Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014578.t1 | XP_003603670.1 | 100 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 3.10E-263 | 917.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014578.t1 | P46259 | 98.9 | 452 | 4 | 1 | 1 | 451 | 1 | 452 | 6.5e-262 | 904.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014578.t1 | G7J421 | 100.0 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 2.2e-263 | 917.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014578.t1 | MTR_3g110720 | 100.000 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 0.0 | 939 |
| MS.gene014578.t1 | MTR_4g097830 | 97.118 | 451 | 13 | 0 | 1 | 451 | 1 | 451 | 0.0 | 914 |
| MS.gene014578.t1 | MTR_1g106005 | 97.550 | 449 | 11 | 0 | 1 | 449 | 1 | 449 | 0.0 | 914 |
| MS.gene014578.t1 | MTR_8g085980 | 92.874 | 435 | 31 | 0 | 1 | 435 | 1 | 435 | 0.0 | 834 |
| MS.gene014578.t1 | MTR_7g085800 | 91.403 | 442 | 38 | 0 | 1 | 442 | 1 | 442 | 0.0 | 829 |
| MS.gene014578.t1 | MTR_6g029190 | 83.628 | 452 | 69 | 3 | 1 | 451 | 1 | 448 | 0.0 | 774 |
| MS.gene014578.t1 | MTR_2g041670 | 73.942 | 449 | 112 | 2 | 1 | 449 | 1 | 444 | 0.0 | 662 |
| MS.gene014578.t1 | MTR_2g041400 | 75.291 | 429 | 101 | 2 | 1 | 429 | 1 | 424 | 0.0 | 646 |
| MS.gene014578.t1 | MTR_4g094535 | 42.166 | 434 | 241 | 2 | 1 | 434 | 1 | 424 | 1.08e-125 | 372 |
| MS.gene014578.t1 | MTR_8g107250 | 41.372 | 452 | 254 | 3 | 1 | 450 | 1 | 443 | 1.12e-125 | 372 |
| MS.gene014578.t1 | MTR_4g017630 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 4.11e-125 | 371 |
| MS.gene014578.t1 | MTR_4g019110 | 42.396 | 434 | 240 | 2 | 1 | 434 | 1 | 424 | 1.78e-124 | 369 |
| MS.gene014578.t1 | MTR_4g019090 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 2.46e-124 | 369 |
| MS.gene014578.t1 | MTR_1g101130 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 6.06e-124 | 368 |
| MS.gene014578.t1 | MTR_2g031310 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 6.55e-124 | 367 |
| MS.gene014578.t1 | MTR_7g089120 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 1.43e-123 | 367 |
| MS.gene014578.t1 | MTR_3g113970 | 40.503 | 437 | 246 | 3 | 1 | 434 | 1 | 426 | 5.85e-123 | 365 |
| MS.gene014578.t1 | MTR_8g098360 | 39.545 | 440 | 256 | 2 | 1 | 440 | 1 | 430 | 4.22e-122 | 363 |
| MS.gene014578.t1 | MTR_3g063410 | 97.403 | 154 | 4 | 0 | 252 | 405 | 24 | 177 | 5.14e-110 | 323 |
| MS.gene014578.t1 | MTR_3g063410 | 97.101 | 138 | 4 | 0 | 268 | 405 | 1 | 138 | 3.76e-96 | 286 |
| MS.gene014578.t1 | MTR_7g117050 | 31.614 | 446 | 282 | 9 | 2 | 433 | 3 | 439 | 1.29e-76 | 247 |
| MS.gene014578.t1 | MTR_6g075280 | 42.553 | 94 | 35 | 1 | 355 | 448 | 608 | 682 | 1.30e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014578.t1 | AT4G14960 | 97.105 | 449 | 13 | 0 | 1 | 449 | 1 | 449 | 0.0 | 913 |
| MS.gene014578.t1 | AT1G04820 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
| MS.gene014578.t1 | AT1G50010 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
| MS.gene014578.t1 | AT5G19780 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
| MS.gene014578.t1 | AT5G19770 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
| MS.gene014578.t1 | AT1G64740 | 90.345 | 435 | 42 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| MS.gene014578.t1 | AT4G14960 | 94.103 | 407 | 17 | 1 | 1 | 407 | 1 | 400 | 0.0 | 800 |
| MS.gene014578.t1 | AT1G75780 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.56e-126 | 374 |
| MS.gene014578.t1 | AT5G62700 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.78e-125 | 371 |
| MS.gene014578.t1 | AT5G62690 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.78e-125 | 371 |
| MS.gene014578.t1 | AT1G20010 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.13e-124 | 370 |
| MS.gene014578.t1 | AT2G29550 | 41.270 | 441 | 249 | 2 | 1 | 441 | 1 | 431 | 1.82e-124 | 369 |
| MS.gene014578.t1 | AT5G12250 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 2.34e-124 | 369 |
| MS.gene014578.t1 | AT4G20890 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 5.35e-124 | 368 |
| MS.gene014578.t1 | AT5G23860 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.55e-124 | 368 |
| MS.gene014578.t1 | AT5G23860 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.55e-124 | 368 |
| MS.gene014578.t1 | AT5G44340 | 41.705 | 434 | 243 | 3 | 1 | 434 | 1 | 424 | 4.99e-122 | 363 |
| MS.gene014578.t1 | AT5G05620 | 32.287 | 446 | 279 | 9 | 2 | 433 | 3 | 439 | 5.54e-78 | 250 |
| MS.gene014578.t1 | AT3G61650 | 31.839 | 446 | 281 | 9 | 2 | 433 | 3 | 439 | 1.12e-76 | 247 |
Find 148 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCGTTTATCTGTTGATTA+TGG | 0.257743 | 3.3:-91681181 | MS.gene014578:CDS |
| TACCGGTCTGCAAGGTTTCT+TGG | 0.265637 | 3.3:-91681257 | MS.gene014578:CDS |
| ACTGCCTCTTTGAGGTTTGA+TGG | 0.279194 | 3.3:-91680767 | MS.gene014578:CDS |
| AATGGTCCTCTTGGTCTTGA+TGG | 0.297222 | 3.3:+91680481 | None:intergenic |
| GGCGCGTGGAACATGCTTTC+CGG | 0.314398 | 3.3:+91681574 | None:intergenic |
| CATCCCTCACTGCCTCTTTG+AGG | 0.314555 | 3.3:-91680775 | MS.gene014578:CDS |
| CAGCCTCCAACTGTTGTTCC+TGG | 0.314809 | 3.3:-91680410 | MS.gene014578:CDS |
| TGGTGGAACCGGATCTGGTT+TGG | 0.315781 | 3.3:-91681218 | MS.gene014578:CDS |
| GGTGGAACCGGATCTGGTTT+GGG | 0.317975 | 3.3:-91681217 | MS.gene014578:CDS |
| TTTGTTGATTGGTGTCCAAC+TGG | 0.322748 | 3.3:-91680455 | MS.gene014578:CDS |
| TTGCCGCTGATGAGTTGTTC+AGG | 0.339225 | 3.3:+91681482 | None:intergenic |
| TACAGTTATCTGCTAGCTTT+CGG | 0.351362 | 3.3:+91681278 | None:intergenic |
| AACACGTTCTTCAGCGAAAC+CGG | 0.359208 | 3.3:-91681599 | MS.gene014578:CDS |
| CCTCAATCGCCTTGTCTCTC+AGG | 0.383066 | 3.3:-91680966 | MS.gene014578:intron |
| CTGCCTTGAACACGGCATTC+AGG | 0.391474 | 3.3:-91681797 | MS.gene014578:intron |
| CGGTCTTGTCTCCAGGCATC+TGG | 0.396008 | 3.3:+91681645 | None:intergenic |
| TCTCCAGGCATCTGGCCATC+AGG | 0.405017 | 3.3:+91681653 | None:intergenic |
| TGGTTTGGGTTCTCTTCTGT+TGG | 0.405165 | 3.3:-91681203 | MS.gene014578:CDS |
| CAGCAACAGAAAGCTGTTCA+TGG | 0.409667 | 3.3:+91680636 | None:intergenic |
| GCCTTCTCAGCAGAGATAAC+AGG | 0.413340 | 3.3:+91680662 | None:intergenic |
| CAGCCTGATGGCCAGATGCC+TGG | 0.419485 | 3.3:-91681656 | MS.gene014578:CDS |
| CCTCCAACGGTCTTGTCTCC+AGG | 0.420149 | 3.3:+91681638 | None:intergenic |
| GTGGGTGGTGGAACCGGATC+TGG | 0.423776 | 3.3:-91681223 | MS.gene014578:CDS |
| TTACCTGAATGCCGTGTTCA+AGG | 0.426104 | 3.3:+91681794 | None:intergenic |
| GAGGAGGTTGGTGCTGAGTC+TGG | 0.430544 | 3.3:-91680185 | MS.gene014578:CDS |
| GGACCATTCAGTTTGTTGAT+TGG | 0.433267 | 3.3:-91680466 | MS.gene014578:CDS |
| TTCTTGGTGTTCAATGCTGT+GGG | 0.434584 | 3.3:-91681241 | MS.gene014578:CDS |
| TGGAACATGCTTTCCGGCAC+CGG | 0.438085 | 3.3:+91681580 | None:intergenic |
| AGATCATGCACACAGCCCTT+TGG | 0.440237 | 3.3:+91680369 | None:intergenic |
| GTGTTCAATGCTGTGGGTGG+TGG | 0.440766 | 3.3:-91681235 | MS.gene014578:CDS |
| CAGTGTGCTCAAGGAGGGAA+TGG | 0.443924 | 3.3:+91681071 | None:intergenic |
| TTGGTATGTTGGTGAGGGTA+TGG | 0.447387 | 3.3:-91680264 | MS.gene014578:CDS |
| GCGATTGAGGTTGGTGTAAG+TGG | 0.449517 | 3.3:+91680979 | None:intergenic |
| AATGCTGTGGGTGGTGGAAC+CGG | 0.451993 | 3.3:-91681229 | MS.gene014578:CDS |
| ATCAAACTTATGATCAATCC+TGG | 0.453188 | 3.3:+91680316 | None:intergenic |
| GGTTGAAAGGACACTGTTGT+AGG | 0.458409 | 3.3:+91681093 | None:intergenic |
| ACGCGCCGTCTTCGTAGATC+TGG | 0.458537 | 3.3:-91681558 | MS.gene014578:CDS |
| AACAAACTGAATGGTCCTCT+TGG | 0.460464 | 3.3:+91680472 | None:intergenic |
| TCCAGGTCGGAAATGCCTGC+TGG | 0.462149 | 3.3:-91681828 | MS.gene014578:CDS |
| TGCCGCTGATGAGTTGTTCA+GGG | 0.465671 | 3.3:+91681483 | None:intergenic |
| GGCATTTCCGACCTGGATAC+CGG | 0.466918 | 3.3:+91681834 | None:intergenic |
| CCCAGCAGGCATTTCCGACC+TGG | 0.472516 | 3.3:+91681827 | None:intergenic |
| GAAAGCATGAAATGGATCCT+AGG | 0.478017 | 3.3:+91680695 | None:intergenic |
| CCTGAGAGACAAGGCGATTG+AGG | 0.482372 | 3.3:+91680966 | None:intergenic |
| ATGACCACGGGCGAAGTTGT+TGG | 0.484462 | 3.3:+91681448 | None:intergenic |
| GCACACAGCCCTTTGGACCT+TGG | 0.485066 | 3.3:+91680376 | None:intergenic |
| CATTGGTCAAGCCGGTATCC+AGG | 0.488348 | 3.3:-91681845 | MS.gene014578:CDS |
| CGTACGAGGAAAGCATGAAA+TGG | 0.493705 | 3.3:+91680687 | None:intergenic |
| TGCTCTCGAGAAGGATTATG+AGG | 0.493974 | 3.3:-91680204 | MS.gene014578:CDS |
| GGTGATGGAGATGATGTTGA+TGG | 0.495196 | 3.3:-91680164 | MS.gene014578:CDS |
| GTCATTGACGAAGTCAGAAC+CGG | 0.497007 | 3.3:-91681527 | MS.gene014578:CDS |
| GAGGTAGAAACCTGGGGAGA+TGG | 0.498412 | 3.3:+91681127 | None:intergenic |
| GTGCATTGGTATGTTGGTGA+GGG | 0.501347 | 3.3:-91680269 | MS.gene014578:CDS |
| TTTCTTGGTGTTCAATGCTG+TGG | 0.502010 | 3.3:-91681242 | MS.gene014578:CDS |
| CTGACTTCGTCAATGACGGT+TGG | 0.504857 | 3.3:+91681533 | None:intergenic |
| TACCGTTTATCCATCTCCCC+AGG | 0.505210 | 3.3:-91681137 | MS.gene014578:CDS |
| AAGAGAACCCAAACCAGATC+CGG | 0.505914 | 3.3:+91681210 | None:intergenic |
| TTCTTCAGCGAAACCGGTGC+CGG | 0.513072 | 3.3:-91681593 | MS.gene014578:CDS |
| CCCTCGCCATGGAAAATACA+TGG | 0.514501 | 3.3:-91680564 | MS.gene014578:CDS |
| CCAATGCACAAAAGCACGCT+TGG | 0.520245 | 3.3:+91680283 | None:intergenic |
| AAGCTATCTATGACATATGC+AGG | 0.524385 | 3.3:-91681024 | MS.gene014578:CDS |
| GGTTCTGACTTCGTCAATGA+CGG | 0.528328 | 3.3:+91681529 | None:intergenic |
| AACCTGGGGAGATGGATAAA+CGG | 0.532949 | 3.3:+91681135 | None:intergenic |
| AGGGTCACACTTAGCCATCA+TGG | 0.532951 | 3.3:+91680583 | None:intergenic |
| AACAGAGTTTCAAACCAACT+TGG | 0.533094 | 3.3:-91680726 | MS.gene014578:CDS |
| CACTTAGCCATCATGGAAGA+AGG | 0.536043 | 3.3:+91680590 | None:intergenic |
| AGAAGGTTCAAAAGCACTGT+TGG | 0.538677 | 3.3:+91680607 | None:intergenic |
| CCGCGGTGATGTTGTGCCTA+AGG | 0.540342 | 3.3:-91680525 | MS.gene014578:CDS |
| GTGATCTTGCCAAGGTCCAA+AGG | 0.540632 | 3.3:-91680385 | MS.gene014578:CDS |
| ATGAAATGGATCCTAGGGTA+AGG | 0.544980 | 3.3:+91680701 | None:intergenic |
| CCAGGTCGGAAATGCCTGCT+GGG | 0.545543 | 3.3:-91681827 | MS.gene014578:CDS |
| GTTCAGGGTGGAAGAGTTGA+CGG | 0.545624 | 3.3:+91681498 | None:intergenic |
| GTTGGTGAGGGTATGGAAGA+AGG | 0.547203 | 3.3:-91680257 | MS.gene014578:CDS |
| TCCTGGTGGTGATCTTGCCA+AGG | 0.548720 | 3.3:-91680393 | MS.gene014578:CDS |
| TTGTTGATTGGTGTCCAACT+GGG | 0.551076 | 3.3:-91680454 | MS.gene014578:CDS |
| TCAATCCACATTGGTCAAGC+CGG | 0.555162 | 3.3:-91681853 | MS.gene014578:CDS |
| ATAAACGGTAAAACCCAACT+TGG | 0.555240 | 3.3:+91681150 | None:intergenic |
| GTTGGTGCTGAGTCTGGTGA+TGG | 0.556011 | 3.3:-91680179 | MS.gene014578:CDS |
| CCACCAGGAACAACAGTTGG+AGG | 0.556528 | 3.3:+91680407 | None:intergenic |
| TGCATCATCTCCTCCTCCAA+CGG | 0.556914 | 3.3:+91681625 | None:intergenic |
| CAGGAACAACAGTTGGAGGC+TGG | 0.557000 | 3.3:+91680411 | None:intergenic |
| CCTGGAGACAAGACCGTTGG+AGG | 0.557403 | 3.3:-91681638 | MS.gene014578:CDS |
| TGTGCATTGGTATGTTGGTG+AGG | 0.557980 | 3.3:-91680270 | MS.gene014578:CDS |
| TCACCACCAGGAACAACAGT+TGG | 0.562091 | 3.3:+91680404 | None:intergenic |
| GGAGACAAGACCGTTGGAGG+AGG | 0.562701 | 3.3:-91681635 | MS.gene014578:CDS |
| CAGCAACATCAGTGTGCTCA+AGG | 0.564079 | 3.3:+91681062 | None:intergenic |
| CAAGGAGGGAATGGGTTGAA+AGG | 0.564699 | 3.3:+91681080 | None:intergenic |
| CACCAAGAAACCTTGCAGAC+CGG | 0.566087 | 3.3:+91681255 | None:intergenic |
| TAACTCTACCAGTGTTGCTG+AGG | 0.566930 | 3.3:-91680345 | MS.gene014578:CDS |
| TTTGTGTCCTTCAGTTGGGA+AGG | 0.568538 | 3.3:-91681329 | MS.gene014578:intron |
| AAAGCATGAAATGGATCCTA+GGG | 0.569228 | 3.3:+91680696 | None:intergenic |
| ACACCAATCAACAAACTGAA+TGG | 0.571183 | 3.3:+91680463 | None:intergenic |
| ATACCGCACTTGAACCCAGT+TGG | 0.571477 | 3.3:+91680440 | None:intergenic |
| GTTGAAAGGACACTGTTGTA+GGG | 0.573119 | 3.3:+91681094 | None:intergenic |
| GGAAAACACCTCAGCAACAC+TGG | 0.575051 | 3.3:+91680337 | None:intergenic |
| AGAGACAAGGCGATTGAGGT+TGG | 0.575918 | 3.3:+91680970 | None:intergenic |
| ACCTGTTATCTCTGCTGAGA+AGG | 0.577342 | 3.3:-91680663 | MS.gene014578:CDS |
| AAACCTCAAAGAGGCAGTGA+GGG | 0.578416 | 3.3:+91680772 | None:intergenic |
| TGAGTTCTCTGAGGCTCGTG+AGG | 0.578430 | 3.3:-91680234 | MS.gene014578:CDS |
| AACCACAGAGGTAGAAACCT+GGG | 0.579213 | 3.3:+91681120 | None:intergenic |
| ATGCCTGGAGACAAGACCGT+TGG | 0.583327 | 3.3:-91681641 | MS.gene014578:CDS |
| ACCACGGGCGAAGTTGTTGG+CGG | 0.584023 | 3.3:+91681451 | None:intergenic |
| GAGAAGGATTATGAGGAGGT+TGG | 0.588091 | 3.3:-91680197 | MS.gene014578:CDS |
| GAACTTTACTGCCTTGAACA+CGG | 0.589043 | 3.3:-91681805 | MS.gene014578:CDS |
| TGATCTTGCCAAGGTCCAAA+GGG | 0.589383 | 3.3:-91680384 | MS.gene014578:CDS |
| AACATCAGTGTGCTCAAGGA+GGG | 0.590528 | 3.3:+91681066 | None:intergenic |
| AGTGTGCTCAAGGAGGGAAT+GGG | 0.591430 | 3.3:+91681072 | None:intergenic |
| TCCCCAGGTTTCTACCTCTG+TGG | 0.593813 | 3.3:-91681122 | MS.gene014578:CDS |
| CGATTGAGGTTGGTGTAAGT+GGG | 0.594949 | 3.3:+91680980 | None:intergenic |
| CCAACTTGGTTCCTTACCCT+AGG | 0.596446 | 3.3:-91680712 | MS.gene014578:CDS |
| GAAGAGTTGACGGTAAGCAC+CGG | 0.597156 | 3.3:+91681508 | None:intergenic |
| CAACCACAGAGGTAGAAACC+TGG | 0.597626 | 3.3:+91681119 | None:intergenic |
| AGATCTACGAAGACGGCGCG+TGG | 0.600243 | 3.3:+91681560 | None:intergenic |
| AAGGCAGTAAAGTTCCCAGC+AGG | 0.601634 | 3.3:+91681813 | None:intergenic |
| TTGTTGATCTATGCCTCGAT+AGG | 0.603776 | 3.3:-91681303 | MS.gene014578:CDS |
| AAGCTAGCAGATAACTGTAC+CGG | 0.604721 | 3.3:-91681274 | MS.gene014578:CDS |
| CCTCCAACTGTTGTTCCTGG+TGG | 0.605513 | 3.3:-91680407 | MS.gene014578:CDS |
| TTGGTGTTCAATGCTGTGGG+TGG | 0.611760 | 3.3:-91681238 | MS.gene014578:CDS |
| GCCGCCAACAACTTCGCCCG+TGG | 0.616675 | 3.3:-91681452 | MS.gene014578:CDS |
| GATAACTGTACCGGTCTGCA+AGG | 0.617527 | 3.3:-91681265 | MS.gene014578:CDS |
| AGATGATGTTGATGGAGATG+AGG | 0.621023 | 3.3:-91680156 | MS.gene014578:CDS |
| GCTAAGTGTGACCCTCGCCA+TGG | 0.621505 | 3.3:-91680575 | MS.gene014578:CDS |
| GGATCTCGCTGCTCTCGAGA+AGG | 0.623492 | 3.3:-91680213 | MS.gene014578:CDS |
| AGAGATAACAGGTGCGTACG+AGG | 0.631288 | 3.3:+91680673 | None:intergenic |
| ACTGCAGCATTCACGTCCTT+AGG | 0.632837 | 3.3:+91680509 | None:intergenic |
| CCTAGGGTAAGGAACCAAGT+TGG | 0.636144 | 3.3:+91680712 | None:intergenic |
| CTAGCTTTCGGATCCTATCG+AGG | 0.641945 | 3.3:+91681290 | None:intergenic |
| TGCTCCATCAAACCTCAAAG+AGG | 0.642331 | 3.3:+91680763 | None:intergenic |
| CGTACTGGTATAATGACCAC+GGG | 0.644337 | 3.3:+91681436 | None:intergenic |
| GGTCAAGCCGGTATCCAGGT+CGG | 0.648566 | 3.3:-91681841 | MS.gene014578:CDS |
| CACCCTGAACAACTCATCAG+CGG | 0.650288 | 3.3:-91681485 | MS.gene014578:CDS |
| TGTCCAACTGGGTTCAAGTG+CGG | 0.653024 | 3.3:-91680443 | MS.gene014578:CDS |
| CAACATCAGTGTGCTCAAGG+AGG | 0.655233 | 3.3:+91681065 | None:intergenic |
| TTGCAACCATCAAGACCAAG+AGG | 0.655579 | 3.3:-91680487 | MS.gene014578:CDS |
| TGGTTCCAGATCTACGAAGA+CGG | 0.658526 | 3.3:+91681553 | None:intergenic |
| CGCTGATGAGTTGTTCAGGG+TGG | 0.660350 | 3.3:+91681486 | None:intergenic |
| CAAACCTCAAAGAGGCAGTG+AGG | 0.663855 | 3.3:+91680771 | None:intergenic |
| ACGTACTGGTATAATGACCA+CGG | 0.670676 | 3.3:+91681435 | None:intergenic |
| ACCTTGGCAAGATCACCACC+AGG | 0.672683 | 3.3:+91680392 | None:intergenic |
| GGATACCGGCTTGACCAATG+TGG | 0.673011 | 3.3:+91681848 | None:intergenic |
| GAGTGCATTTCAATCCACAT+TGG | 0.673256 | 3.3:-91681862 | MS.gene014578:CDS |
| AAGTATATACCTGAGAGACA+AGG | 0.681840 | 3.3:+91680957 | None:intergenic |
| TCTCGAGAAGGATTATGAGG+AGG | 0.693923 | 3.3:-91680201 | MS.gene014578:CDS |
| ACCACAGAGGTAGAAACCTG+GGG | 0.712460 | 3.3:+91681121 | None:intergenic |
| GCTTGTTGTTTGATGTACCG+CGG | 0.713100 | 3.3:-91680542 | MS.gene014578:CDS |
| GGAAGAAGGTGAGTTCTCTG+AGG | 0.713464 | 3.3:-91680243 | MS.gene014578:CDS |
| GTTGTAGGGTTCAACCACAG+AGG | 0.742914 | 3.3:+91681108 | None:intergenic |
| CCTTAGGCACAACATCACCG+CGG | 0.844586 | 3.3:+91680525 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCTAGATCTCAAATTTA+GGG | - | chr3.3:91680276-91680295 | MS.gene014578:CDS | 20.0% |
| !! | TAATTCTAGATCTCAAATTT+AGG | - | chr3.3:91680275-91680294 | MS.gene014578:CDS | 20.0% |
| !!! | AGATCTAGAATTAAAAAAAG+TGG | + | chr3.3:91680268-91680287 | None:intergenic | 20.0% |
| ! | GAATTATGTAGCAAATATTG+AGG | - | chr3.3:91681130-91681149 | MS.gene014578:CDS | 25.0% |
| ! | TAACAACCAAATATAGAGAA+TGG | - | chr3.3:91681081-91681100 | MS.gene014578:CDS | 25.0% |
| ! | TATGGTAAAAAATCCAAGTT+GGG | - | chr3.3:91680853-91680872 | MS.gene014578:intron | 25.0% |
| ! | TTATGGTAAAAAATCCAAGT+TGG | - | chr3.3:91680852-91680871 | MS.gene014578:intron | 25.0% |
| ! | TTTCAATTGATTAATCGATG+CGG | - | chr3.3:91680327-91680346 | MS.gene014578:CDS | 25.0% |
| ATCAAACTTATGATCAATCC+TGG | + | chr3.3:91681703-91681722 | None:intergenic | 30.0% | |
| CAAGATCCATTCTCTATATT+TGG | + | chr3.3:91681090-91681109 | None:intergenic | 30.0% | |
| GGCATTCAGGTAATTAATTA+GGG | - | chr3.3:91680232-91680251 | MS.gene014578:CDS | 30.0% | |
| !!! | TTTGTTTGTTGTGCTTTTAC+AGG | - | chr3.3:91681212-91681231 | MS.gene014578:CDS | 30.0% |
| AAAGCATGAAATGGATCCTA+GGG | + | chr3.3:91681323-91681342 | None:intergenic | 35.0% | |
| AACAGAGTTTCAAACCAACT+TGG | - | chr3.3:91681290-91681309 | MS.gene014578:CDS | 35.0% | |
| AAGCTATCTATGACATATGC+AGG | - | chr3.3:91680992-91681011 | MS.gene014578:CDS | 35.0% | |
| AAGTATATACCTGAGAGACA+AGG | + | chr3.3:91681062-91681081 | None:intergenic | 35.0% | |
| ACACCAATCAACAAACTGAA+TGG | + | chr3.3:91681556-91681575 | None:intergenic | 35.0% | |
| ATAAACGGTAAAACCCAACT+TGG | + | chr3.3:91680869-91680888 | None:intergenic | 35.0% | |
| ATTGAATGACGAAAACGTAC+TGG | + | chr3.3:91680598-91680617 | None:intergenic | 35.0% | |
| CGGCATTCAGGTAATTAATT+AGG | - | chr3.3:91680231-91680250 | MS.gene014578:CDS | 35.0% | |
| GATCTTGAAATGTTTGCGTT+TGG | - | chr3.3:91681103-91681122 | MS.gene014578:CDS | 35.0% | |
| ! | AACAAGCCATGTATTTTCCA+TGG | + | chr3.3:91681461-91681480 | None:intergenic | 35.0% |
| ! | ATGATTTGTGTCCTTCAGTT+GGG | - | chr3.3:91680683-91680702 | MS.gene014578:CDS | 35.0% |
| ! | GAGCGTTTATCTGTTGATTA+TGG | - | chr3.3:91680835-91680854 | MS.gene014578:intron | 35.0% |
| ! | TATGATTTGTGTCCTTCAGT+TGG | - | chr3.3:91680682-91680701 | MS.gene014578:CDS | 35.0% |
| ! | TTTTGAACCTTCTTCCATGA+TGG | - | chr3.3:91681419-91681438 | MS.gene014578:intron | 35.0% |
| !! | TACAGTTATCTGCTAGCTTT+CGG | + | chr3.3:91680741-91680760 | None:intergenic | 35.0% |
| AACAAACTGAATGGTCCTCT+TGG | + | chr3.3:91681547-91681566 | None:intergenic | 40.0% | |
| AAGCTAGCAGATAACTGTAC+CGG | - | chr3.3:91680742-91680761 | MS.gene014578:CDS | 40.0% | |
| ATGAAATGGATCCTAGGGTA+AGG | + | chr3.3:91681318-91681337 | None:intergenic | 40.0% | |
| GAACTTTACTGCCTTGAACA+CGG | - | chr3.3:91680211-91680230 | MS.gene014578:CDS | 40.0% | |
| GAGTGCATTTCAATCCACAT+TGG | - | chr3.3:91680154-91680173 | MS.gene014578:CDS | 40.0% | |
| GTTGAAAGGACACTGTTGTA+GGG | + | chr3.3:91680925-91680944 | None:intergenic | 40.0% | |
| TTGTTGATCTATGCCTCGAT+AGG | - | chr3.3:91680713-91680732 | MS.gene014578:CDS | 40.0% | |
| ! | ACGTACTGGTATAATGACCA+CGG | + | chr3.3:91680584-91680603 | None:intergenic | 40.0% |
| ! | AGATGATGTTGATGGAGATG+AGG | - | chr3.3:91681860-91681879 | MS.gene014578:CDS | 40.0% |
| ! | GAAAGCATGAAATGGATCCT+AGG | + | chr3.3:91681324-91681343 | None:intergenic | 40.0% |
| ! | TTGTTGATTGGTGTCCAACT+GGG | - | chr3.3:91681562-91681581 | MS.gene014578:CDS | 40.0% |
| ! | TTTGTTGATTGGTGTCCAAC+TGG | - | chr3.3:91681561-91681580 | MS.gene014578:CDS | 40.0% |
| !! | AGAAGGTTCAAAAGCACTGT+TGG | + | chr3.3:91681412-91681431 | None:intergenic | 40.0% |
| !! | GCTTTTGTGCATTGGTATGT+TGG | - | chr3.3:91681741-91681760 | MS.gene014578:intron | 40.0% |
| !! | GGACCATTCAGTTTGTTGAT+TGG | - | chr3.3:91681550-91681569 | MS.gene014578:CDS | 40.0% |
| !! | TTCTTGGTGTTCAATGCTGT+GGG | - | chr3.3:91680775-91680794 | MS.gene014578:CDS | 40.0% |
| !! | TTTCTTGGTGTTCAATGCTG+TGG | - | chr3.3:91680774-91680793 | MS.gene014578:CDS | 40.0% |
| AAACCTCAAAGAGGCAGTGA+GGG | + | chr3.3:91681247-91681266 | None:intergenic | 45.0% | |
| AACACGTTCTTCAGCGAAAC+CGG | - | chr3.3:91680417-91680436 | MS.gene014578:CDS | 45.0% | |
| AACATCAGTGTGCTCAAGGA+GGG | + | chr3.3:91680953-91680972 | None:intergenic | 45.0% | |
| AACCACAGAGGTAGAAACCT+GGG | + | chr3.3:91680899-91680918 | None:intergenic | 45.0% | |
| AACCTGGGGAGATGGATAAA+CGG | + | chr3.3:91680884-91680903 | None:intergenic | 45.0% | |
| AAGAGAACCCAAACCAGATC+CGG | + | chr3.3:91680809-91680828 | None:intergenic | 45.0% | |
| ACAATCTCCTTCCCAACTGA+AGG | + | chr3.3:91680697-91680716 | None:intergenic | 45.0% | |
| ACCTGTTATCTCTGCTGAGA+AGG | - | chr3.3:91681353-91681372 | MS.gene014578:intron | 45.0% | |
| CACTTAGCCATCATGGAAGA+AGG | + | chr3.3:91681429-91681448 | None:intergenic | 45.0% | |
| CAGCAACAGAAAGCTGTTCA+TGG | + | chr3.3:91681383-91681402 | None:intergenic | 45.0% | |
| GAGAAGGATTATGAGGAGGT+TGG | - | chr3.3:91681819-91681838 | MS.gene014578:CDS | 45.0% | |
| GGTTGAAAGGACACTGTTGT+AGG | + | chr3.3:91680926-91680945 | None:intergenic | 45.0% | |
| GTCATTGACGAAGTCAGAAC+CGG | - | chr3.3:91680489-91680508 | MS.gene014578:CDS | 45.0% | |
| TCAATCCACATTGGTCAAGC+CGG | - | chr3.3:91680163-91680182 | MS.gene014578:CDS | 45.0% | |
| TCTCGAGAAGGATTATGAGG+AGG | - | chr3.3:91681815-91681834 | MS.gene014578:CDS | 45.0% | |
| TGATCTTGCCAAGGTCCAAA+GGG | - | chr3.3:91681632-91681651 | MS.gene014578:CDS | 45.0% | |
| TGCTCCATCAAACCTCAAAG+AGG | + | chr3.3:91681256-91681275 | None:intergenic | 45.0% | |
| TGCTCTCGAGAAGGATTATG+AGG | - | chr3.3:91681812-91681831 | MS.gene014578:CDS | 45.0% | |
| TGGTTCCAGATCTACGAAGA+CGG | + | chr3.3:91680466-91680485 | None:intergenic | 45.0% | |
| TTACCTGAATGCCGTGTTCA+AGG | + | chr3.3:91680225-91680244 | None:intergenic | 45.0% | |
| TTGCAACCATCAAGACCAAG+AGG | - | chr3.3:91681529-91681548 | MS.gene014578:CDS | 45.0% | |
| TTTGTGTCCTTCAGTTGGGA+AGG | - | chr3.3:91680687-91680706 | MS.gene014578:CDS | 45.0% | |
| ! | CCATGTATTTTCCATGGCGA+GGG | + | chr3.3:91681455-91681474 | None:intergenic | 45.0% |
| ! | CGTACGAGGAAAGCATGAAA+TGG | + | chr3.3:91681332-91681351 | None:intergenic | 45.0% |
| ! | CGTACTGGTATAATGACCAC+GGG | + | chr3.3:91680583-91680602 | None:intergenic | 45.0% |
| ! | GGTTCTGACTTCGTCAATGA+CGG | + | chr3.3:91680490-91680509 | None:intergenic | 45.0% |
| ! | GTGCATTGGTATGTTGGTGA+GGG | - | chr3.3:91681747-91681766 | MS.gene014578:intron | 45.0% |
| ! | TAACTCTACCAGTGTTGCTG+AGG | - | chr3.3:91681671-91681690 | MS.gene014578:intron | 45.0% |
| ! | TGGTTTGGGTTCTCTTCTGT+TGG | - | chr3.3:91680813-91680832 | MS.gene014578:intron | 45.0% |
| ! | TGTGCATTGGTATGTTGGTG+AGG | - | chr3.3:91681746-91681765 | MS.gene014578:intron | 45.0% |
| ! | TTGGTATGTTGGTGAGGGTA+TGG | - | chr3.3:91681752-91681771 | MS.gene014578:intron | 45.0% |
| !! | AATGGTCCTCTTGGTCTTGA+TGG | + | chr3.3:91681538-91681557 | None:intergenic | 45.0% |
| !! | ACTGCCTCTTTGAGGTTTGA+TGG | - | chr3.3:91681249-91681268 | MS.gene014578:CDS | 45.0% |
| !! | CGATTGAGGTTGGTGTAAGT+GGG | + | chr3.3:91681039-91681058 | None:intergenic | 45.0% |
| !! | GCTTGTTGTTTGATGTACCG+CGG | - | chr3.3:91681474-91681493 | MS.gene014578:CDS | 45.0% |
| !! | GGTGATGGAGATGATGTTGA+TGG | - | chr3.3:91681852-91681871 | MS.gene014578:CDS | 45.0% |
| !!! | GGTGTTGTTTTTCAGCCTGA+TGG | - | chr3.3:91680348-91680367 | MS.gene014578:CDS | 45.0% |
| AAGGCAGTAAAGTTCCCAGC+AGG | + | chr3.3:91680206-91680225 | None:intergenic | 50.0% | |
| ACCACAGAGGTAGAAACCTG+GGG | + | chr3.3:91680898-91680917 | None:intergenic | 50.0% | |
| ACTGCAGCATTCACGTCCTT+AGG | + | chr3.3:91681510-91681529 | None:intergenic | 50.0% | |
| AGAGACAAGGCGATTGAGGT+TGG | + | chr3.3:91681049-91681068 | None:intergenic | 50.0% | |
| AGAGATAACAGGTGCGTACG+AGG | + | chr3.3:91681346-91681365 | None:intergenic | 50.0% | |
| AGATCATGCACACAGCCCTT+TGG | + | chr3.3:91681650-91681669 | None:intergenic | 50.0% | |
| AGGGTCACACTTAGCCATCA+TGG | + | chr3.3:91681436-91681455 | None:intergenic | 50.0% | |
| AGTGTGCTCAAGGAGGGAAT+GGG | + | chr3.3:91680947-91680966 | None:intergenic | 50.0% | |
| ATACCGCACTTGAACCCAGT+TGG | + | chr3.3:91681579-91681598 | None:intergenic | 50.0% | |
| CAAACCTCAAAGAGGCAGTG+AGG | + | chr3.3:91681248-91681267 | None:intergenic | 50.0% | |
| CAACATCAGTGTGCTCAAGG+AGG | + | chr3.3:91680954-91680973 | None:intergenic | 50.0% | |
| CAACCACAGAGGTAGAAACC+TGG | + | chr3.3:91680900-91680919 | None:intergenic | 50.0% | |
| CACCAAGAAACCTTGCAGAC+CGG | + | chr3.3:91680764-91680783 | None:intergenic | 50.0% | |
| CACCCTGAACAACTCATCAG+CGG | - | chr3.3:91680531-91680550 | MS.gene014578:CDS | 50.0% | |
| CAGCAACATCAGTGTGCTCA+AGG | + | chr3.3:91680957-91680976 | None:intergenic | 50.0% | |
| CCAACTTGGTTCCTTACCCT+AGG | - | chr3.3:91681304-91681323 | MS.gene014578:CDS | 50.0% | |
| CCCTCGCCATGGAAAATACA+TGG | - | chr3.3:91681452-91681471 | MS.gene014578:CDS | 50.0% | |
| CCTAGGGTAAGGAACCAAGT+TGG | + | chr3.3:91681307-91681326 | None:intergenic | 50.0% | |
| CTGACTTCGTCAATGACGGT+TGG | + | chr3.3:91680486-91680505 | None:intergenic | 50.0% | |
| GAAGAGTTGACGGTAAGCAC+CGG | + | chr3.3:91680511-91680530 | None:intergenic | 50.0% | |
| GCCTTCTCAGCAGAGATAAC+AGG | + | chr3.3:91681357-91681376 | None:intergenic | 50.0% | |
| GGAAAACACCTCAGCAACAC+TGG | + | chr3.3:91681682-91681701 | None:intergenic | 50.0% | |
| GGAAGAAGGTGAGTTCTCTG+AGG | - | chr3.3:91681773-91681792 | MS.gene014578:intron | 50.0% | |
| GTGATCTTGCCAAGGTCCAA+AGG | - | chr3.3:91681631-91681650 | MS.gene014578:CDS | 50.0% | |
| GTTCAGGGTGGAAGAGTTGA+CGG | + | chr3.3:91680521-91680540 | None:intergenic | 50.0% | |
| GTTGTAGGGTTCAACCACAG+AGG | + | chr3.3:91680911-91680930 | None:intergenic | 50.0% | |
| TACCGGTCTGCAAGGTTTCT+TGG | - | chr3.3:91680759-91680778 | MS.gene014578:CDS | 50.0% | |
| TACCGTTTATCCATCTCCCC+AGG | - | chr3.3:91680879-91680898 | MS.gene014578:intron | 50.0% | |
| TCACCACCAGGAACAACAGT+TGG | + | chr3.3:91681615-91681634 | None:intergenic | 50.0% | |
| TGCATCATCTCCTCCTCCAA+CGG | + | chr3.3:91680394-91680413 | None:intergenic | 50.0% | |
| TGCCGCTGATGAGTTGTTCA+GGG | + | chr3.3:91680536-91680555 | None:intergenic | 50.0% | |
| TGTCCAACTGGGTTCAAGTG+CGG | - | chr3.3:91681573-91681592 | MS.gene014578:CDS | 50.0% | |
| TTGCCGCTGATGAGTTGTTC+AGG | + | chr3.3:91680537-91680556 | None:intergenic | 50.0% | |
| ! | CCAAGCGTGCTTTTGTGCAT+TGG | - | chr3.3:91681733-91681752 | MS.gene014578:intron | 50.0% |
| ! | CCAATGCACAAAAGCACGCT+TGG | + | chr3.3:91681736-91681755 | None:intergenic | 50.0% |
| ! | CTAGCTTTCGGATCCTATCG+AGG | + | chr3.3:91680729-91680748 | None:intergenic | 50.0% |
| ! | GATAACTGTACCGGTCTGCA+AGG | - | chr3.3:91680751-91680770 | MS.gene014578:CDS | 50.0% |
| ! | GCCATGTATTTTCCATGGCG+AGG | + | chr3.3:91681456-91681475 | None:intergenic | 50.0% |
| ! | GTTGGTGAGGGTATGGAAGA+AGG | - | chr3.3:91681759-91681778 | MS.gene014578:intron | 50.0% |
| ! | TTGGTGTTCAATGCTGTGGG+TGG | - | chr3.3:91680778-91680797 | MS.gene014578:CDS | 50.0% |
| !! | CAAGGAGGGAATGGGTTGAA+AGG | + | chr3.3:91680939-91680958 | None:intergenic | 50.0% |
| !! | GCGATTGAGGTTGGTGTAAG+TGG | + | chr3.3:91681040-91681059 | None:intergenic | 50.0% |
| !! | GTGTTGCTGAGGTGTTTTCC+AGG | - | chr3.3:91681682-91681701 | MS.gene014578:intron | 50.0% |
| ACCTTGGCAAGATCACCACC+AGG | + | chr3.3:91681627-91681646 | None:intergenic | 55.0% | |
| ATGACCACGGGCGAAGTTGT+TGG | + | chr3.3:91680571-91680590 | None:intergenic | 55.0% | |
| ATGCCTGGAGACAAGACCGT+TGG | - | chr3.3:91680375-91680394 | MS.gene014578:CDS | 55.0% | |
| CAGCCTCCAACTGTTGTTCC+TGG | - | chr3.3:91681606-91681625 | MS.gene014578:CDS | 55.0% | |
| CAGGAACAACAGTTGGAGGC+TGG | + | chr3.3:91681608-91681627 | None:intergenic | 55.0% | |
| CAGTGTGCTCAAGGAGGGAA+TGG | + | chr3.3:91680948-91680967 | None:intergenic | 55.0% | |
| CATCCCTCACTGCCTCTTTG+AGG | - | chr3.3:91681241-91681260 | MS.gene014578:CDS | 55.0% | |
| CATTGGTCAAGCCGGTATCC+AGG | - | chr3.3:91680171-91680190 | MS.gene014578:CDS | 55.0% | |
| CCACCAGGAACAACAGTTGG+AGG | + | chr3.3:91681612-91681631 | None:intergenic | 55.0% | |
| CCTCAATCGCCTTGTCTCTC+AGG | - | chr3.3:91681050-91681069 | MS.gene014578:CDS | 55.0% | |
| CCTCCAACTGTTGTTCCTGG+TGG | - | chr3.3:91681609-91681628 | MS.gene014578:CDS | 55.0% | |
| CCTGAGAGACAAGGCGATTG+AGG | + | chr3.3:91681053-91681072 | None:intergenic | 55.0% | |
| CCTTAGGCACAACATCACCG+CGG | + | chr3.3:91681494-91681513 | None:intergenic | 55.0% | |
| CGCTGATGAGTTGTTCAGGG+TGG | + | chr3.3:91680533-91680552 | None:intergenic | 55.0% | |
| CTGCCTTGAACACGGCATTC+AGG | - | chr3.3:91680219-91680238 | MS.gene014578:CDS | 55.0% | |
| GAGGTAGAAACCTGGGGAGA+TGG | + | chr3.3:91680892-91680911 | None:intergenic | 55.0% | |
| GGCATTTCCGACCTGGATAC+CGG | + | chr3.3:91680185-91680204 | None:intergenic | 55.0% | |
| GTGTTCAATGCTGTGGGTGG+TGG | - | chr3.3:91680781-91680800 | MS.gene014578:CDS | 55.0% | |
| TCCCCAGGTTTCTACCTCTG+TGG | - | chr3.3:91680894-91680913 | MS.gene014578:intron | 55.0% | |
| TGGAACATGCTTTCCGGCAC+CGG | + | chr3.3:91680439-91680458 | None:intergenic | 55.0% | |
| TGGTGGAACCGGATCTGGTT+TGG | - | chr3.3:91680798-91680817 | MS.gene014578:intron | 55.0% | |
| TTCTTCAGCGAAACCGGTGC+CGG | - | chr3.3:91680423-91680442 | MS.gene014578:CDS | 55.0% | |
| ! | GGTGGAACCGGATCTGGTTT+GGG | - | chr3.3:91680799-91680818 | MS.gene014578:intron | 55.0% |
| ! | TCCTGGTGGTGATCTTGCCA+AGG | - | chr3.3:91681623-91681642 | MS.gene014578:CDS | 55.0% |
| !! | AATGCTGTGGGTGGTGGAAC+CGG | - | chr3.3:91680787-91680806 | MS.gene014578:intron | 55.0% |
| !! | GGATACCGGCTTGACCAATG+TGG | + | chr3.3:91680171-91680190 | None:intergenic | 55.0% |
| !! | GTTGGTGCTGAGTCTGGTGA+TGG | - | chr3.3:91681837-91681856 | MS.gene014578:CDS | 55.0% |
| !! | TGAGTTCTCTGAGGCTCGTG+AGG | - | chr3.3:91681782-91681801 | MS.gene014578:intron | 55.0% |
| ACCACGGGCGAAGTTGTTGG+CGG | + | chr3.3:91680568-91680587 | None:intergenic | 60.0% | |
| ACGCGCCGTCTTCGTAGATC+TGG | - | chr3.3:91680458-91680477 | MS.gene014578:CDS | 60.0% | |
| AGATCTACGAAGACGGCGCG+TGG | + | chr3.3:91680459-91680478 | None:intergenic | 60.0% | |
| CCAGGTCGGAAATGCCTGCT+GGG | - | chr3.3:91680189-91680208 | MS.gene014578:CDS | 60.0% | |
| CCGCGGTGATGTTGTGCCTA+AGG | - | chr3.3:91681491-91681510 | MS.gene014578:CDS | 60.0% | |
| CCTGGAGACAAGACCGTTGG+AGG | - | chr3.3:91680378-91680397 | MS.gene014578:CDS | 60.0% | |
| GCACACAGCCCTTTGGACCT+TGG | + | chr3.3:91681643-91681662 | None:intergenic | 60.0% | |
| GCTAAGTGTGACCCTCGCCA+TGG | - | chr3.3:91681441-91681460 | MS.gene014578:CDS | 60.0% | |
| GGAGACAAGACCGTTGGAGG+AGG | - | chr3.3:91680381-91680400 | MS.gene014578:CDS | 60.0% | |
| GGATCTCGCTGCTCTCGAGA+AGG | - | chr3.3:91681803-91681822 | MS.gene014578:CDS | 60.0% | |
| GGCGCGTGGAACATGCTTTC+CGG | + | chr3.3:91680445-91680464 | None:intergenic | 60.0% | |
| GGTCAAGCCGGTATCCAGGT+CGG | - | chr3.3:91680175-91680194 | MS.gene014578:CDS | 60.0% | |
| TCCAGGTCGGAAATGCCTGC+TGG | - | chr3.3:91680188-91680207 | MS.gene014578:CDS | 60.0% | |
| TCTCCAGGCATCTGGCCATC+AGG | + | chr3.3:91680366-91680385 | None:intergenic | 60.0% | |
| ! | CCTCCAACGGTCTTGTCTCC+AGG | + | chr3.3:91680381-91680400 | None:intergenic | 60.0% |
| ! | CGGTCTTGTCTCCAGGCATC+TGG | + | chr3.3:91680374-91680393 | None:intergenic | 60.0% |
| !! | GAGGAGGTTGGTGCTGAGTC+TGG | - | chr3.3:91681831-91681850 | MS.gene014578:CDS | 60.0% |
| CAGCCTGATGGCCAGATGCC+TGG | - | chr3.3:91680360-91680379 | MS.gene014578:CDS | 65.0% | |
| CCCAGCAGGCATTTCCGACC+TGG | + | chr3.3:91680192-91680211 | None:intergenic | 65.0% | |
| !! | GTGGGTGGTGGAACCGGATC+TGG | - | chr3.3:91680793-91680812 | MS.gene014578:intron | 65.0% |
| GCCGCCAACAACTTCGCCCG+TGG | - | chr3.3:91680564-91680583 | MS.gene014578:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 91680148 | 91681890 | 91680148 | ID=MS.gene014578 |
| chr3.3 | mRNA | 91680148 | 91681890 | 91680148 | ID=MS.gene014578.t1;Parent=MS.gene014578 |
| chr3.3 | exon | 91681798 | 91681890 | 91681798 | ID=MS.gene014578.t1.exon1;Parent=MS.gene014578.t1 |
| chr3.3 | CDS | 91681798 | 91681890 | 91681798 | ID=cds.MS.gene014578.t1;Parent=MS.gene014578.t1 |
| chr3.3 | exon | 91681441 | 91681675 | 91681441 | ID=MS.gene014578.t1.exon2;Parent=MS.gene014578.t1 |
| chr3.3 | CDS | 91681441 | 91681675 | 91681441 | ID=cds.MS.gene014578.t1;Parent=MS.gene014578.t1 |
| chr3.3 | exon | 91680967 | 91681337 | 91680967 | ID=MS.gene014578.t1.exon3;Parent=MS.gene014578.t1 |
| chr3.3 | CDS | 91680967 | 91681337 | 91680967 | ID=cds.MS.gene014578.t1;Parent=MS.gene014578.t1 |
| chr3.3 | exon | 91680148 | 91680804 | 91680148 | ID=MS.gene014578.t1.exon4;Parent=MS.gene014578.t1 |
| chr3.3 | CDS | 91680148 | 91680804 | 91680148 | ID=cds.MS.gene014578.t1;Parent=MS.gene014578.t1 |
| Gene Sequence |
| Protein sequence |
