Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69089.t1 | XP_003603670.1 | 100 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 3.10E-263 | 917.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69089.t1 | P46259 | 98.9 | 452 | 4 | 1 | 1 | 451 | 1 | 452 | 6.5e-262 | 904.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69089.t1 | G7J421 | 100.0 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 2.2e-263 | 917.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052774 | MS.gene69089 | 0.830943 | 2.21E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69089.t1 | MTR_3g110720 | 100.000 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 0.0 | 939 |
| MS.gene69089.t1 | MTR_4g097830 | 97.118 | 451 | 13 | 0 | 1 | 451 | 1 | 451 | 0.0 | 914 |
| MS.gene69089.t1 | MTR_1g106005 | 97.550 | 449 | 11 | 0 | 1 | 449 | 1 | 449 | 0.0 | 914 |
| MS.gene69089.t1 | MTR_8g085980 | 92.874 | 435 | 31 | 0 | 1 | 435 | 1 | 435 | 0.0 | 834 |
| MS.gene69089.t1 | MTR_7g085800 | 91.403 | 442 | 38 | 0 | 1 | 442 | 1 | 442 | 0.0 | 829 |
| MS.gene69089.t1 | MTR_6g029190 | 83.628 | 452 | 69 | 3 | 1 | 451 | 1 | 448 | 0.0 | 774 |
| MS.gene69089.t1 | MTR_2g041670 | 73.942 | 449 | 112 | 2 | 1 | 449 | 1 | 444 | 0.0 | 662 |
| MS.gene69089.t1 | MTR_2g041400 | 75.291 | 429 | 101 | 2 | 1 | 429 | 1 | 424 | 0.0 | 646 |
| MS.gene69089.t1 | MTR_4g094535 | 42.166 | 434 | 241 | 2 | 1 | 434 | 1 | 424 | 1.08e-125 | 372 |
| MS.gene69089.t1 | MTR_8g107250 | 41.372 | 452 | 254 | 3 | 1 | 450 | 1 | 443 | 1.12e-125 | 372 |
| MS.gene69089.t1 | MTR_4g017630 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 4.11e-125 | 371 |
| MS.gene69089.t1 | MTR_4g019110 | 42.396 | 434 | 240 | 2 | 1 | 434 | 1 | 424 | 1.78e-124 | 369 |
| MS.gene69089.t1 | MTR_4g019090 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 2.46e-124 | 369 |
| MS.gene69089.t1 | MTR_1g101130 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 6.06e-124 | 368 |
| MS.gene69089.t1 | MTR_2g031310 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 6.55e-124 | 367 |
| MS.gene69089.t1 | MTR_7g089120 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 1.43e-123 | 367 |
| MS.gene69089.t1 | MTR_3g113970 | 40.503 | 437 | 246 | 3 | 1 | 434 | 1 | 426 | 5.85e-123 | 365 |
| MS.gene69089.t1 | MTR_8g098360 | 39.545 | 440 | 256 | 2 | 1 | 440 | 1 | 430 | 4.22e-122 | 363 |
| MS.gene69089.t1 | MTR_3g063410 | 97.403 | 154 | 4 | 0 | 252 | 405 | 24 | 177 | 5.14e-110 | 323 |
| MS.gene69089.t1 | MTR_3g063410 | 97.101 | 138 | 4 | 0 | 268 | 405 | 1 | 138 | 3.76e-96 | 286 |
| MS.gene69089.t1 | MTR_7g117050 | 31.614 | 446 | 282 | 9 | 2 | 433 | 3 | 439 | 1.29e-76 | 247 |
| MS.gene69089.t1 | MTR_6g075280 | 42.553 | 94 | 35 | 1 | 355 | 448 | 608 | 682 | 1.30e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69089.t1 | AT4G14960 | 97.105 | 449 | 13 | 0 | 1 | 449 | 1 | 449 | 0.0 | 913 |
| MS.gene69089.t1 | AT1G04820 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
| MS.gene69089.t1 | AT1G50010 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
| MS.gene69089.t1 | AT5G19780 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
| MS.gene69089.t1 | AT5G19770 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
| MS.gene69089.t1 | AT1G64740 | 90.345 | 435 | 42 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| MS.gene69089.t1 | AT4G14960 | 94.103 | 407 | 17 | 1 | 1 | 407 | 1 | 400 | 0.0 | 800 |
| MS.gene69089.t1 | AT1G75780 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.56e-126 | 374 |
| MS.gene69089.t1 | AT5G62700 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.78e-125 | 371 |
| MS.gene69089.t1 | AT5G62690 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.78e-125 | 371 |
| MS.gene69089.t1 | AT1G20010 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.13e-124 | 370 |
| MS.gene69089.t1 | AT2G29550 | 41.270 | 441 | 249 | 2 | 1 | 441 | 1 | 431 | 1.82e-124 | 369 |
| MS.gene69089.t1 | AT5G12250 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 2.34e-124 | 369 |
| MS.gene69089.t1 | AT4G20890 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 5.35e-124 | 368 |
| MS.gene69089.t1 | AT5G23860 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.55e-124 | 368 |
| MS.gene69089.t1 | AT5G23860 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.55e-124 | 368 |
| MS.gene69089.t1 | AT5G44340 | 41.705 | 434 | 243 | 3 | 1 | 434 | 1 | 424 | 4.99e-122 | 363 |
| MS.gene69089.t1 | AT5G05620 | 32.287 | 446 | 279 | 9 | 2 | 433 | 3 | 439 | 5.54e-78 | 250 |
| MS.gene69089.t1 | AT3G61650 | 31.839 | 446 | 281 | 9 | 2 | 433 | 3 | 439 | 1.12e-76 | 247 |
Find 150 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCGTTTATCTGTTGATTA+TGG | 0.257743 | 3.4:-95910711 | MS.gene69089:CDS |
| TACCGGTCTGCAAGGTTTCT+TGG | 0.265637 | 3.4:-95910787 | MS.gene69089:CDS |
| ACTGCCTCTTTGAGGTTTGA+TGG | 0.279194 | 3.4:-95910294 | MS.gene69089:CDS |
| AATGGTCCTCTTGGTCTTGA+TGG | 0.297222 | 3.4:+95910008 | None:intergenic |
| GGCGCGTGGAACATGCTTTC+CGG | 0.314398 | 3.4:+95911104 | None:intergenic |
| CATCCCTCACTGCCTCTTTG+AGG | 0.314555 | 3.4:-95910302 | MS.gene69089:CDS |
| CAGCCTCCAACTGTTGTTCC+TGG | 0.314809 | 3.4:-95909937 | MS.gene69089:CDS |
| TGGTGGAACCGGATCTGGTT+TGG | 0.315781 | 3.4:-95910748 | MS.gene69089:CDS |
| GGTGGAACCGGATCTGGTTT+GGG | 0.317975 | 3.4:-95910747 | MS.gene69089:CDS |
| TTTGTTGATTGGTGTCCAAC+TGG | 0.322748 | 3.4:-95909982 | MS.gene69089:CDS |
| TTGCCGCTGATGAGTTGTTC+AGG | 0.339225 | 3.4:+95911012 | None:intergenic |
| TACAGTTATCTGCTAGCTTT+CGG | 0.351362 | 3.4:+95910808 | None:intergenic |
| AACACGTTCTTCAGCGAAAC+CGG | 0.356725 | 3.4:-95911129 | MS.gene69089:CDS |
| CCTCAATCGCCTTGTCTCTC+AGG | 0.383066 | 3.4:-95910496 | MS.gene69089:intron |
| CTGCCTTGAACACGGCATTC+AGG | 0.391474 | 3.4:-95911325 | MS.gene69089:intron |
| CGGTCTTGTCTCCAGGCATC+TGG | 0.396008 | 3.4:+95911175 | None:intergenic |
| TCTCCAGGCATCTGGCCATC+AGG | 0.405017 | 3.4:+95911183 | None:intergenic |
| TGGTTTGGGTTCTCTTCTGT+TGG | 0.405165 | 3.4:-95910733 | MS.gene69089:CDS |
| GCCTTCTCAGCAGAGATAAC+AGG | 0.413340 | 3.4:+95910189 | None:intergenic |
| CAGCCTGATGGCCAGATGCC+TGG | 0.419485 | 3.4:-95911186 | MS.gene69089:CDS |
| CCTCCAACGGTCTTGTCTCC+AGG | 0.420149 | 3.4:+95911168 | None:intergenic |
| GTGGGTGGTGGAACCGGATC+TGG | 0.423776 | 3.4:-95910753 | MS.gene69089:CDS |
| TTACCTGAATGCCGTGTTCA+AGG | 0.426104 | 3.4:+95911322 | None:intergenic |
| GAGGAGGTTGGTGCTGAGTC+TGG | 0.430544 | 3.4:-95909712 | MS.gene69089:CDS |
| GGACCATTCAGTTTGTTGAT+TGG | 0.433267 | 3.4:-95909993 | MS.gene69089:CDS |
| TTCTTGGTGTTCAATGCTGT+GGG | 0.434584 | 3.4:-95910771 | MS.gene69089:CDS |
| CGGCAACAGAAAGCTGTTCA+TGG | 0.435869 | 3.4:+95910163 | None:intergenic |
| TGGAACATGCTTTCCGGCAC+CGG | 0.438085 | 3.4:+95911110 | None:intergenic |
| AGATCATGCACACAGCCCTT+TGG | 0.440237 | 3.4:+95909896 | None:intergenic |
| GTGTTCAATGCTGTGGGTGG+TGG | 0.440766 | 3.4:-95910765 | MS.gene69089:CDS |
| CAGTGTGCTCAAGGAGGGAA+TGG | 0.443924 | 3.4:+95910601 | None:intergenic |
| TTGGTATGTTGGTGAGGGTA+TGG | 0.447387 | 3.4:-95909791 | MS.gene69089:CDS |
| GCGATTGAGGTTGGTGTAAG+TGG | 0.449517 | 3.4:+95910509 | None:intergenic |
| AATGCTGTGGGTGGTGGAAC+CGG | 0.451993 | 3.4:-95910759 | MS.gene69089:CDS |
| ATCAAACTTATGATCAATCC+TGG | 0.453188 | 3.4:+95909843 | None:intergenic |
| GGTTGAAAGGACACTGTTGT+AGG | 0.458409 | 3.4:+95910623 | None:intergenic |
| ACGCGCCGTCTTCGTAGATC+TGG | 0.458537 | 3.4:-95911088 | MS.gene69089:CDS |
| AACAAACTGAATGGTCCTCT+TGG | 0.460464 | 3.4:+95909999 | None:intergenic |
| TCCAGGTCGGAAATGCCTGC+TGG | 0.462149 | 3.4:-95911356 | MS.gene69089:CDS |
| TTCGCTGAAGAACGTGTTGA+AGG | 0.462873 | 3.4:+95911134 | None:intergenic |
| TGCCGCTGATGAGTTGTTCA+GGG | 0.465671 | 3.4:+95911013 | None:intergenic |
| GGCATTTCCGACCTGGATAC+CGG | 0.466918 | 3.4:+95911362 | None:intergenic |
| AAAAGCACTGTTGGTGATCT+CGG | 0.470781 | 3.4:+95910143 | None:intergenic |
| CCCAGCAGGCATTTCCGACC+TGG | 0.472516 | 3.4:+95911355 | None:intergenic |
| GAAAGCATGAAATGGATCCT+AGG | 0.475578 | 3.4:+95910222 | None:intergenic |
| CCTGAGAGACAAGGCGATTG+AGG | 0.482372 | 3.4:+95910496 | None:intergenic |
| ATGACCACGGGCGAAGTTGT+TGG | 0.484462 | 3.4:+95910978 | None:intergenic |
| GCACACAGCCCTTTGGACCT+TGG | 0.485066 | 3.4:+95909903 | None:intergenic |
| CATTGGTCAAGCCGGTATCC+AGG | 0.488348 | 3.4:-95911373 | MS.gene69089:CDS |
| GGTGATGGAGATGATGTTGA+TGG | 0.495196 | 3.4:-95909691 | MS.gene69089:CDS |
| GTCATTGACGAAGTCAGAAC+CGG | 0.497007 | 3.4:-95911057 | MS.gene69089:CDS |
| GAGGTAGAAACCTGGGGAGA+TGG | 0.498412 | 3.4:+95910657 | None:intergenic |
| AGAGATAACAGGTGCGTATG+AGG | 0.499773 | 3.4:+95910200 | None:intergenic |
| GTGCATTGGTATGTTGGTGA+GGG | 0.501347 | 3.4:-95909796 | MS.gene69089:CDS |
| TTTCTTGGTGTTCAATGCTG+TGG | 0.502010 | 3.4:-95910772 | MS.gene69089:CDS |
| CGTATGAGGAAAGCATGAAA+TGG | 0.503143 | 3.4:+95910214 | None:intergenic |
| CTGACTTCGTCAATGACGGT+TGG | 0.504857 | 3.4:+95911063 | None:intergenic |
| TACCGTTTATCCATCTCCCC+AGG | 0.505210 | 3.4:-95910667 | MS.gene69089:CDS |
| AAGAGAACCCAAACCAGATC+CGG | 0.505914 | 3.4:+95910740 | None:intergenic |
| TGCTCTCGAGAAGGATTATG+AGG | 0.507547 | 3.4:-95909731 | MS.gene69089:CDS |
| TTCTTCAGCGAAACCGGTGC+CGG | 0.513072 | 3.4:-95911123 | MS.gene69089:CDS |
| CCCTCGCCATGGAAAATACA+TGG | 0.514501 | 3.4:-95910091 | MS.gene69089:CDS |
| CCAATGCACAAAAGCACGCT+TGG | 0.520245 | 3.4:+95909810 | None:intergenic |
| AAGCTATCTATGACATATGC+AGG | 0.524385 | 3.4:-95910554 | MS.gene69089:CDS |
| GGTTCTGACTTCGTCAATGA+CGG | 0.528328 | 3.4:+95911059 | None:intergenic |
| AACCTGGGGAGATGGATAAA+CGG | 0.532949 | 3.4:+95910665 | None:intergenic |
| AGGGTCACACTTAGCCATCA+TGG | 0.532951 | 3.4:+95910110 | None:intergenic |
| AACAGAGTTTCAAACCAACT+TGG | 0.533094 | 3.4:-95910253 | MS.gene69089:CDS |
| CACTTAGCCATCATGGAAGA+AGG | 0.536043 | 3.4:+95910117 | None:intergenic |
| AGAAGGTTCAAAAGCACTGT+TGG | 0.538677 | 3.4:+95910134 | None:intergenic |
| CCGCGGTGATGTTGTGCCTA+AGG | 0.540342 | 3.4:-95910052 | MS.gene69089:CDS |
| GTGATCTTGCCAAGGTCCAA+AGG | 0.540632 | 3.4:-95909912 | MS.gene69089:CDS |
| ATGAAATGGATCCTAGGGTA+AGG | 0.544980 | 3.4:+95910228 | None:intergenic |
| CCAGGTCGGAAATGCCTGCT+GGG | 0.545543 | 3.4:-95911355 | MS.gene69089:CDS |
| GTTCAGGGTGGAAGAGTTGA+CGG | 0.545624 | 3.4:+95911028 | None:intergenic |
| GTTGGTGAGGGTATGGAAGA+AGG | 0.547203 | 3.4:-95909784 | MS.gene69089:CDS |
| TCCTGGTGGTGATCTTGCCA+AGG | 0.548720 | 3.4:-95909920 | MS.gene69089:CDS |
| TTGTTGATTGGTGTCCAACT+GGG | 0.551076 | 3.4:-95909981 | MS.gene69089:CDS |
| TCAATCCACATTGGTCAAGC+CGG | 0.555162 | 3.4:-95911381 | MS.gene69089:CDS |
| ATAAACGGTAAAACCCAACT+TGG | 0.555240 | 3.4:+95910680 | None:intergenic |
| GTTGGTGCTGAGTCTGGTGA+TGG | 0.556011 | 3.4:-95909706 | MS.gene69089:CDS |
| CCACCAGGAACAACAGTTGG+AGG | 0.556528 | 3.4:+95909934 | None:intergenic |
| CAGGAACAACAGTTGGAGGC+TGG | 0.557000 | 3.4:+95909938 | None:intergenic |
| CCTGGAGACAAGACCGTTGG+AGG | 0.557403 | 3.4:-95911168 | MS.gene69089:CDS |
| TGTGCATTGGTATGTTGGTG+AGG | 0.557980 | 3.4:-95909797 | MS.gene69089:CDS |
| TCACCACCAGGAACAACAGT+TGG | 0.562091 | 3.4:+95909931 | None:intergenic |
| GGAGACAAGACCGTTGGAGG+AGG | 0.562701 | 3.4:-95911165 | MS.gene69089:CDS |
| CAGCAACATCAGTGTGCTCA+AGG | 0.564079 | 3.4:+95910592 | None:intergenic |
| CAAGGAGGGAATGGGTTGAA+AGG | 0.564699 | 3.4:+95910610 | None:intergenic |
| CACCAAGAAACCTTGCAGAC+CGG | 0.566087 | 3.4:+95910785 | None:intergenic |
| TAACTCTACCAGTGTTGCTG+AGG | 0.566930 | 3.4:-95909872 | MS.gene69089:CDS |
| GGCATCATCTCCTCCTCCAA+CGG | 0.567140 | 3.4:+95911155 | None:intergenic |
| TTTGTGTCCTTCAGTTGGGA+AGG | 0.568538 | 3.4:-95910859 | MS.gene69089:intron |
| AAAGCATGAAATGGATCCTA+GGG | 0.569228 | 3.4:+95910223 | None:intergenic |
| ACACCAATCAACAAACTGAA+TGG | 0.571183 | 3.4:+95909990 | None:intergenic |
| ATACCGCACTTGAACCCAGT+TGG | 0.571477 | 3.4:+95909967 | None:intergenic |
| GTTGAAAGGACACTGTTGTA+GGG | 0.573119 | 3.4:+95910624 | None:intergenic |
| GGAAAACACCTCAGCAACAC+TGG | 0.575051 | 3.4:+95909864 | None:intergenic |
| AGAGACAAGGCGATTGAGGT+TGG | 0.575918 | 3.4:+95910500 | None:intergenic |
| ACCTGTTATCTCTGCTGAGA+AGG | 0.577342 | 3.4:-95910190 | MS.gene69089:CDS |
| AAACCTCAAAGAGGCAGTGA+GGG | 0.578416 | 3.4:+95910299 | None:intergenic |
| TGAGTTCTCTGAGGCTCGTG+AGG | 0.578430 | 3.4:-95909761 | MS.gene69089:CDS |
| AACCACAGAGGTAGAAACCT+GGG | 0.579213 | 3.4:+95910650 | None:intergenic |
| ATGCCTGGAGACAAGACCGT+TGG | 0.583327 | 3.4:-95911171 | MS.gene69089:CDS |
| ACCACGGGCGAAGTTGTTGG+CGG | 0.584023 | 3.4:+95910981 | None:intergenic |
| GAGAAGGATTATGAGGAGGT+TGG | 0.588091 | 3.4:-95909724 | MS.gene69089:CDS |
| GAACTTTACTGCCTTGAACA+CGG | 0.589043 | 3.4:-95911333 | MS.gene69089:CDS |
| TGATCTTGCCAAGGTCCAAA+GGG | 0.589383 | 3.4:-95909911 | MS.gene69089:CDS |
| AACATCAGTGTGCTCAAGGA+GGG | 0.590528 | 3.4:+95910596 | None:intergenic |
| AGTGTGCTCAAGGAGGGAAT+GGG | 0.591430 | 3.4:+95910602 | None:intergenic |
| TCCCCAGGTTTCTACCTCTG+TGG | 0.593813 | 3.4:-95910652 | MS.gene69089:CDS |
| CGATTGAGGTTGGTGTAAGT+GGG | 0.594949 | 3.4:+95910510 | None:intergenic |
| CCAACTTGGTTCCTTACCCT+AGG | 0.596446 | 3.4:-95910239 | MS.gene69089:CDS |
| GAAGAGTTGACGGTAAGCAC+CGG | 0.597156 | 3.4:+95911038 | None:intergenic |
| CAACCACAGAGGTAGAAACC+TGG | 0.597626 | 3.4:+95910649 | None:intergenic |
| AGATCTACGAAGACGGCGCG+TGG | 0.600243 | 3.4:+95911090 | None:intergenic |
| AAGGCAGTAAAGTTCCCAGC+AGG | 0.601634 | 3.4:+95911341 | None:intergenic |
| TTGTTGATCTATGCCTCGAT+AGG | 0.603776 | 3.4:-95910833 | MS.gene69089:CDS |
| AAGCTAGCAGATAACTGTAC+CGG | 0.604721 | 3.4:-95910804 | MS.gene69089:CDS |
| CCTCCAACTGTTGTTCCTGG+TGG | 0.605513 | 3.4:-95909934 | MS.gene69089:CDS |
| TTGGTGTTCAATGCTGTGGG+TGG | 0.611760 | 3.4:-95910768 | MS.gene69089:CDS |
| GCCGCCAACAACTTCGCCCG+TGG | 0.616675 | 3.4:-95910982 | MS.gene69089:CDS |
| GATAACTGTACCGGTCTGCA+AGG | 0.617527 | 3.4:-95910795 | MS.gene69089:CDS |
| AGATGATGTTGATGGAGATG+AGG | 0.621023 | 3.4:-95909683 | MS.gene69089:CDS |
| GGATCTTGCTGCTCTCGAGA+AGG | 0.621052 | 3.4:-95909740 | MS.gene69089:CDS |
| GCTAAGTGTGACCCTCGCCA+TGG | 0.621505 | 3.4:-95910102 | MS.gene69089:CDS |
| ACTGCAGCATTCACGTCCTT+AGG | 0.632837 | 3.4:+95910036 | None:intergenic |
| CCTAGGGTAAGGAACCAAGT+TGG | 0.636144 | 3.4:+95910239 | None:intergenic |
| CTAGCTTTCGGATCCTATCG+AGG | 0.641945 | 3.4:+95910820 | None:intergenic |
| TGCTCCATCAAACCTCAAAG+AGG | 0.642331 | 3.4:+95910290 | None:intergenic |
| CGTACTGGTATAATGACCAC+GGG | 0.644337 | 3.4:+95910966 | None:intergenic |
| GGTCAAGCCGGTATCCAGGT+CGG | 0.648566 | 3.4:-95911369 | MS.gene69089:CDS |
| CACCCTGAACAACTCATCAG+CGG | 0.650288 | 3.4:-95911015 | MS.gene69089:CDS |
| TGTCCAACTGGGTTCAAGTG+CGG | 0.653024 | 3.4:-95909970 | MS.gene69089:CDS |
| CAACATCAGTGTGCTCAAGG+AGG | 0.655233 | 3.4:+95910595 | None:intergenic |
| TTGCAACCATCAAGACCAAG+AGG | 0.655579 | 3.4:-95910014 | MS.gene69089:CDS |
| TGGTTCCAGATCTACGAAGA+CGG | 0.658526 | 3.4:+95911083 | None:intergenic |
| CGCTGATGAGTTGTTCAGGG+TGG | 0.660350 | 3.4:+95911016 | None:intergenic |
| CAAACCTCAAAGAGGCAGTG+AGG | 0.663855 | 3.4:+95910298 | None:intergenic |
| ACGTACTGGTATAATGACCA+CGG | 0.670676 | 3.4:+95910965 | None:intergenic |
| ACCTTGGCAAGATCACCACC+AGG | 0.672683 | 3.4:+95909919 | None:intergenic |
| GGATACCGGCTTGACCAATG+TGG | 0.673011 | 3.4:+95911376 | None:intergenic |
| GAGTGCATTTCAATCCACAT+TGG | 0.673256 | 3.4:-95911390 | MS.gene69089:CDS |
| AAGTATATACCTGAGAGACA+AGG | 0.681840 | 3.4:+95910487 | None:intergenic |
| TCTCGAGAAGGATTATGAGG+AGG | 0.693923 | 3.4:-95909728 | MS.gene69089:CDS |
| ACCACAGAGGTAGAAACCTG+GGG | 0.712460 | 3.4:+95910651 | None:intergenic |
| GCTTGTTGTTTGATGTACCG+CGG | 0.713100 | 3.4:-95910069 | MS.gene69089:CDS |
| GGAAGAAGGTGAGTTCTCTG+AGG | 0.713464 | 3.4:-95909770 | MS.gene69089:CDS |
| GTTGTAGGGTTCAACCACAG+AGG | 0.742914 | 3.4:+95910638 | None:intergenic |
| CCTTAGGCACAACATCACCG+CGG | 0.844586 | 3.4:+95910052 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATGTAGCAAATATTTG+AGG | - | chr3.4:95910656-95910675 | MS.gene69089:CDS | 20.0% |
| !! | AATTCTAGATCTCAAATTTA+GGG | - | chr3.4:95909802-95909821 | MS.gene69089:CDS | 20.0% |
| !! | TAATTCTAGATCTCAAATTT+AGG | - | chr3.4:95909801-95909820 | MS.gene69089:CDS | 20.0% |
| !!! | GAGATCTAGAATTAAAAAAA+TGG | + | chr3.4:95909795-95909814 | None:intergenic | 20.0% |
| ! | TAACAACCAAATATAGAGAA+TGG | - | chr3.4:95910606-95910625 | MS.gene69089:CDS | 25.0% |
| ! | TATGGTAAAAAATCCAAGTT+GGG | - | chr3.4:95910378-95910397 | MS.gene69089:intron | 25.0% |
| ! | TTATGGTAAAAAATCCAAGT+TGG | - | chr3.4:95910377-95910396 | MS.gene69089:intron | 25.0% |
| ! | TTTCAATTGATTAATCGATG+CGG | - | chr3.4:95909852-95909871 | MS.gene69089:CDS | 25.0% |
| ATCAAACTTATGATCAATCC+TGG | + | chr3.4:95911231-95911250 | None:intergenic | 30.0% | |
| CAAGATCCATTCTCTATATT+TGG | + | chr3.4:95910615-95910634 | None:intergenic | 30.0% | |
| AAAGCATGAAATGGATCCTA+GGG | + | chr3.4:95910851-95910870 | None:intergenic | 35.0% | |
| AACAGAGTTTCAAACCAACT+TGG | - | chr3.4:95910818-95910837 | MS.gene69089:CDS | 35.0% | |
| AAGCTATCTATGACATATGC+AGG | - | chr3.4:95910517-95910536 | MS.gene69089:CDS | 35.0% | |
| AAGTATATACCTGAGAGACA+AGG | + | chr3.4:95910587-95910606 | None:intergenic | 35.0% | |
| ACACCAATCAACAAACTGAA+TGG | + | chr3.4:95911084-95911103 | None:intergenic | 35.0% | |
| ATAAACGGTAAAACCCAACT+TGG | + | chr3.4:95910394-95910413 | None:intergenic | 35.0% | |
| ATTGAATGACGAAAACGTAC+TGG | + | chr3.4:95910123-95910142 | None:intergenic | 35.0% | |
| GATCTTGAAATGTTTGCGTT+TGG | - | chr3.4:95910628-95910647 | MS.gene69089:CDS | 35.0% | |
| GGCATTCAGGTAACTAATTA+GGG | - | chr3.4:95909759-95909778 | MS.gene69089:CDS | 35.0% | |
| ! | AACAAGCCATGTATTTTCCA+TGG | + | chr3.4:95910989-95911008 | None:intergenic | 35.0% |
| ! | ATGATTTGTGTCCTTCAGTT+GGG | - | chr3.4:95910208-95910227 | MS.gene69089:CDS | 35.0% |
| ! | GAGCGTTTATCTGTTGATTA+TGG | - | chr3.4:95910360-95910379 | MS.gene69089:intron | 35.0% |
| ! | TATGATTTGTGTCCTTCAGT+TGG | - | chr3.4:95910207-95910226 | MS.gene69089:CDS | 35.0% |
| ! | TTTTGAACCTTCTTCCATGA+TGG | - | chr3.4:95910947-95910966 | MS.gene69089:intron | 35.0% |
| !! | TACAGTTATCTGCTAGCTTT+CGG | + | chr3.4:95910266-95910285 | None:intergenic | 35.0% |
| !! | TTTGATGTGCTTGCTTTTAC+AGG | - | chr3.4:95910740-95910759 | MS.gene69089:CDS | 35.0% |
| AACAAACTGAATGGTCCTCT+TGG | + | chr3.4:95911075-95911094 | None:intergenic | 40.0% | |
| AAGCTAGCAGATAACTGTAC+CGG | - | chr3.4:95910267-95910286 | MS.gene69089:CDS | 40.0% | |
| ATGAAATGGATCCTAGGGTA+AGG | + | chr3.4:95910846-95910865 | None:intergenic | 40.0% | |
| CGGCATTCAGGTAACTAATT+AGG | - | chr3.4:95909758-95909777 | MS.gene69089:CDS | 40.0% | |
| GAACTTTACTGCCTTGAACA+CGG | - | chr3.4:95909738-95909757 | MS.gene69089:CDS | 40.0% | |
| GAGTGCATTTCAATCCACAT+TGG | - | chr3.4:95909681-95909700 | MS.gene69089:CDS | 40.0% | |
| GTTGAAAGGACACTGTTGTA+GGG | + | chr3.4:95910450-95910469 | None:intergenic | 40.0% | |
| TTGTTGATCTATGCCTCGAT+AGG | - | chr3.4:95910238-95910257 | MS.gene69089:CDS | 40.0% | |
| ! | ACGTACTGGTATAATGACCA+CGG | + | chr3.4:95910109-95910128 | None:intergenic | 40.0% |
| ! | AGATGATGTTGATGGAGATG+AGG | - | chr3.4:95911388-95911407 | MS.gene69089:CDS | 40.0% |
| ! | CGTATGAGGAAAGCATGAAA+TGG | + | chr3.4:95910860-95910879 | None:intergenic | 40.0% |
| ! | GAAAGCATGAAATGGATCCT+AGG | + | chr3.4:95910852-95910871 | None:intergenic | 40.0% |
| ! | TTGTTGATTGGTGTCCAACT+GGG | - | chr3.4:95911090-95911109 | MS.gene69089:CDS | 40.0% |
| ! | TTTGTTGATTGGTGTCCAAC+TGG | - | chr3.4:95911089-95911108 | MS.gene69089:CDS | 40.0% |
| !! | AAAAGCACTGTTGGTGATCT+CGG | + | chr3.4:95910931-95910950 | None:intergenic | 40.0% |
| !! | AGAAGGTTCAAAAGCACTGT+TGG | + | chr3.4:95910940-95910959 | None:intergenic | 40.0% |
| !! | GCTTTTGTGCATTGGTATGT+TGG | - | chr3.4:95911269-95911288 | MS.gene69089:intron | 40.0% |
| !! | GGACCATTCAGTTTGTTGAT+TGG | - | chr3.4:95911078-95911097 | MS.gene69089:CDS | 40.0% |
| !! | TTCTTGGTGTTCAATGCTGT+GGG | - | chr3.4:95910300-95910319 | MS.gene69089:CDS | 40.0% |
| !! | TTTCTTGGTGTTCAATGCTG+TGG | - | chr3.4:95910299-95910318 | MS.gene69089:CDS | 40.0% |
| AAACCTCAAAGAGGCAGTGA+GGG | + | chr3.4:95910775-95910794 | None:intergenic | 45.0% | |
| AACACGTTCTTCAGCGAAAC+CGG | - | chr3.4:95909942-95909961 | MS.gene69089:CDS | 45.0% | |
| AACATCAGTGTGCTCAAGGA+GGG | + | chr3.4:95910478-95910497 | None:intergenic | 45.0% | |
| AACCACAGAGGTAGAAACCT+GGG | + | chr3.4:95910424-95910443 | None:intergenic | 45.0% | |
| AACCTGGGGAGATGGATAAA+CGG | + | chr3.4:95910409-95910428 | None:intergenic | 45.0% | |
| AAGAGAACCCAAACCAGATC+CGG | + | chr3.4:95910334-95910353 | None:intergenic | 45.0% | |
| ACAATCTCCTTCCCAACTGA+AGG | + | chr3.4:95910222-95910241 | None:intergenic | 45.0% | |
| ACCTGTTATCTCTGCTGAGA+AGG | - | chr3.4:95910881-95910900 | MS.gene69089:intron | 45.0% | |
| AGAGATAACAGGTGCGTATG+AGG | + | chr3.4:95910874-95910893 | None:intergenic | 45.0% | |
| CACTTAGCCATCATGGAAGA+AGG | + | chr3.4:95910957-95910976 | None:intergenic | 45.0% | |
| GAGAAGGATTATGAGGAGGT+TGG | - | chr3.4:95911347-95911366 | MS.gene69089:CDS | 45.0% | |
| GGTTGAAAGGACACTGTTGT+AGG | + | chr3.4:95910451-95910470 | None:intergenic | 45.0% | |
| GTCATTGACGAAGTCAGAAC+CGG | - | chr3.4:95910014-95910033 | MS.gene69089:CDS | 45.0% | |
| TCAATCCACATTGGTCAAGC+CGG | - | chr3.4:95909690-95909709 | MS.gene69089:CDS | 45.0% | |
| TCTCGAGAAGGATTATGAGG+AGG | - | chr3.4:95911343-95911362 | MS.gene69089:CDS | 45.0% | |
| TGATCTTGCCAAGGTCCAAA+GGG | - | chr3.4:95911160-95911179 | MS.gene69089:CDS | 45.0% | |
| TGCTCCATCAAACCTCAAAG+AGG | + | chr3.4:95910784-95910803 | None:intergenic | 45.0% | |
| TGCTCTCGAGAAGGATTATG+AGG | - | chr3.4:95911340-95911359 | MS.gene69089:CDS | 45.0% | |
| TGGTTCCAGATCTACGAAGA+CGG | + | chr3.4:95909991-95910010 | None:intergenic | 45.0% | |
| TTACCTGAATGCCGTGTTCA+AGG | + | chr3.4:95909752-95909771 | None:intergenic | 45.0% | |
| TTCGCTGAAGAACGTGTTGA+AGG | + | chr3.4:95909940-95909959 | None:intergenic | 45.0% | |
| TTGCAACCATCAAGACCAAG+AGG | - | chr3.4:95911057-95911076 | MS.gene69089:CDS | 45.0% | |
| TTTGTGTCCTTCAGTTGGGA+AGG | - | chr3.4:95910212-95910231 | MS.gene69089:CDS | 45.0% | |
| ! | CCATGTATTTTCCATGGCGA+GGG | + | chr3.4:95910983-95911002 | None:intergenic | 45.0% |
| ! | CGTACTGGTATAATGACCAC+GGG | + | chr3.4:95910108-95910127 | None:intergenic | 45.0% |
| ! | GGTTCTGACTTCGTCAATGA+CGG | + | chr3.4:95910015-95910034 | None:intergenic | 45.0% |
| ! | GTGCATTGGTATGTTGGTGA+GGG | - | chr3.4:95911275-95911294 | MS.gene69089:intron | 45.0% |
| ! | TAACTCTACCAGTGTTGCTG+AGG | - | chr3.4:95911199-95911218 | MS.gene69089:intron | 45.0% |
| ! | TGGTTTGGGTTCTCTTCTGT+TGG | - | chr3.4:95910338-95910357 | MS.gene69089:intron | 45.0% |
| ! | TGTGCATTGGTATGTTGGTG+AGG | - | chr3.4:95911274-95911293 | MS.gene69089:intron | 45.0% |
| ! | TTGGTATGTTGGTGAGGGTA+TGG | - | chr3.4:95911280-95911299 | MS.gene69089:intron | 45.0% |
| !! | AATGGTCCTCTTGGTCTTGA+TGG | + | chr3.4:95911066-95911085 | None:intergenic | 45.0% |
| !! | ACTGCCTCTTTGAGGTTTGA+TGG | - | chr3.4:95910777-95910796 | MS.gene69089:CDS | 45.0% |
| !! | CGATTGAGGTTGGTGTAAGT+GGG | + | chr3.4:95910564-95910583 | None:intergenic | 45.0% |
| !! | GCTTGTTGTTTGATGTACCG+CGG | - | chr3.4:95911002-95911021 | MS.gene69089:CDS | 45.0% |
| !! | GGTGATGGAGATGATGTTGA+TGG | - | chr3.4:95911380-95911399 | MS.gene69089:CDS | 45.0% |
| !!! | GGTGTTGTTTTTCAGCCTGA+TGG | - | chr3.4:95909873-95909892 | MS.gene69089:CDS | 45.0% |
| AAGGCAGTAAAGTTCCCAGC+AGG | + | chr3.4:95909733-95909752 | None:intergenic | 50.0% | |
| ACCACAGAGGTAGAAACCTG+GGG | + | chr3.4:95910423-95910442 | None:intergenic | 50.0% | |
| ACTGCAGCATTCACGTCCTT+AGG | + | chr3.4:95911038-95911057 | None:intergenic | 50.0% | |
| AGAGACAAGGCGATTGAGGT+TGG | + | chr3.4:95910574-95910593 | None:intergenic | 50.0% | |
| AGATCATGCACACAGCCCTT+TGG | + | chr3.4:95911178-95911197 | None:intergenic | 50.0% | |
| AGGGTCACACTTAGCCATCA+TGG | + | chr3.4:95910964-95910983 | None:intergenic | 50.0% | |
| AGTGTGCTCAAGGAGGGAAT+GGG | + | chr3.4:95910472-95910491 | None:intergenic | 50.0% | |
| ATACCGCACTTGAACCCAGT+TGG | + | chr3.4:95911107-95911126 | None:intergenic | 50.0% | |
| CAAACCTCAAAGAGGCAGTG+AGG | + | chr3.4:95910776-95910795 | None:intergenic | 50.0% | |
| CAACATCAGTGTGCTCAAGG+AGG | + | chr3.4:95910479-95910498 | None:intergenic | 50.0% | |
| CAACCACAGAGGTAGAAACC+TGG | + | chr3.4:95910425-95910444 | None:intergenic | 50.0% | |
| CACCAAGAAACCTTGCAGAC+CGG | + | chr3.4:95910289-95910308 | None:intergenic | 50.0% | |
| CACCCTGAACAACTCATCAG+CGG | - | chr3.4:95910056-95910075 | MS.gene69089:CDS | 50.0% | |
| CAGCAACATCAGTGTGCTCA+AGG | + | chr3.4:95910482-95910501 | None:intergenic | 50.0% | |
| CCAACTTGGTTCCTTACCCT+AGG | - | chr3.4:95910832-95910851 | MS.gene69089:CDS | 50.0% | |
| CCCTCGCCATGGAAAATACA+TGG | - | chr3.4:95910980-95910999 | MS.gene69089:CDS | 50.0% | |
| CCTAGGGTAAGGAACCAAGT+TGG | + | chr3.4:95910835-95910854 | None:intergenic | 50.0% | |
| CGGCAACAGAAAGCTGTTCA+TGG | + | chr3.4:95910911-95910930 | None:intergenic | 50.0% | |
| CTGACTTCGTCAATGACGGT+TGG | + | chr3.4:95910011-95910030 | None:intergenic | 50.0% | |
| GAAGAGTTGACGGTAAGCAC+CGG | + | chr3.4:95910036-95910055 | None:intergenic | 50.0% | |
| GCCTTCTCAGCAGAGATAAC+AGG | + | chr3.4:95910885-95910904 | None:intergenic | 50.0% | |
| GGAAAACACCTCAGCAACAC+TGG | + | chr3.4:95911210-95911229 | None:intergenic | 50.0% | |
| GGAAGAAGGTGAGTTCTCTG+AGG | - | chr3.4:95911301-95911320 | MS.gene69089:intron | 50.0% | |
| GTGATCTTGCCAAGGTCCAA+AGG | - | chr3.4:95911159-95911178 | MS.gene69089:CDS | 50.0% | |
| GTTCAGGGTGGAAGAGTTGA+CGG | + | chr3.4:95910046-95910065 | None:intergenic | 50.0% | |
| GTTGTAGGGTTCAACCACAG+AGG | + | chr3.4:95910436-95910455 | None:intergenic | 50.0% | |
| TACCGGTCTGCAAGGTTTCT+TGG | - | chr3.4:95910284-95910303 | MS.gene69089:CDS | 50.0% | |
| TACCGTTTATCCATCTCCCC+AGG | - | chr3.4:95910404-95910423 | MS.gene69089:intron | 50.0% | |
| TCACCACCAGGAACAACAGT+TGG | + | chr3.4:95911143-95911162 | None:intergenic | 50.0% | |
| TGCCGCTGATGAGTTGTTCA+GGG | + | chr3.4:95910061-95910080 | None:intergenic | 50.0% | |
| TGTCCAACTGGGTTCAAGTG+CGG | - | chr3.4:95911101-95911120 | MS.gene69089:CDS | 50.0% | |
| TTGCCGCTGATGAGTTGTTC+AGG | + | chr3.4:95910062-95910081 | None:intergenic | 50.0% | |
| ! | CCAAGCGTGCTTTTGTGCAT+TGG | - | chr3.4:95911261-95911280 | MS.gene69089:intron | 50.0% |
| ! | CCAATGCACAAAAGCACGCT+TGG | + | chr3.4:95911264-95911283 | None:intergenic | 50.0% |
| ! | CTAGCTTTCGGATCCTATCG+AGG | + | chr3.4:95910254-95910273 | None:intergenic | 50.0% |
| ! | GATAACTGTACCGGTCTGCA+AGG | - | chr3.4:95910276-95910295 | MS.gene69089:CDS | 50.0% |
| ! | GCCATGTATTTTCCATGGCG+AGG | + | chr3.4:95910984-95911003 | None:intergenic | 50.0% |
| ! | GTTGGTGAGGGTATGGAAGA+AGG | - | chr3.4:95911287-95911306 | MS.gene69089:intron | 50.0% |
| ! | TTGGTGTTCAATGCTGTGGG+TGG | - | chr3.4:95910303-95910322 | MS.gene69089:CDS | 50.0% |
| !! | CAAGGAGGGAATGGGTTGAA+AGG | + | chr3.4:95910464-95910483 | None:intergenic | 50.0% |
| !! | GCGATTGAGGTTGGTGTAAG+TGG | + | chr3.4:95910565-95910584 | None:intergenic | 50.0% |
| !! | GTGTTGCTGAGGTGTTTTCC+AGG | - | chr3.4:95911210-95911229 | MS.gene69089:intron | 50.0% |
| ACCTTGGCAAGATCACCACC+AGG | + | chr3.4:95911155-95911174 | None:intergenic | 55.0% | |
| ATGACCACGGGCGAAGTTGT+TGG | + | chr3.4:95910096-95910115 | None:intergenic | 55.0% | |
| ATGCCTGGAGACAAGACCGT+TGG | - | chr3.4:95909900-95909919 | MS.gene69089:CDS | 55.0% | |
| CAGCCTCCAACTGTTGTTCC+TGG | - | chr3.4:95911134-95911153 | MS.gene69089:CDS | 55.0% | |
| CAGGAACAACAGTTGGAGGC+TGG | + | chr3.4:95911136-95911155 | None:intergenic | 55.0% | |
| CAGTGTGCTCAAGGAGGGAA+TGG | + | chr3.4:95910473-95910492 | None:intergenic | 55.0% | |
| CATCCCTCACTGCCTCTTTG+AGG | - | chr3.4:95910769-95910788 | MS.gene69089:CDS | 55.0% | |
| CATTGGTCAAGCCGGTATCC+AGG | - | chr3.4:95909698-95909717 | MS.gene69089:CDS | 55.0% | |
| CCACCAGGAACAACAGTTGG+AGG | + | chr3.4:95911140-95911159 | None:intergenic | 55.0% | |
| CCTCAATCGCCTTGTCTCTC+AGG | - | chr3.4:95910575-95910594 | MS.gene69089:CDS | 55.0% | |
| CCTCCAACTGTTGTTCCTGG+TGG | - | chr3.4:95911137-95911156 | MS.gene69089:CDS | 55.0% | |
| CCTGAGAGACAAGGCGATTG+AGG | + | chr3.4:95910578-95910597 | None:intergenic | 55.0% | |
| CCTTAGGCACAACATCACCG+CGG | + | chr3.4:95911022-95911041 | None:intergenic | 55.0% | |
| CGCTGATGAGTTGTTCAGGG+TGG | + | chr3.4:95910058-95910077 | None:intergenic | 55.0% | |
| CTGCCTTGAACACGGCATTC+AGG | - | chr3.4:95909746-95909765 | MS.gene69089:CDS | 55.0% | |
| GAGGTAGAAACCTGGGGAGA+TGG | + | chr3.4:95910417-95910436 | None:intergenic | 55.0% | |
| GGATCTTGCTGCTCTCGAGA+AGG | - | chr3.4:95911331-95911350 | MS.gene69089:CDS | 55.0% | |
| GGCATCATCTCCTCCTCCAA+CGG | + | chr3.4:95909919-95909938 | None:intergenic | 55.0% | |
| GGCATTTCCGACCTGGATAC+CGG | + | chr3.4:95909712-95909731 | None:intergenic | 55.0% | |
| GTGTTCAATGCTGTGGGTGG+TGG | - | chr3.4:95910306-95910325 | MS.gene69089:CDS | 55.0% | |
| TCCCCAGGTTTCTACCTCTG+TGG | - | chr3.4:95910419-95910438 | MS.gene69089:intron | 55.0% | |
| TGGAACATGCTTTCCGGCAC+CGG | + | chr3.4:95909964-95909983 | None:intergenic | 55.0% | |
| TGGTGGAACCGGATCTGGTT+TGG | - | chr3.4:95910323-95910342 | MS.gene69089:intron | 55.0% | |
| TTCTTCAGCGAAACCGGTGC+CGG | - | chr3.4:95909948-95909967 | MS.gene69089:CDS | 55.0% | |
| ! | GGTGGAACCGGATCTGGTTT+GGG | - | chr3.4:95910324-95910343 | MS.gene69089:intron | 55.0% |
| ! | TCCTGGTGGTGATCTTGCCA+AGG | - | chr3.4:95911151-95911170 | MS.gene69089:CDS | 55.0% |
| !! | AATGCTGTGGGTGGTGGAAC+CGG | - | chr3.4:95910312-95910331 | MS.gene69089:CDS | 55.0% |
| !! | GGATACCGGCTTGACCAATG+TGG | + | chr3.4:95909698-95909717 | None:intergenic | 55.0% |
| !! | GTTGGTGCTGAGTCTGGTGA+TGG | - | chr3.4:95911365-95911384 | MS.gene69089:CDS | 55.0% |
| !! | TGAGTTCTCTGAGGCTCGTG+AGG | - | chr3.4:95911310-95911329 | MS.gene69089:intron | 55.0% |
| ACCACGGGCGAAGTTGTTGG+CGG | + | chr3.4:95910093-95910112 | None:intergenic | 60.0% | |
| ACGCGCCGTCTTCGTAGATC+TGG | - | chr3.4:95909983-95910002 | MS.gene69089:CDS | 60.0% | |
| AGATCTACGAAGACGGCGCG+TGG | + | chr3.4:95909984-95910003 | None:intergenic | 60.0% | |
| CCAGGTCGGAAATGCCTGCT+GGG | - | chr3.4:95909716-95909735 | MS.gene69089:CDS | 60.0% | |
| CCGCGGTGATGTTGTGCCTA+AGG | - | chr3.4:95911019-95911038 | MS.gene69089:CDS | 60.0% | |
| CCTGGAGACAAGACCGTTGG+AGG | - | chr3.4:95909903-95909922 | MS.gene69089:CDS | 60.0% | |
| GCACACAGCCCTTTGGACCT+TGG | + | chr3.4:95911171-95911190 | None:intergenic | 60.0% | |
| GCTAAGTGTGACCCTCGCCA+TGG | - | chr3.4:95910969-95910988 | MS.gene69089:intron | 60.0% | |
| GGAGACAAGACCGTTGGAGG+AGG | - | chr3.4:95909906-95909925 | MS.gene69089:CDS | 60.0% | |
| GGCGCGTGGAACATGCTTTC+CGG | + | chr3.4:95909970-95909989 | None:intergenic | 60.0% | |
| GGTCAAGCCGGTATCCAGGT+CGG | - | chr3.4:95909702-95909721 | MS.gene69089:CDS | 60.0% | |
| TCCAGGTCGGAAATGCCTGC+TGG | - | chr3.4:95909715-95909734 | MS.gene69089:CDS | 60.0% | |
| TCTCCAGGCATCTGGCCATC+AGG | + | chr3.4:95909891-95909910 | None:intergenic | 60.0% | |
| ! | CCTCCAACGGTCTTGTCTCC+AGG | + | chr3.4:95909906-95909925 | None:intergenic | 60.0% |
| ! | CGGTCTTGTCTCCAGGCATC+TGG | + | chr3.4:95909899-95909918 | None:intergenic | 60.0% |
| !! | GAGGAGGTTGGTGCTGAGTC+TGG | - | chr3.4:95911359-95911378 | MS.gene69089:CDS | 60.0% |
| CAGCCTGATGGCCAGATGCC+TGG | - | chr3.4:95909885-95909904 | MS.gene69089:CDS | 65.0% | |
| CCCAGCAGGCATTTCCGACC+TGG | + | chr3.4:95909719-95909738 | None:intergenic | 65.0% | |
| !! | GTGGGTGGTGGAACCGGATC+TGG | - | chr3.4:95910318-95910337 | MS.gene69089:intron | 65.0% |
| GCCGCCAACAACTTCGCCCG+TGG | - | chr3.4:95910089-95910108 | MS.gene69089:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 95909675 | 95911418 | 95909675 | ID=MS.gene69089 |
| chr3.4 | mRNA | 95909675 | 95911418 | 95909675 | ID=MS.gene69089.t1;Parent=MS.gene69089 |
| chr3.4 | exon | 95911326 | 95911418 | 95911326 | ID=MS.gene69089.t1.exon1;Parent=MS.gene69089.t1 |
| chr3.4 | CDS | 95911326 | 95911418 | 95911326 | ID=cds.MS.gene69089.t1;Parent=MS.gene69089.t1 |
| chr3.4 | exon | 95910971 | 95911205 | 95910971 | ID=MS.gene69089.t1.exon2;Parent=MS.gene69089.t1 |
| chr3.4 | CDS | 95910971 | 95911205 | 95910971 | ID=cds.MS.gene69089.t1;Parent=MS.gene69089.t1 |
| chr3.4 | exon | 95910497 | 95910867 | 95910497 | ID=MS.gene69089.t1.exon3;Parent=MS.gene69089.t1 |
| chr3.4 | CDS | 95910497 | 95910867 | 95910497 | ID=cds.MS.gene69089.t1;Parent=MS.gene69089.t1 |
| chr3.4 | exon | 95909675 | 95910331 | 95909675 | ID=MS.gene69089.t1.exon4;Parent=MS.gene69089.t1 |
| chr3.4 | CDS | 95909675 | 95910331 | 95909675 | ID=cds.MS.gene69089.t1;Parent=MS.gene69089.t1 |
| Gene Sequence |
| Protein sequence |
