180.t1;Parent=MS.gene013180
chr3.3 exon 81245623 81247287 81245623 ID=MS.gene013180.t1.exon1;Parent=MS.gene013180.t1
chr3.3 CDS 81245623 81247287 81245623 ID=cds.MS.gene013180.t1;Parent=MS.gene013180.t1
Gene Sequence

>MS.gene013180

ATGAAGGAATCAACAACAGAAGCGGACCCTATCAGCGTTTGTCTGAACCTCACCAATTCACTCATAGAAAACGAAATCCCCACCGTCCATCACTTAAAAACCAAATGGTCAATCTTCGGAGTCAAACTAACCCAACTCCAAAACCACCTCACCGATTTCTCCACTGAATATTCCAAATCCTCCACCACCAACTCACTCTCCCTTCACCTCCTCCACTCCATCCTCCAAACCCTCAACGACGCCGTTTCACTCTCTCACCACTGTCAATCCCAAATTTTACCCCACGGTAAACTCCAAACTCAAAGCCAAATCGATTCACTTATCGCCACTCTCCACCGCCACGTCACCGACTGCGATGTTCTCTTCCGTAGCGGCCTCCTCCTCGAAACCCCCGCTTTCTCCAAACGTGAAGCCGTTCGATCTCTAACGAGAAATCTCATCGCACGGTTGCAAATCGGCTCACCAGAATCACGCGCCACTGCAATCGACTCACTCTTATCTCTTCTCAATGAAGATGATAAAAACGTTACAATAGCCGTCGCGCAAGGTGTAGTTCCGGTGCTGGTTCGGTTACTCGATTCCAGCTCCTCTGATATGAAGGAGAAAACAGTTGCTGCTATTTCGAGAGTTTCCACGGTGGAGAGTGGGAAGAATAATTTACTTGCGGAGGGGTTGTTGTTGTTGAATCATTTGGTTAGGGTTTTGGATTCGGGAAGTGGTTTAGCTATAGAGAAAGCTTGTATTGCGCTTCAGGCGTTGAGTTTGACTAGGGACAATGCTAGAGCGATTGGATCTAGAGGTGGAATTTCGTCTCTGTTAGGGATTTGTCAAGGCGGAACACCAGGTTCACAAGGTTATGCAGCAGCGGTTTTGAGGAATCTGGCTAAGTTTAATGAAATTAAGGAGAATTTCGTGGAGGAGAATGCGGTTATTGTTTTGTTAGGGTTGGCTTCGTCTGGAACGGGGTTGGCACGAGAAAATGCGATTGGTTGTGTGGCAAATTTGATTTCGGAGGATGAGAGTATGAGGGTTTTGGCTGTGAAGGAAGGTGGTGTTGAGTGTTTGAAGAATTATTGGGATTCGGTTACGATGATTCAGAGTCTTGAAGTAGGGGTTGAAATGTTGAGGTATTTGGCTATGACTGGTCCAATTGATGAGGTTTTAGTTGGTGAAGGGTTTGTTGGGAGGGTGATTGGAGTGTTGAACCGTGATGTTTTAACGGTGAGGATTGCGGCTGCGAGGGCTGTTTATGCTATGGGTTTGAATGGCGGAAATAAGACGAGAAAGGAAATGGGGGAATGTGGGTGTGTTCCTTCTTTGATTAAGATGTTGGATGGGAAAGGCGTGGAGGAGAAAGAATCTGCTGCAATGGCGTTGTCGGTGTTGTTGCAGCACCCTTTCAATAGAAGGATCTTTAGGAAGGATGAGAGGGGAATAGTGAGTGCAGTTCACCTATTGAACCCTGCTTTGGTTAATTTGGATAAGAAATACCCTGTTTCGGTTCTGGTTTCACTTTTGCATTCGAAGACTTGTCGGAAACAAATGGTGGCTGCTGGGGCTTGTGTATATACGCAGAAGCTTGTTGAGTTGGATATTCCGGGTTCAAAGAAATTGTTAGATGGACTTGGTCGTGGTAAGATTTGGGGAGTTTTTGCAAGACCCTAG
Protein sequence

>MS.gene013180.t1

MKESTTEADPISVCLNLTNSLIENEIPTVHHLKTKWSIFGVKLTQLQNHLTDFSTEYSKSSTTNSLSLHLLHSILQTLNDAVSLSHHCQSQILPHGKLQTQSQIDSLIATLHRHVTDCDVLFRSGLLLETPAFSKREAVRSLTRNLIARLQIGSPESRATAIDSLLSLLNEDDKNVTIAVAQGVVPVLVRLLDSSSSDMKEKTVAAISRVSTVESGKNNLLAEGLLLLNHLVRVLDSGSGLAIEKACIALQALSLTRDNARAIGSRGGISSLLGICQGGTPGSQGYAAAVLRNLAKFNEIKENFVEENAVIVLLGLASSGTGLARENAIGCVANLISEDESMRVLAVKEGGVECLKNYWDSVTMIQSLEVGVEMLRYLAMTGPIDEVLVGEGFVGRVIGVLNRDVLTVRIAAARAVYAMGLNGGNKTRKEMGECGCVPSLIKMLDGKGVEEKESAAMALSVLLQHPFNRRIFRKDERGIVSAVHLLNPALVNLDKKYPVSVLVSLLHSKTCRKQMVAAGACVYTQKLVELDIPGSKKLLDGLGRGKIWGVFARP