Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33842.t1 | XP_003608254.1 | 98.3 | 577 | 10 | 0 | 1 | 577 | 1 | 577 | 0.00E+00 | 1094 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33842.t1 | G7JRW0 | 98.3 | 577 | 10 | 0 | 1 | 577 | 1 | 577 | 0.0e+00 | 1094.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052564 | MS.gene33842 | 0.998251 | 6.49E-260 | -1.69E-46 |
| MS.gene052565 | MS.gene33842 | 0.997961 | 6.21E-253 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33842 | MS.gene52172 | PPI |
| MS.gene57486 | MS.gene33842 | PPI |
| MS.gene33842 | MS.gene06253 | PPI |
| MS.gene42235 | MS.gene33842 | PPI |
| MS.gene41659 | MS.gene33842 | PPI |
| MS.gene013180 | MS.gene33842 | PPI |
| MS.gene055531 | MS.gene33842 | PPI |
| MS.gene33842 | MS.gene019466 | PPI |
| MS.gene33842 | MS.gene023795 | PPI |
| MS.gene33842 | MS.gene36899 | PPI |
| MS.gene27647 | MS.gene33842 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33842.t1 | MTR_4g091320 | 98.267 | 577 | 10 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1151 |
| MS.gene33842.t1 | MTR_4g007850 | 90.683 | 161 | 12 | 1 | 417 | 577 | 365 | 522 | 1.53e-92 | 294 |
| MS.gene33842.t1 | MTR_8g032570 | 31.625 | 566 | 336 | 18 | 27 | 572 | 48 | 582 | 1.75e-67 | 229 |
| MS.gene33842.t1 | MTR_8g032570 | 31.625 | 566 | 336 | 18 | 27 | 572 | 25 | 559 | 2.08e-67 | 229 |
| MS.gene33842.t1 | MTR_7g076220 | 30.526 | 570 | 345 | 15 | 22 | 570 | 17 | 556 | 3.04e-65 | 223 |
| MS.gene33842.t1 | MTR_3g098730 | 29.050 | 537 | 356 | 14 | 38 | 567 | 29 | 547 | 2.00e-45 | 169 |
| MS.gene33842.t1 | MTR_1g018180 | 23.318 | 223 | 165 | 3 | 201 | 423 | 103 | 319 | 7.40e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33842.t1 | AT1G61350 | 60.917 | 545 | 203 | 6 | 40 | 577 | 32 | 573 | 0.0 | 645 |
| MS.gene33842.t1 | AT2G45720 | 31.449 | 566 | 339 | 15 | 22 | 572 | 20 | 551 | 2.05e-69 | 234 |
| MS.gene33842.t1 | AT2G45720 | 31.449 | 566 | 339 | 15 | 22 | 572 | 20 | 551 | 2.05e-69 | 234 |
| MS.gene33842.t1 | AT2G45720 | 31.449 | 566 | 339 | 15 | 22 | 572 | 20 | 551 | 2.05e-69 | 234 |
| MS.gene33842.t1 | AT2G45720 | 31.449 | 566 | 339 | 15 | 22 | 572 | 20 | 551 | 2.05e-69 | 234 |
| MS.gene33842.t1 | AT2G45720 | 31.449 | 566 | 339 | 15 | 22 | 572 | 20 | 551 | 2.05e-69 | 234 |
| MS.gene33842.t1 | AT5G50900 | 31.588 | 554 | 354 | 12 | 23 | 567 | 11 | 548 | 1.97e-62 | 215 |
| MS.gene33842.t1 | AT1G01830 | 28.445 | 566 | 362 | 15 | 22 | 572 | 36 | 573 | 9.26e-59 | 206 |
| MS.gene33842.t1 | AT1G01830 | 28.445 | 566 | 362 | 15 | 22 | 572 | 36 | 573 | 9.26e-59 | 206 |
| MS.gene33842.t1 | AT1G01830 | 28.445 | 566 | 362 | 15 | 22 | 572 | 36 | 573 | 9.26e-59 | 206 |
| MS.gene33842.t1 | AT2G05810 | 29.853 | 546 | 358 | 16 | 38 | 571 | 40 | 572 | 1.24e-52 | 189 |
| MS.gene33842.t1 | AT2G05810 | 29.853 | 546 | 358 | 16 | 38 | 571 | 40 | 572 | 1.24e-52 | 189 |
| MS.gene33842.t1 | AT4G16490 | 24.451 | 319 | 217 | 8 | 143 | 447 | 157 | 465 | 7.80e-12 | 68.2 |
Find 0 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTAAGTATTTTAATGAGTTA+TGG | - | 33320:6411-6430 | MS.gene33842:CDS | 20.0% |
| ! | TTGCTATATTATGTTCGAAA+TGG | - | 33320:6447-6466 | MS.gene33842:CDS | 25.0% |
| !!! | CTGGTTTTGATTCATATAAA+GGG | - | 33320:5881-5900 | MS.gene33842:CDS | 25.0% |
| !!! | TGGTTTTGATTCATATAAAG+GGG | - | 33320:5882-5901 | MS.gene33842:CDS | 25.0% |
| !!! | TTTAATGAGTTATGGTTTTG+TGG | - | 33320:6419-6438 | MS.gene33842:CDS | 25.0% |
| AAACAAAGGAAATAGCAATG+AGG | - | 33320:6352-6371 | MS.gene33842:CDS | 30.0% | |
| AAAGTGGCATTTAGATTATC+TGG | - | 33320:6498-6517 | MS.gene33842:CDS | 30.0% | |
| AACAAAGGAAATAGCAATGA+GGG | - | 33320:6353-6372 | MS.gene33842:CDS | 30.0% | |
| AGGAAAAAGATTGTTAGTTC+TGG | - | 33320:6792-6811 | MS.gene33842:CDS | 30.0% | |
| ATGTAGTTCATGTTCTTGTT+GGG | - | 33320:5797-5816 | MS.gene33842:CDS | 30.0% | |
| CTAAAATACGTAACAAAGCA+CGG | + | 33320:6308-6327 | MS.gene33842:intergenic | 30.0% | |
| GATAAATTCTGCCATAAAAC+CGG | + | 33320:6559-6578 | MS.gene33842:intergenic | 30.0% | |
| GTCATATTCTTCGAAAACAA+AGG | - | 33320:6338-6357 | MS.gene33842:CDS | 30.0% | |
| TGAAGTTTCGATTCAAGAAT+TGG | - | 33320:6470-6489 | MS.gene33842:CDS | 30.0% | |
| TTCATTCAGAATATTGCCTT+TGG | - | 33320:6240-6259 | MS.gene33842:CDS | 30.0% | |
| TTCGAAGAATATGACCATTT+CGG | + | 33320:6333-6352 | MS.gene33842:intergenic | 30.0% | |
| ! | AAGGTGTTTGATGAAATTGA+CGG | - | 33320:5984-6003 | MS.gene33842:CDS | 30.0% |
| ! | ACAAACCTCTTTCTATTTCT+AGG | + | 33320:6654-6673 | MS.gene33842:intergenic | 30.0% |
| !! | TACGTATTTTAGATCCGAAA+TGG | - | 33320:6316-6335 | MS.gene33842:CDS | 30.0% |
| !! | TGCTAGTTTGTCTATGTTTT+TGG | + | 33320:6823-6842 | MS.gene33842:intergenic | 30.0% |
| !!! | GCTGGTTTTGATTCATATAA+AGG | - | 33320:5880-5899 | MS.gene33842:CDS | 30.0% |
| AGATTCCATTCAACATACTG+CGG | + | 33320:6905-6924 | MS.gene33842:intergenic | 35.0% | |
| CAATTCAGGTGAACTCAATT+GGG | - | 33320:6217-6236 | MS.gene33842:CDS | 35.0% | |
| CATTGCTTTCTTAGCTTCTT+CGG | + | 33320:6529-6548 | MS.gene33842:intergenic | 35.0% | |
| CTTTCGGAGATTTATAGAAC+GGG | - | 33320:5571-5590 | MS.gene33842:CDS | 35.0% | |
| GAAGAAGCTAAGAAAGCAAT+GGG | - | 33320:6528-6547 | MS.gene33842:CDS | 35.0% | |
| GATGAAATTGACGGAGAATT+CGG | - | 33320:5993-6012 | MS.gene33842:CDS | 35.0% | |
| GATGTAGTTCATGTTCTTGT+TGG | - | 33320:5796-5815 | MS.gene33842:CDS | 35.0% | |
| GCTTTCGGAGATTTATAGAA+CGG | - | 33320:5570-5589 | MS.gene33842:CDS | 35.0% | |
| GTATGAAGAAACAAGCTTTG+AGG | - | 33320:5710-5729 | MS.gene33842:CDS | 35.0% | |
| GTGGGAATGATGAATGTAAA+GGG | - | 33320:6070-6089 | MS.gene33842:CDS | 35.0% | |
| TGATGAATGTAAAGGGGATT+TGG | - | 33320:6077-6096 | MS.gene33842:CDS | 35.0% | |
| TGGGAATGATGAATGTAAAG+GGG | - | 33320:6071-6090 | MS.gene33842:CDS | 35.0% | |
| TGGTACCTAGAAATAGAAAG+AGG | - | 33320:6646-6665 | MS.gene33842:CDS | 35.0% | |
| TGTGGGAATGATGAATGTAA+AGG | - | 33320:6069-6088 | MS.gene33842:CDS | 35.0% | |
| TTTCGGAGATTTATAGAACG+GGG | - | 33320:5572-5591 | MS.gene33842:CDS | 35.0% | |
| ! | AGGATGAAGATTGGTGATTT+GGG | - | 33320:5688-5707 | MS.gene33842:CDS | 35.0% |
| ! | ATCATTTGAAGTTCGCGAAA+TGG | - | 33320:6596-6615 | MS.gene33842:CDS | 35.0% |
| ! | CATGTTCTTGTTGGGTTTTT+GGG | - | 33320:5805-5824 | MS.gene33842:CDS | 35.0% |
| ! | TCATGTTCTTGTTGGGTTTT+TGG | - | 33320:5804-5823 | MS.gene33842:CDS | 35.0% |
| ! | TGAGGATGAGAAGTATGTTA+AGG | - | 33320:5753-5772 | MS.gene33842:CDS | 35.0% |
| !! | AATTCAAGAAGAGAGTGCTA+AGG | - | 33320:5843-5862 | MS.gene33842:CDS | 35.0% |
| !! | ATTTTGACGAGGATGAAGAT+TGG | - | 33320:5679-5698 | MS.gene33842:CDS | 35.0% |
| !! | TCAAGAATTGGCTTTGAAAG+TGG | - | 33320:6482-6501 | MS.gene33842:CDS | 35.0% |
| !!! | ACGAATAAGTTGCCATTTTC+CGG | + | 33320:5332-5351 | MS.gene33842:intergenic | 35.0% |
| !!! | ATGTGAGAGATATTTTGACG+AGG | - | 33320:5668-5687 | MS.gene33842:CDS | 35.0% |
| AAGCTTGAAGAGCTTCATTC+GGG | - | 33320:5355-5374 | MS.gene33842:CDS | 40.0% | |
| ACGGCGTTGTTGAATATTTG+TGG | - | 33320:6051-6070 | MS.gene33842:CDS | 40.0% | |
| AGATTCCGCAGTATGTTGAA+TGG | - | 33320:6897-6916 | MS.gene33842:CDS | 40.0% | |
| AGGCAAATGGTGATTAGAGA+AGG | - | 33320:6276-6295 | MS.gene33842:CDS | 40.0% | |
| ATCGAAAGAGGAAGCAATTC+AGG | - | 33320:6203-6222 | MS.gene33842:CDS | 40.0% | |
| ATGGGTGATGAAGAGTTAAC+CGG | - | 33320:5202-5221 | MS.gene33842:CDS | 40.0% | |
| CAAATGGTGATTAGAGAAGG+TGG | - | 33320:6279-6298 | MS.gene33842:CDS | 40.0% | |
| CAAGCTTGAAGAGCTTCATT+CGG | - | 33320:5354-5373 | MS.gene33842:CDS | 40.0% | |
| CAATTGCTTGATCCAGAAGA+GGG | - | 33320:6705-6724 | MS.gene33842:CDS | 40.0% | |
| CGAAGAAGCTAAGAAAGCAA+TGG | - | 33320:6527-6546 | MS.gene33842:CDS | 40.0% | |
| CGGCGTTGTTGAATATTTGT+GGG | - | 33320:6052-6071 | MS.gene33842:CDS | 40.0% | |
| GCAATTCAGGTGAACTCAAT+TGG | - | 33320:6216-6235 | MS.gene33842:CDS | 40.0% | |
| GCAGTATGTTGAATGGAATC+TGG | - | 33320:6904-6923 | MS.gene33842:CDS | 40.0% | |
| GGAGAATTCGGATAATGCTT+GGG | - | 33320:6005-6024 | MS.gene33842:CDS | 40.0% | |
| GGTAACTTCAATAGTAGCGA+CGG | - | 33320:5432-5451 | MS.gene33842:CDS | 40.0% | |
| GGTTAAGAGGTTTATGGTTG+AGG | - | 33320:6146-6165 | MS.gene33842:CDS | 40.0% | |
| GTGCTTGTAAAGAGGATATG+AGG | - | 33320:5641-5660 | MS.gene33842:CDS | 40.0% | |
| TAAGAGGTTTATGGTTGAGG+AGG | - | 33320:6149-6168 | MS.gene33842:CDS | 40.0% | |
| TCTTTACAAGCACCAAGACA+CGG | + | 33320:5634-5653 | MS.gene33842:intergenic | 40.0% | |
| TGACAAGTTGCAATAGTGCA+AGG | - | 33320:6772-6791 | MS.gene33842:CDS | 40.0% | |
| TGAGGAGGTTAAGAGGTTTA+TGG | - | 33320:6140-6159 | MS.gene33842:CDS | 40.0% | |
| TGGTTTAGCGAAGAAGCTTT+CGG | - | 33320:5555-5574 | MS.gene33842:CDS | 40.0% | |
| TTACCTGAATTTCCCTCTTC+TGG | + | 33320:6720-6739 | MS.gene33842:intergenic | 40.0% | |
| ! | AAGGTTGTTTGTGTTGTTGC+TGG | - | 33320:5862-5881 | MS.gene33842:CDS | 40.0% |
| ! | GAATGTAAAGGGGATTTGGT+TGG | - | 33320:6081-6100 | MS.gene33842:CDS | 40.0% |
| ! | GAGGATGAAGATTGGTGATT+TGG | - | 33320:5687-5706 | MS.gene33842:CDS | 40.0% |
| ! | GCTTTTGATGCAGAGTGATT+TGG | - | 33320:5510-5529 | MS.gene33842:CDS | 40.0% |
| ! | GTTGTTTCAAAACCGTGTCT+TGG | - | 33320:5619-5638 | MS.gene33842:CDS | 40.0% |
| ! | TATTGCCTTTGGAGATGAGT+TGG | - | 33320:6251-6270 | MS.gene33842:CDS | 40.0% |
| ! | TCTTCTTGAGGTTGTTGTTG+AGG | - | 33320:5735-5754 | MS.gene33842:CDS | 40.0% |
| !! | AAATCTTGTTGGTGTTGAGG+AGG | - | 33320:6125-6144 | MS.gene33842:CDS | 40.0% |
| !! | AGAACGGGGATTTTGACAAA+TGG | - | 33320:5586-5605 | MS.gene33842:CDS | 40.0% |
| !! | AGATGAGTTGGTTAGGCAAA+TGG | - | 33320:6263-6282 | MS.gene33842:CDS | 40.0% |
| !! | AGCTTTGAGGAATCTTCTTG+AGG | - | 33320:5723-5742 | MS.gene33842:CDS | 40.0% |
| !! | GAACGGGGATTTTGACAAAT+GGG | - | 33320:5587-5606 | MS.gene33842:CDS | 40.0% |
| !! | GAGAAATCTTGTTGGTGTTG+AGG | - | 33320:6122-6141 | MS.gene33842:CDS | 40.0% |
| !! | GCGTTGATTTCTCGTATAGT+GGG | - | 33320:5485-5504 | MS.gene33842:CDS | 40.0% |
| !! | TGCGTTGATTTCTCGTATAG+TGG | - | 33320:5484-5503 | MS.gene33842:CDS | 40.0% |
| !!! | AAAGGGGTTTTGATTAGTGC+CGG | - | 33320:5898-5917 | MS.gene33842:CDS | 40.0% |
| !!! | GTTTTTGGGTTCTAATGAGG+TGG | - | 33320:5819-5838 | MS.gene33842:CDS | 40.0% |
| !!! | TGGGTTTTTGGGTTCTAATG+AGG | - | 33320:5816-5835 | MS.gene33842:CDS | 40.0% |
| AAGAAAGCAATGGGAGATGC+CGG | - | 33320:6537-6556 | MS.gene33842:CDS | 45.0% | |
| CAATCCAAAACCCGGATCAA+AGG | + | 33320:5934-5953 | MS.gene33842:intergenic | 45.0% | |
| CAGGCTTGTGAAATCGAAAG+AGG | - | 33320:6191-6210 | MS.gene33842:CDS | 45.0% | |
| CATACTGCGGAATCTGTTTG+TGG | + | 33320:6892-6911 | MS.gene33842:intergenic | 45.0% | |
| CCTAACCAACTCATCTCCAA+AGG | + | 33320:6259-6278 | MS.gene33842:intergenic | 45.0% | |
| CGGAGAATTCGGATAATGCT+TGG | - | 33320:6004-6023 | MS.gene33842:CDS | 45.0% | |
| GATCCAGAAGAGGGAAATTC+AGG | - | 33320:6714-6733 | MS.gene33842:CDS | 45.0% | |
| GCAATTGCTTGATCCAGAAG+AGG | - | 33320:6704-6723 | MS.gene33842:CDS | 45.0% | |
| GGATAATGCTTGGGCTGTTT+CGG | - | 33320:6014-6033 | MS.gene33842:CDS | 45.0% | |
| GTGTTATCGCACCTTTGATC+CGG | - | 33320:5920-5939 | MS.gene33842:CDS | 45.0% | |
| GTTAACCGGAGAATCTCAAC+TGG | - | 33320:5216-5235 | MS.gene33842:CDS | 45.0% | |
| TGTTATCGCACCTTTGATCC+GGG | - | 33320:5921-5940 | MS.gene33842:CDS | 45.0% | |
| TTCAATAGTAGCGACGGTGA+AGG | - | 33320:5438-5457 | MS.gene33842:CDS | 45.0% | |
| TTCTCTTACGCTCTCGATCA+GGG | - | 33320:5300-5319 | MS.gene33842:CDS | 45.0% | |
| TTGGATTGTGGGAGTGAGTT+GGG | - | 33320:5946-5965 | MS.gene33842:CDS | 45.0% | |
| TTTCTCTTACGCTCTCGATC+AGG | - | 33320:5299-5318 | MS.gene33842:CDS | 45.0% | |
| TTTGGATTGTGGGAGTGAGT+TGG | - | 33320:5945-5964 | MS.gene33842:CDS | 45.0% | |
| ! | ATGCTGTGTCGACGTTTATC+AGG | - | 33320:6172-6191 | MS.gene33842:CDS | 45.0% |
| ! | ATTTGGTTGGTCCTGCTTGT+GGG | - | 33320:6094-6113 | MS.gene33842:CDS | 45.0% |
| ! | GATCAAAGGTGCGATAACAC+CGG | + | 33320:5920-5939 | MS.gene33842:intergenic | 45.0% |
| !! | CCTTTGGAGATGAGTTGGTT+AGG | - | 33320:6256-6275 | MS.gene33842:CDS | 45.0% |
| !! | GGGGTGTTGAGAAATCTTGT+TGG | - | 33320:6114-6133 | MS.gene33842:CDS | 45.0% |
| !! | GTGTCTTGGTGCTTGTAAAG+AGG | - | 33320:5633-5652 | MS.gene33842:CDS | 45.0% |
| !! | TTGGTGTTGAGGAGGTTAAG+AGG | - | 33320:6133-6152 | MS.gene33842:CDS | 45.0% |
| !!! | AATGGGAGATGCCGGTTTTA+TGG | - | 33320:6545-6564 | MS.gene33842:CDS | 45.0% |
| !!! | TGATCCGGGTTTTGGATTGT+GGG | - | 33320:5935-5954 | MS.gene33842:CDS | 45.0% |
| !!! | TTGATCCGGGTTTTGGATTG+TGG | - | 33320:5934-5953 | MS.gene33842:CDS | 45.0% |
| AAATGAGCTCCAAAGCTCGC+CGG | + | 33320:5270-5289 | MS.gene33842:intergenic | 50.0% | |
| CACTCCCACAATCCAAAACC+CGG | + | 33320:5942-5961 | MS.gene33842:intergenic | 50.0% | |
| CTCGCCGGAATCACTATTCT+CGG | + | 33320:5392-5411 | MS.gene33842:intergenic | 50.0% | |
| GTAGCGTTTGCGAAACTCGA+TGG | - | 33320:5535-5554 | MS.gene33842:CDS | 50.0% | |
| GTTACCAACCTCGAAAGCGA+CGG | + | 33320:5418-5437 | MS.gene33842:intergenic | 50.0% | |
| TGGATTGTGGGAGTGAGTTG+GGG | - | 33320:5947-5966 | MS.gene33842:CDS | 50.0% | |
| TTTCTCAACACCCCACAAGC+AGG | + | 33320:6108-6127 | MS.gene33842:intergenic | 50.0% | |
| ! | GAGTGAGTTGGGGAAAGTTG+CGG | - | 33320:5957-5976 | MS.gene33842:CDS | 50.0% |
| ! | GATTTGGTTGGTCCTGCTTG+TGG | - | 33320:6093-6112 | MS.gene33842:CDS | 50.0% |
| ! | TTTGGTTGGTCCTGCTTGTG+GGG | - | 33320:6095-6114 | MS.gene33842:CDS | 50.0% |
| !! | GTGAAGGAGTGTCACGATCT+GGG | - | 33320:5454-5473 | MS.gene33842:CDS | 50.0% |
| ACCGGAGAATCTCAACTGGC+CGG | - | 33320:5220-5239 | MS.gene33842:CDS | 55.0% | |
| GCCGCCGAGAATAGTGATTC+CGG | - | 33320:5385-5404 | MS.gene33842:CDS | 55.0% | |
| GCCGGAATCACTATTCTCGG+CGG | + | 33320:5389-5408 | MS.gene33842:intergenic | 55.0% | |
| GGCACTCTCTGGTATGGTCT+TGG | - | 33320:6626-6645 | MS.gene33842:CDS | 55.0% | |
| TCAGGGTCTTCGCCGGAAAA+TGG | - | 33320:5317-5336 | MS.gene33842:CDS | 55.0% | |
| TCCGGCCAGTTGAGATTCTC+CGG | + | 33320:5224-5243 | MS.gene33842:intergenic | 55.0% | |
| ! | CGCACCTTTGATCCGGGTTT+TGG | - | 33320:5927-5946 | MS.gene33842:CDS | 55.0% |
| ! | GAATCCGTCGCTTTCGAGGT+TGG | - | 33320:5411-5430 | MS.gene33842:CDS | 55.0% |
| ! | TTCGGCTCATGGTGGTGTCA+CGG | - | 33320:6032-6051 | MS.gene33842:CDS | 55.0% |
| !! | GACCATACCAGAGAGTGCCT+CGG | + | 33320:6625-6644 | MS.gene33842:intergenic | 55.0% |
| !! | GGTGAAGGAGTGTCACGATC+TGG | - | 33320:5453-5472 | MS.gene33842:CDS | 55.0% |
| AGTTCGCGAAATGGCAGCCG+AGG | - | 33320:6605-6624 | MS.gene33842:CDS | 60.0% | |
| CTCTCGATCAGGGTCTTCGC+CGG | - | 33320:5310-5329 | MS.gene33842:CDS | 60.0% | |
| TGGGGAAAGTTGCGGCTGCA+AGG | - | 33320:5965-5984 | MS.gene33842:CDS | 60.0% | |
| ! | AGCCGAGGCACTCTCTGGTA+TGG | - | 33320:6620-6639 | MS.gene33842:CDS | 60.0% |
| ! | CGAAAGCGACGGATTCTCGC+CGG | + | 33320:5407-5426 | MS.gene33842:intergenic | 60.0% |
| ! | GCGAGAATCCGTCGCTTTCG+AGG | - | 33320:5407-5426 | MS.gene33842:CDS | 60.0% |
| ! | GCTTGGGCTGTTTCGGCTCA+TGG | - | 33320:6021-6040 | MS.gene33842:CDS | 60.0% |
| ! | TGGGCTGTTTCGGCTCATGG+TGG | - | 33320:6024-6043 | MS.gene33842:CDS | 60.0% |
| CAACTGGCCGGAGTTCCCAC+CGG | - | 33320:5232-5251 | MS.gene33842:CDS | 65.0% | |
| GCAAGCTCCGGTGGGAACTC+CGG | + | 33320:5242-5261 | MS.gene33842:intergenic | 65.0% | |
| GCTCCAAAGCTCGCCGGAGT+CGG | + | 33320:5264-5283 | MS.gene33842:intergenic | 65.0% | |
| ! | ATGGCAGCCGAGGCACTCTC+TGG | - | 33320:6615-6634 | MS.gene33842:CDS | 65.0% |
| !! | TTGCCGACTCCGGCGAGCTT+TGG | - | 33320:5258-5277 | MS.gene33842:CDS | 65.0% |
| CGGAGTCGGCAAGCTCCGGT+GGG | + | 33320:5250-5269 | MS.gene33842:intergenic | 70.0% | |
| TCGCCGGAGTCGGCAAGCTC+CGG | + | 33320:5254-5273 | MS.gene33842:intergenic | 70.0% | |
| !! | CCACCGGAGCTTGCCGACTC+CGG | - | 33320:5248-5267 | MS.gene33842:CDS | 70.0% |
| CCGGAGTCGGCAAGCTCCGG+TGG | + | 33320:5251-5270 | MS.gene33842:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 33320 | gene | 5202 | 6938 | 5202 | ID=MS.gene33842 |
| 33320 | mRNA | 5202 | 6938 | 5202 | ID=MS.gene33842.t1;Parent=MS.gene33842 |
| 33320 | exon | 5202 | 6938 | 5202 | ID=MS.gene33842.t1.exon1;Parent=MS.gene33842.t1 |
| 33320 | CDS | 5202 | 6938 | 5202 | ID=cds.MS.gene33842.t1;Parent=MS.gene33842.t1 |
| Gene Sequence |
| Protein sequence |
